MD00G1005500.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0013720
Physical Location & Seq
Forward (+)
788509 .. 790335
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1005500.v1.1.491

Sequence Viewer

Length: 1827 bp
ATGAAACTCGCGAGGCTCATTACGCGCCACTTCACCACCTCCACGGTGGTTCAAAAATCAGAGCGAGTGGCCGCCGGACCAATCACGTTGAGCTCAATCAAAGAGCTTCACGCACACCTTATCAGAACCCACCTCCACAAAGACCCATCGTCTCCCGTCTCCGAGGTTACCAGAGTTTACGCGCTATCTCCGCCGCATTTAAACAAAGCCCATTTAGTCTTCGATCAAATAGAGCGACCCTCATTTTTGGTTTGGAATCATATGATCCGTGGATTGTCACAGAGTGAGAAACCAGGTGAAGCAATTCACATGTATAATCGTATGTACCTTCAAGGATTGGCCGGGAATCATGTGACTTTTATATTCGTTTTCAAGGCTTGTGGTCGAGCTTCTGATGTTGGAAATGGGAAAAGAGTCCATGGACATGCACTCAAACTTGGGTTCGAGTCGTATCTTTTTGTATCCAATGCATTAATTTTAATGTATGCGTATTGTGGTGGTTTGGGTCTTGCGCAGAAACTGTTTGACGGAATGTGTCAGAGAGATTTGGTCTCTTGGAATTCTTTGATATGTGGATATAGTCAGTGCAATAGGTTTAAGGAGGTTTTGGGTCTGTTTGAGGCAATGCGGGCAGGGAATGTGACGGCTGATGCGGTGACGATGGTGAAAGTTATTTTGGCGTGTAATTACTTGGGTGAATGGGAGTTTGCTGATTCTGTGGTTCAGTATATTGAAGAAAATCATGTTAGGATTGATGTTTACTTGGGAAACACTATGATAGATATGTATGGACGGCGTGGTTTGGCGAATTTGGCTTGGGAAGTATTTGATCAGATGCGTGAAAGAAATATAGTTTCGTGGAATGCCATGATCACGGGATATGCAAAAGTGGGAAACTTGGTTAATGCAAGAAAGCTTTTCAATGAGATGCCGAAGAGAAATGTGGTGTCTTGGACTTCCATGATCACTTGTTACTCTCAAGCTAATCAACATACTGAGGCAGTGAGTCTTTTTCAAGAAATGATGGCAGCTGATGTGAGACCGGATGAAATAACCATTGCTAGTGTGCTTTCTGCTTGTGCCCGTGTGGGTTCACTTGATGTGGGAGAGGCTGTCCACAACTACATAAAGAAGCATGGAGTGAAAACAGATATTTATGTAGGAAATACTTTGATAGATATGTATTGCAAATGTGGGCTGGTTGAGAAGGCAATGGAGGTGTTCCAATGGATGGAAAAGAAAGACGCTGTGTCATGGACTTCGGTAATCTCAGGCCTTGCTGTGAACGGTTTTGCAGATTCTGCACTCGAATTCTTCTCACAGATGCTGAGAGAAGGTGTTCGACCAACTCATGGAACGTTTGTTGGGATTTTGTTAGCTTGCACTCATGCGGGTTTAGTAGAGAAAGGATTGGAATATTTTGAAAGCATGGAAAAGATTCATGGACTGATGCCAGAAATGAAACACTACGGATGTGTTGTGGATCTTTTGAGTCGGTCTGGAAAACTAGAGAAGGCTTATGAGTTCATACAAAATATGCCCGTTGTTCCACATGTCGTAGTATGGAGGATATTGCTGAGTGCTTGCAAGGTTCATGGAAATGTGGCCCTAGCTGAGAGTGTCACAGCCAAGCTTGTTGAACTGGATCCTTCTAACAGTGGGAATTACATTCTGTCATCGAGTACTTACGCAGGTTCGGATAGATGGGATGATGCTCTGAGAATGAGAGAATTGATGGGTGAGAGCAAGGTGCAAAAGCCATTTGGTCGTAGTGCCATCGAAATAGACGGCATATTTTCGAACTCTCAGAATTCGGGACTCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

609

Amino Acids

67.84

Weight (kDa)

7.61

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 83 - 128 5e-07 PPR repeat family
PPR_2 PF13041 182 - 224 1.7e-07 PPR repeat family
PPR PF01535 184 - 211 2.8e-06 PPR repeat
PPR_long PF17177 269 - 367 2.7e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 282 - 315 6e-09 PPR repeat family
PPR PF01535 285 - 315 2.9e-08 PPR repeat
PPR_2 PF13041 313 - 362 4.1e-11 PPR repeat family
PPR PF01535 316 - 343 5.4e-07 PPR repeat
PPR_2 PF13041 385 - 414 7.1e-07 PPR repeat family
PPR_1 PF12854 389 - 412 8.6e-07 PPR repeat
PPR_2 PF13041 415 - 461 1e-06 PPR repeat family
PPR PF01535 417 - 447 1e-06 PPR repeat
E_motif PF20431 532 - 594 9.2e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 513
Acc36I ACCTGC 1 cut(s) 1682
AccB7I CCANNNNNTGG 2 cut(s) 1231, 1352
AccII CGCG 3 cut(s) 11, 25, 182
AciI CCGC 6 cut(s) 72, 191, 194, 628, 653, 1391
AclI AACGTT 1 cut(s) 1358
AclWI GGATC 4 cut(s) 259, 1491, 1640, 1653
AcoI YGGCCR 2 cut(s) 69, 339
AcsI RAATTY 4 cut(s) 559, 808, 1310, 1810
AdeI CACNNNGTG 1 cut(s) 284
AfaI GTAC 2 cut(s) 326, 1684
AfiI CCNNNNNNNGG 2 cut(s) 1231, 1352
AflIII ACRYGT 2 cut(s) 309, 1552
AgsI TTSAA 8 cut(s) 53, 332, 373, 734, 922, 1016, 1424, 1640
AhdI GACNNNNNGTC 2 cut(s) 148, 1249
AjnI CCWGG 1 cut(s) 292
AjuI GAANNNNNNNTTGG 2 cut(s) 659, 691
AluBI AGCT 9 cut(s) 93, 106, 389, 916, 983, 1031, 1379, 1613, 1633
AluI AGCT 9 cut(s) 93, 106, 389, 916, 983, 1031, 1379, 1613, 1633
Alw21I GWGCWC 1 cut(s) 95
Alw26I GTCTC 4 cut(s) 156, 163, 556, 1033
AlwI GGATC 4 cut(s) 259, 1491, 1640, 1653
AlwNI CAGNNNCTG 3 cut(s) 520, 1301, 1327
AoxI GGCC 4 cut(s) 69, 339, 1273, 1605
ApeKI GCWGC 1 cut(s) 1028
ApoI RAATTY 4 cut(s) 559, 808, 1310, 1810
AseI ATTAAT 1 cut(s) 473
Asp700I GAANNNNTTC 3 cut(s) 303, 1338, 1437
AspLEI GCGC 3 cut(s) 27, 184, 514
AspS9I GGNCC 2 cut(s) 77, 1606
AsuC2I CCSGG 1 cut(s) 343
AsuHPI GGTGA 6 cut(s) 25, 308, 667, 676, 707, 1751
AsuII TTCGAA 1 cut(s) 1799
AvaII GGWCC 1 cut(s) 77
BaeGI GKGCMC 1 cut(s) 1084
BamHI GGATCC 1 cut(s) 1645
BanII GRGCYC 1 cut(s) 95
BbsI GAAGAC 1 cut(s) 211
Bbv12I GWGCWC 1 cut(s) 95
BbvI GCAGC 1 cut(s) 1040
BccI CCATC 7 cut(s) 154, 655, 1018, 1225, 1698, 1729, 1784
BceAI ACGGC 3 cut(s) 660, 809, 1804
BciT130I CCWGG 1 cut(s) 294
BciVI GTATCC 1 cut(s) 472
BclI TGATCA 3 cut(s) 829, 870, 963
BcnI CCSGG 1 cut(s) 343
BcoDI GTCTC 4 cut(s) 156, 163, 556, 1033
BfaI CTAG 3 cut(s) 1062, 1508, 1610
BfuAI ACCTGC 1 cut(s) 1682
BfuI GTATCC 1 cut(s) 472
BisI GCNGC 3 cut(s) 72, 194, 1029
BlsI GCNGC 3 cut(s) 73, 195, 1030
BmcAI AGTACT 1 cut(s) 1684
Bme1390I CCNGG 2 cut(s) 294, 343
Bme18I GGWCC 1 cut(s) 77
BmeRI GACNNNNNGTC 2 cut(s) 148, 1249
BmgT120I GGNCC 2 cut(s) 77, 1606
BmiI GGNNCC 1 cut(s) 1647
BmrFI CCNGG 2 cut(s) 294, 343
BmsI GCATC 6 cut(s) 640, 825, 918, 1314, 1440, 1702
BpiI GAAGAC 1 cut(s) 211
BplI GAGNNNNNCTC 2 cut(s) 224, 256
Bpu14I TTCGAA 1 cut(s) 1799
BpuEI CTTGAG 1 cut(s) 963
BpuMI CCSGG 1 cut(s) 343
BsaI GGTCTC 2 cut(s) 556, 1033
BsaJI CCNNGG 4 cut(s) 42, 162, 268, 418
BsaWI WCCGGW 1 cut(s) 1042
BsaXI ACNNNNNCTCC 2 cut(s) 1098, 1128
Bsc4I CCNNNNNNNGG 2 cut(s) 1231, 1352
Bse1I ACTGG 1 cut(s) 1647
Bse3DI GCAATG 3 cut(s) 630, 1056, 1218
BseBI CCWGG 1 cut(s) 294
BseDI CCNNGG 4 cut(s) 42, 162, 268, 418
BseGI GGATG 4 cut(s) 1051, 1236, 1478, 1714
BseLI CCNNNNNNNGG 2 cut(s) 1231, 1352
BseMI GCAATG 3 cut(s) 630, 1056, 1218
BseMII CTCAG 7 cut(s) 987, 1284, 1319, 1568, 1605, 1709, 1820
BseNI ACTGG 1 cut(s) 1647
BseSI GKGCMC 1 cut(s) 1084
BseXI GCAGC 1 cut(s) 1040
BsgI GTGCAG 1 cut(s) 1287
Bsh1236I CGCG 3 cut(s) 11, 25, 182
BshFI GGCC 4 cut(s) 71, 341, 1275, 1607
BsiHKAI GWGCWC 1 cut(s) 95
BsiSI CCGG 3 cut(s) 75, 342, 1043
BslI CCNNNNNNNGG 2 cut(s) 1231, 1352
BsmAI GTCTC 4 cut(s) 156, 163, 556, 1033
BsmBI CGTCTC 2 cut(s) 156, 163
BsmI GAATGC 1 cut(s) 868
BsnI GGCC 4 cut(s) 71, 341, 1275, 1607
Bso31I GGTCTC 2 cut(s) 556, 1033
Bsp119I TTCGAA 1 cut(s) 1799
Bsp1286I GDGCHC 2 cut(s) 95, 1084
Bsp143I GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
Bsp19I CCATGG 1 cut(s) 418
Bsp68I TCGCGA 1 cut(s) 11
BspACI CCGC 6 cut(s) 72, 191, 194, 628, 653, 1391
BspANI GGCC 4 cut(s) 71, 341, 1275, 1607
BspCNI CTCAG 7 cut(s) 988, 1283, 1320, 1569, 1606, 1710, 1819
BspFNI CGCG 3 cut(s) 11, 25, 182
BspLI GGNNCC 1 cut(s) 1647
BspMI ACCTGC 1 cut(s) 1682
BspPI GGATC 4 cut(s) 259, 1491, 1640, 1653
BspT104I TTCGAA 1 cut(s) 1799
BspTNI GGTCTC 2 cut(s) 556, 1033
BsrDI GCAATG 3 cut(s) 630, 1056, 1218
BsrI ACTGG 1 cut(s) 1647
BssECI CCNNGG 4 cut(s) 42, 162, 268, 418
BssMI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
BssT1I CCWWGG 1 cut(s) 418
Bst2UI CCWGG 1 cut(s) 294
Bst4CI ACNGT 4 cut(s) 46, 522, 1289, 1658
Bst6I CTCTTC 1 cut(s) 929
BstAPI GCANNNNNTGC 1 cut(s) 1301
BstBI TTCGAA 1 cut(s) 1799
BstC8I GCNNGC 3 cut(s) 630, 1381, 1585
BstDEI CTNAG 7 cut(s) 996, 1270, 1328, 1577, 1614, 1718, 1806
BstDSI CCRYGG 3 cut(s) 42, 268, 418
BstEII GGTNACC 1 cut(s) 166
BstF5I GGATG 4 cut(s) 1051, 1236, 1478, 1714
BstFNI CGCG 3 cut(s) 11, 25, 182
BstHHI GCGC 3 cut(s) 27, 184, 514
BstKTI GATC 7 cut(s) 226, 267, 832, 873, 966, 1486, 1648
BstMAI GTCTC 4 cut(s) 156, 163, 556, 1033
BstMBI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
BstMWI GCNNNNNNNGC 5 cut(s) 22, 190, 629, 812, 1301
BstNI CCWGG 1 cut(s) 294
BstNSI RCATGY 3 cut(s) 313, 428, 1556
BstPI GGTNACC 1 cut(s) 166
BstSCI CCNGG 2 cut(s) 292, 341
BstSLI GKGCMC 1 cut(s) 1084
BstUI CGCG 3 cut(s) 11, 25, 182
BstV1I GCAGC 1 cut(s) 1040
BstV2I GAAGAC 1 cut(s) 211
BstX2I RGATCY 2 cut(s) 1483, 1645
BstYI RGATCY 2 cut(s) 1483, 1645
BsuI GTATCC 1 cut(s) 472
BsuRI GGCC 4 cut(s) 71, 341, 1275, 1607
BtgI CCRYGG 3 cut(s) 42, 268, 418
BtsCI GGATG 4 cut(s) 1051, 1236, 1478, 1714
BtsI GCAGTG 1 cut(s) 1008
BtsIMutI CAGTG 3 cut(s) 590, 1008, 1663
BtuMI TCGCGA 1 cut(s) 11
BveI ACCTGC 1 cut(s) 1682
Cac8I GCNNGC 3 cut(s) 630, 1381, 1585
CaiI CAGNNNCTG 3 cut(s) 520, 1301, 1327
CfoI GCGC 3 cut(s) 27, 184, 514
Cfr13I GGNCC 2 cut(s) 77, 1606
CseI GACGC 1 cut(s) 1253
CsiI ACCWGGT 1 cut(s) 292
Csp6I GTAC 2 cut(s) 325, 1683
CspCI CAANNNNNGTGG 2 cut(s) 361, 396
CviQI GTAC 2 cut(s) 325, 1683
DdeI CTNAG 7 cut(s) 996, 1270, 1328, 1577, 1614, 1718, 1806
DpnI GATC 7 cut(s) 225, 266, 831, 872, 965, 1485, 1647
DpnII GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
DraI TTTAAA 1 cut(s) 201
DraIII CACNNNGTG 1 cut(s) 284
DriI GACNNNNNGTC 2 cut(s) 148, 1249
EaeI YGGCCR 2 cut(s) 69, 339
Eam1104I CTCTTC 1 cut(s) 929
Eam1105I GACNNNNNGTC 2 cut(s) 148, 1249
EarI CTCTTC 1 cut(s) 929
EciI GGCGGA 1 cut(s) 180
Ecl136II GAGCTC 1 cut(s) 93
Eco130I CCWWGG 1 cut(s) 418
Eco147I AGGCCT 1 cut(s) 1275
Eco24I GRGCYC 1 cut(s) 95
Eco31I GGTCTC 2 cut(s) 556, 1033
Eco47I GGWCC 1 cut(s) 77
Eco53kI GAGCTC 1 cut(s) 93
Eco91I GGTNACC 1 cut(s) 166
EcoICRI GAGCTC 1 cut(s) 93
EcoO65I GGTNACC 1 cut(s) 166
EcoRI GAATTC 3 cut(s) 559, 1310, 1810
EcoRII CCWGG 1 cut(s) 292
EcoT14I CCWWGG 1 cut(s) 418
EcoT22I ATGCAT 1 cut(s) 472
EcoT38I GRGCYC 1 cut(s) 95
ErhI CCWWGG 1 cut(s) 418
Esp3I CGTCTC 2 cut(s) 156, 163
FauI CCCGC 2 cut(s) 621, 1384
FauNDI CATATG 1 cut(s) 261
FbaI TGATCA 3 cut(s) 829, 870, 963
Fnu4HI GCNGC 3 cut(s) 72, 194, 1029
FokI GGATG 4 cut(s) 1058, 1243, 1485, 1721
FriOI GRGCYC 1 cut(s) 95
Fsp4HI GCNGC 3 cut(s) 72, 194, 1029
FspBI CTAG 3 cut(s) 1062, 1508, 1610
FspI TGCGCA 1 cut(s) 513
GlaI GCGC 3 cut(s) 26, 183, 513
GluI GCNGC 3 cut(s) 72, 194, 1029
HaeIII GGCC 4 cut(s) 71, 341, 1275, 1607
HapII CCGG 3 cut(s) 75, 342, 1043
HgaI GACGC 1 cut(s) 1253
HhaI GCGC 3 cut(s) 27, 184, 514
Hin6I GCGC 3 cut(s) 25, 182, 512
HinP1I GCGC 3 cut(s) 25, 182, 512
HindIII AAGCTT 2 cut(s) 914, 1631
HpaII CCGG 3 cut(s) 75, 342, 1043
HphI GGTGA 6 cut(s) 25, 308, 667, 676, 707, 1751
Hpy166II GTNNAC 5 cut(s) 178, 760, 1094, 1117, 1285
Hpy188I TCNGA 9 cut(s) 61, 125, 163, 394, 540, 834, 1699, 1719, 1809
Hpy188III TCNNGA 4 cut(s) 10, 1016, 1500, 1815
Hpy8I GTNNAC 5 cut(s) 178, 760, 1094, 1117, 1285
HpyAV CCTTC 5 cut(s) 338, 1201, 1328, 1507, 1659
HpyCH4III ACNGT 4 cut(s) 46, 522, 1289, 1658
HpyCH4IV ACGT 2 cut(s) 86, 1358
HpyF10VI GCNNNNNNNGC 5 cut(s) 22, 190, 629, 812, 1301
HpyF3I CTNAG 7 cut(s) 996, 1270, 1328, 1577, 1614, 1718, 1806
HpySE526I ACGT 2 cut(s) 86, 1358
HspAI GCGC 3 cut(s) 25, 182, 512
Ksp22I TGATCA 3 cut(s) 829, 870, 963
Kzo9I GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
Lsp1109I GCAGC 1 cut(s) 1040
LweI GCATC 6 cut(s) 640, 825, 918, 1314, 1440, 1702
MabI ACCWGGT 1 cut(s) 292
MaeI CTAG 3 cut(s) 1062, 1508, 1610
MaeII ACGT 2 cut(s) 86, 1358
MaeIII GTNAC 7 cut(s) 166, 276, 352, 640, 655, 971, 1621
MalI GATC 7 cut(s) 225, 266, 831, 872, 965, 1485, 1647
MboI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
MboII GAAGA 4 cut(s) 211, 746, 946, 1306
MflI RGATCY 2 cut(s) 1483, 1645
MhlI GDGCHC 2 cut(s) 95, 1084
MluCI AATT 9 cut(s) 303, 474, 559, 685, 808, 1310, 1663, 1730, 1810
MlyI GAGTC 5 cut(s) 423, 455, 1015, 1501, 1812
MmeI TCCRAC 1 cut(s) 379
Mph1103I ATGCAT 1 cut(s) 472
MroXI GAANNNNTTC 3 cut(s) 303, 1338, 1437
MseI TTAA 5 cut(s) 200, 473, 479, 597, 903
MslI CAYNNNNRTG 2 cut(s) 423, 1599
MspA1I CMGCKG 1 cut(s) 1031
MspI CCGG 3 cut(s) 75, 342, 1043
MspR9I CCNGG 2 cut(s) 294, 343
Mva1269I GAATGC 1 cut(s) 868
MvaI CCWGG 1 cut(s) 294
MvnI CGCG 3 cut(s) 11, 25, 182
MwoI GCNNNNNNNGC 5 cut(s) 22, 190, 629, 812, 1301
NciI CCSGG 1 cut(s) 343
NcoI CCATGG 1 cut(s) 418
NdeI CATATG 1 cut(s) 261
NdeII GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
NlaIV GGNNCC 1 cut(s) 1647
NmuCI GTSAC 5 cut(s) 276, 352, 640, 655, 1621
NruI TCGCGA 1 cut(s) 11
NsbI TGCGCA 1 cut(s) 513
NsiI ATGCAT 1 cut(s) 472
NspI RCATGY 3 cut(s) 313, 428, 1556
NspV TTCGAA 1 cut(s) 1799
PceI AGGCCT 1 cut(s) 1275
PciI ACATGT 2 cut(s) 309, 1552
PctI GAATGC 1 cut(s) 868
PdmI GAANNNNTTC 3 cut(s) 303, 1338, 1437
PfeI GAWTC 5 cut(s) 256, 346, 713, 1298, 1438
PflMI CCANNNNNTGG 2 cut(s) 1231, 1352
PkrI GCNGC 3 cut(s) 73, 195, 1030
PleI GAGTC 5 cut(s) 422, 454, 1014, 1500, 1812
PpsI GAGTC 5 cut(s) 422, 454, 1014, 1500, 1812
PscI ACATGT 2 cut(s) 309, 1552
PshBI ATTAAT 1 cut(s) 473
Psp124BI GAGCTC 1 cut(s) 95
Psp1406I AACGTT 1 cut(s) 1358
Psp6I CCWGG 1 cut(s) 292
PspEI GGTNACC 1 cut(s) 166
PspGI CCWGG 1 cut(s) 292
PspN4I GGNNCC 1 cut(s) 1647
PspPI GGNCC 2 cut(s) 77, 1606
PstNI CAGNNNCTG 3 cut(s) 520, 1301, 1327
PsuI RGATCY 2 cut(s) 1483, 1645
PvuII CAGCTG 1 cut(s) 1031
RruI TCGCGA 1 cut(s) 11
RsaI GTAC 2 cut(s) 326, 1684
RsaNI GTAC 2 cut(s) 325, 1683
RseI CAYNNNNRTG 2 cut(s) 423, 1599
SacI GAGCTC 1 cut(s) 95
SaqAI TTAA 5 cut(s) 200, 473, 479, 597, 903
SatI GCNGC 3 cut(s) 72, 194, 1029
Sau3AI GATC 7 cut(s) 223, 264, 829, 870, 963, 1483, 1645
Sau96I GGNCC 2 cut(s) 77, 1606
ScaI AGTACT 1 cut(s) 1684
SchI GAGTC 5 cut(s) 423, 455, 1015, 1501, 1812
ScrFI CCNGG 2 cut(s) 294, 343
SduI GDGCHC 2 cut(s) 95, 1084
SexAI ACCWGGT 1 cut(s) 292
SfaNI GCATC 6 cut(s) 640, 825, 918, 1314, 1440, 1702
SfuI TTCGAA 1 cut(s) 1799
SinI GGWCC 1 cut(s) 77
SmiMI CAYNNNNRTG 2 cut(s) 423, 1599
SmlI CTYRAG 1 cut(s) 978
SmoI CTYRAG 1 cut(s) 978
Sse9I AATT 9 cut(s) 303, 474, 559, 685, 808, 1310, 1663, 1730, 1810
SseBI AGGCCT 1 cut(s) 1275
SsiI CCGC 6 cut(s) 72, 191, 194, 628, 653, 1391
SspI AATATT 1 cut(s) 1418
SspMI CTAG 3 cut(s) 1062, 1508, 1610
SstI GAGCTC 1 cut(s) 95
StuI AGGCCT 1 cut(s) 1275
StyD4I CCNGG 2 cut(s) 292, 341
StyI CCWWGG 1 cut(s) 418
TaaI ACNGT 4 cut(s) 46, 522, 1289, 1658
TaiI ACGT 2 cut(s) 89, 1361
TaqI TCGA 8 cut(s) 222, 385, 444, 1308, 1342, 1679, 1779, 1799
TaqII GACCGA 1 cut(s) 1485
TasI AATT 9 cut(s) 303, 474, 559, 685, 808, 1310, 1663, 1730, 1810
TatI WGTACW 1 cut(s) 1682
TauI GCSGC 2 cut(s) 74, 196
TfiI GAWTC 5 cut(s) 256, 346, 713, 1298, 1438
Tru1I TTAA 5 cut(s) 200, 473, 479, 597, 903
Tru9I TTAA 5 cut(s) 200, 473, 479, 597, 903
TscAI CASTG 3 cut(s) 590, 1008, 1663
TseFI GTSAC 5 cut(s) 276, 352, 640, 655, 1621
TseI GCWGC 1 cut(s) 1028
Tsp45I GTSAC 5 cut(s) 276, 352, 640, 655, 1621
TspDTI ATGAA 6 cut(s) 17, 1062, 1430, 1475, 1516, 1583
TspGWI ACGGA 3 cut(s) 257, 543, 1485
TspRI CASTG 3 cut(s) 590, 1008, 1663
Van91I CCANNNNNTGG 2 cut(s) 1231, 1352
VpaK11BI GGWCC 1 cut(s) 77
VspI ATTAAT 1 cut(s) 473
XapI RAATTY 4 cut(s) 559, 808, 1310, 1810
XceI RCATGY 3 cut(s) 313, 428, 1556
XcmI CCANNNNNNNNNTGG 1 cut(s) 43
XmnI GAANNNNTTC 3 cut(s) 303, 1338, 1437
XspI CTAG 3 cut(s) 1062, 1508, 1610
ZrmI AGTACT 1 cut(s) 1684
Zsp2I ATGCAT 1 cut(s) 472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.