RLG00000034060

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000089
Physical Location & Seq
Reverse (-)
36044552 .. 36048182
3631 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034060

Sequence Viewer

Length: 1551 bp
ATGCCTTCTGGAGAGATCTCAAAGAAAGGTGCAAAGAGAGCCAAAATGCAAGATAAAGTTGCACATGCAGTTGATGTTTCAGCTAGGCAACAAAGGCATAATCCCATGAGAAATTCTGAAGCAAATTTGAGTTTTTCGTCTCATTTGCCAGCAGATGCAGAACCTATTTCAGCTGAAGGTGAAGCTACAGAAAAGCCAAAAATACCACCCAGAGGTAAAGCAAAATTGTTGGACATTAGCAAGAAAAAGAGAAAACGTCCTATCTTGGTTGAATTCAATGAAAGAGGCCAGCCAATTGGGAAAACTGCAGCTCTATTCTCCTCATTTATTGGATGCACAGCAAGAGAGCTAATACCAATGACTGCACCGACCTGGAAAAATCTTTCAGATTTGTTCAAAACTCAGATTTGGGAACACATAACAACAAGTTTCATTGTTGACGAATGCCATAAGAAACAAGTTATTCGAAGGATGATCAAGCTTTGGCGAGATAATAGATCCAATGTGATGAAAGAAGTGGAGAAGCAAGCCGAACTTGTAGGCCTACAACGTGCTGCTACCCTTCTCAAACCTGATAATGTAGAATCTATGAATCAGTGGCTAGATTTTGTCAAAAACAGAACTAGTCCATCATTTAAGGAAATGTCTAAAAAATTCAAAGCAATGCGCGCAGAAAGAACCTTACTCCACAGAACTAGTAGAAAAAGCTTTGCTCGTGTTGAAGAAGAATTAAGGGAACAAAGTGAAATCCCAGATGCAATAACAAGGTCTGATGTTTGGATTCATGCTTACGAAGTAAAGAAGAAGAAGGATTCAGATGTAGTGGAGGATCCAGAAATAGTGAAACAAGTGAAAATGTACAGAGCTGAGCAAGAACCTTCAGAGAAATGTTCTTTGAAAGATGATGCTGTTGCAAAAGTACTTGGTCCTGATCCACGAGGACGAGTAAGAGGTTTGGGATTTGGAGCAGTCCCTTTAAAGGCAGATTATCAAACCAGTGTTGGAAACAAAGTTGCTAAGTTAGAGAATGCTTTATTTGCTCAATCACAAGATATGCTTGCTCAATCACAAGAGATCGAACGATTGAAAGAGGTGGTTGGAACTATTTTGGCACGGACAGAGAGAGAGGGGAATAACCATGGAAGTACTAGTGGTCAGCATTCTGGTAATGCGCTTTCACAACAAAAAGATAAGGAAAATACAAGTGTGAGTGTGCGGAATTCTGAAACTGGGGGAGGACAAATCAAGCTCAATAAACAGAACTTAAGTGTTCAACATTCTGTTGATGAGGGGTTGCAGACCAAAGAAAAGGAAGCATCATCAAAGCTCAGTAAGATGATCCGACTTAACCTTTCCGGAGGAGCTGCTGCGATGTTTGGACTGTGGAGATTTTCTAGAGCCTTAGATTCATGTGTGGAACATATTCTTGCACTGGATGGGAGTCGGATGCAGGCAGTTCTTCAATCAACTGAATATTGCAAGTATTTGAAGCTTTGTCTAGCTTTATGGTTTGCTTTCATTGCTTTTAATCAGTTCATGAGAATGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

517

Amino Acids

58.12

Weight (kDa)

9.6

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 198 - 322 7.5e-18 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 669
AccIII TCCGGA 1 cut(s) 1355
AciI CCGC 1 cut(s) 1216
AclWI GGATC 5 cut(s) 492, 824, 837, 926, 1333
AcsI RAATTY 5 cut(s) 112, 124, 272, 653, 1219
AcuI CTGAAG 3 cut(s) 138, 195, 864
AfaI GTAC 3 cut(s) 860, 921, 1147
AfiI CCNNNNNNNGG 2 cut(s) 212, 979
AflII CTTAAG 1 cut(s) 1264
AhlI ACTAGT 3 cut(s) 623, 695, 1148
AjnI CCWGG 1 cut(s) 371
Alw26I GTCTC 1 cut(s) 144
AlwI GGATC 5 cut(s) 492, 824, 837, 926, 1333
Aor13HI TCCGGA 1 cut(s) 1355
AoxI GGCC 2 cut(s) 286, 541
ApeKI GCWGC 4 cut(s) 308, 554, 1364, 1367
ApoI RAATTY 5 cut(s) 112, 124, 272, 653, 1219
Asp700I GAANNNNTTC 1 cut(s) 1422
AspLEI GCGC 3 cut(s) 669, 671, 1174
AspS9I GGNCC 1 cut(s) 926
AsuHPI GGTGA 1 cut(s) 191
AsuII TTCGAA 1 cut(s) 466
AvaII GGWCC 1 cut(s) 926
BamHI GGATCC 1 cut(s) 829
BauI CACGAG 2 cut(s) 714, 936
BbvI GCAGC 4 cut(s) 320, 541, 1351, 1354
BccI CCATC 2 cut(s) 637, 1430
BciT130I CCWGG 1 cut(s) 373
BclI TGATCA 1 cut(s) 474
BcoDI GTCTC 1 cut(s) 144
BcuI ACTAGT 3 cut(s) 623, 695, 1148
BfaI CTAG 7 cut(s) 84, 602, 624, 696, 1149, 1395, 1499
BfmI CTRYAG 2 cut(s) 186, 306
BfrI CTTAAG 1 cut(s) 1264
BglII AGATCT 1 cut(s) 15
BisI GCNGC 4 cut(s) 309, 555, 1365, 1368
BlpI GCTNAGC 1 cut(s) 867
BlsI GCNGC 4 cut(s) 310, 556, 1366, 1369
BmcAI AGTACT 2 cut(s) 921, 1147
Bme1390I CCNGG 1 cut(s) 373
Bme18I GGWCC 1 cut(s) 926
BmgT120I GGNCC 1 cut(s) 926
BmiI GGNNCC 1 cut(s) 831
BmrFI CCNGG 1 cut(s) 373
BmrI ACTGGG 1 cut(s) 1239
BmsI GCATC 6 cut(s) 145, 323, 745, 895, 1325, 1437
BmuI ACTGGG 1 cut(s) 1239
BpmI CTGGAG 1 cut(s) 30
Bpu1102I GCTNAGC 1 cut(s) 867
Bpu14I TTCGAA 1 cut(s) 466
BsaJI CCNNGG 1 cut(s) 1138
BsaWI WCCGGW 1 cut(s) 1355
Bsc4I CCNNNNNNNGG 2 cut(s) 212, 979
Bse1I ACTGG 3 cut(s) 996, 1234, 1437
Bse3DI GCAATG 2 cut(s) 669, 1518
BseAI TCCGGA 1 cut(s) 1355
BseBI CCWGG 1 cut(s) 373
BseDI CCNNGG 1 cut(s) 1138
BseGI GGATG 4 cut(s) 338, 477, 1441, 1452
BseLI CCNNNNNNNGG 2 cut(s) 212, 979
BseMI GCAATG 2 cut(s) 669, 1518
BseMII CTCAG 3 cut(s) 416, 858, 1342
BseNI ACTGG 3 cut(s) 996, 1234, 1437
BsePI GCGCGC 1 cut(s) 667
BseRI GAGGAG 2 cut(s) 310, 1374
BseXI GCAGC 4 cut(s) 320, 541, 1351, 1354
BsgI GTGCAG 1 cut(s) 348
Bsh1236I CGCG 1 cut(s) 669
BshFI GGCC 2 cut(s) 288, 543
BsiSI CCGG 1 cut(s) 1356
BslFI GGGAC 1 cut(s) 956
BslI CCNNNNNNNGG 2 cut(s) 212, 979
BsmAI GTCTC 1 cut(s) 144
BsmBI CGTCTC 1 cut(s) 144
BsmFI GGGAC 1 cut(s) 956
BsmI GAATGC 3 cut(s) 449, 1033, 1159
BsnI GGCC 2 cut(s) 288, 543
Bsp119I TTCGAA 1 cut(s) 466
Bsp13I TCCGGA 1 cut(s) 1355
Bsp1407I TGTACA 1 cut(s) 858
Bsp143I GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
Bsp1720I GCTNAGC 1 cut(s) 867
Bsp19I CCATGG 1 cut(s) 1138
BspACI CCGC 1 cut(s) 1216
BspANI GGCC 2 cut(s) 288, 543
BspCNI CTCAG 3 cut(s) 415, 859, 1341
BspEI TCCGGA 1 cut(s) 1355
BspFNI CGCG 1 cut(s) 669
BspHI TCATGA 1 cut(s) 1536
BspLI GGNNCC 1 cut(s) 831
BspMAI CTGCAG 1 cut(s) 310
BspPI GGATC 5 cut(s) 492, 824, 837, 926, 1333
BspT104I TTCGAA 1 cut(s) 466
BspTI CTTAAG 1 cut(s) 1264
BsrDI GCAATG 2 cut(s) 669, 1518
BsrGI TGTACA 1 cut(s) 858
BsrI ACTGG 3 cut(s) 996, 1234, 1437
BssECI CCNNGG 1 cut(s) 1138
BssHII GCGCGC 1 cut(s) 667
BssMI GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
BssSI CACGAG 2 cut(s) 714, 936
BssT1I CCWWGG 1 cut(s) 1138
Bst2BI CACGAG 2 cut(s) 714, 936
Bst2UI CCWGG 1 cut(s) 373
Bst4CI ACNGT 1 cut(s) 1383
BstAFI CTTAAG 1 cut(s) 1264
BstAUI TGTACA 1 cut(s) 858
BstBI TTCGAA 1 cut(s) 466
BstC8I GCNNGC 6 cut(s) 150, 290, 528, 669, 1059, 1452
BstDEI CTNAG 5 cut(s) 402, 867, 1017, 1328, 1402
BstDSI CCRYGG 1 cut(s) 1138
BstF5I GGATG 4 cut(s) 338, 477, 1441, 1452
BstFNI CGCG 1 cut(s) 669
BstHHI GCGC 3 cut(s) 669, 671, 1174
BstKTI GATC 7 cut(s) 18, 477, 500, 832, 934, 1077, 1341
BstMAI GTCTC 1 cut(s) 144
BstMBI GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
BstMWI GCNNNNNNNGC 5 cut(s) 38, 94, 668, 1037, 1520
BstNI CCWGG 1 cut(s) 373
BstNSI RCATGY 1 cut(s) 68
BstSCI CCNGG 1 cut(s) 371
BstSFI CTRYAG 2 cut(s) 186, 306
BstUI CGCG 1 cut(s) 669
BstV1I GCAGC 4 cut(s) 320, 541, 1351, 1354
BstX2I RGATCY 3 cut(s) 15, 497, 829
BstXI CCANNNNNNTGG 1 cut(s) 296
BstYI RGATCY 3 cut(s) 15, 497, 829
BsuRI GGCC 2 cut(s) 288, 543
BtgI CCRYGG 1 cut(s) 1138
BtgZI GCGATG 1 cut(s) 1385
BtsCI GGATG 4 cut(s) 338, 477, 1441, 1452
BtsIMutI CAGTG 3 cut(s) 602, 1003, 1430
Cac8I GCNNGC 6 cut(s) 150, 290, 528, 669, 1059, 1452
CciI TCATGA 1 cut(s) 1536
CfoI GCGC 3 cut(s) 669, 671, 1174
Cfr13I GGNCC 1 cut(s) 926
Csp6I GTAC 3 cut(s) 859, 920, 1146
CviAII CATG 6 cut(s) 65, 106, 785, 1139, 1410, 1537
CviQI GTAC 3 cut(s) 859, 920, 1146
DdeI CTNAG 5 cut(s) 402, 867, 1017, 1328, 1402
DpnI GATC 7 cut(s) 17, 476, 499, 831, 933, 1076, 1340
DpnII GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
DraI TTTAAA 1 cut(s) 978
Eco130I CCWWGG 1 cut(s) 1138
Eco147I AGGCCT 1 cut(s) 543
Eco47I GGWCC 1 cut(s) 926
Eco57I CTGAAG 3 cut(s) 138, 195, 864
EcoRI GAATTC 2 cut(s) 272, 1219
EcoRII CCWGG 1 cut(s) 371
EcoT14I CCWWGG 1 cut(s) 1138
ErhI CCWWGG 1 cut(s) 1138
Esp3I CGTCTC 1 cut(s) 144
FaeI CATG 6 cut(s) 68, 109, 788, 1142, 1413, 1540
FalI AAGNNNNNCTT 4 cut(s) 519, 551, 1041, 1073
FaqI GGGAC 1 cut(s) 956
FatI CATG 6 cut(s) 64, 105, 784, 1138, 1409, 1536
FbaI TGATCA 1 cut(s) 474
Fnu4HI GCNGC 4 cut(s) 309, 555, 1365, 1368
FokI GGATG 4 cut(s) 345, 484, 1448, 1459
Fsp4HI GCNGC 4 cut(s) 309, 555, 1365, 1368
FspBI CTAG 7 cut(s) 84, 602, 624, 696, 1149, 1395, 1499
GlaI GCGC 3 cut(s) 668, 670, 1173
GluI GCNGC 4 cut(s) 309, 555, 1365, 1368
GsuI CTGGAG 1 cut(s) 30
HaeIII GGCC 2 cut(s) 288, 543
HapII CCGG 1 cut(s) 1356
HhaI GCGC 3 cut(s) 669, 671, 1174
Hin1II CATG 6 cut(s) 68, 109, 788, 1142, 1413, 1540
Hin6I GCGC 3 cut(s) 667, 669, 1172
HinP1I GCGC 3 cut(s) 667, 669, 1172
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HindIII AAGCTT 3 cut(s) 479, 706, 1490
HinfI GANTC 6 cut(s) 584, 592, 781, 812, 1406, 1441
HpaII CCGG 1 cut(s) 1356
HphI GGTGA 1 cut(s) 191
Hpy166II GTNNAC 1 cut(s) 439
Hpy188I TCNGA 9 cut(s) 118, 388, 405, 772, 817, 883, 1225, 1343, 1446
Hpy188III TCNNGA 6 cut(s) 9, 833, 929, 1356, 1395, 1537
Hpy8I GTNNAC 1 cut(s) 439
HpyAV CCTTC 6 cut(s) 15, 170, 462, 572, 802, 888
HpyCH4III ACNGT 1 cut(s) 1383
HpyCH4IV ACGT 2 cut(s) 256, 550
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 94, 668, 1037, 1520
HpyF3I CTNAG 5 cut(s) 402, 867, 1017, 1328, 1402
HpySE526I ACGT 2 cut(s) 256, 550
Hsp92II CATG 6 cut(s) 68, 109, 788, 1142, 1413, 1540
HspAI GCGC 3 cut(s) 667, 669, 1172
Kpn2I TCCGGA 1 cut(s) 1355
Ksp22I TGATCA 1 cut(s) 474
Kzo9I GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
LmnI GCTCC 2 cut(s) 965, 1361
Lsp1109I GCAGC 4 cut(s) 320, 541, 1351, 1354
LweI GCATC 6 cut(s) 145, 323, 745, 895, 1325, 1437
MaeI CTAG 7 cut(s) 84, 602, 624, 696, 1149, 1395, 1499
MaeII ACGT 2 cut(s) 256, 550
MalI GATC 7 cut(s) 17, 476, 499, 831, 933, 1076, 1340
MboI GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
MboII GAAGA 5 cut(s) 734, 737, 814, 817, 1451
MfeI CAATTG 1 cut(s) 294
MflI RGATCY 3 cut(s) 15, 497, 829
MluCI AATT 8 cut(s) 112, 124, 224, 272, 294, 653, 728, 1219
MlyI GAGTC 1 cut(s) 1450
MmeI TCCRAC 5 cut(s) 210, 982, 1078, 1366, 1424
MroI TCCGGA 1 cut(s) 1355
MroXI GAANNNNTTC 1 cut(s) 1422
MseI TTAA 6 cut(s) 636, 731, 977, 1265, 1347, 1527
MslI CAYNNNNRTG 1 cut(s) 1541
MspA1I CMGCKG 1 cut(s) 173
MspCI CTTAAG 1 cut(s) 1264
MspI CCGG 1 cut(s) 1356
MspR9I CCNGG 1 cut(s) 373
MunI CAATTG 1 cut(s) 294
Mva1269I GAATGC 3 cut(s) 449, 1033, 1159
MvaI CCWGG 1 cut(s) 373
MvnI CGCG 1 cut(s) 669
MwoI GCNNNNNNNGC 5 cut(s) 38, 94, 668, 1037, 1520
NcoI CCATGG 1 cut(s) 1138
NdeII GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
NlaIII CATG 6 cut(s) 68, 109, 788, 1142, 1413, 1540
NlaIV GGNNCC 1 cut(s) 831
NspI RCATGY 1 cut(s) 68
NspV TTCGAA 1 cut(s) 466
PagI TCATGA 1 cut(s) 1536
PauI GCGCGC 1 cut(s) 667
PceI AGGCCT 1 cut(s) 543
PctI GAATGC 3 cut(s) 449, 1033, 1159
PdmI GAANNNNTTC 1 cut(s) 1422
PfeI GAWTC 5 cut(s) 584, 592, 781, 812, 1406
PkrI GCNGC 4 cut(s) 310, 556, 1366, 1369
PleI GAGTC 1 cut(s) 1449
PpsI GAGTC 1 cut(s) 1449
Psp6I CCWGG 1 cut(s) 371
PspGI CCWGG 1 cut(s) 371
PspN4I GGNNCC 1 cut(s) 831
PspPI GGNCC 1 cut(s) 926
PstI CTGCAG 1 cut(s) 310
PsuI RGATCY 3 cut(s) 15, 497, 829
PteI GCGCGC 1 cut(s) 667
PvuII CAGCTG 1 cut(s) 173
RsaI GTAC 3 cut(s) 860, 921, 1147
RsaNI GTAC 3 cut(s) 859, 920, 1146
RseI CAYNNNNRTG 1 cut(s) 1541
SaqAI TTAA 6 cut(s) 636, 731, 977, 1265, 1347, 1527
SatI GCNGC 4 cut(s) 309, 555, 1365, 1368
Sau3AI GATC 7 cut(s) 15, 474, 497, 829, 931, 1074, 1338
Sau96I GGNCC 1 cut(s) 926
ScaI AGTACT 2 cut(s) 921, 1147
SchI GAGTC 1 cut(s) 1450
ScrFI CCNGG 1 cut(s) 373
SfaNI GCATC 6 cut(s) 145, 323, 745, 895, 1325, 1437
SfcI CTRYAG 2 cut(s) 186, 306
SfuI TTCGAA 1 cut(s) 466
SinI GGWCC 1 cut(s) 926
SmiMI CAYNNNNRTG 1 cut(s) 1541
SmlI CTYRAG 1 cut(s) 1264
SmoI CTYRAG 1 cut(s) 1264
SpeI ACTAGT 3 cut(s) 623, 695, 1148
Sse9I AATT 8 cut(s) 112, 124, 224, 272, 294, 653, 728, 1219
SseBI AGGCCT 1 cut(s) 543
SsiI CCGC 1 cut(s) 1216
SspI AATATT 1 cut(s) 1475
SspMI CTAG 7 cut(s) 84, 602, 624, 696, 1149, 1395, 1499
StuI AGGCCT 1 cut(s) 543
StyD4I CCNGG 1 cut(s) 371
StyI CCWWGG 1 cut(s) 1138
TaaI ACNGT 1 cut(s) 1383
TaiI ACGT 2 cut(s) 259, 553
TaqI TCGA 2 cut(s) 466, 1077
TasI AATT 8 cut(s) 112, 124, 224, 272, 294, 653, 728, 1219
TatI WGTACW 3 cut(s) 858, 919, 1145
TfiI GAWTC 5 cut(s) 584, 592, 781, 812, 1406
Tru1I TTAA 6 cut(s) 636, 731, 977, 1265, 1347, 1527
Tru9I TTAA 6 cut(s) 636, 731, 977, 1265, 1347, 1527
TscAI CASTG 3 cut(s) 602, 1003, 1437
TseI GCWGC 4 cut(s) 308, 554, 1364, 1367
TspDTI ATGAA 8 cut(s) 294, 421, 524, 605, 773, 1398, 1507, 1525
TspGWI ACGGA 1 cut(s) 1129
TspRI CASTG 3 cut(s) 602, 1003, 1437
Vha464I CTTAAG 1 cut(s) 1264
VpaK11BI GGWCC 1 cut(s) 926
XapI RAATTY 5 cut(s) 112, 124, 272, 653, 1219
XbaI TCTAGA 1 cut(s) 1394
XceI RCATGY 1 cut(s) 68
XmnI GAANNNNTTC 1 cut(s) 1422
XspI CTAG 7 cut(s) 84, 602, 624, 696, 1149, 1395, 1499
ZrmI AGTACT 2 cut(s) 921, 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.