Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0004088

Physical Location & Seq

Genomic Coordinates Forward (+)

22824557 .. 22828658

Gene Structure 4102 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g31630.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGCAATCAGTTCATGAGAATAAGAGGAATAATTTGAAGCGTTCGAGATCATTTACTCGCGAAATGCCGGTCACGGATTGTAATATCTCACAGAAGCTTGATGACTGTATTGTTTTTCCGGTTGAGGAGATTGTGCAGCATCCTCTGCCTGGATATGTTGCTCCGGCGTCGATTAGTTTTAGTTTAGATGATAGCATTGTGACGTATCTGTTTAGTCCTGATCAGAGTTTGAATCGGAAGGTGTATGCGTTTGATTTGAAGAGTTGTAATGAGGAGGTGTGTTTTAGTCCTCCTGATGGTGGACTTGACGAGAGTAATATATCGGAGGAGGAGAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGGTTGGGAGTGACGAGGTATGAATGGGTGAAGACAAGCTCGGCAAAGAGAGCAATCATGGTGCCATTGCCAGCAGGGATTTATTTCCAGGATCTTTCATGTTCAAAACCGGAGCTCAAGCTTCCAAGCACACCGTCTTCACCAATTATTGATCCCCATCTATCCCCGGATGGTACAATGCTCGGTTATGTAAAAGACAGCGAGTTGCATGTTCTAAATTTGTTGTACAATGAATCAAAACAGCTAACAGTTGGCGCTAGGGGAGATGTTTTGACTCATGGCCTTGCTGAATATATAGCGCAGGAAGAAATGGACCGCAAGAATGGATACTGGTGGTCTCTAGACAGCAAGTTCATTGCGTTCACAGAAGTTGATTCCTCTGAGATTCCTCTCTTCAGAATCATGCATCAAGGTAAAAGTTCTGTTGGTTTAGAAGCTCAAGAAGATCACCCTTATCCCTTTGCGGGAGCTTCAAATGTCAAAGTTCGCCTAGGAGTAGTTTCCTCTACTGGAGGTCCTGTTACTTGGATGGAGCTTCTCTGTGGGGGTACAGATCAACCAGACAATGAGGAGGAATATCTGGCAAGAGTAAATTGGATGCATGGAAATGTTCTAATTGCTCAGGTTCTGAACAGGTCTCACAGCAAGCTGAAGCTCCTTAAGTTTGATATTAAAAATGGGAAGAGAAAAGTTTTATTGGTAGAAGAACAATGCACATGGGTCAACTTACATGACTGTTTCACACCTCTAGACAAAGGACTAACCAAATCTTCTGGGGGATTTATCTGGGCAAGTGAGAAATCTGGATTCAAACATCTTTACCTACATGATGCCAATGGGACATGCTTAGGTCCTATCACTGAAGGAGAATGGGTGGTTGAGCAGATTGCTGGCGTAAATGAAGCTGCTGGTCTTGTTTATTTCACTGGAACTTTGGATGGGCCCTTAGAATCACACCTTTATTGTACCAAACTATTCACAGATGGAAGCCAACCCTTGCAAGCTCCAGTGAAGTTGACTCGCAACAAGGGGAGGCATATCGTCGTGCTCGATCATCATATGAGGAATTTTGTTGATATCCACGACTCCCTAGATTTTCCTCCAAAGGTTTTACTCTGCTCCTTGCACGATGGAAGTATCATTATGCCTCTGTATGAGCAGCCACTCACAATCCCAAAATTCAAAAGGCTTCAACTTCAGCCACCAGAGTTGGTTCATTTATGGGCTAATGATGGGTCAACATTGTATGGGGCTCTATACAAGCCTGATGCAGAAAAATTTGGACCTCCACCTTATAAAACGATGATCTATGTGTATGGTGGACCATGTGTCCAGCTTGTTTCTGATTCTTGGATAAGTACAGTTGACATGAGAGCGCAGTTTCTAAGAAGTAAAGGCATCTTAGTATGGAAGTTGGATAACAGAGGAAGTGCTCGACGTGGACTGACATTTGAAGGCTCTTTGAAACACAATGCTGGTCGTATTGATGCCGATGATCAACTGACGGGGGCCCAGTGGCTTATAGACAAAGGACTAGCAGAAGCAGGTCACATTGGATTGTATGGTTGGAGCTATGGTGGGTATCTTTCAGCTATGTCTTTGGCCAGGTTTCCTGATGTGTTCCGATGTGCAGTGTCTGGTGCCCCTGTAACAGCGTGGGATGGGTACGACACATTTTATACTGAGAAATATATGGGACTTCCTTTTGAGAATGAAGAAAGTTACGAGTATAGCTCAATAATGCACCATGTGCACAAGATGAAGGGAAAATTGTTACTTGTGCACGGAATGATTGATGAAAATGTGCACTTCAGACATACAGCCAGGCTTGTCAATGCACTCATTGCAGCTAGGAAGACTTATGAACTGTTAATTTTCCCAGATGAACGACACATGCCACGCCGGCATAGTGATCGAGTTTATATGGAAGAAAGGATTTGGGAATTCATAGAAAGAAACTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04974 map04974

Pfam Domains

Protein Families

DPPIV_N Peptidase_S9

Protein Analysis

776

Amino Acids

87.59

Weight (kDa)

6.1

Isoelectric Point (pI)

46.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DPPIV_N	PF00930	143 - 489	1.7e-78	Dipeptidyl peptidase IV (DPP IV) N-terminal region
Peptidase_S9	PF00326	576 - 775	5.8e-54	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24260 AT5G24260 AT5G24260 AT5G24260 AT5G24260
fragaria_vesca	FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630
malus_domestica	MD07G1288900.v1.1
prunus_persica	Prupe.2G310400_v2.0.a1 Prupe.2G310400_v2.0.a1 Prupe.2G310400_v2.0.a1
pyrus_communis	pycom01g22900 pycom07g26150 pycom07g26160
rosa_chinensis	RchiOBHm_Chr1g0380701
rosa_laevigata	RLG00000026277
rosa_multiflora	Rmu_co8317175.1_g000001 Rmu_co8479769.1_g000001 Rmu_sc0001637.1_g000009
rosa_roxburghii	Rroxscaffold_4G00279100
rosa_rugosa	Rorug01G0423600 Rorug01G0423700 Rorug01G0423700
rosa_samantha	Rh1AG447900 Rh1BG403300 Rh1CG417500 Rh1DG433600
rosa_wichuraiana	Rw0G005860 Rw1G038980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1659
Acc36I	ACCTGC	1 cut(s)	1898
AccB1I	GGYRCC	2 cut(s)	424, 2003
AccII	CGCG	1 cut(s)	60
AciI	CCGC	2 cut(s)	679, 827
AclWI	GGATC	2 cut(s)	462, 509
AcoI	YGGCCR	1 cut(s)	1965
AcsI	RAATTY	5 cut(s)	580, 1429, 1541, 1640, 2306
AcuI	CTGAAG	5 cut(s)	742, 1034, 1245, 1544, 2158
AcyI	GRCGYC	1 cut(s)	167
AdeI	CACNNNGTG	1 cut(s)	2113
AfaI	GTAC	6 cut(s)	538, 590, 913, 1330, 1723, 2030
AfiI	CCNNNNNNNGG	4 cut(s)	149, 296, 299, 827
AflII	CTTAAG	1 cut(s)	1022
AhdI	GACNNNNNGTC	1 cut(s)	1691
AjiI	CACGTC	1 cut(s)	1802
AjnI	CCWGG	4 cut(s)	148, 450, 1967, 2186
Alw21I	GWGCWC	6 cut(s)	480, 1413, 1798, 2118, 2148, 2172
Alw26I	GTCTC	2 cut(s)	705, 1005
Alw44I	GTGCAC	3 cut(s)	2114, 2144, 2168
AlwI	GGATC	2 cut(s)	462, 509
AlwNI	CAGNNNCTG	2 cut(s)	991, 2000
AoxI	GGCC	4 cut(s)	643, 1304, 1872, 1965
ApaI	GGGCCC	2 cut(s)	1308, 1876
ApaLI	GTGCAC	3 cut(s)	2114, 2144, 2168
ApeKI	GCWGC	4 cut(s)	136, 1268, 1522, 2210
ApoI	RAATTY	5 cut(s)	580, 1429, 1541, 1640, 2306
ArsI	GACNNNNNNTTYG	2 cut(s)	54, 86
AspA2I	CCTAGG	1 cut(s)	853
AspLEI	GCGC	3 cut(s)	620, 664, 1741
AspS9I	GGNCC	9 cut(s)	676, 878, 1214, 1304, 1305, 1646, 1685, 1872, 1873
AsuC2I	CCSGG	1 cut(s)	530
AsuHPI	GGTGA	3 cut(s)	403, 495, 803
AvaII	GGWCC	5 cut(s)	676, 878, 1214, 1646, 1685
AvrII	CCTAGG	1 cut(s)	853
BaeGI	GKGCMC	6 cut(s)	1308, 1876, 2008, 2118, 2148, 2172
BalI	TGGCCA	1 cut(s)	1967
BanI	GGYRCC	2 cut(s)	424, 2003
BanII	GRGCYC	4 cut(s)	480, 1308, 1618, 1876
BbsI	GAAGAC	3 cut(s)	401, 492, 2225
Bbv12I	GWGCWC	6 cut(s)	480, 1413, 1798, 2118, 2148, 2172
BbvI	GCAGC	4 cut(s)	148, 1255, 1534, 2222
BccI	CCATC	9 cut(s)	290, 527, 528, 886, 1295, 1340, 1487, 1589, 2018
BcgI	CGANNNNNNTGC	2 cut(s)	2258, 2292
BciT130I	CCWGG	4 cut(s)	150, 452, 1969, 2188
BciVI	GTATCC	1 cut(s)	683
BclI	TGATCA	2 cut(s)	220, 1858
BcnI	CCSGG	1 cut(s)	530
BcoDI	GTCTC	2 cut(s)	705, 1005
BfaI	CTAG	7 cut(s)	621, 704, 854, 1112, 1454, 1898, 2214
BfoI	RGCGCY	1 cut(s)	621
BfrI	CTTAAG	1 cut(s)	1022
BfuAI	ACCTGC	1 cut(s)	1898
BfuI	GTATCC	1 cut(s)	683
BglI	GCCNNNNNGGC	1 cut(s)	2266
BisI	GCNGC	4 cut(s)	137, 1269, 1523, 2211
BlnI	CCTAGG	1 cut(s)	853
BlsI	GCNGC	4 cut(s)	138, 1270, 1524, 2212
Bme1390I	CCNGG	5 cut(s)	150, 452, 530, 1969, 2188
Bme18I	GGWCC	5 cut(s)	676, 878, 1214, 1646, 1685
BmeRI	GACNNNNNGTC	1 cut(s)	1691
BmgBI	CACGTC	1 cut(s)	1802
BmgT120I	GGNCC	9 cut(s)	676, 878, 1214, 1304, 1305, 1646, 1685, 1872, 1873
BmiI	GGNNCC	5 cut(s)	426, 1306, 1873, 1874, 2005
BmrFI	CCNGG	5 cut(s)	150, 452, 530, 1969, 2188
BmrI	ACTGGG	1 cut(s)	1870
BmsI	GCATC	7 cut(s)	148, 778, 951, 1183, 1621, 1770, 1840
BmuI	ACTGGG	1 cut(s)	1870
BpiI	GAAGAC	3 cut(s)	401, 492, 2225
BplI	GAGNNNNNCTC	2 cut(s)	2081, 2113
BpmI	CTGGAG	2 cut(s)	894, 1353
Bpu10I	CCTNAGC	2 cut(s)	984, 1210
BpuEI	CTTGAG	2 cut(s)	464, 786
BpuMI	CCSGG	1 cut(s)	530
BsaBI	GATNNNNATC	1 cut(s)	519
BsaHI	GRCGYC	1 cut(s)	167
BsaI	GGTCTC	2 cut(s)	705, 1005
BsaJI	CCNNGG	2 cut(s)	528, 853
BsaWI	WCCGGW	2 cut(s)	118, 472
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 296, 299, 827
Bse118I	RCCGGY	2 cut(s)	67, 2265
Bse1I	ACTGG	5 cut(s)	698, 877, 1294, 1370, 1876
Bse3DI	GCAATG	3 cut(s)	428, 717, 2205
Bse8I	GATNNNNATC	1 cut(s)	519
BseBI	CCWGG	4 cut(s)	150, 452, 1969, 2188
BseDI	CCNNGG	2 cut(s)	528, 853
BseGI	GGATG	6 cut(s)	139, 538, 897, 966, 1306, 2029
BseJI	GATNNNNATC	1 cut(s)	519
BseLI	CCNNNNNNNGG	4 cut(s)	149, 296, 299, 827
BseMI	GCAATG	3 cut(s)	428, 717, 2205
BseMII	CTCAG	3 cut(s)	735, 998, 2037
BseNI	ACTGG	5 cut(s)	698, 877, 1294, 1370, 1876
BseRI	GAGGAG	6 cut(s)	140, 287, 341, 344, 355, 947
BseSI	GKGCMC	6 cut(s)	1308, 1876, 2008, 2118, 2148, 2172
BseXI	GCAGC	4 cut(s)	148, 1255, 1534, 2222
BsgI	GTGCAG	2 cut(s)	155, 2013
Bsh1236I	CGCG	1 cut(s)	60
BshFI	GGCC	4 cut(s)	645, 1306, 1874, 1967
BshNI	GGYRCC	2 cut(s)	424, 2003
BsiHKAI	GWGCWC	6 cut(s)	480, 1413, 1798, 2118, 2148, 2172
BsiSI	CCGG	6 cut(s)	68, 119, 164, 473, 530, 2266
BslFI	GGGAC	2 cut(s)	1216, 2073
BslI	CCNNNNNNNGG	4 cut(s)	149, 296, 299, 827
BsmAI	GTCTC	2 cut(s)	705, 1005
BsmFI	GGGAC	2 cut(s)	1216, 2073
BsnI	GGCC	4 cut(s)	645, 1306, 1874, 1967
Bso31I	GGTCTC	2 cut(s)	705, 1005
Bsp120I	GGGCCC	2 cut(s)	1304, 1872
Bsp1407I	TGTACA	1 cut(s)	588
Bsp68I	TCGCGA	1 cut(s)	60
BspACI	CCGC	2 cut(s)	679, 827
BspANI	GGCC	4 cut(s)	645, 1306, 1874, 1967
BspCNI	CTCAG	3 cut(s)	736, 997, 2038
BspFNI	CGCG	1 cut(s)	60
BspHI	TCATGA	1 cut(s)	13
BspLI	GGNNCC	5 cut(s)	426, 1306, 1873, 1874, 2005
BspMI	ACCTGC	1 cut(s)	1898
BspPI	GGATC	2 cut(s)	462, 509
BspT107I	GGYRCC	2 cut(s)	424, 2003
BspTI	CTTAAG	1 cut(s)	1022
BspTNI	GGTCTC	2 cut(s)	705, 1005
BsrDI	GCAATG	3 cut(s)	428, 717, 2205
BsrFI	RCCGGY	2 cut(s)	67, 2265
BsrGI	TGTACA	1 cut(s)	588
BsrI	ACTGG	5 cut(s)	698, 877, 1294, 1370, 1876
BssAI	RCCGGY	2 cut(s)	67, 2265
BssECI	CCNNGG	2 cut(s)	528, 853
BssNI	GRCGYC	1 cut(s)	167
BssT1I	CCWWGG	1 cut(s)	853
Bst2UI	CCWGG	4 cut(s)	150, 452, 1969, 2188
Bst4CI	ACNGT	6 cut(s)	107, 498, 613, 1100, 1726, 2232
Bst6I	CTCTTC	3 cut(s)	254, 761, 1040
BstACI	GRCGYC	1 cut(s)	167
BstAFI	CTTAAG	1 cut(s)	1022
BstAPI	GCANNNNNTGC	3 cut(s)	145, 2113, 2207
BstAUI	TGTACA	1 cut(s)	588
BstC8I	GCNNGC	5 cut(s)	435, 1010, 1255, 1365, 2267
BstDEI	CTNAG	7 cut(s)	744, 984, 1210, 1309, 1748, 1765, 2046
BstF5I	GGATG	6 cut(s)	139, 538, 897, 966, 1306, 2029
BstFNI	CGCG	1 cut(s)	60
BstH2I	RGCGCY	1 cut(s)	621
BstHHI	GCGC	3 cut(s)	620, 664, 1741
BstMAI	GTCTC	2 cut(s)	705, 1005
BstMWI	GCNNNNNNNGC	5 cut(s)	145, 413, 2113, 2207, 2266
BstNI	CCWGG	4 cut(s)	150, 452, 1969, 2188
BstNSI	RCATGY	3 cut(s)	575, 1209, 2260
BstSCI	CCNGG	5 cut(s)	148, 450, 528, 1967, 2186
BstSLI	GKGCMC	6 cut(s)	1308, 1876, 2008, 2118, 2148, 2172
BstUI	CGCG	1 cut(s)	60
BstV1I	GCAGC	4 cut(s)	148, 1255, 1534, 2222
BstV2I	GAAGAC	3 cut(s)	401, 492, 2225
BstX2I	RGATCY	1 cut(s)	454
BstYI	RGATCY	1 cut(s)	454
BsuI	GTATCC	1 cut(s)	683
BsuRI	GGCC	4 cut(s)	645, 1306, 1874, 1967
BtrI	CACGTC	1 cut(s)	1802
BtsCI	GGATG	6 cut(s)	139, 538, 897, 966, 1306, 2029
BtsI	GCAGTG	1 cut(s)	2001
BtsIMutI	CAGTG	5 cut(s)	1221, 1287, 1377, 1883, 2001
BtuMI	TCGCGA	1 cut(s)	60
BveI	ACCTGC	1 cut(s)	1898
Cac8I	GCNNGC	5 cut(s)	435, 1010, 1255, 1365, 2267
CaiI	CAGNNNCTG	2 cut(s)	991, 2000
CciI	TCATGA	1 cut(s)	13
CfoI	GCGC	3 cut(s)	620, 664, 1741
Cfr10I	RCCGGY	2 cut(s)	67, 2265
Cfr13I	GGNCC	9 cut(s)	676, 878, 1214, 1304, 1305, 1646, 1685, 1872, 1873
CseI	GACGC	1 cut(s)	156
Csp6I	GTAC	6 cut(s)	537, 589, 912, 1329, 1722, 2029
CspCI	CAANNNNNGTGG	2 cut(s)	1554, 1589
CviQI	GTAC	6 cut(s)	537, 589, 912, 1329, 1722, 2029
DdeI	CTNAG	7 cut(s)	744, 984, 1210, 1309, 1748, 1765, 2046
DraIII	CACNNNGTG	1 cut(s)	2113
DriI	GACNNNNNGTC	1 cut(s)	1691
EaeI	YGGCCR	1 cut(s)	1965
Eam1104I	CTCTTC	3 cut(s)	254, 761, 1040
Eam1105I	GACNNNNNGTC	1 cut(s)	1691
EarI	CTCTTC	3 cut(s)	254, 761, 1040
Ecl136II	GAGCTC	1 cut(s)	478
Eco130I	CCWWGG	1 cut(s)	853
Eco24I	GRGCYC	4 cut(s)	480, 1308, 1618, 1876
Eco31I	GGTCTC	2 cut(s)	705, 1005
Eco32I	GATATC	1 cut(s)	1441
Eco47I	GGWCC	5 cut(s)	676, 878, 1214, 1646, 1685
Eco53kI	GAGCTC	1 cut(s)	478
Eco57I	CTGAAG	5 cut(s)	742, 1034, 1245, 1544, 2158
EcoICRI	GAGCTC	1 cut(s)	478
EcoO109I	RGGNCCY	4 cut(s)	878, 1214, 1305, 1872
EcoRI	GAATTC	1 cut(s)	2306
EcoRII	CCWGG	4 cut(s)	148, 450, 1967, 2186
EcoRV	GATATC	1 cut(s)	1441
EcoT14I	CCWWGG	1 cut(s)	853
EcoT22I	ATGCAT	2 cut(s)	771, 966
EcoT38I	GRGCYC	4 cut(s)	480, 1308, 1618, 1876
ErhI	CCWWGG	1 cut(s)	853
FaqI	GGGAC	2 cut(s)	1216, 2073
FauI	CCCGC	1 cut(s)	820
FauNDI	CATATG	1 cut(s)	1422
FbaI	TGATCA	2 cut(s)	220, 1858
Fnu4HI	GCNGC	4 cut(s)	137, 1269, 1523, 2211
FokI	GGATG	6 cut(s)	126, 545, 904, 973, 1313, 2036
FriOI	GRGCYC	4 cut(s)	480, 1308, 1618, 1876
Fsp4HI	GCNGC	4 cut(s)	137, 1269, 1523, 2211
FspBI	CTAG	7 cut(s)	621, 704, 854, 1112, 1454, 1898, 2214
GlaI	GCGC	3 cut(s)	619, 663, 1740
GluI	GCNGC	4 cut(s)	137, 1269, 1523, 2211
GsuI	CTGGAG	2 cut(s)	894, 1353
HaeII	RGCGCY	1 cut(s)	621
HaeIII	GGCC	4 cut(s)	645, 1306, 1874, 1967
HapII	CCGG	6 cut(s)	68, 119, 164, 473, 530, 2266
HgaI	GACGC	1 cut(s)	156
HhaI	GCGC	3 cut(s)	620, 664, 1741
Hin1I	GRCGYC	1 cut(s)	167
Hin6I	GCGC	3 cut(s)	618, 662, 1739
HinP1I	GCGC	3 cut(s)	618, 662, 1739
HincII	GTYRAC	4 cut(s)	1087, 1380, 1602, 1729
HindII	GTYRAC	4 cut(s)	1087, 1380, 1602, 1729
HindIII	AAGCTT	2 cut(s)	95, 482
HpaII	CCGG	6 cut(s)	68, 119, 164, 473, 530, 2266
HphI	GGTGA	3 cut(s)	403, 495, 803
Hpy188I	TCNGA	9 cut(s)	225, 237, 325, 745, 761, 993, 1708, 1988, 2177
Hpy99I	CGWCG	3 cut(s)	172, 1409, 1803
HpyAV	CCTTC	4 cut(s)	232, 1220, 1811, 2119
HpyCH4III	ACNGT	6 cut(s)	107, 498, 613, 1100, 1726, 2232
HpyCH4IV	ACGT	2 cut(s)	203, 1801
HpyF10VI	GCNNNNNNNGC	5 cut(s)	145, 413, 2113, 2207, 2266
HpyF3I	CTNAG	7 cut(s)	744, 984, 1210, 1309, 1748, 1765, 2046
HpySE526I	ACGT	2 cut(s)	203, 1801
Hsp92I	GRCGYC	1 cut(s)	167
HspAI	GCGC	3 cut(s)	618, 662, 1739
KroI	GCCGGC	1 cut(s)	2265
KroNI	GCCGGC	1 cut(s)	2267
Ksp22I	TGATCA	2 cut(s)	220, 1858
LmnI	GCTCC	9 cut(s)	166, 358, 475, 830, 895, 1023, 1372, 1487, 1932
Lsp1109I	GCAGC	4 cut(s)	148, 1255, 1534, 2222
LweI	GCATC	7 cut(s)	148, 778, 951, 1183, 1621, 1770, 1840
MaeI	CTAG	7 cut(s)	621, 704, 854, 1112, 1454, 1898, 2214
MaeII	ACGT	2 cut(s)	203, 1801
MaeIII	GTNAC	8 cut(s)	70, 199, 373, 883, 1910, 2011, 2084, 2136
MflI	RGATCY	1 cut(s)	454
MlsI	TGGCCA	1 cut(s)	1967
MluNI	TGGCCA	1 cut(s)	1967
MlyI	GAGTC	3 cut(s)	631, 1375, 1442
MmeI	TCCRAC	2 cut(s)	1758, 1910
Mox20I	TGGCCA	1 cut(s)	1967
Mph1103I	ATGCAT	2 cut(s)	771, 966
MroNI	GCCGGC	1 cut(s)	2265
MscI	TGGCCA	1 cut(s)	1967
MseI	TTAA	3 cut(s)	1023, 1035, 2234
MslI	CAYNNNNRTG	1 cut(s)	969
Msp20I	TGGCCA	1 cut(s)	1967
MspCI	CTTAAG	1 cut(s)	1022
MspI	CCGG	6 cut(s)	68, 119, 164, 473, 530, 2266
MspR9I	CCNGG	5 cut(s)	150, 452, 530, 1969, 2188
MvaI	CCWGG	4 cut(s)	150, 452, 1969, 2188
MvnI	CGCG	1 cut(s)	60
MwoI	GCNNNNNNNGC	5 cut(s)	145, 413, 2113, 2207, 2266
NaeI	GCCGGC	1 cut(s)	2267
NciI	CCSGG	1 cut(s)	530
NdeI	CATATG	1 cut(s)	1422
NgoMIV	GCCGGC	1 cut(s)	2265
NlaIV	GGNNCC	5 cut(s)	426, 1306, 1873, 1874, 2005
NmeAIII	GCCGAG	1 cut(s)	383
NmuCI	GTSAC	4 cut(s)	70, 199, 373, 1910
NruI	TCGCGA	1 cut(s)	60
NsiI	ATGCAT	2 cut(s)	771, 966
NspI	RCATGY	3 cut(s)	575, 1209, 2260
PagI	TCATGA	1 cut(s)	13
PcsI	WCGNNNNNNNCGW	1 cut(s)	1410
PdiI	GCCGGC	1 cut(s)	2267
PfeI	GAWTC	8 cut(s)	232, 596, 737, 748, 762, 1170, 1313, 1709
PfoI	TCCNGGA	1 cut(s)	450
PkrI	GCNGC	4 cut(s)	138, 1270, 1524, 2212
PleI	GAGTC	3 cut(s)	631, 1375, 1442
PpsI	GAGTC	3 cut(s)	631, 1375, 1442
PpuMI	RGGWCCY	2 cut(s)	878, 1214
PsiI	TTATAA	1 cut(s)	1659
Psp124BI	GAGCTC	1 cut(s)	480
Psp5II	RGGWCCY	2 cut(s)	878, 1214
Psp6I	CCWGG	4 cut(s)	148, 450, 1967, 2186
PspGI	CCWGG	4 cut(s)	148, 450, 1967, 2186
PspN4I	GGNNCC	5 cut(s)	426, 1306, 1873, 1874, 2005
PspOMI	GGGCCC	2 cut(s)	1304, 1872
PspPI	GGNCC	9 cut(s)	676, 878, 1214, 1304, 1305, 1646, 1685, 1872, 1873
PspPPI	RGGWCCY	2 cut(s)	878, 1214
PstNI	CAGNNNCTG	2 cut(s)	991, 2000
PsuI	RGATCY	1 cut(s)	454
RruI	TCGCGA	1 cut(s)	60
RsaI	GTAC	6 cut(s)	538, 590, 913, 1330, 1723, 2030
RsaNI	GTAC	6 cut(s)	537, 589, 912, 1329, 1722, 2029
RseI	CAYNNNNRTG	1 cut(s)	969
SacI	GAGCTC	1 cut(s)	480
SaqAI	TTAA	3 cut(s)	1023, 1035, 2234
SatI	GCNGC	4 cut(s)	137, 1269, 1523, 2211
Sau96I	GGNCC	9 cut(s)	676, 878, 1214, 1304, 1305, 1646, 1685, 1872, 1873
SchI	GAGTC	3 cut(s)	631, 1375, 1442
ScrFI	CCNGG	5 cut(s)	150, 452, 530, 1969, 2188
SfaNI	GCATC	7 cut(s)	148, 778, 951, 1183, 1621, 1770, 1840
SinI	GGWCC	5 cut(s)	676, 878, 1214, 1646, 1685
SmiMI	CAYNNNNRTG	1 cut(s)	969
SmlI	CTYRAG	3 cut(s)	479, 801, 1022
SmoI	CTYRAG	3 cut(s)	479, 801, 1022
SsiI	CCGC	2 cut(s)	679, 827
SspMI	CTAG	7 cut(s)	621, 704, 854, 1112, 1454, 1898, 2214
SstI	GAGCTC	1 cut(s)	480
StyD4I	CCNGG	5 cut(s)	148, 450, 528, 1967, 2186
StyI	CCWWGG	1 cut(s)	853
TaaI	ACNGT	6 cut(s)	107, 498, 613, 1100, 1726, 2232
TaiI	ACGT	2 cut(s)	206, 1804
TaqI	TCGA	5 cut(s)	44, 170, 1413, 1798, 2278
TatI	WGTACW	2 cut(s)	588, 1721
TfiI	GAWTC	8 cut(s)	232, 596, 737, 748, 762, 1170, 1313, 1709
Tru1I	TTAA	3 cut(s)	1023, 1035, 2234
Tru9I	TTAA	3 cut(s)	1023, 1035, 2234
TscAI	CASTG	5 cut(s)	1228, 1294, 1377, 1883, 2001
TseFI	GTSAC	4 cut(s)	70, 199, 373, 1910
TseI	GCWGC	4 cut(s)	136, 1268, 1522, 2210
Tsp45I	GTSAC	4 cut(s)	70, 199, 373, 1910
TspGWI	ACGGA	2 cut(s)	89, 2163
TspRI	CASTG	5 cut(s)	1228, 1294, 1377, 1883, 2001
Vha464I	CTTAAG	1 cut(s)	1022
VneI	GTGCAC	3 cut(s)	2114, 2144, 2168
VpaK11BI	GGWCC	5 cut(s)	676, 878, 1214, 1646, 1685
XapI	RAATTY	5 cut(s)	580, 1429, 1541, 1640, 2306
XbaI	TCTAGA	2 cut(s)	703, 1111
XceI	RCATGY	3 cut(s)	575, 1209, 2260
XmaJI	CCTAGG	1 cut(s)	853
XspI	CTAG	7 cut(s)	621, 704, 854, 1112, 1454, 1898, 2214
Zsp2I	ATGCAT	2 cut(s)	771, 966

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.