DNA-directed 5'-3' RNA polymerase activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 234 |
| AccI | GTMKAC | 1 cut(s) | 39 |
| AclWI | GGATC | 1 cut(s) | 395 |
| AcoI | YGGCCR | 1 cut(s) | 433 |
| AfaI | GTAC | 3 cut(s) | 178, 336, 557 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 304 |
| AhlI | ACTAGT | 1 cut(s) | 110 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 305, 337 |
| AleI | CACNNNNGTG | 1 cut(s) | 111 |
| Alw21I | GWGCWC | 2 cut(s) | 76, 118 |
| Alw26I | GTCTC | 1 cut(s) | 233 |
| Alw44I | GTGCAC | 1 cut(s) | 114 |
| AlwI | GGATC | 1 cut(s) | 395 |
| AoxI | GGCC | 4 cut(s) | 64, 254, 433, 545 |
| ApaLI | GTGCAC | 1 cut(s) | 114 |
| ApeKI | GCWGC | 1 cut(s) | 20 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 468 |
| AspS9I | GGNCC | 1 cut(s) | 307 |
| AsuHPI | GGTGA | 1 cut(s) | 70 |
| AvaII | GGWCC | 1 cut(s) | 307 |
| BaeGI | GKGCMC | 1 cut(s) | 118 |
| BalI | TGGCCA | 1 cut(s) | 435 |
| BbsI | GAAGAC | 1 cut(s) | 320 |
| Bbv12I | GWGCWC | 2 cut(s) | 76, 118 |
| BbvI | GCAGC | 1 cut(s) | 7 |
| BccI | CCATC | 1 cut(s) | 49 |
| BcoDI | GTCTC | 1 cut(s) | 233 |
| BcuI | ACTAGT | 1 cut(s) | 110 |
| BfaI | CTAG | 3 cut(s) | 80, 111, 384 |
| BisI | GCNGC | 1 cut(s) | 21 |
| BlsI | GCNGC | 1 cut(s) | 22 |
| BmcAI | AGTACT | 1 cut(s) | 178 |
| Bme18I | GGWCC | 1 cut(s) | 307 |
| BmgT120I | GGNCC | 1 cut(s) | 307 |
| BmsI | GCATC | 3 cut(s) | 202, 427, 530 |
| BpiI | GAAGAC | 1 cut(s) | 320 |
| BsaJI | CCNNGG | 1 cut(s) | 85 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 304 |
| Bse1I | ACTGG | 1 cut(s) | 184 |
| BseDI | CCNNGG | 1 cut(s) | 85 |
| BseGI | GGATG | 1 cut(s) | 521 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 304 |
| BseMII | CTCAG | 1 cut(s) | 123 |
| BseNI | ACTGG | 1 cut(s) | 184 |
| BseSI | GKGCMC | 1 cut(s) | 118 |
| BseXI | GCAGC | 1 cut(s) | 7 |
| BshFI | GGCC | 4 cut(s) | 66, 256, 435, 547 |
| BsiHKAI | GWGCWC | 2 cut(s) | 76, 118 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 304 |
| BsmAI | GTCTC | 1 cut(s) | 233 |
| BsmI | GAATGC | 1 cut(s) | 16 |
| BsnI | GGCC | 4 cut(s) | 66, 256, 435, 547 |
| Bsp1286I | GDGCHC | 2 cut(s) | 76, 118 |
| Bsp143I | GATC | 1 cut(s) | 400 |
| BspANI | GGCC | 4 cut(s) | 66, 256, 435, 547 |
| BspCNI | CTCAG | 1 cut(s) | 124 |
| BspHI | TCATGA | 1 cut(s) | 472 |
| BspPI | GGATC | 1 cut(s) | 395 |
| BsrI | ACTGG | 1 cut(s) | 184 |
| BssECI | CCNNGG | 1 cut(s) | 85 |
| BssMI | GATC | 1 cut(s) | 400 |
| BssT1I | CCWWGG | 1 cut(s) | 85 |
| Bst4CI | ACNGT | 2 cut(s) | 169, 339 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 424 |
| BstC8I | GCNNGC | 1 cut(s) | 254 |
| BstDEI | CTNAG | 1 cut(s) | 132 |
| BstF5I | GGATG | 1 cut(s) | 521 |
| BstKTI | GATC | 1 cut(s) | 403 |
| BstMAI | GTCTC | 1 cut(s) | 233 |
| BstMBI | GATC | 1 cut(s) | 400 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 20, 262, 424, 498 |
| BstSLI | GKGCMC | 1 cut(s) | 118 |
| BstV1I | GCAGC | 1 cut(s) | 7 |
| BstV2I | GAAGAC | 1 cut(s) | 320 |
| BstX2I | RGATCY | 1 cut(s) | 400 |
| BstYI | RGATCY | 1 cut(s) | 400 |
| BsuRI | GGCC | 4 cut(s) | 66, 256, 435, 547 |
| BtsCI | GGATG | 1 cut(s) | 521 |
| Cac8I | GCNNGC | 1 cut(s) | 254 |
| CciI | TCATGA | 1 cut(s) | 472 |
| Cfr13I | GGNCC | 1 cut(s) | 307 |
| Csp6I | GTAC | 3 cut(s) | 177, 335, 556 |
| CviAII | CATG | 5 cut(s) | 422, 437, 461, 473, 543 |
| CviJI | RGCY | 6 cut(s) | 66, 79, 256, 435, 482, 547 |
| CviKI_1 | RGCY | 6 cut(s) | 66, 79, 256, 435, 482, 547 |
| CviQI | GTAC | 3 cut(s) | 177, 335, 556 |
| DdeI | CTNAG | 1 cut(s) | 132 |
| DpnI | GATC | 1 cut(s) | 402 |
| DpnII | GATC | 1 cut(s) | 400 |
| EaeI | YGGCCR | 1 cut(s) | 433 |
| Eco130I | CCWWGG | 1 cut(s) | 85 |
| Eco147I | AGGCCT | 1 cut(s) | 66 |
| Eco47I | GGWCC | 1 cut(s) | 307 |
| EcoT14I | CCWWGG | 1 cut(s) | 85 |
| EcoT22I | ATGCAT | 1 cut(s) | 523 |
| ErhI | CCWWGG | 1 cut(s) | 85 |
| FaeI | CATG | 5 cut(s) | 425, 440, 464, 476, 546 |
| FatI | CATG | 5 cut(s) | 421, 436, 460, 472, 542 |
| FblI | GTMKAC | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 1 cut(s) | 21 |
| FokI | GGATG | 1 cut(s) | 508 |
| Fsp4HI | GCNGC | 1 cut(s) | 21 |
| FspBI | CTAG | 3 cut(s) | 80, 111, 384 |
| GluI | GCNGC | 1 cut(s) | 21 |
| HaeIII | GGCC | 4 cut(s) | 66, 256, 435, 547 |
| Hin1II | CATG | 5 cut(s) | 425, 440, 464, 476, 546 |
| HphI | GGTGA | 1 cut(s) | 70 |
| Hpy166II | GTNNAC | 3 cut(s) | 40, 116, 512 |
| Hpy188III | TCNNGA | 3 cut(s) | 310, 404, 473 |
| Hpy8I | GTNNAC | 3 cut(s) | 40, 116, 512 |
| HpyCH4III | ACNGT | 2 cut(s) | 169, 339 |
| HpyCH4IV | ACGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 8 cut(s) | 49, 116, 215, 377, 418, 460, 521, 542 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 20, 262, 424, 498 |
| HpyF3I | CTNAG | 1 cut(s) | 132 |
| HpySE526I | ACGT | 1 cut(s) | 151 |
| Hsp92II | CATG | 5 cut(s) | 425, 440, 464, 476, 546 |
| Kzo9I | GATC | 1 cut(s) | 400 |
| LpnPI | CCDG | 6 cut(s) | 165, 238, 303, 323, 417, 513 |
| Lsp1109I | GCAGC | 1 cut(s) | 7 |
| LweI | GCATC | 3 cut(s) | 202, 427, 530 |
| MaeI | CTAG | 3 cut(s) | 80, 111, 384 |
| MaeII | ACGT | 1 cut(s) | 151 |
| MaeIII | GTNAC | 1 cut(s) | 127 |
| MalI | GATC | 1 cut(s) | 402 |
| MboI | GATC | 1 cut(s) | 400 |
| MboII | GAAGA | 2 cut(s) | 325, 374 |
| MflI | RGATCY | 1 cut(s) | 400 |
| MhlI | GDGCHC | 2 cut(s) | 76, 118 |
| MlsI | TGGCCA | 1 cut(s) | 435 |
| MluCI | AATT | 4 cut(s) | 44, 93, 258, 568 |
| MluNI | TGGCCA | 1 cut(s) | 435 |
| MmeI | TCCRAC | 2 cut(s) | 188, 425 |
| MnlI | CCTC | 3 cut(s) | 83, 406, 438 |
| Mox20I | TGGCCA | 1 cut(s) | 435 |
| Mph1103I | ATGCAT | 1 cut(s) | 523 |
| MroXI | GAANNNNTTC | 1 cut(s) | 468 |
| MscI | TGGCCA | 1 cut(s) | 435 |
| MseI | TTAA | 3 cut(s) | 96, 273, 344 |
| MslI | CAYNNNNRTG | 2 cut(s) | 111, 563 |
| Msp20I | TGGCCA | 1 cut(s) | 435 |
| Mva1269I | GAATGC | 1 cut(s) | 16 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 20, 262, 424, 498 |
| NdeII | GATC | 1 cut(s) | 400 |
| NlaIII | CATG | 5 cut(s) | 425, 440, 464, 476, 546 |
| NmeAIII | GCCGAG | 1 cut(s) | 55 |
| NsiI | ATGCAT | 1 cut(s) | 523 |
| OliI | CACNNNNGTG | 1 cut(s) | 111 |
| PagI | TCATGA | 1 cut(s) | 472 |
| PceI | AGGCCT | 1 cut(s) | 66 |
| PctI | GAATGC | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 1 cut(s) | 468 |
| PkrI | GCNGC | 1 cut(s) | 22 |
| PsiI | TTATAA | 1 cut(s) | 234 |
| PspPI | GGNCC | 1 cut(s) | 307 |
| PsuI | RGATCY | 1 cut(s) | 400 |
| RsaI | GTAC | 3 cut(s) | 178, 336, 557 |
| RsaNI | GTAC | 3 cut(s) | 177, 335, 556 |
| RseI | CAYNNNNRTG | 2 cut(s) | 111, 563 |
| SaqAI | TTAA | 3 cut(s) | 96, 273, 344 |
| SatI | GCNGC | 1 cut(s) | 21 |
| Sau3AI | GATC | 1 cut(s) | 400 |
| Sau96I | GGNCC | 1 cut(s) | 307 |
| ScaI | AGTACT | 1 cut(s) | 178 |
| SduI | GDGCHC | 2 cut(s) | 76, 118 |
| SetI | ASST | 4 cut(s) | 154, 309, 322, 417 |
| SfaNI | GCATC | 3 cut(s) | 202, 427, 530 |
| SinI | GGWCC | 1 cut(s) | 307 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 111, 563 |
| SpeI | ACTAGT | 1 cut(s) | 110 |
| Sse9I | AATT | 4 cut(s) | 44, 93, 258, 568 |
| SseBI | AGGCCT | 1 cut(s) | 66 |
| SspMI | CTAG | 3 cut(s) | 80, 111, 384 |
| StuI | AGGCCT | 1 cut(s) | 66 |
| StyI | CCWWGG | 1 cut(s) | 85 |
| TaaI | ACNGT | 2 cut(s) | 169, 339 |
| TaiI | ACGT | 1 cut(s) | 154 |
| TasI | AATT | 4 cut(s) | 44, 93, 258, 568 |
| TatI | WGTACW | 3 cut(s) | 176, 334, 555 |
| Tru1I | TTAA | 3 cut(s) | 96, 273, 344 |
| Tru9I | TTAA | 3 cut(s) | 96, 273, 344 |
| TseI | GCWGC | 1 cut(s) | 20 |
| TspDTI | ATGAA | 3 cut(s) | 117, 461, 477 |
| VneI | GTGCAC | 1 cut(s) | 114 |
| VpaK11BI | GGWCC | 1 cut(s) | 307 |
| XmiI | GTMKAC | 1 cut(s) | 39 |
| XmnI | GAANNNNTTC | 1 cut(s) | 468 |
| XspI | CTAG | 3 cut(s) | 80, 111, 384 |
| ZrmI | AGTACT | 1 cut(s) | 178 |
| Zsp2I | ATGCAT | 1 cut(s) | 523 |