RLG00000020304

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000089
Physical Location & Seq
Reverse (-)
63455053 .. 63460606
5554 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020304

Sequence Viewer

Length: 1176 bp
ATGGGTGGAGGAGAGACCTCAAAACAAGGTGGAAAGAAAGCCAAAAGGCAGGAAATAGCTGCACGAGCAACTCTTCTGCTTAGGGAAAAAAGGAATGAATCCTTAAGAATATCTAATGGAAATTCAAATTCATCCCCTATAGAAGTTGATATTCCGGAATGTCAAGCTACATCAAACTCAGGAAAGAAAAAAATTCCACCTCGGGTTGAATTCAATGAAAGAGGCCAGCCCATTGGAGAAAATGCAAGTATATTCTCTTCTTTCATTGGAGCCTCAGCAAGAGAACTAATACCAATGACCGCTGGAACTTGGAAAGATCTATCTAATACTTTCAAAGATCAGATTTGGAAACACGTCACAACAACGTTCGTTGTTGATGAATTCTACAAGAAGCATATTTTTCGAAGGATGACGAAACTTTGGCGAGATAATAGATCTTTAGTGATGAAAGAAGTGGAAGAGCAAGCCAAAGTTGTTGGTTTACAGTGTGCTTCTGCAATTCTCAAGCCTAATAACATAGAATCCATGGATGAGTGGTTAGCTCTTATTAAACACAGAACTAGTGTGGGATTTAAGGAGAAGTGTCAAAAATTCAAGAGAATGCGGGCAGGAAGAACTTTACTACATAGAACTAGTAGAAAAAGTTTTGCGCGCCTTGAAGAAGAATTGAAGGAACAAAGTGAAAATCCAGATGTGATATCAAGGTCTGATATATGGATACATGCTTATGAAGCAAAGAAGAAGAGTTCAGATGAAGTAGTTGAGGATCCAGAAATAGTGGTCTCTATACTCTTCTTTATGGCTCATCTTTTGAAACAAGTGAAGCAGAAAAGGGCAGAGCAAGAACCTTCACAAACATCTTCTTTGAAAGATGATGTTGTAGCACAAGTTCTAGGACCTGATCCACGAGGACGGAAAATTGTAAAAGCAAAGAGAAACAAGACAGTAGGCCAGCACCACAAGATCCAAGAGATCATCAAGAGCTTTTCAAAAGAGTACAAGAAAAGTGCCAGCTTTGCTTGGGTTTTCAGTGACCTTTATATAGTGTCAGTCATGCATAGCTCAAAAATGCTTCAGATTGAGACGGTTCAATGTTATATTCAGCCAGCTGGTTCACTTATATCCACAGCACCTGTTTCAAACTCCACATTCCCCAGTCCCAGTACCACTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

392

Amino Acids

44.24

Weight (kDa)

9.71

Isoelectric Point (pI)

48.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 177 - 305 1.4e-11 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 652
AccIII TCCGGA 1 cut(s) 154
AciI CCGC 2 cut(s) 300, 604
AclI AACGTT 1 cut(s) 365
AclWI GGATC 4 cut(s) 761, 774, 896, 958
AcsI RAATTY 6 cut(s) 121, 127, 192, 209, 380, 590
AcuI CTGAAG 1 cut(s) 1058
AfaI GTAC 2 cut(s) 998, 1165
AflII CTTAAG 1 cut(s) 103
AflIII ACRYGT 1 cut(s) 352
AhlI ACTAGT 2 cut(s) 560, 632
AjiI CACGTC 1 cut(s) 355
AluBI AGCT 7 cut(s) 59, 167, 542, 984, 1014, 1062, 1109
AluI AGCT 7 cut(s) 59, 167, 542, 984, 1014, 1062, 1109
Alw26I GTCTC 3 cut(s) 8, 787, 1076
AlwI GGATC 4 cut(s) 761, 774, 896, 958
AlwNI CAGNNNCTG 1 cut(s) 1133
Ama87I CYCGRG 1 cut(s) 201
Aor13HI TCCGGA 1 cut(s) 154
AoxI GGCC 2 cut(s) 223, 949
ApeKI GCWGC 1 cut(s) 59
ApoI RAATTY 6 cut(s) 121, 127, 192, 209, 380, 590
AspLEI GCGC 2 cut(s) 652, 654
AspS9I GGNCC 1 cut(s) 896
AsuII TTCGAA 1 cut(s) 403
AvaI CYCGRG 1 cut(s) 201
AvaII GGWCC 1 cut(s) 896
BamHI GGATCC 1 cut(s) 766
BarI GAAGNNNNNNTAC 2 cut(s) 241, 273
BauI CACGAG 2 cut(s) 63, 906
BbvCI CCTCAGC 1 cut(s) 274
BbvI GCAGC 1 cut(s) 46
BcgI CGANNNNNNTGC 2 cut(s) 383, 417
BciVI GTATCC 1 cut(s) 711
BcoDI GTCTC 3 cut(s) 8, 787, 1076
BcuI ACTAGT 2 cut(s) 560, 632
BfaI CTAG 3 cut(s) 561, 633, 893
BfmI CTRYAG 1 cut(s) 138
BfrI CTTAAG 1 cut(s) 103
BfuI GTATCC 1 cut(s) 711
BglII AGATCT 2 cut(s) 316, 434
BisI GCNGC 1 cut(s) 60
BlsI GCNGC 1 cut(s) 61
Bme18I GGWCC 1 cut(s) 896
BmeT110I CYCGRG 1 cut(s) 201
BmgBI CACGTC 1 cut(s) 355
BmgT120I GGNCC 1 cut(s) 896
BmiI GGNNCC 2 cut(s) 271, 768
BmrI ACTGGG 2 cut(s) 1149, 1155
BmuI ACTGGG 2 cut(s) 1149, 1155
Bpu10I CCTNAGC 2 cut(s) 80, 274
Bpu14I TTCGAA 1 cut(s) 403
BpuEI CTTGAG 1 cut(s) 488
BsaI GGTCTC 2 cut(s) 8, 787
BsaJI CCNNGG 2 cut(s) 200, 525
BsaWI WCCGGW 1 cut(s) 154
Bse1I ACTGG 2 cut(s) 1155, 1161
BseAI TCCGGA 1 cut(s) 154
BseDI CCNNGG 2 cut(s) 200, 525
BseGI GGATG 3 cut(s) 131, 414, 535
BseMII CTCAG 2 cut(s) 192, 288
BseNI ACTGG 2 cut(s) 1155, 1161
BsePI GCGCGC 1 cut(s) 650
BseRI GAGGAG 1 cut(s) 24
BseXI GCAGC 1 cut(s) 46
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 1 cut(s) 652
BshFI GGCC 2 cut(s) 225, 951
BsiHKCI CYCGRG 1 cut(s) 201
BsiSI CCGG 1 cut(s) 155
BslFI GGGAC 1 cut(s) 1143
BsmAI GTCTC 3 cut(s) 8, 787, 1076
BsmBI CGTCTC 1 cut(s) 1076
BsmFI GGGAC 1 cut(s) 1143
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 2 cut(s) 225, 951
Bso31I GGTCTC 2 cut(s) 8, 787
BsoBI CYCGRG 1 cut(s) 201
Bsp119I TTCGAA 1 cut(s) 403
Bsp13I TCCGGA 1 cut(s) 154
Bsp143I GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
Bsp19I CCATGG 1 cut(s) 525
BspACI CCGC 2 cut(s) 300, 604
BspANI GGCC 2 cut(s) 225, 951
BspCNI CTCAG 2 cut(s) 191, 287
BspEI TCCGGA 1 cut(s) 154
BspFNI CGCG 1 cut(s) 652
BspLI GGNNCC 2 cut(s) 271, 768
BspPI GGATC 4 cut(s) 761, 774, 896, 958
BspQI GCTCTTC 1 cut(s) 453
BspT104I TTCGAA 1 cut(s) 403
BspTI CTTAAG 1 cut(s) 103
BspTNI GGTCTC 2 cut(s) 8, 787
BsrI ACTGG 2 cut(s) 1155, 1161
BssECI CCNNGG 2 cut(s) 200, 525
BssHII GCGCGC 1 cut(s) 650
BssMI GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
BssSI CACGAG 2 cut(s) 63, 906
BssT1I CCWWGG 1 cut(s) 525
Bst2BI CACGAG 2 cut(s) 63, 906
Bst4CI ACNGT 3 cut(s) 486, 946, 1087
Bst6I CTCTTC 5 cut(s) 78, 262, 453, 737, 797
BstAFI CTTAAG 1 cut(s) 103
BstBI TTCGAA 1 cut(s) 403
BstC8I GCNNGC 7 cut(s) 227, 465, 606, 652, 953, 1012, 1107
BstDEI CTNAG 3 cut(s) 80, 178, 274
BstDSI CCRYGG 1 cut(s) 525
BstF5I GGATG 3 cut(s) 131, 414, 535
BstFNI CGCG 1 cut(s) 652
BstHHI GCGC 2 cut(s) 652, 654
BstKTI GATC 7 cut(s) 319, 340, 437, 769, 904, 966, 975
BstMAI GTCTC 3 cut(s) 8, 787, 1076
BstMBI GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
BstMWI GCNNNNNNNGC 3 cut(s) 65, 731, 1016
BstNSI RCATGY 1 cut(s) 725
BstSFI CTRYAG 1 cut(s) 138
BstUI CGCG 1 cut(s) 652
BstV1I GCAGC 1 cut(s) 46
BstX2I RGATCY 4 cut(s) 316, 434, 766, 963
BstXI CCANNNNNNTGG 1 cut(s) 233
BstYI RGATCY 4 cut(s) 316, 434, 766, 963
BsuI GTATCC 1 cut(s) 711
BsuRI GGCC 2 cut(s) 225, 951
BtgI CCRYGG 1 cut(s) 525
BtrI CACGTC 1 cut(s) 355
BtsCI GGATG 3 cut(s) 131, 414, 535
BtsI GCAGTG 1 cut(s) 1167
BtsIMutI CAGTG 3 cut(s) 491, 1036, 1167
Cac8I GCNNGC 7 cut(s) 227, 465, 606, 652, 953, 1012, 1107
CaiI CAGNNNCTG 1 cut(s) 1133
CfoI GCGC 2 cut(s) 652, 654
Cfr13I GGNCC 1 cut(s) 896
Csp6I GTAC 2 cut(s) 997, 1164
CviAII CATG 3 cut(s) 526, 722, 1054
CviQI GTAC 2 cut(s) 997, 1164
DdeI CTNAG 3 cut(s) 80, 178, 274
DpnI GATC 7 cut(s) 318, 339, 436, 768, 903, 965, 974
DpnII GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
Eam1104I CTCTTC 5 cut(s) 78, 262, 453, 737, 797
EarI CTCTTC 5 cut(s) 78, 262, 453, 737, 797
Eco130I CCWWGG 1 cut(s) 525
Eco31I GGTCTC 2 cut(s) 8, 787
Eco32I GATATC 1 cut(s) 699
Eco47I GGWCC 1 cut(s) 896
Eco57I CTGAAG 1 cut(s) 1058
Eco88I CYCGRG 1 cut(s) 201
EcoO109I RGGNCCY 1 cut(s) 896
EcoRI GAATTC 2 cut(s) 209, 380
EcoRV GATATC 1 cut(s) 699
EcoT14I CCWWGG 1 cut(s) 525
EcoT22I ATGCAT 1 cut(s) 1059
ErhI CCWWGG 1 cut(s) 525
Esp3I CGTCTC 1 cut(s) 1076
FaeI CATG 3 cut(s) 529, 725, 1057
FaqI GGGAC 1 cut(s) 1143
FatI CATG 3 cut(s) 525, 721, 1053
FauI CCCGC 1 cut(s) 597
Fnu4HI GCNGC 1 cut(s) 60
FokI GGATG 3 cut(s) 118, 421, 542
Fsp4HI GCNGC 1 cut(s) 60
FspBI CTAG 3 cut(s) 561, 633, 893
GlaI GCGC 2 cut(s) 651, 653
GluI GCNGC 1 cut(s) 60
HaeIII GGCC 2 cut(s) 225, 951
HapII CCGG 1 cut(s) 155
HhaI GCGC 2 cut(s) 652, 654
Hin1II CATG 3 cut(s) 529, 725, 1057
Hin6I GCGC 2 cut(s) 650, 652
HinP1I GCGC 2 cut(s) 650, 652
HinfI GANTC 2 cut(s) 98, 521
HpaII CCGG 1 cut(s) 155
Hpy166II GTNNAC 2 cut(s) 482, 1115
Hpy188I TCNGA 4 cut(s) 342, 709, 751, 1077
Hpy188III TCNNGA 6 cut(s) 155, 180, 595, 689, 770, 979
Hpy8I GTNNAC 2 cut(s) 482, 1115
HpyAV CCTTC 3 cut(s) 399, 664, 858
HpyCH4III ACNGT 3 cut(s) 486, 946, 1087
HpyCH4IV ACGT 2 cut(s) 354, 365
HpyCH4V TGCA 4 cut(s) 62, 245, 497, 1057
HpyF10VI GCNNNNNNNGC 3 cut(s) 65, 731, 1016
HpyF3I CTNAG 3 cut(s) 80, 178, 274
HpySE526I ACGT 2 cut(s) 354, 365
Hsp92II CATG 3 cut(s) 529, 725, 1057
HspAI GCGC 2 cut(s) 650, 652
Kpn2I TCCGGA 1 cut(s) 154
Kzo9I GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
LguI GCTCTTC 1 cut(s) 453
LmnI GCTCC 1 cut(s) 269
Lsp1109I GCAGC 1 cut(s) 46
MaeI CTAG 3 cut(s) 561, 633, 893
MaeII ACGT 2 cut(s) 354, 365
MaeIII GTNAC 2 cut(s) 355, 1031
MalI GATC 7 cut(s) 318, 339, 436, 768, 903, 965, 974
MboI GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
MflI RGATCY 4 cut(s) 316, 434, 766, 963
MluCI AATT 9 cut(s) 121, 127, 192, 209, 380, 498, 590, 665, 918
MnlI CCTC 6 cut(s) 28, 210, 215, 283, 757, 902
Mph1103I ATGCAT 1 cut(s) 1059
MroI TCCGGA 1 cut(s) 154
MseI TTAA 3 cut(s) 104, 549, 573
MslI CAYNNNNRTG 1 cut(s) 726
MspA1I CMGCKG 2 cut(s) 302, 1109
MspCI CTTAAG 1 cut(s) 103
MspI CCGG 1 cut(s) 155
Mva1269I GAATGC 1 cut(s) 606
MvnI CGCG 1 cut(s) 652
MwoI GCNNNNNNNGC 3 cut(s) 65, 731, 1016
NcoI CCATGG 1 cut(s) 525
NdeII GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
NlaIII CATG 3 cut(s) 529, 725, 1057
NlaIV GGNNCC 2 cut(s) 271, 768
NmuCI GTSAC 2 cut(s) 355, 1031
NsiI ATGCAT 1 cut(s) 1059
NspI RCATGY 1 cut(s) 725
NspV TTCGAA 1 cut(s) 403
PauI GCGCGC 1 cut(s) 650
PciSI GCTCTTC 1 cut(s) 453
PctI GAATGC 1 cut(s) 606
PfeI GAWTC 2 cut(s) 98, 521
PkrI GCNGC 1 cut(s) 61
PpuMI RGGWCCY 1 cut(s) 896
Psp1406I AACGTT 1 cut(s) 365
Psp5II RGGWCCY 1 cut(s) 896
PspN4I GGNNCC 2 cut(s) 271, 768
PspPI GGNCC 1 cut(s) 896
PspPPI RGGWCCY 1 cut(s) 896
PsrI GAACNNNNNNTAC 2 cut(s) 873, 905
PstNI CAGNNNCTG 1 cut(s) 1133
PsuI RGATCY 4 cut(s) 316, 434, 766, 963
PteI GCGCGC 1 cut(s) 650
PvuII CAGCTG 1 cut(s) 1109
RsaI GTAC 2 cut(s) 998, 1165
RsaNI GTAC 2 cut(s) 997, 1164
RseI CAYNNNNRTG 1 cut(s) 726
SapI GCTCTTC 1 cut(s) 453
SaqAI TTAA 3 cut(s) 104, 549, 573
SatI GCNGC 1 cut(s) 60
Sau3AI GATC 7 cut(s) 316, 337, 434, 766, 901, 963, 972
Sau96I GGNCC 1 cut(s) 896
SfcI CTRYAG 1 cut(s) 138
SfuI TTCGAA 1 cut(s) 403
SinI GGWCC 1 cut(s) 896
SmiMI CAYNNNNRTG 1 cut(s) 726
SmlI CTYRAG 2 cut(s) 103, 503
SmoI CTYRAG 2 cut(s) 103, 503
SpeI ACTAGT 2 cut(s) 560, 632
Sse9I AATT 9 cut(s) 121, 127, 192, 209, 380, 498, 590, 665, 918
SsiI CCGC 2 cut(s) 300, 604
SspMI CTAG 3 cut(s) 561, 633, 893
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 3 cut(s) 486, 946, 1087
TaiI ACGT 2 cut(s) 357, 368
TaqI TCGA 1 cut(s) 403
TasI AATT 9 cut(s) 121, 127, 192, 209, 380, 498, 590, 665, 918
TatI WGTACW 1 cut(s) 996
TfiI GAWTC 2 cut(s) 98, 521
Tru1I TTAA 3 cut(s) 104, 549, 573
Tru9I TTAA 3 cut(s) 104, 549, 573
TscAI CASTG 3 cut(s) 491, 1036, 1174
TseFI GTSAC 2 cut(s) 355, 1031
TseI GCWGC 1 cut(s) 59
Tsp45I GTSAC 2 cut(s) 355, 1031
TspDTI ATGAA 8 cut(s) 111, 120, 231, 253, 393, 461, 744, 768
TspGWI ACGGA 1 cut(s) 928
TspRI CASTG 3 cut(s) 491, 1036, 1174
Vha464I CTTAAG 1 cut(s) 103
VpaK11BI GGWCC 1 cut(s) 896
XapI RAATTY 6 cut(s) 121, 127, 192, 209, 380, 590
XceI RCATGY 1 cut(s) 725
XspI CTAG 3 cut(s) 561, 633, 893
Zsp2I ATGCAT 1 cut(s) 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.