Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g28852 |
| malus_domestica | MD00G1005500.v1.1 MD01G1194500.v1.1 |
| prunus_persica | Prupe.2G288700_v2.0.a1 |
| pyrus_communis | pycom01g20500 pycom07g24060 |
| rosa_chinensis | RchiOBHm_Chr1g0376541 |
| rosa_laevigata | RLG00000026603 |
| rosa_multiflora | Rmu_sc0001198.1_g000015 Rmu_sc0001308.1_g000012 Rmu_sc0005594.1_g000013 Rmu_sc0016049.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00282020 |
| rosa_rugosa | Rorug01G0396400 |
| rosa_samantha | Rh1AG412900 Rh1BG372200 Rh1CG386000 |
| rosa_wichuraiana | Rw1G036170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 29 |
| AcsI | RAATTY | 2 cut(s) | 246, 277 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 29 |
| AgsI | TTSAA | 3 cut(s) | 20, 317, 458 |
| AluBI | AGCT | 3 cut(s) | 56, 310, 450 |
| AluI | AGCT | 3 cut(s) | 56, 310, 450 |
| AoxI | GGCC | 1 cut(s) | 282 |
| ApoI | RAATTY | 2 cut(s) | 246, 277 |
| AseI | ATTAAT | 1 cut(s) | 462 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 15, 114 |
| AspLEI | GCGC | 1 cut(s) | 62 |
| AspS9I | GGNCC | 1 cut(s) | 322 |
| AsuII | TTCGAA | 1 cut(s) | 99 |
| AvaII | GGWCC | 1 cut(s) | 322 |
| BccI | CCATC | 3 cut(s) | 375, 380, 406 |
| BceAI | ACGGC | 1 cut(s) | 156 |
| Bme18I | GGWCC | 1 cut(s) | 322 |
| BmgT120I | GGNCC | 1 cut(s) | 322 |
| BmiI | GGNNCC | 1 cut(s) | 324 |
| Bpu14I | TTCGAA | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 1 cut(s) | 285 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 29 |
| BseDI | CCNNGG | 1 cut(s) | 285 |
| BseGI | GGATG | 2 cut(s) | 85, 391 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 29 |
| BseMII | CTCAG | 1 cut(s) | 282 |
| BseYI | CCCAGC | 1 cut(s) | 253 |
| BsgI | GTGCAG | 1 cut(s) | 449 |
| BshFI | GGCC | 1 cut(s) | 284 |
| BsiSI | CCGG | 1 cut(s) | 131 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 29 |
| BsnI | GGCC | 1 cut(s) | 284 |
| Bsp119I | TTCGAA | 1 cut(s) | 99 |
| BspANI | GGCC | 1 cut(s) | 284 |
| BspCNI | CTCAG | 1 cut(s) | 283 |
| BspHI | TCATGA | 1 cut(s) | 204 |
| BspLI | GGNNCC | 1 cut(s) | 324 |
| BspT104I | TTCGAA | 1 cut(s) | 99 |
| BssECI | CCNNGG | 1 cut(s) | 285 |
| BssT1I | CCWWGG | 1 cut(s) | 285 |
| Bst4CI | ACNGT | 1 cut(s) | 335 |
| BstBI | TTCGAA | 1 cut(s) | 99 |
| BstC8I | GCNNGC | 1 cut(s) | 58 |
| BstDEI | CTNAG | 1 cut(s) | 291 |
| BstF5I | GGATG | 2 cut(s) | 85, 391 |
| BstHHI | GCGC | 1 cut(s) | 62 |
| BsuRI | GGCC | 1 cut(s) | 284 |
| BtsCI | GGATG | 2 cut(s) | 85, 391 |
| BtsIMutI | CAGTG | 1 cut(s) | 340 |
| Cac8I | GCNNGC | 1 cut(s) | 58 |
| CciI | TCATGA | 1 cut(s) | 204 |
| CfoI | GCGC | 1 cut(s) | 62 |
| Cfr13I | GGNCC | 1 cut(s) | 322 |
| CviAII | CATG | 6 cut(s) | 29, 65, 106, 119, 205, 272 |
| CviJI | RGCY | 7 cut(s) | 56, 171, 284, 290, 310, 436, 450 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 171, 284, 290, 310, 436, 450 |
| DdeI | CTNAG | 1 cut(s) | 291 |
| Eco130I | CCWWGG | 1 cut(s) | 285 |
| Eco47I | GGWCC | 1 cut(s) | 322 |
| EcoT14I | CCWWGG | 1 cut(s) | 285 |
| ErhI | CCWWGG | 1 cut(s) | 285 |
| FaeI | CATG | 6 cut(s) | 32, 68, 109, 122, 208, 275 |
| FatI | CATG | 6 cut(s) | 28, 64, 105, 118, 204, 271 |
| FauNDI | CATATG | 1 cut(s) | 196 |
| FokI | GGATG | 2 cut(s) | 92, 398 |
| GlaI | GCGC | 1 cut(s) | 61 |
| GsaI | CCCAGC | 1 cut(s) | 257 |
| HaeIII | GGCC | 1 cut(s) | 284 |
| HapII | CCGG | 1 cut(s) | 131 |
| HhaI | GCGC | 1 cut(s) | 62 |
| Hin1II | CATG | 6 cut(s) | 32, 68, 109, 122, 208, 275 |
| Hin6I | GCGC | 1 cut(s) | 60 |
| HinP1I | GCGC | 1 cut(s) | 60 |
| HindIII | AAGCTT | 1 cut(s) | 308 |
| HinfI | GANTC | 1 cut(s) | 46 |
| HpaII | CCGG | 1 cut(s) | 131 |
| Hpy188III | TCNNGA | 2 cut(s) | 205, 227 |
| HpyAV | CCTTC | 3 cut(s) | 5, 181, 336 |
| HpyCH4III | ACNGT | 1 cut(s) | 335 |
| HpyCH4IV | ACGT | 1 cut(s) | 426 |
| HpyCH4V | TGCA | 5 cut(s) | 153, 368, 395, 430, 470 |
| HpyF3I | CTNAG | 1 cut(s) | 291 |
| HpySE526I | ACGT | 1 cut(s) | 426 |
| Hsp92II | CATG | 6 cut(s) | 32, 68, 109, 122, 208, 275 |
| HspAI | GCGC | 1 cut(s) | 60 |
| LmnI | GCTCC | 1 cut(s) | 455 |
| LpnPI | CCDG | 5 cut(s) | 54, 144, 162, 239, 240 |
| MaeII | ACGT | 1 cut(s) | 426 |
| MaeIII | GTNAC | 1 cut(s) | 422 |
| MboII | GAAGA | 1 cut(s) | 220 |
| MluCI | AATT | 4 cut(s) | 246, 277, 317, 459 |
| MnlI | CCTC | 3 cut(s) | 76, 184, 398 |
| MroXI | GAANNNNTTC | 2 cut(s) | 15, 114 |
| MseI | TTAA | 1 cut(s) | 462 |
| MslI | CAYNNNNRTG | 1 cut(s) | 379 |
| MspI | CCGG | 1 cut(s) | 131 |
| NdeI | CATATG | 1 cut(s) | 196 |
| NlaIII | CATG | 6 cut(s) | 32, 68, 109, 122, 208, 275 |
| NlaIV | GGNNCC | 1 cut(s) | 324 |
| NspV | TTCGAA | 1 cut(s) | 99 |
| PagI | TCATGA | 1 cut(s) | 204 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 423 |
| PdmI | GAANNNNTTC | 2 cut(s) | 15, 114 |
| PfeI | GAWTC | 1 cut(s) | 46 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 29 |
| PshBI | ATTAAT | 1 cut(s) | 462 |
| PspFI | CCCAGC | 1 cut(s) | 253 |
| PspN4I | GGNNCC | 1 cut(s) | 324 |
| PspPI | GGNCC | 1 cut(s) | 322 |
| RseI | CAYNNNNRTG | 1 cut(s) | 379 |
| SaqAI | TTAA | 1 cut(s) | 462 |
| Sau96I | GGNCC | 1 cut(s) | 322 |
| SetI | ASST | 6 cut(s) | 16, 58, 117, 312, 429, 452 |
| SfuI | TTCGAA | 1 cut(s) | 99 |
| SinI | GGWCC | 1 cut(s) | 322 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 379 |
| Sse9I | AATT | 4 cut(s) | 246, 277, 317, 459 |
| SspI | AATATT | 1 cut(s) | 95 |
| StyI | CCWWGG | 1 cut(s) | 285 |
| TaaI | ACNGT | 1 cut(s) | 335 |
| TaiI | ACGT | 1 cut(s) | 429 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 4 cut(s) | 246, 277, 317, 459 |
| TfiI | GAWTC | 1 cut(s) | 46 |
| Tru1I | TTAA | 1 cut(s) | 462 |
| Tru9I | TTAA | 1 cut(s) | 462 |
| TscAI | CASTG | 1 cut(s) | 340 |
| TspDTI | ATGAA | 5 cut(s) | 107, 152, 193, 221, 260 |
| TspRI | CASTG | 1 cut(s) | 340 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 29 |
| VpaK11BI | GGWCC | 1 cut(s) | 322 |
| VspI | ATTAAT | 1 cut(s) | 462 |
| XapI | RAATTY | 2 cut(s) | 246, 277 |
| XmnI | GAANNNNTTC | 2 cut(s) | 15, 114 |