RchiOBHm_Chr6g0269851

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000089
Physical Location & Seq
Forward (+)
27357463 .. 27366199
8737 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24206

Sequence Viewer

Length: 1584 bp
ATGATCATATTGTCATTAACTGCACCTTGGAAGGCAAACCATATCTGTTTGCGATATAGAAAACACAAACTCTCTGGATTCTCTCCCCTCTCGCTCTATTTCGTAATTCGATTCCTTCATTGGTTGATTAAGTACTGCAGATCTACATTATCCTCTGTCAGCGAAAGGCTTAAAAAAACTACTATGGAAACAGTGAAAAAAAGAGGCAGAACCGGATATACAGAAGATGCACGTGCTAGACAATCAGATGATTGTTCAGAATCAAATCCTGAACTTGAGCTTACTCCTGATCCTGCTAGCAATGGAAAAAAGGCTGTAAGAGGTAAAACTACATTGCAGGTCATTCCAACGGGAGAATCTAATCGACAATCTGTTGAGTGGAATGAAAGAGGACAACCTGTTGGGGATTTTTCAAAAAGGTTTAGCTCAACTGTTGGGGTTTTAGTAAGAGAGACTGTGCCGATCAACATACAAACTTGGCCTGCTGTGGATGATAAAACGAAGAACAGCATCTGGGGTCTTTTGATGCAAAAATATGTGGTGGATCTTACTCATAAGACATTTATCTTACAACAAATGGGAAGGCTATGGAGAGCTTGGAAATCTGATCTCTCAACTAACATCAGGATAATTGTAGATAGTAGACGCACTAAGTCAGAAACTACAAGGCTACTTAGCATTCTTAAGCCATCTGATGTGCCACTAAAAGAGTGGGATGAGTTCGTGGCAGAACGTAGTTCAGAGTCATGGCAAGAAAAGAGTGAGAAAATGAAAAAAATAAGAGCAAAACAGACTTTAACACACACAATGAGCCGAAAAGGTTATGCAAGGTTGGAAGATGACTATAAAAAGGAAAATCCTGGAAAATTGTTGAGTAGGGCAGAATTATGGATTAAAGGACACGAGCAGAAGAAGTCAAAAAATGAACATGTGGCTGCCAAAATTATTGAGATACAAGCTAAACTTGATGTGCAACCGCCTAGTGAAGGTCATATTCCTGTAAAATATGATATATTGAGTCAGGTTCTTGGTAAGGAGCGTCCTGGTCGTGTTAGAGGTCTGGGATCAGGGGTTACACCTTCAAAGGTAGATGCTCAACTAGAAAGTAGCTCATGGAAACAAACATTAGAGAATAAAATTGATGCAATGAGTGAGCGTACAAAGCTTCTGGAGGATATAATTTTAAAGATGAGCCAAAATGGGCATGGTGGTGGTGGTGATGGTGAAAATATGCATGCTGATCCTGTTGGTACTCCTCAAAATGGACATGGACATGGTGAACCTGGTACTGGAAATTCTAAGTCAGGACAAGATAGCACCCAACTTTCTATCAATGATAAATGCAAGTTGCTAAACTGGGAGGGTACAAGTGAAGTAGTGGCTAGAGGACACATTTCTGATATTCACCCAGAATCAAAAGTGCATGGCTACAAACTTGGACCTGATTGTTATAGAATTGCTATTGAGGAAGTTGTCATGCCTGATGCTGTATTCTATCGAAGTCAGCCCGAATTTGTGACTATGGAAGATGCACTTGGAAGTACTGTTGCTTGGCCGATTAAGTACATTCTTTGTGACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

527

Amino Acids

59.46

Weight (kDa)

9.25

Isoelectric Point (pI)

45.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 238 - 360 3.9e-18 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 442 - 524 3.8e-10 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 328
AccI GTMKAC 1 cut(s) 643
AciI CCGC 1 cut(s) 977
AclWI GGATC 4 cut(s) 284, 552, 1072, 1235
AcoI YGGCCR 1 cut(s) 1553
AcsI RAATTY 2 cut(s) 1294, 1511
AcvI CACGTG 1 cut(s) 233
AfaI GTAC 7 cut(s) 134, 1159, 1252, 1288, 1366, 1543, 1565
AfiI CCNNNNNNNGG 3 cut(s) 986, 1262, 1289
AflII CTTAAG 1 cut(s) 683
AflIII ACRYGT 1 cut(s) 928
AgsI TTSAA 2 cut(s) 414, 1083
AjnI CCWGG 3 cut(s) 859, 1042, 1282
AjuI GAANNNNNNNTTGG 2 cut(s) 1518, 1550
AluBI AGCT 6 cut(s) 280, 426, 596, 959, 1110, 1165
AluI AGCT 6 cut(s) 280, 426, 596, 959, 1110, 1165
Alw26I GTCTC 1 cut(s) 446
AlwI GGATC 4 cut(s) 284, 552, 1072, 1235
AlwNI CAGNNNCTG 1 cut(s) 513
AoxI GGCC 2 cut(s) 479, 1553
ApeKI GCWGC 1 cut(s) 935
ApoI RAATTY 2 cut(s) 1294, 1511
AspS9I GGNCC 1 cut(s) 1439
AsuHPI GGTGA 4 cut(s) 1229, 1235, 1289, 1397
AsuNHI GCTAGC 1 cut(s) 296
AvaII GGWCC 1 cut(s) 1439
BauI CACGAG 1 cut(s) 902
BbrPI CACGTG 1 cut(s) 233
BbvI GCAGC 1 cut(s) 922
BccI CCATC 2 cut(s) 697, 1214
BciT130I CCWGG 3 cut(s) 861, 1044, 1284
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 446
BfaI CTAG 5 cut(s) 237, 297, 981, 1100, 1383
BfmI CTRYAG 1 cut(s) 136
BfrI CTTAAG 1 cut(s) 683
BfuAI ACCTGC 1 cut(s) 328
BglII AGATCT 1 cut(s) 140
BisI GCNGC 1 cut(s) 936
BlsI GCNGC 1 cut(s) 937
BmcAI AGTACT 2 cut(s) 134, 1543
Bme1390I CCNGG 3 cut(s) 861, 1044, 1284
Bme18I GGWCC 1 cut(s) 1439
BmgT120I GGNCC 1 cut(s) 1439
BmrFI CCNGG 3 cut(s) 861, 1044, 1284
BmrI ACTGGG 1 cut(s) 1366
BmsI GCATC 7 cut(s) 217, 516, 519, 1081, 1132, 1474, 1519
BmtI GCTAGC 1 cut(s) 300
BmuI ACTGGG 1 cut(s) 1366
BpmI CTGGAG 1 cut(s) 1190
BpuEI CTTGAG 1 cut(s) 296
BsaAI YACGTR 1 cut(s) 233
BsaJI CCNNGG 1 cut(s) 26
BsaWI WCCGGW 1 cut(s) 212
Bsc4I CCNNNNNNNGG 3 cut(s) 986, 1262, 1289
Bse1I ACTGG 2 cut(s) 1294, 1361
Bse3DI GCAATG 3 cut(s) 307, 332, 1152
BseBI CCWGG 3 cut(s) 861, 1044, 1284
BseDI CCNNGG 1 cut(s) 26
BseGI GGATG 2 cut(s) 496, 721
BseLI CCNNNNNNNGG 3 cut(s) 986, 1262, 1289
BseMI GCAATG 3 cut(s) 307, 332, 1152
BseNI ACTGG 2 cut(s) 1294, 1361
BseRI GAGGAG 1 cut(s) 1245
BseXI GCAGC 1 cut(s) 922
BsgI GTGCAG 1 cut(s) 6
BshFI GGCC 2 cut(s) 481, 1555
BsiSI CCGG 1 cut(s) 213
BslI CCNNNNNNNGG 3 cut(s) 986, 1262, 1289
BsmAI GTCTC 1 cut(s) 446
BsmI GAATGC 1 cut(s) 678
BsnI GGCC 2 cut(s) 481, 1555
Bsp143I GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
BspACI CCGC 1 cut(s) 977
BspANI GGCC 2 cut(s) 481, 1555
BspMAI CTGCAG 1 cut(s) 140
BspMI ACCTGC 1 cut(s) 328
BspOI GCTAGC 1 cut(s) 300
BspPI GGATC 4 cut(s) 284, 552, 1072, 1235
BspTI CTTAAG 1 cut(s) 683
BsrDI GCAATG 3 cut(s) 307, 332, 1152
BsrI ACTGG 2 cut(s) 1294, 1361
BssECI CCNNGG 1 cut(s) 26
BssMI GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
BssSI CACGAG 1 cut(s) 902
BssT1I CCWWGG 1 cut(s) 26
Bst2BI CACGAG 1 cut(s) 902
Bst2UI CCWGG 3 cut(s) 861, 1044, 1284
Bst4CI ACNGT 4 cut(s) 193, 433, 457, 1546
BstAFI CTTAAG 1 cut(s) 683
BstBAI YACGTR 1 cut(s) 233
BstC8I GCNNGC 3 cut(s) 298, 483, 1236
BstDEI CTNAG 3 cut(s) 651, 674, 1299
BstENI CCTNNNNNAGG 1 cut(s) 984
BstF5I GGATG 2 cut(s) 496, 721
BstKTI GATC 8 cut(s) 6, 143, 292, 465, 547, 610, 1067, 1243
BstMAI GTCTC 1 cut(s) 446
BstMBI GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
BstMWI GCNNNNNNNGC 1 cut(s) 1162
BstNI CCWGG 3 cut(s) 861, 1044, 1284
BstNSI RCATGY 2 cut(s) 932, 1238
BstSCI CCNGG 3 cut(s) 859, 1042, 1282
BstSFI CTRYAG 1 cut(s) 136
BstV1I GCAGC 1 cut(s) 922
BstX2I RGATCY 2 cut(s) 140, 544
BstYI RGATCY 2 cut(s) 140, 544
BsuRI GGCC 2 cut(s) 481, 1555
BtsCI GGATG 2 cut(s) 496, 721
BtsIMutI CAGTG 1 cut(s) 198
BveI ACCTGC 1 cut(s) 328
Cac8I GCNNGC 3 cut(s) 298, 483, 1236
CaiI CAGNNNCTG 1 cut(s) 513
Cfr13I GGNCC 1 cut(s) 1439
CseI GACGC 2 cut(s) 654, 1028
CsiI ACCWGGT 1 cut(s) 1282
Csp6I GTAC 7 cut(s) 133, 1158, 1251, 1287, 1365, 1542, 1564
CviAII CATG 9 cut(s) 747, 929, 1113, 1205, 1235, 1268, 1274, 1424, 1477
CviQI GTAC 7 cut(s) 133, 1158, 1251, 1287, 1365, 1542, 1564
DdeI CTNAG 3 cut(s) 651, 674, 1299
DpnI GATC 8 cut(s) 5, 142, 291, 464, 546, 609, 1066, 1242
DpnII GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
DraI TTTAAA 1 cut(s) 1185
EaeI YGGCCR 1 cut(s) 1553
Eco130I CCWWGG 1 cut(s) 26
Eco47I GGWCC 1 cut(s) 1439
Eco72I CACGTG 1 cut(s) 233
EcoNI CCTNNNNNAGG 1 cut(s) 984
EcoRII CCWGG 3 cut(s) 859, 1042, 1282
EcoT14I CCWWGG 1 cut(s) 26
EcoT22I ATGCAT 1 cut(s) 1236
ErhI CCWWGG 1 cut(s) 26
FaeI CATG 9 cut(s) 750, 932, 1116, 1208, 1238, 1271, 1277, 1427, 1480
FalI AAGNNNNNCTT 4 cut(s) 948, 980, 1518, 1550
FatI CATG 9 cut(s) 746, 928, 1112, 1204, 1234, 1267, 1273, 1423, 1476
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 643
Fnu4HI GCNGC 1 cut(s) 936
FokI GGATG 2 cut(s) 503, 728
Fsp4HI GCNGC 1 cut(s) 936
FspBI CTAG 5 cut(s) 237, 297, 981, 1100, 1383
GluI GCNGC 1 cut(s) 936
GsuI CTGGAG 1 cut(s) 1190
HaeIII GGCC 2 cut(s) 481, 1555
HapII CCGG 1 cut(s) 213
HgaI GACGC 2 cut(s) 654, 1028
Hin1II CATG 9 cut(s) 750, 932, 1116, 1208, 1238, 1271, 1277, 1427, 1480
HindIII AAGCTT 1 cut(s) 1163
HinfI GANTC 7 cut(s) 78, 111, 260, 356, 743, 1018, 1412
HpaII CCGG 1 cut(s) 213
HphI GGTGA 4 cut(s) 1229, 1235, 1289, 1397
Hpy166II GTNNAC 2 cut(s) 644, 1280
Hpy188I TCNGA 7 cut(s) 247, 259, 607, 658, 694, 742, 1399
Hpy188III TCNNGA 6 cut(s) 75, 269, 287, 625, 1169, 1305
Hpy8I GTNNAC 2 cut(s) 644, 1280
HpyAV CCTTC 5 cut(s) 25, 125, 576, 980, 1089
HpyCH4III ACNGT 4 cut(s) 193, 433, 457, 1546
HpyCH4IV ACGT 2 cut(s) 232, 733
HpyF10VI GCNNNNNNNGC 1 cut(s) 1162
HpyF3I CTNAG 3 cut(s) 651, 674, 1299
HpySE526I ACGT 2 cut(s) 232, 733
Hsp92II CATG 9 cut(s) 750, 932, 1116, 1208, 1238, 1271, 1277, 1427, 1480
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
LmnI GCTCC 1 cut(s) 1036
Lsp1109I GCAGC 1 cut(s) 922
LweI GCATC 7 cut(s) 217, 516, 519, 1081, 1132, 1474, 1519
MabI ACCWGGT 1 cut(s) 1282
MaeI CTAG 5 cut(s) 237, 297, 981, 1100, 1383
MaeII ACGT 2 cut(s) 232, 733
MaeIII GTNAC 3 cut(s) 1072, 1516, 1574
MalI GATC 8 cut(s) 5, 142, 291, 464, 546, 609, 1066, 1242
MboI GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
MboII GAAGA 5 cut(s) 236, 514, 848, 922, 1538
MfeI CAATTG 1 cut(s) 1579
MflI RGATCY 2 cut(s) 140, 544
MlyI GAGTC 2 cut(s) 752, 1027
MmeI TCCRAC 2 cut(s) 371, 813
Mph1103I ATGCAT 1 cut(s) 1236
MseI TTAA 8 cut(s) 17, 129, 171, 684, 797, 894, 1184, 1560
MslI CAYNNNNRTG 2 cut(s) 1209, 1272
MspCI CTTAAG 1 cut(s) 683
MspI CCGG 1 cut(s) 213
MspR9I CCNGG 3 cut(s) 861, 1044, 1284
MunI CAATTG 1 cut(s) 1579
Mva1269I GAATGC 1 cut(s) 678
MvaI CCWGG 3 cut(s) 861, 1044, 1284
MwoI GCNNNNNNNGC 1 cut(s) 1162
NdeII GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
NheI GCTAGC 1 cut(s) 296
NlaIII CATG 9 cut(s) 750, 932, 1116, 1208, 1238, 1271, 1277, 1427, 1480
NmuCI GTSAC 2 cut(s) 1516, 1574
NsiI ATGCAT 1 cut(s) 1236
NspI RCATGY 2 cut(s) 932, 1238
PaeI GCATGC 1 cut(s) 1238
PciI ACATGT 1 cut(s) 928
PctI GAATGC 1 cut(s) 678
PfeI GAWTC 5 cut(s) 78, 111, 260, 356, 1412
PfoI TCCNGGA 1 cut(s) 859
PkrI GCNGC 1 cut(s) 937
PleI GAGTC 2 cut(s) 751, 1026
PmaCI CACGTG 1 cut(s) 233
PmlI CACGTG 1 cut(s) 233
PpsI GAGTC 2 cut(s) 751, 1026
Ppu21I YACGTR 1 cut(s) 233
PscI ACATGT 1 cut(s) 928
Psp6I CCWGG 3 cut(s) 859, 1042, 1282
PspCI CACGTG 1 cut(s) 233
PspGI CCWGG 3 cut(s) 859, 1042, 1282
PspPI GGNCC 1 cut(s) 1439
PsrI GAACNNNNNNTAC 2 cut(s) 202, 234
PstI CTGCAG 1 cut(s) 140
PstNI CAGNNNCTG 1 cut(s) 513
PsuI RGATCY 2 cut(s) 140, 544
RsaI GTAC 7 cut(s) 134, 1159, 1252, 1288, 1366, 1543, 1565
RsaNI GTAC 7 cut(s) 133, 1158, 1251, 1287, 1365, 1542, 1564
RseI CAYNNNNRTG 2 cut(s) 1209, 1272
SaqAI TTAA 8 cut(s) 17, 129, 171, 684, 797, 894, 1184, 1560
SatI GCNGC 1 cut(s) 936
Sau3AI GATC 8 cut(s) 3, 140, 289, 462, 544, 607, 1064, 1240
Sau96I GGNCC 1 cut(s) 1439
ScaI AGTACT 2 cut(s) 134, 1543
SchI GAGTC 2 cut(s) 752, 1027
ScrFI CCNGG 3 cut(s) 861, 1044, 1284
SexAI ACCWGGT 1 cut(s) 1282
SfaNI GCATC 7 cut(s) 217, 516, 519, 1081, 1132, 1474, 1519
SfcI CTRYAG 1 cut(s) 136
SinI GGWCC 1 cut(s) 1439
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1272
SmlI CTYRAG 2 cut(s) 275, 683
SmoI CTYRAG 2 cut(s) 275, 683
SphI GCATGC 1 cut(s) 1238
SsiI CCGC 1 cut(s) 977
SspMI CTAG 5 cut(s) 237, 297, 981, 1100, 1383
StyD4I CCNGG 3 cut(s) 859, 1042, 1282
StyI CCWWGG 1 cut(s) 26
TaaI ACNGT 4 cut(s) 193, 433, 457, 1546
TaiI ACGT 2 cut(s) 235, 736
TaqI TCGA 3 cut(s) 109, 364, 1498
TatI WGTACW 3 cut(s) 132, 1541, 1563
TfiI GAWTC 5 cut(s) 78, 111, 260, 356, 1412
Tru1I TTAA 8 cut(s) 17, 129, 171, 684, 797, 894, 1184, 1560
Tru9I TTAA 8 cut(s) 17, 129, 171, 684, 797, 894, 1184, 1560
TscAI CASTG 1 cut(s) 198
TseFI GTSAC 2 cut(s) 1516, 1574
TseI GCWGC 1 cut(s) 935
Tsp45I GTSAC 2 cut(s) 1516, 1574
TspDTI ATGAA 4 cut(s) 107, 399, 785, 939
TspRI CASTG 1 cut(s) 198
Vha464I CTTAAG 1 cut(s) 683
VpaK11BI GGWCC 1 cut(s) 1439
XagI CCTNNNNNAGG 1 cut(s) 984
XapI RAATTY 2 cut(s) 1294, 1511
XceI RCATGY 2 cut(s) 932, 1238
XcmI CCANNNNNNNNNTGG 2 cut(s) 708, 1202
XmiI GTMKAC 1 cut(s) 643
XspI CTAG 5 cut(s) 237, 297, 981, 1100, 1383
ZrmI AGTACT 2 cut(s) 134, 1543
Zsp2I ATGCAT 1 cut(s) 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.