FvH4_7g28852

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0013720
Physical Location & Seq
Forward (+)
21321802 .. 21325044
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28852.t1

Sequence Viewer

Length: 2265 bp
ATGAACCGCGCAAAACCCATTTGGCGCCACCTGAGCACCACCGCAGCGCCGCCGAAACCACCGATCACCACCTTGGCCTCAACCAAAGAGCTTCACGCCCACCTCATAAGAACCCACCTCCACAAAGACCCATCTTCAATCTCCGACGTTCTCAGATTTTACACACAATCTCCACCACACTTAAACAAAGCCCATTTCGTCTTCAATCAAATTGAACAACCCACATTGATGGTTTGGAACCTCATGATCCGTGGACTATCGCAGAGTGAAAAACCCAGTGAAGCGATTCGTATGTATAGCCGAATGAGGCAACAAGGATTGGTGGGGAACAATTTGACCTGCATATTCGTTTTCAAGGCCTGTGCTCGAGTTTCGGATGTTGTATGTGGCCAAAAGGCTCAAGCTTGTGCAATGAAGCTTGGGTTTGAATCGTATTTGTATGTTAACAATGCTTTGATTCATATGTATTCGAGTTGTGGTGATTTGGGTTGTGCCCAGAAGGTGTTTGATGAAATGCATGAGAGAGATTTGGTTTCGTGGAATTCGTTGATATGTGGGTATAGTCAGTGTAATAGGTATAAGGAGGTTTTGGGTCTTTTCGAGGCGATGAAGGTGACAGAGAATGTGAGGGCTGATGCGGTGACGATGGTGAAAGTTGTTTTGGCATGTATTCAGCTAGGTGAATGGGGAATTGCGGATTGTATGGTGAAGTATGTGGAAGAAAATAATGTTGGTGTTGATGTTTACTTGGGGAATACGACGATAGATATGTATGGGAGGCGTGGTTTGCCGCGTTTGGCTAGGGAAGTTTTTGATAGGATGCGAGAAAGGAATGTAGTATCATGGAATGCCATGATCAATGGGTATGCCAAAGTGGGGAACTTGGTGGATGCAAGAAAGCTTTTTGATAGGATGCCGAATAGGGATGTGATTTCTTGGACTTCCATGATGACTGGTTATTCTCAAGCTAACCAACATGCTGAGGCGGTGAGTCTTTTTCGCGAAATGATGGCAGCTTATGTGAGGCCGGATAAAGTGACAGTGGCTAGTGTGCTTTCCGCTTGTGCCCATGTTGGTTCACTCGATGTGGGAGAGGCTGTACAAGAGTACATAAGGAAGCATGGAGTGAAAACAGATGTTTATGTAGGGAATGCTTTGATAGATATGTATTGCAAATGTGGGGTGGCTGAGAAGGCATTGGCAGTGTTTCAAGGGATGGATAAGAAAGATTCTATCTCATGGACTTCGGTGATTTCAGGCCTTGCGGTAAACGGTTTTGCAGATTCTGCACATGAGTTCTTCTCACAGATGTTAAAAGAAGGTATTCGACCAACTCATTCAAGTTTTGTAGGGATTCTATTAGCTTGCGCTCATGCTGGATTAGTGGATAAGGGATTGGAATATTTCAAAAGCATGGAAAAGGTTCATGGACTAAAGCCAGAGATGAAACACTACGGGTGTGTTGTGGATCTTTTAAGTCGTTCTGGTAAGCTGCAGGAGGCATACGAATTCATGCAGAATATGCCTATGGTACCAGATATTATAGTATGGAGAATTTTGCTGGGTGCTTGTCAAGTTCATGGGAATTTGGCCTTGGCTGAGATTGTGTCAAACAAGCTTATCGAATTGGACCCATCTAACAGCGGGAACTATATTCTCTCATCAAATAACTATGCACTTTCTCATAGATGGGATGGTGTTGCCAAAATGAGAGGATTGATGGATGAGAGCAACGTGCAGAAGCCATTTGGACCTCAAGATGTTAGGATTCAGATGAAGGCTGTTGGGATATGTGGGAGTGATGTTCACTACCTCAAGGTTCAAGCCATGAGAGTCGCAGATTTTATAGTTAAAGAGCCCATGGTAATTGGGCATGAGTGTGCTGGGATCATAGAGGAATTTGGGAGTGAGGATATGAAGTTTTTCGCCACTCCACTAGTTTTTGGTTCACTGGCAAACCAGGTTGTCCATCCTGCAGACCTGTGTTTTAAACTGCCAGGGAATGTGAGTTTGGAAGAAGGGGCAATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCCTGTCGCCGAGCTAATGTTGGTCCAGAAACAAATGTTTTGGTTATGGGAGCAGGACCCATAGGGCTTGTTACACTGCTAGCTGCTCGTGCTTTTGGGGCACCGAGAATTGTCATTGCAAACGTGGATGACTATCGTTTATCAGTTGCAAAGACTCTAGGTGCAGATGAGATAGTGAAAGTTTCAACAAACATCCAGGTTTCTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

755

Amino Acids

83.34

Weight (kDa)

7.77

Isoelectric Point (pI)

29.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 74 - 123 3.5e-07 PPR repeat family
PPR_2 PF13041 176 - 216 5.5e-06 PPR repeat family
PPR PF01535 178 - 204 4e-06 PPR repeat
PPR_2 PF13041 277 - 309 1e-07 PPR repeat family
PPR_1 PF12854 277 - 305 3.6e-07 PPR repeat
PPR PF01535 280 - 309 3e-08 PPR repeat
PPR_2 PF13041 308 - 357 8e-10 PPR repeat family
PPR PF01535 311 - 337 4.7e-06 PPR repeat
PPR_2 PF13041 410 - 457 3.4e-06 PPR repeat family
E_motif PF20431 527 - 582 3.2e-13 E motif
ADH_N PF08240 584 - 650 6.4e-11 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 705 - 748 7.4e-06 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 347
Acc65I GGTACC 1 cut(s) 1531
AccB1I GGYRCC 3 cut(s) 24, 1531, 2155
AccII CGCG 3 cut(s) 9, 793, 1002
AclWI GGATC 3 cut(s) 241, 1476, 1895
AcoI YGGCCR 1 cut(s) 388
AcsI RAATTY 5 cut(s) 541, 1508, 1554, 1585, 1898
AcyI GRCGYC 1 cut(s) 25
AfaI GTAC 3 cut(s) 1101, 1109, 1533
AfiI CCNNNNNNNGG 1 cut(s) 876
AhlI ACTAGT 1 cut(s) 1936
AjnI CCWGG 3 cut(s) 1959, 1996, 2250
AjuI GAANNNNNNNTTGG 8 cut(s) 644, 676, 714, 746, 1577, 1609, 1994, 2026
Alw21I GWGCWC 2 cut(s) 38, 367
AlwI GGATC 3 cut(s) 241, 1476, 1895
AlwNI CAGNNNCTG 1 cut(s) 1286
Ama87I CYCGRG 1 cut(s) 366
AoxI GGCC 6 cut(s) 75, 357, 388, 1025, 1258, 1590
ApeKI GCWGC 4 cut(s) 44, 1013, 1492, 2138
ApoI RAATTY 5 cut(s) 541, 1508, 1554, 1585, 1898
Asp700I GAANNNNTTC 4 cut(s) 285, 1323, 1422, 1922
Asp718I GGTACC 1 cut(s) 1531
AspLEI GCGC 4 cut(s) 11, 27, 49, 1370
AspS9I GGNCC 4 cut(s) 1630, 1751, 2078, 2111
AsuHPI GGTGA 9 cut(s) 58, 491, 625, 652, 661, 692, 718, 1000, 1261
AsuNHI GCTAGC 1 cut(s) 2134
AvaI CYCGRG 1 cut(s) 366
AvaII GGWCC 4 cut(s) 1630, 1751, 2078, 2111
BaeGI GKGCMC 3 cut(s) 496, 1069, 2158
BalI TGGCCA 1 cut(s) 390
BanI GGYRCC 3 cut(s) 24, 1531, 2155
BanII GRGCYC 2 cut(s) 1860, 2037
BauI CACGAG 1 cut(s) 2142
BbsI GAAGAC 1 cut(s) 193
Bbv12I GWGCWC 2 cut(s) 38, 367
BbvCI CCTCAGC 1 cut(s) 981
BbvI GCAGC 4 cut(s) 56, 1025, 1479, 2125
BciT130I CCWGG 3 cut(s) 1961, 1998, 2252
BclI TGATCA 1 cut(s) 855
BcuI ACTAGT 1 cut(s) 1936
BfaI CTAG 6 cut(s) 677, 801, 1047, 1937, 2135, 2213
BfmI CTRYAG 2 cut(s) 1493, 1974
BfoI RGCGCY 2 cut(s) 28, 50
BfuAI ACCTGC 1 cut(s) 347
BisI GCNGC 6 cut(s) 45, 50, 791, 1014, 1493, 2139
BlsI GCNGC 6 cut(s) 46, 51, 792, 1015, 1494, 2140
Bme1390I CCNGG 3 cut(s) 1961, 1998, 2252
Bme18I GGWCC 4 cut(s) 1630, 1751, 2078, 2111
BmeT110I CYCGRG 1 cut(s) 366
BmgT120I GGNCC 4 cut(s) 1630, 1751, 2078, 2111
BmiI GGNNCC 6 cut(s) 26, 239, 1533, 1632, 2113, 2157
BmrFI CCNGG 3 cut(s) 1961, 1998, 2252
BmrI ACTGGG 1 cut(s) 270
BmsI GCATC 4 cut(s) 625, 810, 880, 903
BmtI GCTAGC 1 cut(s) 2138
BmuI ACTGGG 1 cut(s) 270
BpiI GAAGAC 1 cut(s) 193
BplI GAGNNNNNCTC 2 cut(s) 1286, 1318
Bpu10I CCTNAGC 2 cut(s) 32, 981
BpuEI CTTGAG 5 cut(s) 384, 948, 1740, 1799, 2059
BsaBI GATNNNNATC 1 cut(s) 2187
BsaHI GRCGYC 1 cut(s) 25
BsaJI CCNNGG 5 cut(s) 72, 250, 1593, 1860, 1997
BsaXI ACNNNNNCTCC 6 cut(s) 154, 184, 769, 799, 1083, 1113
Bsc4I CCNNNNNNNGG 1 cut(s) 876
Bse1I ACTGG 3 cut(s) 276, 958, 1956
Bse3DI GCAATG 3 cut(s) 417, 2031, 2169
Bse8I GATNNNNATC 1 cut(s) 2187
BseBI CCWGG 3 cut(s) 1961, 1998, 2252
BseDI CCNNGG 5 cut(s) 72, 250, 1593, 1860, 1997
BseJI GATNNNNATC 1 cut(s) 2187
BseLI CCNNNNNNNGG 1 cut(s) 876
BseMI GCAATG 3 cut(s) 417, 2031, 2169
BseMII CTCAG 5 cut(s) 23, 166, 972, 1179, 1590
BseNI ACTGG 3 cut(s) 276, 958, 1956
BseSI GKGCMC 3 cut(s) 496, 1069, 2158
BseXI GCAGC 4 cut(s) 56, 1025, 1479, 2125
BseYI CCCAGC 2 cut(s) 1561, 1883
BsgI GTGCAG 3 cut(s) 1272, 1757, 2238
Bsh1236I CGCG 3 cut(s) 9, 793, 1002
BshFI GGCC 6 cut(s) 77, 359, 390, 1027, 1260, 1592
BshNI GGYRCC 3 cut(s) 24, 1531, 2155
BsiHKAI GWGCWC 2 cut(s) 38, 367
BsiHKCI CYCGRG 1 cut(s) 366
BsiSI CCGG 1 cut(s) 1028
BslI CCNNNNNNNGG 1 cut(s) 876
BsmI GAATGC 2 cut(s) 853, 1156
BsnI GGCC 6 cut(s) 77, 359, 390, 1027, 1260, 1592
BsoBI CYCGRG 1 cut(s) 366
Bsp1286I GDGCHC 7 cut(s) 38, 367, 496, 1069, 1860, 2037, 2158
Bsp1407I TGTACA 1 cut(s) 1099
Bsp143I GATC 5 cut(s) 63, 246, 855, 1468, 1887
Bsp19I CCATGG 1 cut(s) 1860
Bsp68I TCGCGA 1 cut(s) 1002
BspANI GGCC 6 cut(s) 77, 359, 390, 1027, 1260, 1592
BspCNI CTCAG 5 cut(s) 24, 165, 973, 1180, 1591
BspFNI CGCG 3 cut(s) 9, 793, 1002
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 6 cut(s) 26, 239, 1533, 1632, 2113, 2157
BspMAI CTGCAG 2 cut(s) 1497, 1978
BspMI ACCTGC 1 cut(s) 347
BspOI GCTAGC 1 cut(s) 2138
BspPI GGATC 3 cut(s) 241, 1476, 1895
BspT107I GGYRCC 3 cut(s) 24, 1531, 2155
BsrDI GCAATG 3 cut(s) 417, 2031, 2169
BsrGI TGTACA 1 cut(s) 1099
BsrI ACTGG 3 cut(s) 276, 958, 1956
BssECI CCNNGG 5 cut(s) 72, 250, 1593, 1860, 1997
BssMI GATC 5 cut(s) 63, 246, 855, 1468, 1887
BssNI GRCGYC 1 cut(s) 25
BssSI CACGAG 1 cut(s) 2142
BssT1I CCWWGG 3 cut(s) 72, 1593, 1860
Bst2BI CACGAG 1 cut(s) 2142
Bst2UI CCWGG 3 cut(s) 1961, 1998, 2252
Bst4CI ACNGT 2 cut(s) 1042, 1274
BstACI GRCGYC 1 cut(s) 25
BstAPI GCANNNNNTGC 2 cut(s) 1286, 1522
BstAUI TGTACA 1 cut(s) 1099
BstC8I GCNNGC 2 cut(s) 1366, 2136
BstDEI CTNAG 5 cut(s) 32, 152, 981, 1188, 1599
BstDSI CCRYGG 2 cut(s) 250, 1860
BstFNI CGCG 3 cut(s) 9, 793, 1002
BstH2I RGCGCY 2 cut(s) 28, 50
BstHHI GCGC 4 cut(s) 11, 27, 49, 1370
BstKTI GATC 5 cut(s) 66, 249, 858, 1471, 1890
BstMBI GATC 5 cut(s) 63, 246, 855, 1468, 1887
BstMWI GCNNNNNNNGC 7 cut(s) 33, 787, 1193, 1286, 1522, 2144, 2153
BstNI CCWGG 3 cut(s) 1961, 1998, 2252
BstNSI RCATGY 2 cut(s) 669, 980
BstSCI CCNGG 3 cut(s) 1959, 1996, 2250
BstSFI CTRYAG 2 cut(s) 1493, 1974
BstSLI GKGCMC 3 cut(s) 496, 1069, 2158
BstUI CGCG 3 cut(s) 9, 793, 1002
BstV1I GCAGC 4 cut(s) 56, 1025, 1479, 2125
BstV2I GAAGAC 1 cut(s) 193
BstX2I RGATCY 1 cut(s) 1468
BstXI CCANNNNNNTGG 1 cut(s) 229
BstYI RGATCY 1 cut(s) 1468
BsuRI GGCC 6 cut(s) 77, 359, 390, 1027, 1260, 1592
BtgI CCRYGG 2 cut(s) 250, 1860
BtgZI GCGATG 1 cut(s) 620
BtsI GCAGTG 2 cut(s) 1209, 2129
BtsIMutI CAGTG 6 cut(s) 283, 572, 1047, 1209, 1949, 2129
BtuMI TCGCGA 1 cut(s) 1002
BveI ACCTGC 1 cut(s) 347
Cac8I GCNNGC 2 cut(s) 1366, 2136
CaiI CAGNNNCTG 1 cut(s) 1286
CciI TCATGA 1 cut(s) 243
CfoI GCGC 4 cut(s) 11, 27, 49, 1370
Cfr13I GGNCC 4 cut(s) 1630, 1751, 2078, 2111
CsiI ACCWGGT 1 cut(s) 1959
Csp6I GTAC 3 cut(s) 1100, 1108, 1532
CviQI GTAC 3 cut(s) 1100, 1108, 1532
DdeI CTNAG 5 cut(s) 32, 152, 981, 1188, 1599
DinI GGCGCC 1 cut(s) 26
DpnI GATC 5 cut(s) 65, 248, 857, 1470, 1889
DpnII GATC 5 cut(s) 63, 246, 855, 1468, 1887
DraI TTTAAA 1 cut(s) 1990
EaeI YGGCCR 1 cut(s) 388
Eco130I CCWWGG 3 cut(s) 72, 1593, 1860
Eco147I AGGCCT 2 cut(s) 359, 1260
Eco24I GRGCYC 2 cut(s) 1860, 2037
Eco47I GGWCC 4 cut(s) 1630, 1751, 2078, 2111
Eco88I CYCGRG 1 cut(s) 366
EcoO109I RGGNCCY 1 cut(s) 2111
EcoRI GAATTC 2 cut(s) 541, 1508
EcoRII CCWGG 3 cut(s) 1959, 1996, 2250
EcoT14I CCWWGG 3 cut(s) 72, 1593, 1860
EcoT22I ATGCAT 1 cut(s) 519
EcoT38I GRGCYC 2 cut(s) 1860, 2037
EgeI GGCGCC 1 cut(s) 26
EheI GGCGCC 1 cut(s) 26
ErhI CCWWGG 3 cut(s) 72, 1593, 1860
FauI CCCGC 1 cut(s) 1637
FauNDI CATATG 1 cut(s) 462
FbaI TGATCA 1 cut(s) 855
Fnu4HI GCNGC 6 cut(s) 45, 50, 791, 1014, 1493, 2139
FriOI GRGCYC 2 cut(s) 1860, 2037
Fsp4HI GCNGC 6 cut(s) 45, 50, 791, 1014, 1493, 2139
FspBI CTAG 6 cut(s) 677, 801, 1047, 1937, 2135, 2213
GlaI GCGC 4 cut(s) 10, 26, 48, 1369
GluI GCNGC 6 cut(s) 45, 50, 791, 1014, 1493, 2139
GsaI CCCAGC 2 cut(s) 1565, 1887
HaeII RGCGCY 2 cut(s) 28, 50
HaeIII GGCC 6 cut(s) 77, 359, 390, 1027, 1260, 1592
HapII CCGG 1 cut(s) 1028
HhaI GCGC 4 cut(s) 11, 27, 49, 1370
Hin1I GRCGYC 1 cut(s) 25
Hin6I GCGC 4 cut(s) 9, 25, 47, 1368
HinP1I GCGC 4 cut(s) 9, 25, 47, 1368
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HindIII AAGCTT 4 cut(s) 402, 416, 899, 1616
HpaI GTTAAC 1 cut(s) 445
HpaII CCGG 1 cut(s) 1028
HphI GGTGA 9 cut(s) 58, 491, 625, 652, 661, 692, 718, 1000, 1261
Hpy166II GTNNAC 7 cut(s) 254, 445, 745, 1079, 1270, 1807, 1949
Hpy188I TCNGA 4 cut(s) 145, 155, 376, 1773
Hpy188III TCNNGA 4 cut(s) 244, 1001, 1757, 2081
Hpy8I GTNNAC 7 cut(s) 254, 445, 745, 1079, 1270, 1807, 1949
Hpy99I CGWCG 2 cut(s) 149, 763
HpyAV CCTTC 6 cut(s) 493, 604, 1186, 1313, 1771, 2012
HpyCH4III ACNGT 2 cut(s) 1042, 1274
HpyCH4IV ACGT 3 cut(s) 147, 1734, 2178
HpyF10VI GCNNNNNNNGC 7 cut(s) 33, 787, 1193, 1286, 1522, 2144, 2153
HpyF3I CTNAG 5 cut(s) 32, 152, 981, 1188, 1599
HpySE526I ACGT 3 cut(s) 147, 1734, 2178
Hsp92I GRCGYC 1 cut(s) 25
HspAI GCGC 4 cut(s) 9, 25, 47, 1368
KasI GGCGCC 1 cut(s) 24
KpnI GGTACC 1 cut(s) 1535
Ksp22I TGATCA 1 cut(s) 855
KspAI GTTAAC 1 cut(s) 445
Kzo9I GATC 5 cut(s) 63, 246, 855, 1468, 1887
LmnI GCTCC 1 cut(s) 2105
Lsp1109I GCAGC 4 cut(s) 56, 1025, 1479, 2125
LweI GCATC 4 cut(s) 625, 810, 880, 903
MabI ACCWGGT 1 cut(s) 1959
MaeI CTAG 6 cut(s) 677, 801, 1047, 1937, 2135, 2213
MaeII ACGT 3 cut(s) 147, 1734, 2178
MaeIII GTNAC 4 cut(s) 613, 640, 1036, 2125
MalI GATC 5 cut(s) 65, 248, 857, 1470, 1889
MboI GATC 5 cut(s) 63, 246, 855, 1468, 1887
MboII GAAGA 5 cut(s) 126, 193, 731, 1291, 2027
MflI RGATCY 1 cut(s) 1468
MhlI GDGCHC 7 cut(s) 38, 367, 496, 1069, 1860, 2037, 2158
MlsI TGGCCA 1 cut(s) 390
MluNI TGGCCA 1 cut(s) 390
Mly113I GGCGCC 1 cut(s) 25
MlyI GAGTC 3 cut(s) 1000, 1842, 2203
MmeI TCCRAC 1 cut(s) 168
Mox20I TGGCCA 1 cut(s) 390
Mph1103I ATGCAT 1 cut(s) 519
MroXI GAANNNNTTC 4 cut(s) 285, 1323, 1422, 1922
MscI TGGCCA 1 cut(s) 390
MseI TTAA 6 cut(s) 182, 444, 1313, 1475, 1851, 1989
MslI CAYNNNNRTG 2 cut(s) 227, 1878
Msp20I TGGCCA 1 cut(s) 390
MspA1I CMGCKG 1 cut(s) 1644
MspI CCGG 1 cut(s) 1028
MspR9I CCNGG 3 cut(s) 1961, 1998, 2252
Mva1269I GAATGC 2 cut(s) 853, 1156
MvaI CCWGG 3 cut(s) 1961, 1998, 2252
MvnI CGCG 3 cut(s) 9, 793, 1002
MwoI GCNNNNNNNGC 7 cut(s) 33, 787, 1193, 1286, 1522, 2144, 2153
NarI GGCGCC 1 cut(s) 25
NcoI CCATGG 1 cut(s) 1860
NdeI CATATG 1 cut(s) 462
NdeII GATC 5 cut(s) 63, 246, 855, 1468, 1887
NheI GCTAGC 1 cut(s) 2134
NlaIV GGNNCC 6 cut(s) 26, 239, 1533, 1632, 2113, 2157
NmeAIII GCCGAG 1 cut(s) 2090
NmuCI GTSAC 3 cut(s) 613, 640, 1036
NruI TCGCGA 1 cut(s) 1002
NsiI ATGCAT 1 cut(s) 519
NspI RCATGY 2 cut(s) 669, 980
PaeR7I CTCGAG 1 cut(s) 366
PagI TCATGA 1 cut(s) 243
PceI AGGCCT 2 cut(s) 359, 1260
PcsI WCGNNNNNNNCGW 1 cut(s) 542
PctI GAATGC 2 cut(s) 853, 1156
PdmI GAANNNNTTC 4 cut(s) 285, 1323, 1422, 1922
PfeI GAWTC 7 cut(s) 286, 428, 457, 1229, 1283, 1354, 1768
PkrI GCNGC 6 cut(s) 46, 51, 792, 1015, 1494, 2140
PleI GAGTC 3 cut(s) 999, 1841, 2203
PluTI GGCGCC 1 cut(s) 28
PpsI GAGTC 3 cut(s) 999, 1841, 2203
PpuMI RGGWCCY 1 cut(s) 2111
Psp5II RGGWCCY 1 cut(s) 2111
Psp6I CCWGG 3 cut(s) 1959, 1996, 2250
PspFI CCCAGC 2 cut(s) 1561, 1883
PspGI CCWGG 3 cut(s) 1959, 1996, 2250
PspN4I GGNNCC 6 cut(s) 26, 239, 1533, 1632, 2113, 2157
PspPI GGNCC 4 cut(s) 1630, 1751, 2078, 2111
PspPPI RGGWCCY 1 cut(s) 2111
PspXI VCTCGAGB 1 cut(s) 366
PstI CTGCAG 2 cut(s) 1497, 1978
PstNI CAGNNNCTG 1 cut(s) 1286
PsuI RGATCY 1 cut(s) 1468
RruI TCGCGA 1 cut(s) 1002
RsaI GTAC 3 cut(s) 1101, 1109, 1533
RsaNI GTAC 3 cut(s) 1100, 1108, 1532
RseI CAYNNNNRTG 2 cut(s) 227, 1878
SaqAI TTAA 6 cut(s) 182, 444, 1313, 1475, 1851, 1989
SatI GCNGC 6 cut(s) 45, 50, 791, 1014, 1493, 2139
Sau3AI GATC 5 cut(s) 63, 246, 855, 1468, 1887
Sau96I GGNCC 4 cut(s) 1630, 1751, 2078, 2111
SchI GAGTC 3 cut(s) 1000, 1842, 2203
ScrFI CCNGG 3 cut(s) 1961, 1998, 2252
SduI GDGCHC 7 cut(s) 38, 367, 496, 1069, 1860, 2037, 2158
SexAI ACCWGGT 1 cut(s) 1959
SfaNI GCATC 4 cut(s) 625, 810, 880, 903
SfcI CTRYAG 2 cut(s) 1493, 1974
SfoI GGCGCC 1 cut(s) 26
Sfr274I CTCGAG 1 cut(s) 366
SinI GGWCC 4 cut(s) 1630, 1751, 2078, 2111
SlaI CTCGAG 1 cut(s) 366
SmiMI CAYNNNNRTG 2 cut(s) 227, 1878
SmlI CTYRAG 6 cut(s) 366, 399, 963, 1755, 1814, 2038
SmoI CTYRAG 6 cut(s) 366, 399, 963, 1755, 1814, 2038
SpeI ACTAGT 1 cut(s) 1936
SseBI AGGCCT 2 cut(s) 359, 1260
SspDI GGCGCC 1 cut(s) 24
SspI AATATT 1 cut(s) 1403
SspMI CTAG 6 cut(s) 677, 801, 1047, 1937, 2135, 2213
StuI AGGCCT 2 cut(s) 359, 1260
StyD4I CCNGG 3 cut(s) 1959, 1996, 2250
StyI CCWWGG 3 cut(s) 72, 1593, 1860
TaaI ACNGT 2 cut(s) 1042, 1274
TaiI ACGT 3 cut(s) 150, 1737, 2181
TaqI TCGA 6 cut(s) 367, 470, 600, 1083, 1327, 1623
TatI WGTACW 2 cut(s) 1099, 1107
TauI GCSGC 2 cut(s) 52, 793
TfiI GAWTC 7 cut(s) 286, 428, 457, 1229, 1283, 1354, 1768
Tru1I TTAA 6 cut(s) 182, 444, 1313, 1475, 1851, 1989
Tru9I TTAA 6 cut(s) 182, 444, 1313, 1475, 1851, 1989
TscAI CASTG 6 cut(s) 283, 572, 1047, 1209, 1956, 2136
TseFI GTSAC 3 cut(s) 613, 640, 1036
TseI GCWGC 4 cut(s) 44, 1013, 1492, 2138
Tsp45I GTSAC 3 cut(s) 613, 640, 1036
TspGWI ACGGA 1 cut(s) 239
TspRI CASTG 6 cut(s) 283, 572, 1047, 1209, 1956, 2136
VpaK11BI GGWCC 4 cut(s) 1630, 1751, 2078, 2111
XapI RAATTY 5 cut(s) 541, 1508, 1554, 1585, 1898
XceI RCATGY 2 cut(s) 669, 980
XhoI CTCGAG 1 cut(s) 366
XmnI GAANNNNTTC 4 cut(s) 285, 1323, 1422, 1922
XspI CTAG 6 cut(s) 677, 801, 1047, 1937, 2135, 2213
Zsp2I ATGCAT 1 cut(s) 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.