isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 495, 842 |
| AcsI | RAATTY | 3 cut(s) | 202, 275, 635 |
| AcuI | CTGAAG | 2 cut(s) | 555, 651 |
| AcvI | CACGTG | 1 cut(s) | 554 |
| AfaI | GTAC | 2 cut(s) | 773, 837 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 221 |
| AgsI | TTSAA | 4 cut(s) | 269, 275, 280, 591 |
| AluBI | AGCT | 2 cut(s) | 533, 737 |
| AluI | AGCT | 2 cut(s) | 533, 737 |
| Alw26I | GTCTC | 2 cut(s) | 5, 182 |
| AlwI | GGATC | 2 cut(s) | 495, 842 |
| Ama87I | CYCGRG | 1 cut(s) | 852 |
| AoxI | GGCC | 1 cut(s) | 212 |
| ApeKI | GCWGC | 3 cut(s) | 65, 311, 557 |
| ApoI | RAATTY | 3 cut(s) | 202, 275, 635 |
| AspA2I | CCTAGG | 1 cut(s) | 218 |
| AspS9I | GGNCC | 2 cut(s) | 800, 842 |
| AsuII | TTCGAA | 1 cut(s) | 469 |
| AvaI | CYCGRG | 1 cut(s) | 852 |
| AvaII | GGWCC | 2 cut(s) | 800, 842 |
| AvrII | CCTAGG | 1 cut(s) | 218 |
| BbrPI | CACGTG | 1 cut(s) | 554 |
| BbsI | GAAGAC | 1 cut(s) | 798 |
| BbvI | GCAGC | 3 cut(s) | 52, 323, 544 |
| BccI | CCATC | 1 cut(s) | 517 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 449, 483 |
| BcoDI | GTCTC | 2 cut(s) | 5, 182 |
| BfaI | CTAG | 3 cut(s) | 219, 285, 621 |
| BisI | GCNGC | 3 cut(s) | 66, 312, 558 |
| BlnI | CCTAGG | 1 cut(s) | 218 |
| BlsI | GCNGC | 3 cut(s) | 67, 313, 559 |
| BmcAI | AGTACT | 1 cut(s) | 837 |
| Bme18I | GGWCC | 2 cut(s) | 800, 842 |
| BmeT110I | CYCGRG | 1 cut(s) | 852 |
| BmgT120I | GGNCC | 2 cut(s) | 800, 842 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmsI | GCATC | 3 cut(s) | 109, 655, 811 |
| BpiI | GAAGAC | 1 cut(s) | 798 |
| Bpu14I | TTCGAA | 1 cut(s) | 469 |
| BsaAI | YACGTR | 1 cut(s) | 554 |
| BsaI | GGTCTC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 4 cut(s) | 173, 218, 331, 853 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 221 |
| BseDI | CCNNGG | 4 cut(s) | 173, 218, 331, 853 |
| BseGI | GGATG | 2 cut(s) | 124, 670 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 221 |
| BseMII | CTCAG | 1 cut(s) | 720 |
| BseRI | GAGGAG | 1 cut(s) | 611 |
| BseXI | GCAGC | 3 cut(s) | 52, 323, 544 |
| BshFI | GGCC | 1 cut(s) | 214 |
| BsiHKCI | CYCGRG | 1 cut(s) | 852 |
| BsiSI | CCGG | 2 cut(s) | 8, 662 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 221 |
| BsmAI | GTCTC | 2 cut(s) | 5, 182 |
| BsnI | GGCC | 1 cut(s) | 214 |
| Bso31I | GGTCTC | 1 cut(s) | 5 |
| BsoBI | CYCGRG | 1 cut(s) | 852 |
| Bsp119I | TTCGAA | 1 cut(s) | 469 |
| Bsp143I | GATC | 3 cut(s) | 493, 500, 847 |
| BspANI | GGCC | 1 cut(s) | 214 |
| BspCNI | CTCAG | 1 cut(s) | 721 |
| BspHI | TCATGA | 1 cut(s) | 442 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 2 cut(s) | 495, 842 |
| BspT104I | TTCGAA | 1 cut(s) | 469 |
| BspTNI | GGTCTC | 1 cut(s) | 5 |
| BssECI | CCNNGG | 4 cut(s) | 173, 218, 331, 853 |
| BssMI | GATC | 3 cut(s) | 493, 500, 847 |
| BssT1I | CCWWGG | 3 cut(s) | 173, 218, 331 |
| Bst4CI | ACNGT | 3 cut(s) | 367, 583, 804 |
| BstBAI | YACGTR | 1 cut(s) | 554 |
| BstBI | TTCGAA | 1 cut(s) | 469 |
| BstC8I | GCNNGC | 1 cut(s) | 316 |
| BstDEI | CTNAG | 2 cut(s) | 207, 729 |
| BstF5I | GGATG | 2 cut(s) | 124, 670 |
| BstKTI | GATC | 3 cut(s) | 496, 503, 850 |
| BstMAI | GTCTC | 2 cut(s) | 5, 182 |
| BstMBI | GATC | 3 cut(s) | 493, 500, 847 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 74, 704 |
| BstV1I | GCAGC | 3 cut(s) | 52, 323, 544 |
| BstV2I | GAAGAC | 1 cut(s) | 798 |
| BstX2I | RGATCY | 2 cut(s) | 500, 847 |
| BstYI | RGATCY | 2 cut(s) | 500, 847 |
| BsuRI | GGCC | 1 cut(s) | 214 |
| BtsCI | GGATG | 2 cut(s) | 124, 670 |
| BtsIMutI | CAGTG | 1 cut(s) | 627 |
| Cac8I | GCNNGC | 1 cut(s) | 316 |
| CciI | TCATGA | 1 cut(s) | 442 |
| Cfr13I | GGNCC | 2 cut(s) | 800, 842 |
| Csp6I | GTAC | 2 cut(s) | 772, 836 |
| CviAII | CATG | 2 cut(s) | 424, 443 |
| CviJI | RGCY | 8 cut(s) | 7, 214, 295, 318, 533, 546, 691, 737 |
| CviKI_1 | RGCY | 8 cut(s) | 7, 214, 295, 318, 533, 546, 691, 737 |
| CviQI | GTAC | 2 cut(s) | 772, 836 |
| DdeI | CTNAG | 2 cut(s) | 207, 729 |
| DpnI | GATC | 3 cut(s) | 495, 502, 849 |
| DpnII | GATC | 3 cut(s) | 493, 500, 847 |
| Eco130I | CCWWGG | 3 cut(s) | 173, 218, 331 |
| Eco147I | AGGCCT | 1 cut(s) | 214 |
| Eco31I | GGTCTC | 1 cut(s) | 5 |
| Eco32I | GATATC | 1 cut(s) | 142 |
| Eco47I | GGWCC | 2 cut(s) | 800, 842 |
| Eco57I | CTGAAG | 2 cut(s) | 555, 651 |
| Eco72I | CACGTG | 1 cut(s) | 554 |
| Eco88I | CYCGRG | 1 cut(s) | 852 |
| EcoRI | GAATTC | 1 cut(s) | 275 |
| EcoRV | GATATC | 1 cut(s) | 142 |
| EcoT14I | CCWWGG | 3 cut(s) | 173, 218, 331 |
| ErhI | CCWWGG | 3 cut(s) | 173, 218, 331 |
| FaeI | CATG | 2 cut(s) | 427, 446 |
| FatI | CATG | 2 cut(s) | 423, 442 |
| Fnu4HI | GCNGC | 3 cut(s) | 66, 312, 558 |
| FokI | GGATG | 2 cut(s) | 131, 677 |
| Fsp4HI | GCNGC | 3 cut(s) | 66, 312, 558 |
| FspBI | CTAG | 3 cut(s) | 219, 285, 621 |
| GluI | GCNGC | 3 cut(s) | 66, 312, 558 |
| HaeIII | GGCC | 1 cut(s) | 214 |
| HapII | CCGG | 2 cut(s) | 8, 662 |
| Hin1II | CATG | 2 cut(s) | 427, 446 |
| HincII | GTYRAC | 1 cut(s) | 726 |
| HindII | GTYRAC | 1 cut(s) | 726 |
| HinfI | GANTC | 4 cut(s) | 125, 336, 587, 743 |
| HpaII | CCGG | 2 cut(s) | 8, 662 |
| Hpy166II | GTNNAC | 1 cut(s) | 726 |
| Hpy188I | TCNGA | 3 cut(s) | 118, 682, 748 |
| Hpy188III | TCNNGA | 6 cut(s) | 137, 443, 481, 621, 798, 845 |
| Hpy8I | GTNNAC | 1 cut(s) | 726 |
| HpyAV | CCTTC | 1 cut(s) | 337 |
| HpyCH4III | ACNGT | 3 cut(s) | 367, 583, 804 |
| HpyCH4IV | ACGT | 1 cut(s) | 553 |
| HpyCH4V | TGCA | 6 cut(s) | 122, 311, 427, 453, 668, 830 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 74, 704 |
| HpyF3I | CTNAG | 2 cut(s) | 207, 729 |
| HpySE526I | ACGT | 1 cut(s) | 553 |
| Hsp92II | CATG | 2 cut(s) | 427, 446 |
| Kzo9I | GATC | 3 cut(s) | 493, 500, 847 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 8 cut(s) | 21, 150, 210, 300, 397, 588, 675, 783 |
| Lsp1109I | GCAGC | 3 cut(s) | 52, 323, 544 |
| LweI | GCATC | 3 cut(s) | 109, 655, 811 |
| MaeI | CTAG | 3 cut(s) | 219, 285, 621 |
| MaeII | ACGT | 1 cut(s) | 553 |
| MaeIII | GTNAC | 1 cut(s) | 337 |
| MalI | GATC | 3 cut(s) | 495, 502, 849 |
| MboI | GATC | 3 cut(s) | 493, 500, 847 |
| MboII | GAAGA | 6 cut(s) | 194, 644, 791, 794, 797, 798 |
| MflI | RGATCY | 2 cut(s) | 500, 847 |
| MluCI | AATT | 7 cut(s) | 130, 202, 275, 360, 373, 635, 792 |
| MlyI | GAGTC | 1 cut(s) | 345 |
| MnlI | CCTC | 9 cut(s) | 25, 29, 204, 225, 334, 395, 589, 724, 848 |
| MseI | TTAA | 3 cut(s) | 249, 369, 615 |
| MspI | CCGG | 2 cut(s) | 8, 662 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 74, 704 |
| NdeII | GATC | 3 cut(s) | 493, 500, 847 |
| NlaIII | CATG | 2 cut(s) | 427, 446 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 1 cut(s) | 337 |
| NspV | TTCGAA | 1 cut(s) | 469 |
| PagI | TCATGA | 1 cut(s) | 442 |
| PceI | AGGCCT | 1 cut(s) | 214 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 155 |
| PfeI | GAWTC | 3 cut(s) | 125, 587, 743 |
| PkrI | GCNGC | 3 cut(s) | 67, 313, 559 |
| PleI | GAGTC | 1 cut(s) | 344 |
| PmaCI | CACGTG | 1 cut(s) | 554 |
| PmlI | CACGTG | 1 cut(s) | 554 |
| PpsI | GAGTC | 1 cut(s) | 344 |
| Ppu21I | YACGTR | 1 cut(s) | 554 |
| PspCI | CACGTG | 1 cut(s) | 554 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 2 cut(s) | 800, 842 |
| PsuI | RGATCY | 2 cut(s) | 500, 847 |
| RsaI | GTAC | 2 cut(s) | 773, 837 |
| RsaNI | GTAC | 2 cut(s) | 772, 836 |
| SaqAI | TTAA | 3 cut(s) | 249, 369, 615 |
| SatI | GCNGC | 3 cut(s) | 66, 312, 558 |
| Sau3AI | GATC | 3 cut(s) | 493, 500, 847 |
| Sau96I | GGNCC | 2 cut(s) | 800, 842 |
| ScaI | AGTACT | 1 cut(s) | 837 |
| SchI | GAGTC | 1 cut(s) | 345 |
| SfaNI | GCATC | 3 cut(s) | 109, 655, 811 |
| SfuI | TTCGAA | 1 cut(s) | 469 |
| SinI | GGWCC | 2 cut(s) | 800, 842 |
| Sse9I | AATT | 7 cut(s) | 130, 202, 275, 360, 373, 635, 792 |
| SseBI | AGGCCT | 1 cut(s) | 214 |
| SspMI | CTAG | 3 cut(s) | 219, 285, 621 |
| StuI | AGGCCT | 1 cut(s) | 214 |
| StyI | CCWWGG | 3 cut(s) | 173, 218, 331 |
| TaaI | ACNGT | 3 cut(s) | 367, 583, 804 |
| TaiI | ACGT | 1 cut(s) | 556 |
| TaqI | TCGA | 1 cut(s) | 469 |
| TasI | AATT | 7 cut(s) | 130, 202, 275, 360, 373, 635, 792 |
| TatI | WGTACW | 2 cut(s) | 771, 835 |
| TfiI | GAWTC | 3 cut(s) | 125, 587, 743 |
| Tru1I | TTAA | 3 cut(s) | 249, 369, 615 |
| Tru9I | TTAA | 3 cut(s) | 249, 369, 615 |
| TscAI | CASTG | 1 cut(s) | 634 |
| TseFI | GTSAC | 1 cut(s) | 337 |
| TseI | GCWGC | 3 cut(s) | 65, 311, 557 |
| Tsp45I | GTSAC | 1 cut(s) | 337 |
| TspDTI | ATGAA | 3 cut(s) | 431, 527, 717 |
| TspRI | CASTG | 1 cut(s) | 634 |
| VpaK11BI | GGWCC | 2 cut(s) | 800, 842 |
| XapI | RAATTY | 3 cut(s) | 202, 275, 635 |
| XbaI | TCTAGA | 1 cut(s) | 620 |
| XmaJI | CCTAGG | 1 cut(s) | 218 |
| XspI | CTAG | 3 cut(s) | 219, 285, 621 |
| ZrmI | AGTACT | 1 cut(s) | 837 |