pycom07g24060

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0013720
Physical Location & Seq
Forward (+)
24846805 .. 24848631
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g24060.1

Sequence Viewer

Length: 1827 bp
ATGAAACTCGCGAGACCCATTACGCGCCACTTCACCACCTCCACGGTGGTTCAAAAATCAGAGCGAGTGGCTGCCGGACCAATCACCTTGAGTTCAATCAAAGAGCTTCACGCACACCTTATCAGAACCCACCTCCAAAAAGACCCATCATCTTCCATCGCCGAGGTTACCAGAGTTTACGCGCTATCTCCGCCGTATTTAAACAAAGCCCATTTAGTCTTCGATCAAATAGAGCGACCCACATTTTTGGTTTGGAATCATATGATCCGTGGATTGTCACAGAGTGAGAAACCAGGTGAAGCAATTCACATGTATAATCGTATGTACCTTCAAGGATTGGCCGGGAATCATGTGACTTTTATATTCGTTTTCAAGGCTTGTGGTCGAGCTTCTGATATTGGAAATGGGAAAAGGGTCCATGGACATGCGGTCAAACTTGGGTTCGAGTCGTATCTTTTTGTATCCAATGCATTAATTTTAATGTATGCGTCTTGTGGTGGTCTGGGCTTTGCGCATAAACTGTTTGACGGAATGTGTCAGAGAGATTTGGTCTCTTGGAATTCTTTGATATGTGGATATAGTCTGTGCAATAGGTTTAAGGAGGTTTTGGGTCTGTTTAAGGCAATGAGGGCAGGGAATGTGACGGCTGATGCGGTGACGATGGTGAAAGTTATTTTGGCGTGTAATTACTTGGGTGAATGGGAGTTTGCTGATTCTGTGGTTCAGTATATTGAAGAAAATCATGTTAGGATTGATGTTTACTTGGGGAACACTATGATAGATATGTATGGACGGCGTGGTTTGGCGAATTTGGCTTGGGAAGTATTTGATCGGATGCGTGAAAGAAATATAGTTTCGTGGAATGCCATGATCACGGGATATGCAAAAGTGGGAAACTTGGTTAATGCAAGAAAGCTTTTCAATGAGATGCCGAAGAGAAATGTGGTGTCTTGGACTTCCATGATCACTTGTTACTCTCAAGCTAATCAACATACTGAGGCAGTGAGTCTTTTTCAAGAAATGATGGCAGCTGATGTGAGACCGGATGAAATAACCATTGCTAGTGTGCTTTCTGCTTGTGCCCGTGTGGGTTCACTTGATGTGGGAGAGGCTGTCCACGACTACATAAAGAAGCATGGAGTGAAAACAGATAGTTATGTAGGAAATACTTTGATAGATATGTATTGCAAATGTGGGATGGTTGAGAAGGCAATGGAGGTGTTCCAATGGATGGAAAAGAAAGACGCTGTGTCATGGACTTCCGTAATTTCAGGCCTTGCTGTGAACGGTTTTGCAGATTCTGCACTCGAATTCTTCTCGCGGATGCTGAGAGAAGGTGTTCGACCAACTCATGGAACATTTGTTGGGATTTTGTTAGCTTGTGCTCATGCGGGTTTGGTAGAGAAAGGATTGGAATATTTTGAAAGCATGGAAAAGATTCATGGACTGATGCCAGAAATGAAACACTACGGATGTGTTGTGGATCTTTTGAGCCGGTCTGGAAAACTAGAGAAGGCTTATGAGTTCATACAAAATATGCCCGTTGTTCCAAATGTCGTAGTATGGAGGATATTGCTGAGTGCTTGCAAGGTTCATGGAAATGTGGCCCTAGCTGAGAGTGTCACAGCCAAGCTTGTTGAACTGGATCCTTCTAACAGTGGGAATTACATTCTCTCATCGAGTACTTACGCAGGTTCGGATAGATGGGATGATGCTATGAGAATGAGAGAATTGATGGGTGAGAGCAAAGTGCAAAAGCCATTTGGTCGTAGTGCCATCGAAATAGACGGCATATTTTCGAACTCTCAGAATTTGGGACTCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

609

Amino Acids

67.84

Weight (kDa)

8.29

Isoelectric Point (pI)

34.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 84 - 128 5.8e-07 PPR repeat family
PPR_2 PF13041 182 - 224 3.5e-06 PPR repeat family
PPR_long PF17177 269 - 367 3.6e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 282 - 315 5.9e-09 PPR repeat family
PPR PF01535 285 - 315 2.9e-08 PPR repeat
PPR_2 PF13041 313 - 362 4.1e-11 PPR repeat family
PPR PF01535 316 - 343 5.4e-07 PPR repeat
TPR_24 PF23276 351 - 415 1.4e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 388 - 414 4.8e-07 PPR repeat family
PPR_1 PF12854 389 - 412 8.5e-07 PPR repeat
PPR_2 PF13041 415 - 462 1.3e-06 PPR repeat family
PPR PF01535 417 - 447 7.5e-07 PPR repeat
E_motif PF20431 532 - 594 5.2e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 513
Acc36I ACCTGC 1 cut(s) 1682
AccB7I CCANNNNNTGG 2 cut(s) 1231, 1352
AccII CGCG 4 cut(s) 11, 25, 182, 1321
AciI CCGC 5 cut(s) 191, 428, 653, 1321, 1391
AclWI GGATC 4 cut(s) 259, 1491, 1640, 1653
AcoI YGGCCR 1 cut(s) 339
AcsI RAATTY 4 cut(s) 559, 808, 1310, 1810
AdeI CACNNNGTG 1 cut(s) 284
AfaI GTAC 2 cut(s) 326, 1684
AfiI CCNNNNNNNGG 2 cut(s) 1231, 1352
AflIII ACRYGT 1 cut(s) 309
AgsI TTSAA 9 cut(s) 53, 96, 332, 373, 734, 922, 1016, 1424, 1640
AhdI GACNNNNNGTC 2 cut(s) 428, 1249
AjnI CCWGG 1 cut(s) 292
AjuI GAANNNNNNNTTGG 2 cut(s) 659, 691
AluBI AGCT 8 cut(s) 106, 389, 916, 983, 1031, 1379, 1613, 1633
AluI AGCT 8 cut(s) 106, 389, 916, 983, 1031, 1379, 1613, 1633
Alw21I GWGCWC 1 cut(s) 1387
Alw26I GTCTC 3 cut(s) 7, 556, 1033
AlwI GGATC 4 cut(s) 259, 1491, 1640, 1653
AlwNI CAGNNNCTG 1 cut(s) 1301
AoxI GGCC 3 cut(s) 339, 1273, 1605
ApeKI GCWGC 2 cut(s) 71, 1028
ApoI RAATTY 4 cut(s) 559, 808, 1310, 1810
AseI ATTAAT 1 cut(s) 473
Asp700I GAANNNNTTC 3 cut(s) 303, 1338, 1437
AspLEI GCGC 3 cut(s) 27, 184, 514
AspS9I GGNCC 3 cut(s) 77, 415, 1606
AsuC2I CCSGG 1 cut(s) 343
AsuHPI GGTGA 7 cut(s) 25, 76, 308, 667, 676, 707, 1751
AsuII TTCGAA 1 cut(s) 1799
AvaII GGWCC 2 cut(s) 77, 415
BaeGI GKGCMC 1 cut(s) 1084
BamHI GGATCC 1 cut(s) 1645
BbsI GAAGAC 1 cut(s) 211
Bbv12I GWGCWC 1 cut(s) 1387
BbvI GCAGC 2 cut(s) 58, 1040
BccI CCATC 9 cut(s) 154, 164, 655, 1018, 1192, 1225, 1698, 1729, 1784
BceAI ACGGC 4 cut(s) 178, 660, 809, 1804
BciT130I CCWGG 1 cut(s) 294
BciVI GTATCC 1 cut(s) 472
BclI TGATCA 2 cut(s) 870, 963
BcnI CCSGG 1 cut(s) 343
BcoDI GTCTC 3 cut(s) 7, 556, 1033
BfaI CTAG 3 cut(s) 1062, 1508, 1610
BfuAI ACCTGC 1 cut(s) 1682
BfuI GTATCC 1 cut(s) 472
BisI GCNGC 2 cut(s) 72, 1029
BlsI GCNGC 2 cut(s) 73, 1030
BmcAI AGTACT 1 cut(s) 1684
Bme1390I CCNGG 2 cut(s) 294, 343
Bme18I GGWCC 2 cut(s) 77, 415
BmeRI GACNNNNNGTC 2 cut(s) 428, 1249
BmgT120I GGNCC 3 cut(s) 77, 415, 1606
BmiI GGNNCC 2 cut(s) 416, 1647
BmrFI CCNGG 2 cut(s) 294, 343
BmsI GCATC 6 cut(s) 640, 825, 918, 1314, 1440, 1702
BpiI GAAGAC 1 cut(s) 211
Bpu14I TTCGAA 1 cut(s) 1799
BpuEI CTTGAG 2 cut(s) 109, 963
BpuMI CCSGG 1 cut(s) 343
BsaI GGTCTC 3 cut(s) 7, 556, 1033
BsaJI CCNNGG 4 cut(s) 42, 162, 268, 418
BsaWI WCCGGW 1 cut(s) 1042
BsaXI ACNNNNNCTCC 2 cut(s) 1098, 1128
Bsc4I CCNNNNNNNGG 2 cut(s) 1231, 1352
Bse118I RCCGGY 1 cut(s) 1494
Bse1I ACTGG 1 cut(s) 1647
Bse3DI GCAATG 3 cut(s) 630, 1056, 1218
BseBI CCWGG 1 cut(s) 294
BseDI CCNNGG 4 cut(s) 42, 162, 268, 418
BseGI GGATG 7 cut(s) 840, 1051, 1203, 1236, 1329, 1478, 1714
BseLI CCNNNNNNNGG 2 cut(s) 1231, 1352
BseMI GCAATG 3 cut(s) 630, 1056, 1218
BseMII CTCAG 5 cut(s) 987, 1319, 1568, 1605, 1820
BseNI ACTGG 1 cut(s) 1647
BseSI GKGCMC 1 cut(s) 1084
BseXI GCAGC 2 cut(s) 58, 1040
BsgI GTGCAG 1 cut(s) 1287
Bsh1236I CGCG 4 cut(s) 11, 25, 182, 1321
BshFI GGCC 3 cut(s) 341, 1275, 1607
BsiHKAI GWGCWC 1 cut(s) 1387
BsiSI CCGG 4 cut(s) 75, 342, 1043, 1495
BslI CCNNNNNNNGG 2 cut(s) 1231, 1352
BsmAI GTCTC 3 cut(s) 7, 556, 1033
BsmI GAATGC 1 cut(s) 868
BsnI GGCC 3 cut(s) 341, 1275, 1607
Bso31I GGTCTC 3 cut(s) 7, 556, 1033
Bsp119I TTCGAA 1 cut(s) 1799
Bsp1286I GDGCHC 2 cut(s) 1084, 1387
Bsp143I GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
Bsp19I CCATGG 1 cut(s) 418
Bsp68I TCGCGA 1 cut(s) 11
BspACI CCGC 5 cut(s) 191, 428, 653, 1321, 1391
BspANI GGCC 3 cut(s) 341, 1275, 1607
BspCNI CTCAG 5 cut(s) 988, 1320, 1569, 1606, 1819
BspFNI CGCG 4 cut(s) 11, 25, 182, 1321
BspLI GGNNCC 2 cut(s) 416, 1647
BspMI ACCTGC 1 cut(s) 1682
BspPI GGATC 4 cut(s) 259, 1491, 1640, 1653
BspT104I TTCGAA 1 cut(s) 1799
BspTNI GGTCTC 3 cut(s) 7, 556, 1033
BsrDI GCAATG 3 cut(s) 630, 1056, 1218
BsrFI RCCGGY 1 cut(s) 1494
BsrI ACTGG 1 cut(s) 1647
BssAI RCCGGY 1 cut(s) 1494
BssECI CCNNGG 4 cut(s) 42, 162, 268, 418
BssMI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
BssT1I CCWWGG 1 cut(s) 418
Bst2UI CCWGG 1 cut(s) 294
Bst4CI ACNGT 4 cut(s) 46, 522, 1289, 1658
Bst6I CTCTTC 1 cut(s) 929
BstAPI GCANNNNNTGC 1 cut(s) 1301
BstBI TTCGAA 1 cut(s) 1799
BstC8I GCNNGC 1 cut(s) 1585
BstDEI CTNAG 5 cut(s) 996, 1328, 1577, 1614, 1806
BstDSI CCRYGG 3 cut(s) 42, 268, 418
BstEII GGTNACC 1 cut(s) 166
BstF5I GGATG 7 cut(s) 840, 1051, 1203, 1236, 1329, 1478, 1714
BstFNI CGCG 4 cut(s) 11, 25, 182, 1321
BstHHI GCGC 3 cut(s) 27, 184, 514
BstKTI GATC 7 cut(s) 226, 267, 832, 873, 966, 1486, 1648
BstMAI GTCTC 3 cut(s) 7, 556, 1033
BstMBI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
BstMWI GCNNNNNNNGC 4 cut(s) 190, 629, 812, 1301
BstNI CCWGG 1 cut(s) 294
BstNSI RCATGY 2 cut(s) 313, 428
BstPI GGTNACC 1 cut(s) 166
BstSCI CCNGG 2 cut(s) 292, 341
BstSLI GKGCMC 1 cut(s) 1084
BstUI CGCG 4 cut(s) 11, 25, 182, 1321
BstV1I GCAGC 2 cut(s) 58, 1040
BstV2I GAAGAC 1 cut(s) 211
BstX2I RGATCY 2 cut(s) 1483, 1645
BstXI CCANNNNNNTGG 1 cut(s) 247
BstYI RGATCY 2 cut(s) 1483, 1645
BsuI GTATCC 1 cut(s) 472
BsuRI GGCC 3 cut(s) 341, 1275, 1607
BtgI CCRYGG 3 cut(s) 42, 268, 418
BtgZI GCGATG 1 cut(s) 142
BtsCI GGATG 7 cut(s) 840, 1051, 1203, 1236, 1329, 1478, 1714
BtsI GCAGTG 1 cut(s) 1008
BtsIMutI CAGTG 2 cut(s) 1008, 1663
BtuMI TCGCGA 1 cut(s) 11
BveI ACCTGC 1 cut(s) 1682
Cac8I GCNNGC 1 cut(s) 1585
CaiI CAGNNNCTG 1 cut(s) 1301
CfoI GCGC 3 cut(s) 27, 184, 514
Cfr10I RCCGGY 1 cut(s) 1494
Cfr13I GGNCC 3 cut(s) 77, 415, 1606
CseI GACGC 2 cut(s) 477, 1253
CsiI ACCWGGT 1 cut(s) 292
Csp6I GTAC 2 cut(s) 325, 1683
CspCI CAANNNNNGTGG 2 cut(s) 361, 396
CviQI GTAC 2 cut(s) 325, 1683
DdeI CTNAG 5 cut(s) 996, 1328, 1577, 1614, 1806
DpnI GATC 7 cut(s) 225, 266, 831, 872, 965, 1485, 1647
DpnII GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
DraI TTTAAA 1 cut(s) 201
DraIII CACNNNGTG 1 cut(s) 284
DriI GACNNNNNGTC 2 cut(s) 428, 1249
EaeI YGGCCR 1 cut(s) 339
Eam1104I CTCTTC 1 cut(s) 929
Eam1105I GACNNNNNGTC 2 cut(s) 428, 1249
EarI CTCTTC 1 cut(s) 929
EciI GGCGGA 1 cut(s) 180
Eco130I CCWWGG 1 cut(s) 418
Eco147I AGGCCT 1 cut(s) 1275
Eco31I GGTCTC 3 cut(s) 7, 556, 1033
Eco47I GGWCC 2 cut(s) 77, 415
Eco91I GGTNACC 1 cut(s) 166
EcoO65I GGTNACC 1 cut(s) 166
EcoRI GAATTC 2 cut(s) 559, 1310
EcoRII CCWGG 1 cut(s) 292
EcoT14I CCWWGG 1 cut(s) 418
EcoT22I ATGCAT 1 cut(s) 472
ErhI CCWWGG 1 cut(s) 418
FauI CCCGC 1 cut(s) 1384
FauNDI CATATG 1 cut(s) 261
FbaI TGATCA 2 cut(s) 870, 963
Fnu4HI GCNGC 2 cut(s) 72, 1029
FokI GGATG 7 cut(s) 847, 1058, 1210, 1243, 1336, 1485, 1721
Fsp4HI GCNGC 2 cut(s) 72, 1029
FspBI CTAG 3 cut(s) 1062, 1508, 1610
FspI TGCGCA 1 cut(s) 513
GlaI GCGC 3 cut(s) 26, 183, 513
GluI GCNGC 2 cut(s) 72, 1029
HaeIII GGCC 3 cut(s) 341, 1275, 1607
HapII CCGG 4 cut(s) 75, 342, 1043, 1495
HgaI GACGC 2 cut(s) 477, 1253
HhaI GCGC 3 cut(s) 27, 184, 514
Hin6I GCGC 3 cut(s) 25, 182, 512
HinP1I GCGC 3 cut(s) 25, 182, 512
HindIII AAGCTT 2 cut(s) 914, 1631
HinfI GANTC 8 cut(s) 256, 346, 446, 713, 1006, 1298, 1438, 1818
HpaII CCGG 4 cut(s) 75, 342, 1043, 1495
HphI GGTGA 7 cut(s) 25, 76, 308, 667, 676, 707, 1751
Hpy166II GTNNAC 5 cut(s) 178, 760, 1094, 1117, 1285
Hpy188I TCNGA 7 cut(s) 61, 125, 394, 540, 834, 1699, 1809
Hpy188III TCNNGA 3 cut(s) 10, 1016, 1500
Hpy8I GTNNAC 5 cut(s) 178, 760, 1094, 1117, 1285
HpyAV CCTTC 5 cut(s) 338, 1201, 1328, 1507, 1659
HpyCH4III ACNGT 4 cut(s) 46, 522, 1289, 1658
HpyCH4V TGCA 9 cut(s) 470, 588, 884, 908, 1188, 1295, 1304, 1587, 1753
HpyF10VI GCNNNNNNNGC 4 cut(s) 190, 629, 812, 1301
HpyF3I CTNAG 5 cut(s) 996, 1328, 1577, 1614, 1806
HspAI GCGC 3 cut(s) 25, 182, 512
Ksp22I TGATCA 2 cut(s) 870, 963
Kzo9I GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
Lsp1109I GCAGC 2 cut(s) 58, 1040
LweI GCATC 6 cut(s) 640, 825, 918, 1314, 1440, 1702
MabI ACCWGGT 1 cut(s) 292
MaeI CTAG 3 cut(s) 1062, 1508, 1610
MaeIII GTNAC 7 cut(s) 166, 276, 352, 640, 655, 971, 1621
MalI GATC 7 cut(s) 225, 266, 831, 872, 965, 1485, 1647
MboI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
MboII GAAGA 5 cut(s) 144, 211, 746, 946, 1306
MflI RGATCY 2 cut(s) 1483, 1645
MhlI GDGCHC 2 cut(s) 1084, 1387
MlyI GAGTC 3 cut(s) 455, 1015, 1812
MnlI CCTC 9 cut(s) 49, 143, 157, 595, 621, 991, 1102, 1210, 1560
Mph1103I ATGCAT 1 cut(s) 472
MroXI GAANNNNTTC 3 cut(s) 303, 1338, 1437
MseI TTAA 6 cut(s) 200, 473, 479, 597, 618, 903
MslI CAYNNNNRTG 2 cut(s) 423, 1599
MspA1I CMGCKG 1 cut(s) 1031
MspI CCGG 4 cut(s) 75, 342, 1043, 1495
MspR9I CCNGG 2 cut(s) 294, 343
Mva1269I GAATGC 1 cut(s) 868
MvaI CCWGG 1 cut(s) 294
MvnI CGCG 4 cut(s) 11, 25, 182, 1321
MwoI GCNNNNNNNGC 4 cut(s) 190, 629, 812, 1301
NciI CCSGG 1 cut(s) 343
NcoI CCATGG 1 cut(s) 418
NdeI CATATG 1 cut(s) 261
NdeII GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
NlaIV GGNNCC 2 cut(s) 416, 1647
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 5 cut(s) 276, 352, 640, 655, 1621
NruI TCGCGA 1 cut(s) 11
NsbI TGCGCA 1 cut(s) 513
NsiI ATGCAT 1 cut(s) 472
NspI RCATGY 2 cut(s) 313, 428
NspV TTCGAA 1 cut(s) 1799
PceI AGGCCT 1 cut(s) 1275
PciI ACATGT 1 cut(s) 309
PctI GAATGC 1 cut(s) 868
PdmI GAANNNNTTC 3 cut(s) 303, 1338, 1437
PfeI GAWTC 5 cut(s) 256, 346, 713, 1298, 1438
PflMI CCANNNNNTGG 2 cut(s) 1231, 1352
PkrI GCNGC 2 cut(s) 73, 1030
PleI GAGTC 3 cut(s) 454, 1014, 1812
PpsI GAGTC 3 cut(s) 454, 1014, 1812
PscI ACATGT 1 cut(s) 309
PshBI ATTAAT 1 cut(s) 473
Psp6I CCWGG 1 cut(s) 292
PspEI GGTNACC 1 cut(s) 166
PspGI CCWGG 1 cut(s) 292
PspN4I GGNNCC 2 cut(s) 416, 1647
PspPI GGNCC 3 cut(s) 77, 415, 1606
PstNI CAGNNNCTG 1 cut(s) 1301
PsuI RGATCY 2 cut(s) 1483, 1645
PvuII CAGCTG 1 cut(s) 1031
RruI TCGCGA 1 cut(s) 11
RsaI GTAC 2 cut(s) 326, 1684
RsaNI GTAC 2 cut(s) 325, 1683
RseI CAYNNNNRTG 2 cut(s) 423, 1599
SaqAI TTAA 6 cut(s) 200, 473, 479, 597, 618, 903
SatI GCNGC 2 cut(s) 72, 1029
Sau3AI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
Sau96I GGNCC 3 cut(s) 77, 415, 1606
ScaI AGTACT 1 cut(s) 1684
SchI GAGTC 3 cut(s) 455, 1015, 1812
ScrFI CCNGG 2 cut(s) 294, 343
SduI GDGCHC 2 cut(s) 1084, 1387
SexAI ACCWGGT 1 cut(s) 292
SfaNI GCATC 6 cut(s) 640, 825, 918, 1314, 1440, 1702
SfuI TTCGAA 1 cut(s) 1799
SinI GGWCC 2 cut(s) 77, 415
SmiMI CAYNNNNRTG 2 cut(s) 423, 1599
SmlI CTYRAG 2 cut(s) 88, 978
SmoI CTYRAG 2 cut(s) 88, 978
SseBI AGGCCT 1 cut(s) 1275
SsiI CCGC 5 cut(s) 191, 428, 653, 1321, 1391
SspI AATATT 1 cut(s) 1418
SspMI CTAG 3 cut(s) 1062, 1508, 1610
StuI AGGCCT 1 cut(s) 1275
StyD4I CCNGG 2 cut(s) 292, 341
StyI CCWWGG 1 cut(s) 418
TaaI ACNGT 4 cut(s) 46, 522, 1289, 1658
TaqI TCGA 8 cut(s) 222, 385, 444, 1308, 1342, 1679, 1779, 1799
TatI WGTACW 1 cut(s) 1682
TfiI GAWTC 5 cut(s) 256, 346, 713, 1298, 1438
Tru1I TTAA 6 cut(s) 200, 473, 479, 597, 618, 903
Tru9I TTAA 6 cut(s) 200, 473, 479, 597, 618, 903
TscAI CASTG 2 cut(s) 1008, 1663
TseFI GTSAC 5 cut(s) 276, 352, 640, 655, 1621
TseI GCWGC 2 cut(s) 71, 1028
Tsp45I GTSAC 5 cut(s) 276, 352, 640, 655, 1621
TspDTI ATGAA 6 cut(s) 17, 1062, 1430, 1475, 1516, 1583
TspGWI ACGGA 4 cut(s) 257, 543, 1252, 1485
TspRI CASTG 2 cut(s) 1008, 1663
Van91I CCANNNNNTGG 2 cut(s) 1231, 1352
VpaK11BI GGWCC 2 cut(s) 77, 415
VspI ATTAAT 1 cut(s) 473
XapI RAATTY 4 cut(s) 559, 808, 1310, 1810
XceI RCATGY 2 cut(s) 313, 428
XcmI CCANNNNNNNNNTGG 1 cut(s) 43
XmnI GAANNNNTTC 3 cut(s) 303, 1338, 1437
XspI CTAG 3 cut(s) 1062, 1508, 1610
ZrmI AGTACT 1 cut(s) 1684
Zsp2I ATGCAT 1 cut(s) 472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.