isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 661 |
| AclWI | GGATC | 3 cut(s) | 50, 653, 666 |
| AcsI | RAATTY | 3 cut(s) | 172, 238, 362 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 780 |
| AgsI | TTSAA | 5 cut(s) | 100, 177, 316, 386, 809 |
| AhlI | ACTAGT | 1 cut(s) | 542 |
| AluBI | AGCT | 6 cut(s) | 8, 125, 212, 400, 524, 812 |
| AluI | AGCT | 6 cut(s) | 8, 125, 212, 400, 524, 812 |
| Alw26I | GTCTC | 2 cut(s) | 75, 836 |
| AlwI | GGATC | 3 cut(s) | 50, 653, 666 |
| Ama87I | CYCGRG | 1 cut(s) | 688 |
| Aor13HI | TCCGGA | 1 cut(s) | 661 |
| AoxI | GGCC | 5 cut(s) | 14, 205, 698, 762, 771 |
| ApeKI | GCWGC | 4 cut(s) | 284, 473, 476, 896 |
| ApoI | RAATTY | 3 cut(s) | 172, 238, 362 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 46 |
| AspA2I | CCTAGG | 1 cut(s) | 17 |
| AspS9I | GGNCC | 3 cut(s) | 737, 762, 771 |
| AsuHPI | GGTGA | 1 cut(s) | 727 |
| AvaI | CYCGRG | 1 cut(s) | 688 |
| AvaII | GGWCC | 1 cut(s) | 737 |
| AvrII | CCTAGG | 1 cut(s) | 17 |
| BamHI | GGATCC | 1 cut(s) | 658 |
| BanII | GRGCYC | 2 cut(s) | 25, 787 |
| BauI | CACGAG | 1 cut(s) | 786 |
| BbvCI | CCTCAGC | 1 cut(s) | 256 |
| BbvI | GCAGC | 4 cut(s) | 271, 460, 463, 883 |
| BccI | CCATC | 3 cut(s) | 24, 719, 866 |
| BciVI | GTATCC | 2 cut(s) | 324, 600 |
| BcoDI | GTCTC | 2 cut(s) | 75, 836 |
| BcuI | ACTAGT | 1 cut(s) | 542 |
| BfaI | CTAG | 3 cut(s) | 18, 126, 543 |
| BfmI | CTRYAG | 2 cut(s) | 60, 183 |
| BfuI | GTATCC | 2 cut(s) | 324, 600 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 770 |
| BisI | GCNGC | 4 cut(s) | 285, 474, 477, 897 |
| BlnI | CCTAGG | 1 cut(s) | 17 |
| BlsI | GCNGC | 4 cut(s) | 286, 475, 478, 898 |
| Bme18I | GGWCC | 1 cut(s) | 737 |
| BmeT110I | CYCGRG | 1 cut(s) | 688 |
| BmgT120I | GGNCC | 3 cut(s) | 737, 762, 771 |
| BmiI | GGNNCC | 1 cut(s) | 660 |
| BmrI | ACTGGG | 1 cut(s) | 790 |
| BmsI | GCATC | 2 cut(s) | 571, 908 |
| BmuI | ACTGGG | 1 cut(s) | 790 |
| Bpu10I | CCTNAGC | 1 cut(s) | 256 |
| BpuEI | CTTGAG | 2 cut(s) | 232, 470 |
| BsaBI | GATNNNNATC | 1 cut(s) | 335 |
| BsaI | GGTCTC | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 4 cut(s) | 17, 507, 740, 903 |
| BsaWI | WCCGGW | 1 cut(s) | 661 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 780 |
| Bse1I | ACTGG | 1 cut(s) | 785 |
| Bse3DI | GCAATG | 1 cut(s) | 919 |
| Bse8I | GATNNNNATC | 1 cut(s) | 335 |
| BseAI | TCCGGA | 1 cut(s) | 661 |
| BseDI | CCNNGG | 4 cut(s) | 17, 507, 740, 903 |
| BseGI | GGATG | 4 cut(s) | 517, 730, 892, 899 |
| BseJI | GATNNNNATC | 1 cut(s) | 335 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 780 |
| BseMI | GCAATG | 1 cut(s) | 919 |
| BseMII | CTCAG | 2 cut(s) | 270, 831 |
| BseNI | ACTGG | 1 cut(s) | 785 |
| BseRI | GAGGAG | 1 cut(s) | 91 |
| BseXI | GCAGC | 4 cut(s) | 271, 460, 463, 883 |
| BsgI | GTGCAG | 1 cut(s) | 567 |
| BshFI | GGCC | 5 cut(s) | 16, 207, 700, 764, 773 |
| BsiHKCI | CYCGRG | 1 cut(s) | 688 |
| BsiSI | CCGG | 1 cut(s) | 662 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 780 |
| BsmAI | GTCTC | 2 cut(s) | 75, 836 |
| BsnI | GGCC | 5 cut(s) | 16, 207, 700, 764, 773 |
| Bso31I | GGTCTC | 1 cut(s) | 75 |
| BsoBI | CYCGRG | 1 cut(s) | 688 |
| Bsp1286I | GDGCHC | 2 cut(s) | 25, 787 |
| Bsp13I | TCCGGA | 1 cut(s) | 661 |
| Bsp143I | GATC | 3 cut(s) | 55, 319, 658 |
| Bsp19I | CCATGG | 2 cut(s) | 507, 740 |
| BspANI | GGCC | 5 cut(s) | 16, 207, 700, 764, 773 |
| BspCNI | CTCAG | 2 cut(s) | 269, 832 |
| BspEI | TCCGGA | 1 cut(s) | 661 |
| BspLI | GGNNCC | 1 cut(s) | 660 |
| BspMAI | CTGCAG | 1 cut(s) | 187 |
| BspPI | GGATC | 3 cut(s) | 50, 653, 666 |
| BspQI | GCTCTTC | 1 cut(s) | 435 |
| BspTNI | GGTCTC | 1 cut(s) | 75 |
| BsrDI | GCAATG | 1 cut(s) | 919 |
| BsrI | ACTGG | 1 cut(s) | 785 |
| BssECI | CCNNGG | 4 cut(s) | 17, 507, 740, 903 |
| BssMI | GATC | 3 cut(s) | 55, 319, 658 |
| BssSI | CACGAG | 1 cut(s) | 786 |
| BssT1I | CCWWGG | 3 cut(s) | 17, 507, 740 |
| Bst2BI | CACGAG | 1 cut(s) | 786 |
| Bst6I | CTCTTC | 1 cut(s) | 435 |
| BstC8I | GCNNGC | 3 cut(s) | 447, 829, 864 |
| BstDEI | CTNAG | 2 cut(s) | 256, 840 |
| BstDSI | CCRYGG | 2 cut(s) | 507, 740 |
| BstF5I | GGATG | 4 cut(s) | 517, 730, 892, 899 |
| BstKTI | GATC | 3 cut(s) | 58, 322, 661 |
| BstMAI | GTCTC | 2 cut(s) | 75, 836 |
| BstMBI | GATC | 3 cut(s) | 55, 319, 658 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 620, 770 |
| BstNSI | RCATGY | 2 cut(s) | 614, 831 |
| BstSFI | CTRYAG | 2 cut(s) | 60, 183 |
| BstV1I | GCAGC | 4 cut(s) | 271, 460, 463, 883 |
| BstX2I | RGATCY | 1 cut(s) | 658 |
| BstYI | RGATCY | 1 cut(s) | 658 |
| BsuI | GTATCC | 2 cut(s) | 324, 600 |
| BsuRI | GGCC | 5 cut(s) | 16, 207, 700, 764, 773 |
| BtgI | CCRYGG | 2 cut(s) | 507, 740 |
| BtsCI | GGATG | 4 cut(s) | 517, 730, 892, 899 |
| Cac8I | GCNNGC | 3 cut(s) | 447, 829, 864 |
| Cfr13I | GGNCC | 3 cut(s) | 737, 762, 771 |
| CviAII | CATG | 4 cut(s) | 508, 611, 741, 828 |
| DdeI | CTNAG | 2 cut(s) | 256, 840 |
| DpnI | GATC | 3 cut(s) | 57, 321, 660 |
| DpnII | GATC | 3 cut(s) | 55, 319, 658 |
| DraI | TTTAAA | 2 cut(s) | 171, 556 |
| Eam1104I | CTCTTC | 1 cut(s) | 435 |
| EarI | CTCTTC | 1 cut(s) | 435 |
| Eco130I | CCWWGG | 3 cut(s) | 17, 507, 740 |
| Eco147I | AGGCCT | 2 cut(s) | 16, 700 |
| Eco24I | GRGCYC | 2 cut(s) | 25, 787 |
| Eco31I | GGTCTC | 1 cut(s) | 75 |
| Eco47I | GGWCC | 1 cut(s) | 737 |
| Eco88I | CYCGRG | 1 cut(s) | 688 |
| EcoO109I | RGGNCCY | 1 cut(s) | 762 |
| EcoRI | GAATTC | 1 cut(s) | 362 |
| EcoT14I | CCWWGG | 3 cut(s) | 17, 507, 740 |
| EcoT38I | GRGCYC | 2 cut(s) | 25, 787 |
| ErhI | CCWWGG | 3 cut(s) | 17, 507, 740 |
| FaeI | CATG | 4 cut(s) | 511, 614, 744, 831 |
| FatI | CATG | 4 cut(s) | 507, 610, 740, 827 |
| Fnu4HI | GCNGC | 4 cut(s) | 285, 474, 477, 897 |
| FokI | GGATG | 4 cut(s) | 524, 737, 886, 899 |
| FriOI | GRGCYC | 2 cut(s) | 25, 787 |
| Fsp4HI | GCNGC | 4 cut(s) | 285, 474, 477, 897 |
| FspBI | CTAG | 3 cut(s) | 18, 126, 543 |
| GluI | GCNGC | 4 cut(s) | 285, 474, 477, 897 |
| HaeIII | GGCC | 5 cut(s) | 16, 207, 700, 764, 773 |
| HapII | CCGG | 1 cut(s) | 662 |
| Hin1II | CATG | 4 cut(s) | 511, 614, 744, 831 |
| HindIII | AAGCTT | 2 cut(s) | 398, 810 |
| HinfI | GANTC | 5 cut(s) | 143, 153, 503, 673, 805 |
| HpaII | CCGG | 1 cut(s) | 662 |
| HphI | GGTGA | 1 cut(s) | 727 |
| Hpy166II | GTNNAC | 1 cut(s) | 464 |
| Hpy188I | TCNGA | 4 cut(s) | 324, 643, 841, 907 |
| Hpy188III | TCNNGA | 6 cut(s) | 39, 200, 249, 578, 662, 788 |
| Hpy8I | GTNNAC | 1 cut(s) | 464 |
| Hpy99I | CGWCG | 1 cut(s) | 30 |
| HpyAV | CCTTC | 5 cut(s) | 197, 491, 628, 711, 817 |
| HpyCH4IV | ACGT | 1 cut(s) | 469 |
| HpyCH4V | TGCA | 8 cut(s) | 185, 287, 548, 584, 831, 866, 899, 912 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 620, 770 |
| HpyF3I | CTNAG | 2 cut(s) | 256, 840 |
| HpySE526I | ACGT | 1 cut(s) | 469 |
| Hsp92II | CATG | 4 cut(s) | 511, 614, 744, 831 |
| Kpn2I | TCCGGA | 1 cut(s) | 661 |
| Kzo9I | GATC | 3 cut(s) | 55, 319, 658 |
| LguI | GCTCTTC | 1 cut(s) | 435 |
| LpnPI | CCDG | 9 cut(s) | 24, 195, 213, 534, 675, 696, 720, 745, 766 |
| Lsp1109I | GCAGC | 4 cut(s) | 271, 460, 463, 883 |
| LweI | GCATC | 2 cut(s) | 571, 908 |
| MaeI | CTAG | 3 cut(s) | 18, 126, 543 |
| MaeII | ACGT | 1 cut(s) | 469 |
| MaeIII | GTNAC | 1 cut(s) | 788 |
| MalI | GATC | 3 cut(s) | 57, 321, 660 |
| MboI | GATC | 3 cut(s) | 55, 319, 658 |
| MboII | GAAGA | 5 cut(s) | 143, 200, 452, 640, 643 |
| MflI | RGATCY | 1 cut(s) | 658 |
| MhlI | GDGCHC | 2 cut(s) | 25, 787 |
| MluCI | AATT | 4 cut(s) | 172, 238, 362, 857 |
| MroI | TCCGGA | 1 cut(s) | 661 |
| MroXI | GAANNNNTTC | 1 cut(s) | 46 |
| MseI | TTAA | 5 cut(s) | 170, 531, 555, 776, 919 |
| MslI | CAYNNNNRTG | 1 cut(s) | 615 |
| MspI | CCGG | 1 cut(s) | 662 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 620, 770 |
| NcoI | CCATGG | 2 cut(s) | 507, 740 |
| NdeII | GATC | 3 cut(s) | 55, 319, 658 |
| NlaIII | CATG | 4 cut(s) | 511, 614, 744, 831 |
| NlaIV | GGNNCC | 1 cut(s) | 660 |
| NmuCI | GTSAC | 1 cut(s) | 788 |
| NspI | RCATGY | 2 cut(s) | 614, 831 |
| PaeI | GCATGC | 1 cut(s) | 831 |
| PceI | AGGCCT | 2 cut(s) | 16, 700 |
| PciSI | GCTCTTC | 1 cut(s) | 435 |
| PdmI | GAANNNNTTC | 1 cut(s) | 46 |
| PfeI | GAWTC | 5 cut(s) | 143, 153, 503, 673, 805 |
| PkrI | GCNGC | 4 cut(s) | 286, 475, 478, 898 |
| PspN4I | GGNNCC | 1 cut(s) | 660 |
| PspPI | GGNCC | 3 cut(s) | 737, 762, 771 |
| PstI | CTGCAG | 1 cut(s) | 187 |
| PsuI | RGATCY | 1 cut(s) | 658 |
| RseI | CAYNNNNRTG | 1 cut(s) | 615 |
| SapI | GCTCTTC | 1 cut(s) | 435 |
| SaqAI | TTAA | 5 cut(s) | 170, 531, 555, 776, 919 |
| SatI | GCNGC | 4 cut(s) | 285, 474, 477, 897 |
| Sau3AI | GATC | 3 cut(s) | 55, 319, 658 |
| Sau96I | GGNCC | 3 cut(s) | 737, 762, 771 |
| SduI | GDGCHC | 2 cut(s) | 25, 787 |
| SfaNI | GCATC | 2 cut(s) | 571, 908 |
| SfcI | CTRYAG | 2 cut(s) | 60, 183 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 770 |
| SinI | GGWCC | 1 cut(s) | 737 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 615 |
| SmlI | CTYRAG | 2 cut(s) | 247, 485 |
| SmoI | CTYRAG | 2 cut(s) | 247, 485 |
| SpeI | ACTAGT | 1 cut(s) | 542 |
| SphI | GCATGC | 1 cut(s) | 831 |
| Sse9I | AATT | 4 cut(s) | 172, 238, 362, 857 |
| SseBI | AGGCCT | 2 cut(s) | 16, 700 |
| SspMI | CTAG | 3 cut(s) | 18, 126, 543 |
| StuI | AGGCCT | 2 cut(s) | 16, 700 |
| StyI | CCWWGG | 3 cut(s) | 17, 507, 740 |
| TaiI | ACGT | 1 cut(s) | 472 |
| TaqI | TCGA | 1 cut(s) | 25 |
| TasI | AATT | 4 cut(s) | 172, 238, 362, 857 |
| TfiI | GAWTC | 5 cut(s) | 143, 153, 503, 673, 805 |
| Tru1I | TTAA | 5 cut(s) | 170, 531, 555, 776, 919 |
| Tru9I | TTAA | 5 cut(s) | 170, 531, 555, 776, 919 |
| TseFI | GTSAC | 1 cut(s) | 788 |
| TseI | GCWGC | 4 cut(s) | 284, 473, 476, 896 |
| Tsp45I | GTSAC | 1 cut(s) | 788 |
| TspDTI | ATGAA | 6 cut(s) | 156, 340, 375, 443, 633, 903 |
| TspGWI | ACGGA | 1 cut(s) | 88 |
| VpaK11BI | GGWCC | 1 cut(s) | 737 |
| XapI | RAATTY | 3 cut(s) | 172, 238, 362 |
| XceI | RCATGY | 2 cut(s) | 614, 831 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 747 |
| XmaJI | CCTAGG | 1 cut(s) | 17 |
| XmnI | GAANNNNTTC | 1 cut(s) | 46 |
| XspI | CTAG | 3 cut(s) | 18, 126, 543 |