Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0014091

Physical Location & Seq

Genomic Coordinates Forward (+)

21631507 .. 21633000

Gene Structure 1494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g29370.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1257 bp

ATGCAAGGGTACGGGAGCCTTTGGTTGGTACACAAACAACCCCTATGTCTCTTGACATCTCCACCACCACCACCACTGCCCCTTAACCATGTCTGGGCGATGAACCCACCTTTCCATCTCCCAATCCCTCCTCCGTTACAAACCCAAAACCCAAACCCACAACGACGACGACATAATCAACCTACAGATCATCATCGTCTTACTAGGTCCGAATGGGACTTCACTCTCTCCACCGTCGTCTCATCCTCCACGGCCACCGGCGCCGTCTCCAACACTCTCGGAGTCATCGAGTTCGACCCATCGGAGACGCTTCTAGCCACCGGAGGCATAGCCAGGAAGATAAGAATCTACAGCGTCAGCTCTCTTATCCCGAATAATAATAACTACGACGACGTCGTTTCGCTAGACCACGCAGCTGCATGCGACTATTACATATGCACTCCCGCCAAGCTCAGCAGCCTCCGCTGGCGTCCCGGGTCGGGCGGCCGGGTCCTCGGGTCGGGGGACTACGACGGCGTCGTCACGGAGTACGACCTCGAGTCCCGCCTTCCGGTATTCGAGCGCGACGAGCACGGCGGGCGCCGCGTATGGAGCCTAGACTATAATTCGGATCCGGGTTGTCTCGGGGCGTCCGGATCCGACGACGGGACCCTCCAAATGTGGGACCCGCGGTGCGAGGCTGGGGAGTGTGTGGCTAGAGTGGTTCCGTCGGAAGCGGGTAACCCGGTCTGTTGCGTGGAGTTCAACCCCTTCGGTGGCCCCCTCCTGGCCGTCGGATGTGCTGACCGGAAAGCCTACGTCTACGATGCGAGGAGAATGTCGGGCCCCGTTTTGAGCTTCGACGGCCACGATAAGACCGTGACGTATGTGAGGTTCCTCGACAGCCGTAGGATGGTGTCTTCCGGGACAGACGGGTGTCTGAAGATGTGGAGCGTGGAAGACGCGCGGGAAATTCGGACGTATTCGGGTCATGCCAACAACCGGAGCTTCGTCGGGTTGTCCGTCTGGAGAAGCGGTGGGCTTCTCGGGTGCGGGTCCGAGAATAATCAGGTGTATGTGTATGATGTGAGGTGGGGTGAGCCGGTTTGGGTGCATGGGTTTGGACCAATGGGAAGCGAGGGTTGTGATGACCGATGGTTCGTGAGCAGTGTGTGCTGGCGGCAGAAGGACGGTGAGGACCAGTGTACCCTCGTGGCGGGTGGATCCGATGGAGTTTTACAGGTTTTTGTGGGTAGAAGAAAGTCGTTAGCTTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009639 GO:0009640 GO:0009641 GO:0009642 GO:0009646 GO:0009647 GO:0009648 GO:0009649 GO:0009657 GO:0009658 GO:0009791 GO:0009812 GO:0009987 GO:0010114 GO:0010119 GO:0010218 GO:0010224 GO:0010228 GO:0016043 GO:0016567 GO:0016604 GO:0016740 GO:0019538 GO:0019787 GO:0022414 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0036211 GO:0042440 GO:0042752 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043393 GO:0043412 GO:0043496 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046283 GO:0046483 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051098 GO:0051716 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0065009 GO:0070013 GO:0070647 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:0140096 GO:1901360 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04115 ko04120 ko04712 map04115 map04120 map04712

Pfam Domains

Protein Families

WD40

Protein Analysis

419

Amino Acids

45.92

Weight (kDa)

5.89

Isoelectric Point (pI)

57.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	92 - 357	9.9e-23	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	149 - 287	1.2e-10	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	151 - 356	4.6e-15	THOC3 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	163 - 329	3.1e-12	TEP-1 second beta-propeller
Beta-prop_EML_2	PF23414	170 - 320	3.2e-09	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	196 - 358	2e-07	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	241 - 330	9.4e-08	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	242 - 361	3.6e-11	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	243 - 356	9.4e-13	WDR3 first beta-propeller domain
Beta-prop_DCAF4	PF23761	254 - 343	2.9e-06	DDB1- and CUL4-associated factor 4 beta-propeller domain
WD40_CDC20-Fz	PF24807	284 - 409	1.8e-07	CDC20/Fizzy WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0014091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23730
fragaria_vesca	FvH4_7g29370
malus_domestica	MD01G1199700.v1.1 MD07G1267700.v1.1
prunus_persica	Prupe.2G293400_v2.0.a1
pyrus_communis	pycom01g20980 pycom07g24530
rosa_chinensis	RchiOBHm_Chr1g0377161
rosa_laevigata	RLG00000026540
rosa_multiflora	Rmu_ssc0000155.1_g000016
rosa_roxburghii	Rroxscaffold_4G00281420
rosa_rugosa	Rorug01G0401700
rosa_samantha	Rh1AG419100 Rh1BG378200 Rh1CG392200 Rh1DG408900
rosa_wichuraiana	Rw1G036760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	518
AatII	GACGTC	1 cut(s)	396
AccB1I	GGYRCC	2 cut(s)	260, 579
AccI	GTMKAC	1 cut(s)	801
AccII	CGCG	5 cut(s)	564, 585, 670, 944, 946
AccIII	TCCGGA	1 cut(s)	632
AclWI	GGATC	6 cut(s)	605, 618, 630, 643, 1197, 1210
AcoI	YGGCCR	4 cut(s)	252, 484, 768, 844
AcsI	RAATTY	1 cut(s)	951
AcuI	CTGAAG	1 cut(s)	941
AcyI	GRCGYC	6 cut(s)	261, 393, 469, 516, 580, 629
AfaI	GTAC	4 cut(s)	11, 30, 530, 1186
AgsI	TTSAA	1 cut(s)	745
AhdI	GACNNNNNGTC	1 cut(s)	538
AjnI	CCWGG	2 cut(s)	332, 765
AluBI	AGCT	6 cut(s)	360, 416, 451, 837, 987, 1250
AluI	AGCT	6 cut(s)	360, 416, 451, 837, 987, 1250
Alw21I	GWGCWC	1 cut(s)	573
Alw26I	GTCTC	5 cut(s)	53, 244, 271, 299, 626
AlwI	GGATC	6 cut(s)	605, 618, 630, 643, 1197, 1210
Ama87I	CYCGRG	5 cut(s)	473, 494, 536, 623, 1025
Aor13HI	TCCGGA	1 cut(s)	632
AoxI	GGCC	6 cut(s)	252, 484, 757, 768, 823, 844
ApaI	GGGCCC	1 cut(s)	827
ApeKI	GCWGC	3 cut(s)	413, 416, 456
ApoI	RAATTY	1 cut(s)	951
ArsI	GACNNNNNNTTYG	2 cut(s)	1121, 1153
AspLEI	GCGC	4 cut(s)	263, 564, 582, 946
AsuC2I	CCSGG	6 cut(s)	474, 475, 488, 615, 725, 904
AsuHPI	GGTGA	2 cut(s)	1088, 1184
AvaI	CYCGRG	5 cut(s)	473, 494, 536, 623, 1025
AvaII	GGWCC	7 cut(s)	207, 490, 648, 664, 1035, 1103, 1177
BaeGI	GKGCMC	1 cut(s)	827
BaeI	ACNNNNGTAYC	2 cut(s)	1168, 1201
BamHI	GGATCC	3 cut(s)	610, 635, 1202
BanI	GGYRCC	2 cut(s)	260, 579
BanII	GRGCYC	1 cut(s)	827
BauI	CACGAG	1 cut(s)	1190
BbsI	GAAGAC	2 cut(s)	891, 945
Bbv12I	GWGCWC	1 cut(s)	573
BbvI	GCAGC	3 cut(s)	403, 425, 468
BccI	CCATC	5 cut(s)	123, 307, 886, 1128, 1202
BceAI	ACGGC	7 cut(s)	248, 267, 529, 589, 755, 859, 870
BciT130I	CCWGG	2 cut(s)	334, 767
BcnI	CCSGG	6 cut(s)	474, 475, 488, 615, 725, 904
BcoDI	GTCTC	5 cut(s)	53, 244, 271, 299, 626
BfaI	CTAG	5 cut(s)	204, 314, 404, 596, 696
BfmI	CTRYAG	2 cut(s)	183, 349
BfoI	RGCGCY	2 cut(s)	264, 583
BisI	GCNGC	6 cut(s)	414, 417, 457, 484, 583, 1160
BlpI	GCTNAGC	1 cut(s)	452
BlsI	GCNGC	6 cut(s)	415, 418, 458, 485, 584, 1161
Bme1390I	CCNGG	8 cut(s)	334, 474, 475, 488, 615, 725, 767, 904
Bme18I	GGWCC	7 cut(s)	207, 490, 648, 664, 1035, 1103, 1177
BmeRI	GACNNNNNGTC	1 cut(s)	538
BmeT110I	CYCGRG	5 cut(s)	473, 494, 536, 623, 1025
BmrFI	CCNGG	8 cut(s)	334, 474, 475, 488, 615, 725, 767, 904
BmsI	GCATC	1 cut(s)	796
BoxI	GACNNNNGTC	1 cut(s)	915
BpiI	GAAGAC	2 cut(s)	891, 945
BpmI	CTGGAG	1 cut(s)	1027
Bpu1102I	GCTNAGC	1 cut(s)	452
BpuMI	CCSGG	6 cut(s)	474, 475, 488, 615, 725, 904
BsaBI	GATNNNNATC	2 cut(s)	192, 344
BsaHI	GRCGYC	6 cut(s)	261, 393, 469, 516, 580, 629
BsaJI	CCNNGG	4 cut(s)	249, 473, 493, 668
BsaWI	WCCGGW	5 cut(s)	320, 550, 632, 786, 981
BsaXI	ACNNNNNCTCC	2 cut(s)	1000, 1030
Bse118I	RCCGGY	2 cut(s)	257, 1081
Bse1I	ACTGG	1 cut(s)	1180
Bse8I	GATNNNNATC	2 cut(s)	192, 344
BseAI	TCCGGA	1 cut(s)	632
BseBI	CCWGG	2 cut(s)	334, 767
BseDI	CCNNGG	4 cut(s)	249, 473, 493, 668
BseGI	GGATG	3 cut(s)	242, 782, 897
BseJI	GATNNNNATC	2 cut(s)	192, 344
BseMII	CTCAG	1 cut(s)	466
BseNI	ACTGG	1 cut(s)	1180
BseRI	GAGGAG	2 cut(s)	120, 826
BseSI	GKGCMC	1 cut(s)	827
BseX3I	CGGCCG	1 cut(s)	484
BseXI	GCAGC	3 cut(s)	403, 425, 468
BseYI	CCCAGC	1 cut(s)	680
Bsh1236I	CGCG	5 cut(s)	564, 585, 670, 944, 946
Bsh1285I	CGRYCG	1 cut(s)	487
BshFI	GGCC	6 cut(s)	254, 486, 759, 770, 825, 846
BshNI	GGYRCC	2 cut(s)	260, 579
BsiEI	CGRYCG	1 cut(s)	487
BsiHKAI	GWGCWC	1 cut(s)	573
BsiHKCI	CYCGRG	5 cut(s)	473, 494, 536, 623, 1025
BslFI	GGGAC	7 cut(s)	230, 456, 518, 526, 661, 677, 919
BsmAI	GTCTC	5 cut(s)	53, 244, 271, 299, 626
BsmBI	CGTCTC	3 cut(s)	244, 271, 299
BsmFI	GGGAC	7 cut(s)	230, 456, 518, 526, 661, 677, 919
BsnI	GGCC	6 cut(s)	254, 486, 759, 770, 825, 846
BsoBI	CYCGRG	5 cut(s)	473, 494, 536, 623, 1025
Bsp120I	GGGCCC	1 cut(s)	823
Bsp1286I	GDGCHC	2 cut(s)	573, 827
Bsp13I	TCCGGA	1 cut(s)	632
Bsp143I	GATC	4 cut(s)	187, 610, 635, 1202
Bsp1720I	GCTNAGC	1 cut(s)	452
BspANI	GGCC	6 cut(s)	254, 486, 759, 770, 825, 846
BspCNI	CTCAG	1 cut(s)	465
BspEI	TCCGGA	1 cut(s)	632
BspFNI	CGCG	5 cut(s)	564, 585, 670, 944, 946
BspPI	GGATC	6 cut(s)	605, 618, 630, 643, 1197, 1210
BspT107I	GGYRCC	2 cut(s)	260, 579
BsrFI	RCCGGY	2 cut(s)	257, 1081
BsrI	ACTGG	1 cut(s)	1180
BssAI	RCCGGY	2 cut(s)	257, 1081
BssECI	CCNNGG	4 cut(s)	249, 473, 493, 668
BssMI	GATC	4 cut(s)	187, 610, 635, 1202
BssNI	GRCGYC	6 cut(s)	261, 393, 469, 516, 580, 629
BssSI	CACGAG	1 cut(s)	1190
Bst2BI	CACGAG	1 cut(s)	1190
Bst2UI	CCWGG	2 cut(s)	334, 767
Bst4CI	ACNGT	3 cut(s)	235, 859, 1172
BstACI	GRCGYC	6 cut(s)	261, 393, 469, 516, 580, 629
BstAPI	GCANNNNNTGC	1 cut(s)	1152
BstC8I	GCNNGC	4 cut(s)	421, 467, 578, 1157
BstDEI	CTNAG	1 cut(s)	452
BstDSI	CCRYGG	2 cut(s)	249, 668
BstEII	GGTNACC	1 cut(s)	719
BstF5I	GGATG	3 cut(s)	242, 782, 897
BstFNI	CGCG	5 cut(s)	564, 585, 670, 944, 946
BstH2I	RGCGCY	2 cut(s)	264, 583
BstHHI	GCGC	4 cut(s)	263, 564, 582, 946
BstKTI	GATC	4 cut(s)	190, 613, 638, 1205
BstMAI	GTCTC	5 cut(s)	53, 244, 271, 299, 626
BstMBI	GATC	4 cut(s)	187, 610, 635, 1202
BstMCI	CGRYCG	1 cut(s)	487
BstMWI	GCNNNNNNNGC	8 cut(s)	260, 462, 568, 577, 582, 591, 843, 1152
BstNI	CCWGG	2 cut(s)	334, 767
BstNSI	RCATGY	1 cut(s)	423
BstPAI	GACNNNNGTC	1 cut(s)	915
BstPI	GGTNACC	1 cut(s)	719
BstSCI	CCNGG	8 cut(s)	332, 472, 473, 486, 613, 723, 765, 902
BstSFI	CTRYAG	2 cut(s)	183, 349
BstSLI	GKGCMC	1 cut(s)	827
BstUI	CGCG	5 cut(s)	564, 585, 670, 944, 946
BstV1I	GCAGC	3 cut(s)	403, 425, 468
BstV2I	GAAGAC	2 cut(s)	891, 945
BstX2I	RGATCY	3 cut(s)	610, 635, 1202
BstYI	RGATCY	3 cut(s)	610, 635, 1202
BstZI	CGGCCG	1 cut(s)	484
BsuRI	GGCC	6 cut(s)	254, 486, 759, 770, 825, 846
BtgI	CCRYGG	2 cut(s)	249, 668
BtgZI	GCGATG	1 cut(s)	113
BtsCI	GGATG	3 cut(s)	242, 782, 897
BtsI	GCAGTG	2 cut(s)	74, 1153
BtsIMutI	CAGTG	3 cut(s)	74, 1153, 1187
Cac8I	GCNNGC	4 cut(s)	421, 467, 578, 1157
CfoI	GCGC	4 cut(s)	263, 564, 582, 946
Cfr10I	RCCGGY	2 cut(s)	257, 1081
Cfr42I	CCGCGG	1 cut(s)	671
Cfr9I	CCCGGG	1 cut(s)	473
CseI	GACGC	6 cut(s)	316, 343, 458, 505, 618, 950
Csp6I	GTAC	4 cut(s)	10, 29, 529, 1185
CviAII	CATG	4 cut(s)	89, 420, 971, 1094
CviQI	GTAC	4 cut(s)	10, 29, 529, 1185
DdeI	CTNAG	1 cut(s)	452
DinI	GGCGCC	2 cut(s)	262, 581
DpnI	GATC	4 cut(s)	189, 612, 637, 1204
DpnII	GATC	4 cut(s)	187, 610, 635, 1202
DrdI	GACNNNNNNGTC	1 cut(s)	518
DriI	GACNNNNNGTC	1 cut(s)	538
DseDI	GACNNNNNNGTC	1 cut(s)	518
EaeI	YGGCCR	4 cut(s)	252, 484, 768, 844
EagI	CGGCCG	1 cut(s)	484
Eam1105I	GACNNNNNGTC	1 cut(s)	538
EclXI	CGGCCG	1 cut(s)	484
Eco24I	GRGCYC	1 cut(s)	827
Eco47I	GGWCC	7 cut(s)	207, 490, 648, 664, 1035, 1103, 1177
Eco52I	CGGCCG	1 cut(s)	484
Eco57I	CTGAAG	1 cut(s)	941
Eco88I	CYCGRG	5 cut(s)	473, 494, 536, 623, 1025
Eco91I	GGTNACC	1 cut(s)	719
EcoO109I	RGGNCCY	4 cut(s)	490, 648, 664, 824
EcoO65I	GGTNACC	1 cut(s)	719
EcoRII	CCWGG	2 cut(s)	332, 765
EcoT38I	GRGCYC	1 cut(s)	827
EgeI	GGCGCC	2 cut(s)	262, 581
EheI	GGCGCC	2 cut(s)	262, 581
Esp3I	CGTCTC	3 cut(s)	244, 271, 299
FaeI	CATG	4 cut(s)	92, 423, 974, 1097
FaqI	GGGAC	7 cut(s)	230, 456, 518, 526, 661, 677, 919
FatI	CATG	4 cut(s)	88, 419, 970, 1093
FauI	CCCGC	8 cut(s)	451, 551, 569, 675, 709, 939, 1025, 1189
FauNDI	CATATG	1 cut(s)	434
FblI	GTMKAC	1 cut(s)	801
Fnu4HI	GCNGC	6 cut(s)	414, 417, 457, 484, 583, 1160
FokI	GGATG	3 cut(s)	229, 789, 904
FriOI	GRGCYC	1 cut(s)	827
Fsp4HI	GCNGC	6 cut(s)	414, 417, 457, 484, 583, 1160
FspBI	CTAG	5 cut(s)	204, 314, 404, 596, 696
GlaI	GCGC	4 cut(s)	262, 563, 581, 945
GluI	GCNGC	6 cut(s)	414, 417, 457, 484, 583, 1160
GsaI	CCCAGC	1 cut(s)	684
GsuI	CTGGAG	1 cut(s)	1027
HaeII	RGCGCY	2 cut(s)	264, 583
HaeIII	GGCC	6 cut(s)	254, 486, 759, 770, 825, 846
HgaI	GACGC	6 cut(s)	316, 343, 458, 505, 618, 950
HhaI	GCGC	4 cut(s)	263, 564, 582, 946
Hin1I	GRCGYC	6 cut(s)	261, 393, 469, 516, 580, 629
Hin1II	CATG	4 cut(s)	92, 423, 974, 1097
Hin6I	GCGC	4 cut(s)	261, 562, 580, 944
HinP1I	GCGC	4 cut(s)	261, 562, 580, 944
HinfI	GANTC	3 cut(s)	282, 345, 539
HphI	GGTGA	2 cut(s)	1088, 1184
Hpy166II	GTNNAC	3 cut(s)	31, 802, 1185
Hpy188III	TCNNGA	6 cut(s)	52, 370, 633, 1006, 1141, 1254
Hpy8I	GTNNAC	3 cut(s)	31, 802, 1185
HpyAV	CCTTC	3 cut(s)	557, 760, 1159
HpyCH4III	ACNGT	3 cut(s)	235, 859, 1172
HpyCH4IV	ACGT	4 cut(s)	393, 798, 863, 959
HpyCH4V	TGCA	4 cut(s)	4, 419, 438, 1093
HpyF10VI	GCNNNNNNNGC	8 cut(s)	260, 462, 568, 577, 582, 591, 843, 1152
HpyF3I	CTNAG	1 cut(s)	452
HpySE526I	ACGT	4 cut(s)	393, 798, 863, 959
Hsp92I	GRCGYC	6 cut(s)	261, 393, 469, 516, 580, 629
Hsp92II	CATG	4 cut(s)	92, 423, 974, 1097
HspAI	GCGC	4 cut(s)	261, 562, 580, 944
KasI	GGCGCC	2 cut(s)	260, 579
KflI	GGGWCCC	2 cut(s)	648, 664
Kpn2I	TCCGGA	1 cut(s)	632
KspI	CCGCGG	1 cut(s)	671
Kzo9I	GATC	4 cut(s)	187, 610, 635, 1202
LmnI	GCTCC	4 cut(s)	15, 591, 930, 984
Lsp1109I	GCAGC	3 cut(s)	403, 425, 468
LweI	GCATC	1 cut(s)	796
MaeI	CTAG	5 cut(s)	204, 314, 404, 596, 696
MaeII	ACGT	4 cut(s)	393, 798, 863, 959
MaeIII	GTNAC	4 cut(s)	135, 520, 719, 859
MalI	GATC	4 cut(s)	189, 612, 637, 1204
MboI	GATC	4 cut(s)	187, 610, 635, 1202
MboII	GAAGA	5 cut(s)	349, 891, 934, 950, 1248
MflI	RGATCY	3 cut(s)	610, 635, 1202
MhlI	GDGCHC	2 cut(s)	573, 827
MluCI	AATT	2 cut(s)	604, 951
Mly113I	GGCGCC	2 cut(s)	261, 580
MlyI	GAGTC	2 cut(s)	291, 548
MmeI	TCCRAC	4 cut(s)	294, 663, 690, 754
MroI	TCCGGA	1 cut(s)	632
MseI	TTAA	1 cut(s)	84
MspA1I	CMGCKG	3 cut(s)	416, 465, 670
MspR9I	CCNGG	8 cut(s)	334, 474, 475, 488, 615, 725, 767, 904
MvaI	CCWGG	2 cut(s)	334, 767
MvnI	CGCG	5 cut(s)	564, 585, 670, 944, 946
MwoI	GCNNNNNNNGC	8 cut(s)	260, 462, 568, 577, 582, 591, 843, 1152
NarI	GGCGCC	2 cut(s)	261, 580
NciI	CCSGG	6 cut(s)	474, 475, 488, 615, 725, 904
NdeI	CATATG	1 cut(s)	434
NdeII	GATC	4 cut(s)	187, 610, 635, 1202
NlaIII	CATG	4 cut(s)	92, 423, 974, 1097
NmuCI	GTSAC	2 cut(s)	520, 859
NspI	RCATGY	1 cut(s)	423
PaeI	GCATGC	1 cut(s)	423
PaeR7I	CTCGAG	1 cut(s)	536
PcsI	WCGNNNNNNNCGW	8 cut(s)	285, 393, 516, 564, 846, 855, 999, 1250
PfeI	GAWTC	1 cut(s)	345
PflFI	GACNNNGTC	2 cut(s)	392, 515
PfoI	TCCNGGA	1 cut(s)	902
PkrI	GCNGC	6 cut(s)	415, 418, 458, 485, 584, 1161
PleI	GAGTC	2 cut(s)	290, 547
PluTI	GGCGCC	2 cut(s)	264, 583
PpsI	GAGTC	2 cut(s)	290, 547
PpuMI	RGGWCCY	3 cut(s)	490, 648, 664
PshAI	GACNNNNGTC	1 cut(s)	915
Psp5II	RGGWCCY	3 cut(s)	490, 648, 664
Psp6I	CCWGG	2 cut(s)	332, 765
PspEI	GGTNACC	1 cut(s)	719
PspFI	CCCAGC	1 cut(s)	680
PspGI	CCWGG	2 cut(s)	332, 765
PspOMI	GGGCCC	1 cut(s)	823
PspPPI	RGGWCCY	3 cut(s)	490, 648, 664
PspXI	VCTCGAGB	1 cut(s)	536
PsrI	GAACNNNNNNTAC	2 cut(s)	857, 889
PsuI	RGATCY	3 cut(s)	610, 635, 1202
PsyI	GACNNNGTC	2 cut(s)	392, 515
PvuII	CAGCTG	1 cut(s)	416
RsaI	GTAC	4 cut(s)	11, 30, 530, 1186
RsaNI	GTAC	4 cut(s)	10, 29, 529, 1185
SacII	CCGCGG	1 cut(s)	671
SaqAI	TTAA	1 cut(s)	84
SatI	GCNGC	6 cut(s)	414, 417, 457, 484, 583, 1160
Sau3AI	GATC	4 cut(s)	187, 610, 635, 1202
SchI	GAGTC	2 cut(s)	291, 548
ScrFI	CCNGG	8 cut(s)	334, 474, 475, 488, 615, 725, 767, 904
SduI	GDGCHC	2 cut(s)	573, 827
SfaNI	GCATC	1 cut(s)	796
SfcI	CTRYAG	2 cut(s)	183, 349
SfoI	GGCGCC	2 cut(s)	262, 581
Sfr274I	CTCGAG	1 cut(s)	536
Sfr303I	CCGCGG	1 cut(s)	671
SgrAI	CRCCGGYG	1 cut(s)	257
SgrBI	CCGCGG	1 cut(s)	671
SinI	GGWCC	7 cut(s)	207, 490, 648, 664, 1035, 1103, 1177
SlaI	CTCGAG	1 cut(s)	536
SmaI	CCCGGG	1 cut(s)	475
SmlI	CTYRAG	1 cut(s)	536
SmoI	CTYRAG	1 cut(s)	536
SphI	GCATGC	1 cut(s)	423
Sse9I	AATT	2 cut(s)	604, 951
SspDI	GGCGCC	2 cut(s)	260, 579
SspMI	CTAG	5 cut(s)	204, 314, 404, 596, 696
StyD4I	CCNGG	8 cut(s)	332, 472, 473, 486, 613, 723, 765, 902
TaaI	ACNGT	3 cut(s)	235, 859, 1172
TaiI	ACGT	4 cut(s)	396, 801, 866, 962
TaqI	TCGA	6 cut(s)	288, 294, 537, 558, 840, 879
TaqII	GACCGA	1 cut(s)	1146
TasI	AATT	2 cut(s)	604, 951
TauI	GCSGC	3 cut(s)	486, 585, 1162
TfiI	GAWTC	1 cut(s)	345
Tru1I	TTAA	1 cut(s)	84
Tru9I	TTAA	1 cut(s)	84
TscAI	CASTG	3 cut(s)	81, 1153, 1187
TseFI	GTSAC	2 cut(s)	520, 859
TseI	GCWGC	3 cut(s)	413, 416, 456
Tsp45I	GTSAC	2 cut(s)	520, 859
TspDTI	ATGAA	1 cut(s)	116
TspGWI	ACGGA	4 cut(s)	123, 539, 696, 991
TspMI	CCCGGG	1 cut(s)	473
TspRI	CASTG	3 cut(s)	81, 1153, 1187
Tth111I	GACNNNGTC	2 cut(s)	392, 515
VpaK11BI	GGWCC	7 cut(s)	207, 490, 648, 664, 1035, 1103, 1177
XapI	RAATTY	1 cut(s)	951
XceI	RCATGY	1 cut(s)	423
XhoI	CTCGAG	1 cut(s)	536
XmaI	CCCGGG	1 cut(s)	473
XmiI	GTMKAC	1 cut(s)	801
XspI	CTAG	5 cut(s)	204, 314, 404, 596, 696
ZraI	GACGTC	1 cut(s)	394

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.