RLG00000019409

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000089
Physical Location & Seq
Reverse (-)
51671714 .. 51679700
7987 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019409

Sequence Viewer

Length: 1137 bp
ATGCTTCCCGATGCGAGATTAGGGTCTTGTAGTTTGGATTGCATTGGATCTGCATACTTAATCTCAGAGGGAAGTTCAAATTCTCTCGAAGCACCTGCTAGTATAGGAACTCAAGATGCGACAAATTCAGAAATTTCAAACAGAAAACCTAGAGGTAAGGCAAAGGCATTGGACAAAGGAAAAGGAATAGAACCTATTGAAGTGGAATTCAATGAAAGAAGTCAGCCTTACGGGAAACAGGCAGCTAGATTTGCTACTTTCCTTGGTGTCACAGCAAGAGAACTGGTGCCATTAACAATTCCCTCCTGGACTGGGAAAGCAATGTCAGATGAATTCAAAACTGAAATCTGGAAACACATCACTACTTATTACATTGTGGACGAGTGTCACAAGAAAGTAATTTTTCAAAGAATGTCTAAGCTTTGGCGAGATCATAGAAGCTTGACATTAAAAGAAGTAATGAAGCAAGCTGAATTGGTAGGCCTACAAACAGCTGCTGCCATGTGCAAACCTGATAATATACATTCTATGGATGAGTGGTTAAGTTTTATCAAATCCAGGATGACTCCAGCGTTTATGGAAAAGTGTGAAAAGTTTAGACGGATGAGAGAACGAAAAACTTTACTTCATAGGACAAGTAGAAAAAGCTTTGCCTGCATTGAGGATGAATTGAAGCAAAAGAGTGACAAACCTGATTCAATAACAAGGTGTGATGTGTGGCTTCATGCTTATGAAGCAAAGAAGAAGGATTCAAGTGAAGATGTTGAAGATCCAGAAGTAGTGAAACAAGTCAAACAAAACATGGCAGAACAAGTGACTTTGCAAACTCGTTCTGTCAACGATGATGCTGTTTCTAAAGTTTTAGGACCTGATCGACGAGGGCGAGTACGTGGATATGGATTTGGAGCACTTCCTTCGAAGGTAGATGGTCAAACATTTGTGGGCATTGAGATATCTTGCCGGCAAGTTGTTGCCGGCGACCTTCTTTTGCCTCACCGACTTGGCCAACCTGTGTCTGACCTACGACTCGAAGATCCATGGTGCCAACAAGCTCGCGTCGCTCCACCAGTGCTTGTAGATGTTCAAGACGATTTGGCAAAATTTGCGCCCAGTTGGATTTGTGTTTGTCGAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

379

Amino Acids

42.62

Weight (kDa)

8.66

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 178 - 302 9.8e-18 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 103
Acc36I ACCTGC 1 cut(s) 103
AccB1I GGYRCC 2 cut(s) 286, 1041
AccII CGCG 1 cut(s) 1056
AclWI GGATC 3 cut(s) 55, 764, 1028
AcoI YGGCCR 1 cut(s) 1003
AcsI RAATTY 6 cut(s) 79, 124, 132, 206, 332, 1100
AfaI GTAC 1 cut(s) 888
AfiI CCNNNNNNNGG 1 cut(s) 312
AjnI CCWGG 2 cut(s) 305, 557
AluBI AGCT 7 cut(s) 245, 421, 441, 470, 494, 648, 1052
AluI AGCT 7 cut(s) 245, 421, 441, 470, 494, 648, 1052
Alw21I GWGCWC 1 cut(s) 910
AlwI GGATC 3 cut(s) 55, 764, 1028
AlwNI CAGNNNCTG 1 cut(s) 497
AoxI GGCC 2 cut(s) 481, 1003
ApeKI GCWGC 3 cut(s) 242, 494, 497
ApoI RAATTY 6 cut(s) 79, 124, 132, 206, 332, 1100
AspLEI GCGC 1 cut(s) 1108
AspS9I GGNCC 1 cut(s) 866
AsuHPI GGTGA 1 cut(s) 986
AsuII TTCGAA 1 cut(s) 917
AvaII GGWCC 1 cut(s) 866
BalI TGGCCA 1 cut(s) 1005
BanI GGYRCC 2 cut(s) 286, 1041
Bbv12I GWGCWC 1 cut(s) 910
BbvI GCAGC 3 cut(s) 254, 481, 484
BccI CCATC 1 cut(s) 920
BcgI CGANNNNNNTGC 4 cut(s) 77, 111, 897, 931
BciT130I CCWGG 2 cut(s) 307, 559
BfaI CTAG 3 cut(s) 99, 150, 246
BfuAI ACCTGC 1 cut(s) 103
BisI GCNGC 3 cut(s) 243, 495, 498
BlsI GCNGC 3 cut(s) 244, 496, 499
Bme1390I CCNGG 2 cut(s) 307, 559
Bme18I GGWCC 1 cut(s) 866
BmgT120I GGNCC 1 cut(s) 866
BmiI GGNNCC 2 cut(s) 288, 1043
BmrFI CCNGG 2 cut(s) 307, 559
BmrI ACTGGG 2 cut(s) 321, 1104
BmsI GCATC 2 cut(s) 106, 835
BmuI ACTGGG 2 cut(s) 321, 1104
BoxI GACNNNNGTC 1 cut(s) 384
BpmI CTGGAG 1 cut(s) 552
Bpu14I TTCGAA 1 cut(s) 917
BpuEI CTTGAG 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 890
BsaJI CCNNGG 2 cut(s) 262, 1037
Bsc4I CCNNNNNNNGG 1 cut(s) 312
Bse118I RCCGGY 2 cut(s) 960, 974
Bse1I ACTGG 4 cut(s) 288, 316, 1067, 1110
Bse3DI GCAATG 1 cut(s) 327
BseBI CCWGG 2 cut(s) 307, 559
BseDI CCNNGG 2 cut(s) 262, 1037
BseGI GGATG 4 cut(s) 538, 567, 609, 670
BseLI CCNNNNNNNGG 1 cut(s) 312
BseMI GCAATG 1 cut(s) 327
BseMII CTCAG 1 cut(s) 78
BseNI ACTGG 4 cut(s) 288, 316, 1067, 1110
BseXI GCAGC 3 cut(s) 254, 481, 484
Bsh1236I CGCG 1 cut(s) 1056
BshFI GGCC 2 cut(s) 483, 1005
BshNI GGYRCC 2 cut(s) 286, 1041
BsiHKAI GWGCWC 1 cut(s) 910
BsiSI CCGG 2 cut(s) 961, 975
BslI CCNNNNNNNGG 1 cut(s) 312
BsnI GGCC 2 cut(s) 483, 1005
Bsp119I TTCGAA 1 cut(s) 917
Bsp1286I GDGCHC 1 cut(s) 910
Bsp143I GATC 5 cut(s) 47, 430, 769, 871, 1033
Bsp19I CCATGG 1 cut(s) 1037
BspANI GGCC 2 cut(s) 483, 1005
BspCNI CTCAG 1 cut(s) 77
BspFNI CGCG 1 cut(s) 1056
BspLI GGNNCC 2 cut(s) 288, 1043
BspMI ACCTGC 1 cut(s) 103
BspPI GGATC 3 cut(s) 55, 764, 1028
BspT104I TTCGAA 1 cut(s) 917
BspT107I GGYRCC 2 cut(s) 286, 1041
BsrDI GCAATG 1 cut(s) 327
BsrFI RCCGGY 2 cut(s) 960, 974
BsrI ACTGG 4 cut(s) 288, 316, 1067, 1110
BssAI RCCGGY 2 cut(s) 960, 974
BssECI CCNNGG 2 cut(s) 262, 1037
BssMI GATC 5 cut(s) 47, 430, 769, 871, 1033
BssT1I CCWWGG 2 cut(s) 262, 1037
Bst2UI CCWGG 2 cut(s) 307, 559
BstAPI GCANNNNNTGC 1 cut(s) 1103
BstBAI YACGTR 1 cut(s) 890
BstBI TTCGAA 1 cut(s) 917
BstC8I GCNNGC 5 cut(s) 468, 655, 962, 976, 1054
BstDEI CTNAG 2 cut(s) 64, 417
BstDSI CCRYGG 1 cut(s) 1037
BstF5I GGATG 4 cut(s) 538, 567, 609, 670
BstFNI CGCG 1 cut(s) 1056
BstHHI GCGC 1 cut(s) 1108
BstKTI GATC 5 cut(s) 50, 433, 772, 874, 1036
BstMBI GATC 5 cut(s) 47, 430, 769, 871, 1033
BstMWI GCNNNNNNNGC 5 cut(s) 251, 654, 734, 1058, 1103
BstNI CCWGG 2 cut(s) 307, 559
BstPAI GACNNNNGTC 1 cut(s) 384
BstSCI CCNGG 2 cut(s) 305, 557
BstUI CGCG 1 cut(s) 1056
BstV1I GCAGC 3 cut(s) 254, 481, 484
BstX2I RGATCY 3 cut(s) 47, 769, 1033
BstYI RGATCY 3 cut(s) 47, 769, 1033
BsuRI GGCC 2 cut(s) 483, 1005
BtgI CCRYGG 1 cut(s) 1037
BtsCI GGATG 4 cut(s) 538, 567, 609, 670
BtsIMutI CAGTG 1 cut(s) 1074
BveI ACCTGC 1 cut(s) 103
Cac8I GCNNGC 5 cut(s) 468, 655, 962, 976, 1054
CaiI CAGNNNCTG 1 cut(s) 497
CfoI GCGC 1 cut(s) 1108
Cfr10I RCCGGY 2 cut(s) 960, 974
Cfr13I GGNCC 1 cut(s) 866
CseI GACGC 1 cut(s) 1045
Csp6I GTAC 1 cut(s) 887
CviAII CATG 4 cut(s) 502, 725, 802, 1038
CviQI GTAC 1 cut(s) 887
DdeI CTNAG 2 cut(s) 64, 417
DpnI GATC 5 cut(s) 49, 432, 771, 873, 1035
DpnII GATC 5 cut(s) 47, 430, 769, 871, 1033
EaeI YGGCCR 1 cut(s) 1003
Eco130I CCWWGG 2 cut(s) 262, 1037
Eco147I AGGCCT 1 cut(s) 483
Eco32I GATATC 1 cut(s) 954
Eco47I GGWCC 1 cut(s) 866
EcoO109I RGGNCCY 1 cut(s) 866
EcoRI GAATTC 2 cut(s) 206, 332
EcoRII CCWGG 2 cut(s) 305, 557
EcoRV GATATC 1 cut(s) 954
EcoT14I CCWWGG 2 cut(s) 262, 1037
ErhI CCWWGG 2 cut(s) 262, 1037
FaeI CATG 4 cut(s) 505, 728, 805, 1041
FalI AAGNNNNNCTT 2 cut(s) 211, 243
FatI CATG 4 cut(s) 501, 724, 801, 1037
Fnu4HI GCNGC 3 cut(s) 243, 495, 498
FokI GGATG 4 cut(s) 545, 574, 616, 677
Fsp4HI GCNGC 3 cut(s) 243, 495, 498
FspBI CTAG 3 cut(s) 99, 150, 246
GlaI GCGC 1 cut(s) 1107
GluI GCNGC 3 cut(s) 243, 495, 498
GsuI CTGGAG 1 cut(s) 552
HaeIII GGCC 2 cut(s) 483, 1005
HapII CCGG 2 cut(s) 961, 975
HgaI GACGC 1 cut(s) 1045
HhaI GCGC 1 cut(s) 1108
Hin1II CATG 4 cut(s) 505, 728, 805, 1041
Hin6I GCGC 1 cut(s) 1106
HinP1I GCGC 1 cut(s) 1106
HincII GTYRAC 1 cut(s) 838
HindII GTYRAC 1 cut(s) 838
HindIII AAGCTT 3 cut(s) 419, 439, 646
HinfI GANTC 4 cut(s) 565, 695, 749, 1026
HpaII CCGG 2 cut(s) 961, 975
HphI GGTGA 1 cut(s) 986
Hpy166II GTNNAC 2 cut(s) 379, 838
Hpy188I TCNGA 4 cut(s) 67, 130, 328, 1018
Hpy188III TCNNGA 6 cut(s) 8, 86, 113, 349, 773, 1085
Hpy8I GTNNAC 2 cut(s) 379, 838
Hpy99I CGWCG 2 cut(s) 879, 1061
HpyAV CCTTC 4 cut(s) 739, 913, 924, 992
HpyCH4IV ACGT 1 cut(s) 889
HpyCH4V TGCA 5 cut(s) 42, 53, 507, 657, 823
HpyF10VI GCNNNNNNNGC 5 cut(s) 251, 654, 734, 1058, 1103
HpyF3I CTNAG 2 cut(s) 64, 417
HpySE526I ACGT 1 cut(s) 889
Hsp92II CATG 4 cut(s) 505, 728, 805, 1041
HspAI GCGC 1 cut(s) 1106
KroI GCCGGC 2 cut(s) 960, 974
KroNI GCCGGC 2 cut(s) 962, 976
Kzo9I GATC 5 cut(s) 47, 430, 769, 871, 1033
LmnI GCTCC 2 cut(s) 905, 1066
Lsp1109I GCAGC 3 cut(s) 254, 481, 484
LweI GCATC 2 cut(s) 106, 835
MaeI CTAG 3 cut(s) 99, 150, 246
MaeII ACGT 1 cut(s) 889
MaeIII GTNAC 4 cut(s) 268, 386, 683, 814
MalI GATC 5 cut(s) 49, 432, 771, 873, 1035
MboI GATC 5 cut(s) 47, 430, 769, 871, 1033
MboII GAAGA 4 cut(s) 754, 770, 779, 1043
MflI RGATCY 3 cut(s) 47, 769, 1033
MhlI GDGCHC 1 cut(s) 910
MlsI TGGCCA 1 cut(s) 1005
MluNI TGGCCA 1 cut(s) 1005
MlyI GAGTC 2 cut(s) 559, 1020
MmeI TCCRAC 1 cut(s) 1094
MnlI CCTC 6 cut(s) 61, 146, 313, 655, 872, 1002
Mox20I TGGCCA 1 cut(s) 1005
MroNI GCCGGC 2 cut(s) 960, 974
MscI TGGCCA 1 cut(s) 1005
MseI TTAA 4 cut(s) 59, 293, 449, 542
MslI CAYNNNNRTG 1 cut(s) 729
Msp20I TGGCCA 1 cut(s) 1005
MspA1I CMGCKG 1 cut(s) 494
MspI CCGG 2 cut(s) 961, 975
MspR9I CCNGG 2 cut(s) 307, 559
MvaI CCWGG 2 cut(s) 307, 559
MvnI CGCG 1 cut(s) 1056
MwoI GCNNNNNNNGC 5 cut(s) 251, 654, 734, 1058, 1103
NaeI GCCGGC 2 cut(s) 962, 976
NcoI CCATGG 1 cut(s) 1037
NdeII GATC 5 cut(s) 47, 430, 769, 871, 1033
NgoMIV GCCGGC 2 cut(s) 960, 974
NlaIII CATG 4 cut(s) 505, 728, 805, 1041
NlaIV GGNNCC 2 cut(s) 288, 1043
NmuCI GTSAC 4 cut(s) 268, 386, 683, 814
NspV TTCGAA 1 cut(s) 917
PaqCI CACCTGC 1 cut(s) 103
PceI AGGCCT 1 cut(s) 483
PcsI WCGNNNNNNNCGW 1 cut(s) 880
PdiI GCCGGC 2 cut(s) 962, 976
PfeI GAWTC 2 cut(s) 695, 749
PfoI TCCNGGA 2 cut(s) 305, 557
PkrI GCNGC 3 cut(s) 244, 496, 499
PleI GAGTC 2 cut(s) 559, 1020
PpsI GAGTC 2 cut(s) 559, 1020
Ppu21I YACGTR 1 cut(s) 890
PpuMI RGGWCCY 1 cut(s) 866
PshAI GACNNNNGTC 1 cut(s) 384
Psp5II RGGWCCY 1 cut(s) 866
Psp6I CCWGG 2 cut(s) 305, 557
PspGI CCWGG 2 cut(s) 305, 557
PspN4I GGNNCC 2 cut(s) 288, 1043
PspPI GGNCC 1 cut(s) 866
PspPPI RGGWCCY 1 cut(s) 866
PstNI CAGNNNCTG 1 cut(s) 497
PsuI RGATCY 3 cut(s) 47, 769, 1033
PvuII CAGCTG 1 cut(s) 494
RsaI GTAC 1 cut(s) 888
RsaNI GTAC 1 cut(s) 887
RseI CAYNNNNRTG 1 cut(s) 729
SaqAI TTAA 4 cut(s) 59, 293, 449, 542
SatI GCNGC 3 cut(s) 243, 495, 498
Sau3AI GATC 5 cut(s) 47, 430, 769, 871, 1033
Sau96I GGNCC 1 cut(s) 866
SchI GAGTC 2 cut(s) 559, 1020
ScrFI CCNGG 2 cut(s) 307, 559
SduI GDGCHC 1 cut(s) 910
SfaNI GCATC 2 cut(s) 106, 835
SfuI TTCGAA 1 cut(s) 917
SinI GGWCC 1 cut(s) 866
SmiMI CAYNNNNRTG 1 cut(s) 729
SmlI CTYRAG 1 cut(s) 111
SmoI CTYRAG 1 cut(s) 111
SseBI AGGCCT 1 cut(s) 483
SspMI CTAG 3 cut(s) 99, 150, 246
StuI AGGCCT 1 cut(s) 483
StyD4I CCNGG 2 cut(s) 305, 557
StyI CCWWGG 2 cut(s) 262, 1037
TaiI ACGT 1 cut(s) 892
TaqI TCGA 5 cut(s) 87, 874, 917, 1029, 1129
TfiI GAWTC 2 cut(s) 695, 749
Tru1I TTAA 4 cut(s) 59, 293, 449, 542
Tru9I TTAA 4 cut(s) 59, 293, 449, 542
TscAI CASTG 1 cut(s) 1074
TseFI GTSAC 4 cut(s) 268, 386, 683, 814
TseI GCWGC 3 cut(s) 242, 494, 497
Tsp45I GTSAC 4 cut(s) 268, 386, 683, 814
TspDTI ATGAA 7 cut(s) 228, 345, 476, 617, 681, 713, 747
TspGWI ACGGA 1 cut(s) 616
TspRI CASTG 1 cut(s) 1074
VpaK11BI GGWCC 1 cut(s) 866
XapI RAATTY 6 cut(s) 79, 124, 132, 206, 332, 1100
XspI CTAG 3 cut(s) 99, 150, 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.