Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0004088

Physical Location & Seq

Genomic Coordinates Forward (+)

34984955 .. 34988716

Gene Structure 3762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1288900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGCAACCAGTTGATGAGGATCATAAGAAGAAGAATTTAAAGCGTTCGAGATCATTTACTTTCGACATGCCTGTGACCGACCCTAATTTGACACAAAGTCTTGATGACTGTGTTCTTTTCCCACTTGAAGAGATTGTGCAATACCCGTTGCCGGGATACATTGCTCCCACTTCAATCAGTTTCAGTCCCGATGATACTATTATAACTTATTTGTTCAGTCCTGATCACACATTGAATCGAAAGGTATTTGCTTTCGATCTCAAAACTGGCAAGCAAGAGTTGTGTTTCAGTCCCCCTGATGGCGGACTTGACGAGAGTAATATATCACCGGAGGAAAAGTTGAGGAGAGAGAGGTTGAGGGAGCGCGGGTTGGGAGTGACACGGTATGAATGGGTGAAGACAAGCTCGAAAAGGAAAGCAATCATGGTGCCATTGCCAGCTGGGATTTATTTCCAGGATCTTTCTAGTTCAAATGCCGAGCTTAATCTTCCGAGGACATCAGGTTCACCAATTATTGATCCACATCTGTCACCAGATGGTACAATGCTCGGTTATGTAAGAGATTGCGAGTTGCACGTTCTTAATTTGTTATACAATGAATCTATACAGTTAACGTATGGTGCCAGAGGAGATGTTTTGACGCATGGCCTTGCTGAATATATAGCTCAGGAAGAAATGGACCGCAAGAATGGGTACTGGTGGTCTCTAGACAGCAAATTCATTGCATTCACAGAAGTTGATTCTTCTGAGATTCCGCTTTTCAGAATCATGCATCAAGGTAAAAGCTCTGTTGGTTCAGAAGCTCAAGAAGATCATGCCTATCCCTTTGCGGGAGCTTCAAATGTCAAAGTTCGCCTAGGCGTGGTTTCTTCTGCTGGAGGCCCTATTACTTGGATGGATCTTCTGTGTGGGGGAACAGGTCAACCAGATAGTGAGGACGAATATCTGGCAAGAGTAAATTGGATGCATGGAGATACTTTAATAGCTCAGGTTATGAACAGGTCACACAGCAGACTAAAGATCCTTAAATTCGATATTAAAACTGGGAAGCGAACAGTTTTATTGGAAGAAGAACAAGGAACATGGGTTAGCTTACATGACTGCTTCACACCTCTGGACCGAGGAATAACCAAATTTTCGGGGGGATTTATCTGGGCGAGTGAGAAAACAGGATTTAAACATCTTTATTTGCATGATGCCAATGGAACATGTTTAGGACCTATCACCGAAGGTGACTGGATGGTTGAGCAGATTGCTGGGGTAAATGAAGCTGCCGGACTTGTTTACTTTACTGGAACCTTAGACGGGCCTTTAGAATCACACCTTTATTGTGCTAAGCTACTCACGGATGGAAACCAACCCTTGCAAGCTCCAGTGAGGTTGACTTGTAGCAAGGGGAAGCATGCGGTGGTGCTTGATCATCATATGAAGAACTTTGTTGATATACATGACTCCCTTGATTCTCCCCCTAAAGTTATACTGTGCTCCTTGCACGATGGAAGCTATATTATGCCTCTGTATGAGCCGTCATTAACGGTTCCAAGATTCAAAAAGCTTCAACTTGAGCCACCGGAGTTAGTTCATTTGCAGGCTAATGATGGAACAACATTGTATGCAGCTCTATACAAGCCTGATGAAACAAGATTTGGACCTCCTCCTTACAAAACTTTGATCAGCGTGTATGGTGGACCGAGCGTGCAGCTCGTCTCTGATTCTTGGATTAATACAGTTGACATGAAAGCGCAGTTTCTCAGAAGCAGAGGCATCTTAGTATGGAAGGTGGATAATAGAGGAACTGCCCGGCGTGGGCTGAAGTTCGAAGGCTCTTTAAAATACAATTGTGGTCAGGTTGATGCCGACGACCAACTGACTGGAGCCGACTGGCTTATAGAAAAAGGGTTAGCACGAGCAGGTCACATTGGATTGTATGGTTGGAGCTATGGCGGATATCTTTCAGCCATGACTCTTGCCAGGTTTCCTGATGTCTTCCGGTGTGCAGTGTCCGGCGCCCCTGTTACATCATGGGATGGGTATGACACATTCTATACCGAGAAATACATGGGCCTGCCTTCTGAGAACGAGGAAGGATACGAGTCTAGCTCCGTGATGCACCATGTGCACAAGATGAAAGGAAAGTTGTTGCTCGTCCATGGCATGATCGATGAAAATGTGCATTTCAGGCATACTGCAAGGCTCGTCAATGCTCTTGTTGCGGCTGGAAAGACTTACGAGCTATTAATTTTTCCAGATGAACGTCACATGCCACGCCGGCATAGGGATCGGATTTACATGGAAGAGAGAATCTGGGAGTTCATAGAAAGAAGCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04974 map04974

Pfam Domains

Protein Families

DPPIV_N Peptidase_S9

Protein Analysis

777

Amino Acids

87.28

Weight (kDa)

5.88

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DPPIV_N	PF00930	143 - 490	5.2e-83	Dipeptidyl peptidase IV (DPP IV) N-terminal region
Peptidase_S15	PF02129	533 - 677	7.9e-08	X-Pro dipeptidyl-peptidase (S15 family)
Peptidase_S9	PF00326	577 - 775	1.7e-57	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24260 AT5G24260 AT5G24260 AT5G24260 AT5G24260
fragaria_vesca	FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630
malus_domestica	MD07G1288900.v1.1
prunus_persica	Prupe.2G310400_v2.0.a1 Prupe.2G310400_v2.0.a1 Prupe.2G310400_v2.0.a1
pyrus_communis	pycom01g22900 pycom07g26150 pycom07g26160
rosa_chinensis	RchiOBHm_Chr1g0380701
rosa_laevigata	RLG00000026277
rosa_multiflora	Rmu_co8317175.1_g000001 Rmu_co8479769.1_g000001 Rmu_sc0001637.1_g000009
rosa_roxburghii	Rroxscaffold_4G00279100
rosa_rugosa	Rorug01G0423600 Rorug01G0423700 Rorug01G0423700
rosa_samantha	Rh1AG447900 Rh1BG403300 Rh1CG417500 Rh1DG433600
rosa_wichuraiana	Rw0G005860 Rw1G038980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	203
Acc36I	ACCTGC	1 cut(s)	1901
AccB1I	GGYRCC	3 cut(s)	427, 620, 2006
AccII	CGCG	1 cut(s)	366
AciI	CCGC	8 cut(s)	303, 366, 682, 755, 830, 1406, 1944, 2213
AclWI	GGATC	6 cut(s)	27, 465, 512, 906, 1015, 2286
AcsI	RAATTY	4 cut(s)	34, 716, 1028, 1133
AcuI	CTGAAG	1 cut(s)	1832
AcyI	GRCGYC	1 cut(s)	2007
AdeI	CACNNNGTG	1 cut(s)	2116
AfaI	GTAC	2 cut(s)	541, 695
AfiI	CCNNNNNNNGG	9 cut(s)	151, 152, 299, 302, 830, 862, 1305, 1806, 2275
AflIII	ACRYGT	1 cut(s)	1208
AgsI	TTSAA	7 cut(s)	128, 174, 235, 471, 840, 1549, 1559
AhdI	GACNNNNNGTC	1 cut(s)	96
AjnI	CCWGG	2 cut(s)	453, 1970
AjuI	GAANNNNNNNTTGG	2 cut(s)	1629, 1661
AloI	GAACNNNNNNTCC	2 cut(s)	487, 519
Alw21I	GWGCWC	2 cut(s)	1487, 2121
Alw26I	GTCTC	2 cut(s)	708, 1711
Alw44I	GTGCAC	1 cut(s)	2117
AlwI	GGATC	6 cut(s)	27, 465, 512, 906, 1015, 2286
AoxI	GGCC	4 cut(s)	646, 880, 1307, 2062
ApaLI	GTGCAC	1 cut(s)	2117
ApeKI	GCWGC	3 cut(s)	1271, 1616, 1699
ApoI	RAATTY	4 cut(s)	34, 716, 1028, 1133
AseI	ATTAAT	2 cut(s)	1722, 2237
AspA2I	CCTAGG	1 cut(s)	856
AspLEI	GCGC	3 cut(s)	366, 1744, 2009
AspS9I	GGNCC	8 cut(s)	679, 881, 1117, 1217, 1307, 1649, 1688, 2062
AsuC2I	CCSGG	2 cut(s)	153, 1801
AsuHPI	GGTGA	6 cut(s)	318, 406, 498, 522, 1216, 1244
AsuII	TTCGAA	1 cut(s)	1818
AvaII	GGWCC	5 cut(s)	679, 1117, 1217, 1649, 1688
AvrII	CCTAGG	1 cut(s)	856
BaeGI	GKGCMC	1 cut(s)	2121
BanI	GGYRCC	3 cut(s)	427, 620, 2006
BauI	CACGAG	1 cut(s)	1905
BbsI	GAAGAC	2 cut(s)	404, 1978
Bbv12I	GWGCWC	2 cut(s)	1487, 2121
BbvI	GCAGC	3 cut(s)	1258, 1628, 1711
BccI	CCATC	8 cut(s)	293, 530, 889, 1234, 1343, 1490, 1592, 2021
BceAI	ACGGC	1 cut(s)	1510
BcgI	CGANNNNNNTGC	2 cut(s)	2261, 2295
BciT130I	CCWGG	2 cut(s)	455, 1972
BciVI	GTATCC	2 cut(s)	149, 2081
BclI	TGATCA	3 cut(s)	223, 1417, 1671
BcnI	CCSGG	2 cut(s)	153, 1801
BcoDI	GTCTC	2 cut(s)	708, 1711
BfaI	CTAG	4 cut(s)	465, 707, 857, 2097
BfoI	RGCGCY	1 cut(s)	2010
BfuAI	ACCTGC	1 cut(s)	1901
BfuI	GTATCC	2 cut(s)	149, 2081
BglI	GCCNNNNNGGC	1 cut(s)	2269
BisI	GCNGC	4 cut(s)	1272, 1617, 1700, 2214
BlnI	CCTAGG	1 cut(s)	856
BlpI	GCTNAGC	1 cut(s)	1335
BlsI	GCNGC	4 cut(s)	1273, 1618, 1701, 2215
Bme1390I	CCNGG	4 cut(s)	153, 455, 1801, 1972
Bme18I	GGWCC	5 cut(s)	679, 1117, 1217, 1649, 1688
BmeRI	GACNNNNNGTC	1 cut(s)	96
BmgT120I	GGNCC	8 cut(s)	679, 881, 1117, 1217, 1307, 1649, 1688, 2062
BmiI	GGNNCC	6 cut(s)	429, 622, 1297, 1539, 1876, 2008
BmrFI	CCNGG	4 cut(s)	153, 455, 1801, 1972
BmrI	ACTGGG	1 cut(s)	1053
BmsI	GCATC	6 cut(s)	781, 954, 1186, 1773, 1843, 2097
BmuI	ACTGGG	1 cut(s)	1053
BpiI	GAAGAC	2 cut(s)	404, 1978
BplI	GAGNNNNNCTC	2 cut(s)	2084, 2116
BpmI	CTGGAG	3 cut(s)	897, 1356, 1893
Bpu10I	CCTNAGC	2 cut(s)	666, 987
Bpu1102I	GCTNAGC	1 cut(s)	1335
Bpu14I	TTCGAA	1 cut(s)	1818
BpuEI	CTTGAG	2 cut(s)	789, 1583
BpuMI	CCSGG	2 cut(s)	153, 1801
Bsa29I	ATCGAT	1 cut(s)	2160
BsaBI	GATNNNNATC	2 cut(s)	18, 522
BsaHI	GRCGYC	1 cut(s)	2007
BsaI	GGTCTC	1 cut(s)	708
BsaJI	CCNNGG	4 cut(s)	491, 856, 1120, 2149
BsaWI	WCCGGW	3 cut(s)	328, 1570, 1989
BsaXI	ACNNNNNCTCC	4 cut(s)	323, 353, 353, 383
Bsc4I	CCNNNNNNNGG	9 cut(s)	151, 152, 299, 302, 830, 862, 1305, 1806, 2275
Bse118I	RCCGGY	1 cut(s)	2268
Bse1I	ACTGG	9 cut(s)	8, 271, 701, 1048, 1241, 1297, 1373, 1876, 1886
Bse3DI	GCAATG	3 cut(s)	159, 431, 720
Bse8I	GATNNNNATC	2 cut(s)	18, 522
BseBI	CCWGG	2 cut(s)	455, 1972
BseCI	ATCGAT	1 cut(s)	2160
BseDI	CCNNGG	4 cut(s)	491, 856, 1120, 2149
BseGI	GGATG	5 cut(s)	900, 969, 1245, 1354, 2032
BseJI	GATNNNNATC	2 cut(s)	18, 522
BseLI	CCNNNNNNNGG	9 cut(s)	151, 152, 299, 302, 830, 862, 1305, 1806, 2275
BseMI	GCAATG	3 cut(s)	159, 431, 720
BseMII	CTCAG	5 cut(s)	680, 738, 1001, 1765, 2064
BseNI	ACTGG	9 cut(s)	8, 271, 701, 1048, 1241, 1297, 1373, 1876, 1886
BseRI	GAGGAG	3 cut(s)	358, 642, 1644
BseSI	GKGCMC	1 cut(s)	2121
BseXI	GCAGC	3 cut(s)	1258, 1628, 1711
BseYI	CCCAGC	2 cut(s)	440, 1256
BsgI	GTGCAG	2 cut(s)	1718, 2016
Bsh1236I	CGCG	1 cut(s)	366
BshFI	GGCC	4 cut(s)	648, 882, 1309, 2064
BshNI	GGYRCC	3 cut(s)	427, 620, 2006
BshVI	ATCGAT	1 cut(s)	2160
BsiHKAI	GWGCWC	2 cut(s)	1487, 2121
BsiSI	CCGG	8 cut(s)	152, 329, 1275, 1571, 1801, 1990, 2004, 2269
BslFI	GGGAC	2 cut(s)	171, 276
BslI	CCNNNNNNNGG	9 cut(s)	151, 152, 299, 302, 830, 862, 1305, 1806, 2275
BsmAI	GTCTC	2 cut(s)	708, 1711
BsmBI	CGTCTC	1 cut(s)	1711
BsmFI	GGGAC	2 cut(s)	171, 276
BsmI	GAATGC	1 cut(s)	725
BsnI	GGCC	4 cut(s)	648, 882, 1309, 2064
Bso31I	GGTCTC	1 cut(s)	708
Bsp119I	TTCGAA	1 cut(s)	1818
Bsp1286I	GDGCHC	2 cut(s)	1487, 2121
Bsp1720I	GCTNAGC	1 cut(s)	1335
Bsp19I	CCATGG	1 cut(s)	2149
BspACI	CCGC	8 cut(s)	303, 366, 682, 755, 830, 1406, 1944, 2213
BspANI	GGCC	4 cut(s)	648, 882, 1309, 2064
BspCNI	CTCAG	5 cut(s)	679, 739, 1000, 1764, 2065
BspDI	ATCGAT	1 cut(s)	2160
BspFNI	CGCG	1 cut(s)	366
BspLI	GGNNCC	6 cut(s)	429, 622, 1297, 1539, 1876, 2008
BspMI	ACCTGC	1 cut(s)	1901
BspPI	GGATC	6 cut(s)	27, 465, 512, 906, 1015, 2286
BspT104I	TTCGAA	1 cut(s)	1818
BspT107I	GGYRCC	3 cut(s)	427, 620, 2006
BspTNI	GGTCTC	1 cut(s)	708
BsrDI	GCAATG	3 cut(s)	159, 431, 720
BsrFI	RCCGGY	1 cut(s)	2268
BsrI	ACTGG	9 cut(s)	8, 271, 701, 1048, 1241, 1297, 1373, 1876, 1886
BssAI	RCCGGY	1 cut(s)	2268
BssECI	CCNNGG	4 cut(s)	491, 856, 1120, 2149
BssNI	GRCGYC	1 cut(s)	2007
BssSI	CACGAG	1 cut(s)	1905
BssT1I	CCWWGG	2 cut(s)	856, 2149
Bst2BI	CACGAG	1 cut(s)	1905
Bst2UI	CCWGG	2 cut(s)	455, 1972
Bst4CI	ACNGT	7 cut(s)	110, 384, 609, 1057, 1482, 1537, 1729
Bst6I	CTCTTC	2 cut(s)	123, 2289
BstACI	GRCGYC	1 cut(s)	2007
BstAPI	GCANNNNNTGC	1 cut(s)	2116
BstBI	TTCGAA	1 cut(s)	1818
BstC8I	GCNNGC	8 cut(s)	272, 438, 1368, 1404, 1590, 1697, 2066, 2270
BstDEI	CTNAG	8 cut(s)	666, 747, 987, 1300, 1335, 1751, 1768, 2073
BstDSI	CCRYGG	1 cut(s)	2149
BstF5I	GGATG	5 cut(s)	900, 969, 1245, 1354, 2032
BstFNI	CGCG	1 cut(s)	366
BstH2I	RGCGCY	1 cut(s)	2010
BstHHI	GCGC	3 cut(s)	366, 1744, 2009
BstMAI	GTCTC	2 cut(s)	708, 1711
BstMWI	GCNNNNNNNGC	4 cut(s)	2116, 2179, 2210, 2269
BstNI	CCWGG	2 cut(s)	455, 1972
BstNSI	RCATGY	4 cut(s)	70, 1212, 1406, 2263
BstSCI	CCNGG	4 cut(s)	151, 453, 1799, 1970
BstSLI	GKGCMC	1 cut(s)	2121
BstUI	CGCG	1 cut(s)	366
BstV1I	GCAGC	3 cut(s)	1258, 1628, 1711
BstV2I	GAAGAC	2 cut(s)	404, 1978
BstX2I	RGATCY	3 cut(s)	457, 898, 1020
BstXI	CCANNNNNNTGG	1 cut(s)	1871
BstYI	RGATCY	3 cut(s)	457, 898, 1020
Bsu15I	ATCGAT	1 cut(s)	2160
BsuI	GTATCC	2 cut(s)	149, 2081
BsuRI	GGCC	4 cut(s)	648, 882, 1309, 2064
BsuTUI	ATCGAT	1 cut(s)	2160
BtgI	CCRYGG	1 cut(s)	2149
BtsCI	GGATG	5 cut(s)	900, 969, 1245, 1354, 2032
BtsI	GCAGTG	1 cut(s)	2004
BtsIMutI	CAGTG	2 cut(s)	1380, 2004
BveI	ACCTGC	1 cut(s)	1901
Cac8I	GCNNGC	8 cut(s)	272, 438, 1368, 1404, 1590, 1697, 2066, 2270
CfoI	GCGC	3 cut(s)	366, 1744, 2009
Cfr10I	RCCGGY	1 cut(s)	2268
Cfr13I	GGNCC	8 cut(s)	679, 881, 1117, 1217, 1307, 1649, 1688, 2062
ClaI	ATCGAT	1 cut(s)	2160
CseI	GACGC	1 cut(s)	649
Csp6I	GTAC	2 cut(s)	540, 694
CviQI	GTAC	2 cut(s)	540, 694
DdeI	CTNAG	8 cut(s)	666, 747, 987, 1300, 1335, 1751, 1768, 2073
DinI	GGCGCC	1 cut(s)	2008
DraI	TTTAAA	3 cut(s)	39, 1177, 1830
DraIII	CACNNNGTG	1 cut(s)	2116
DriI	GACNNNNNGTC	1 cut(s)	96
Eam1104I	CTCTTC	2 cut(s)	123, 2289
Eam1105I	GACNNNNNGTC	1 cut(s)	96
EarI	CTCTTC	2 cut(s)	123, 2289
EciI	GGCGGA	2 cut(s)	318, 1959
Eco130I	CCWWGG	2 cut(s)	856, 2149
Eco31I	GGTCTC	1 cut(s)	708
Eco32I	GATATC	1 cut(s)	1949
Eco47I	GGWCC	5 cut(s)	679, 1117, 1217, 1649, 1688
Eco57I	CTGAAG	1 cut(s)	1832
EcoO109I	RGGNCCY	2 cut(s)	881, 1217
EcoRII	CCWGG	2 cut(s)	453, 1970
EcoRV	GATATC	1 cut(s)	1949
EcoT14I	CCWWGG	2 cut(s)	856, 2149
EcoT22I	ATGCAT	2 cut(s)	774, 969
EgeI	GGCGCC	1 cut(s)	2008
EheI	GGCGCC	1 cut(s)	2008
ErhI	CCWWGG	2 cut(s)	856, 2149
Esp3I	CGTCTC	1 cut(s)	1711
FaqI	GGGAC	2 cut(s)	171, 276
FauI	CCCGC	2 cut(s)	359, 823
FauNDI	CATATG	1 cut(s)	1425
FbaI	TGATCA	3 cut(s)	223, 1417, 1671
Fnu4HI	GCNGC	4 cut(s)	1272, 1617, 1700, 2214
FokI	GGATG	5 cut(s)	907, 976, 1252, 1361, 2039
Fsp4HI	GCNGC	4 cut(s)	1272, 1617, 1700, 2214
FspBI	CTAG	4 cut(s)	465, 707, 857, 2097
GlaI	GCGC	3 cut(s)	365, 1743, 2008
GluI	GCNGC	4 cut(s)	1272, 1617, 1700, 2214
GsaI	CCCAGC	2 cut(s)	444, 1260
GsuI	CTGGAG	3 cut(s)	897, 1356, 1893
HaeII	RGCGCY	1 cut(s)	2010
HaeIII	GGCC	4 cut(s)	648, 882, 1309, 2064
HapII	CCGG	8 cut(s)	152, 329, 1275, 1571, 1801, 1990, 2004, 2269
HgaI	GACGC	1 cut(s)	649
HhaI	GCGC	3 cut(s)	366, 1744, 2009
Hin1I	GRCGYC	1 cut(s)	2007
Hin6I	GCGC	3 cut(s)	364, 1742, 2007
HinP1I	GCGC	3 cut(s)	364, 1742, 2007
HincII	GTYRAC	4 cut(s)	612, 923, 1383, 1732
HindII	GTYRAC	4 cut(s)	612, 923, 1383, 1732
HindIII	AAGCTT	2 cut(s)	1553, 2323
HpaI	GTTAAC	1 cut(s)	612
HpaII	CCGG	8 cut(s)	152, 329, 1275, 1571, 1801, 1990, 2004, 2269
HphI	GGTGA	6 cut(s)	318, 406, 498, 522, 1216, 1244
Hpy166II	GTNNAC	8 cut(s)	506, 612, 923, 1285, 1383, 1688, 1732, 2119
Hpy188I	TCNGA	8 cut(s)	492, 748, 764, 799, 1711, 1754, 2074, 2283
Hpy8I	GTNNAC	8 cut(s)	506, 612, 923, 1285, 1383, 1688, 1732, 2119
Hpy99I	CGWCG	1 cut(s)	1862
HpyAV	CCTTC	5 cut(s)	1223, 1771, 1814, 2078, 2079
HpyCH4III	ACNGT	7 cut(s)	110, 384, 609, 1057, 1482, 1537, 1729
HpyCH4IV	ACGT	3 cut(s)	576, 614, 2254
HpyF10VI	GCNNNNNNNGC	4 cut(s)	2116, 2179, 2210, 2269
HpyF3I	CTNAG	8 cut(s)	666, 747, 987, 1300, 1335, 1751, 1768, 2073
HpySE526I	ACGT	3 cut(s)	576, 614, 2254
Hsp92I	GRCGYC	1 cut(s)	2007
HspAI	GCGC	3 cut(s)	364, 1742, 2007
KasI	GGCGCC	1 cut(s)	2006
KroI	GCCGGC	1 cut(s)	2268
KroNI	GCCGGC	1 cut(s)	2270
Ksp22I	TGATCA	3 cut(s)	223, 1417, 1671
KspAI	GTTAAC	1 cut(s)	612
LmnI	GCTCC	8 cut(s)	169, 361, 833, 1375, 1490, 1874, 1935, 2105
Lsp1109I	GCAGC	3 cut(s)	1258, 1628, 1711
LweI	GCATC	6 cut(s)	781, 954, 1186, 1773, 1843, 2097
MaeI	CTAG	4 cut(s)	465, 707, 857, 2097
MaeII	ACGT	3 cut(s)	576, 614, 2254
MaeIII	GTNAC	8 cut(s)	73, 376, 528, 1002, 1232, 1913, 2014, 2255
MfeI	CAATTG	1 cut(s)	1837
MflI	RGATCY	3 cut(s)	457, 898, 1020
MhlI	GDGCHC	2 cut(s)	1487, 2121
Mly113I	GGCGCC	1 cut(s)	2007
MlyI	GAGTC	3 cut(s)	1445, 1957, 2102
MmeI	TCCRAC	1 cut(s)	1913
Mph1103I	ATGCAT	2 cut(s)	774, 969
MroNI	GCCGGC	1 cut(s)	2268
MslI	CAYNNNNRTG	1 cut(s)	71
MspA1I	CMGCKG	1 cut(s)	440
MspI	CCGG	8 cut(s)	152, 329, 1275, 1571, 1801, 1990, 2004, 2269
MspR9I	CCNGG	4 cut(s)	153, 455, 1801, 1972
MunI	CAATTG	1 cut(s)	1837
Mva1269I	GAATGC	1 cut(s)	725
MvaI	CCWGG	2 cut(s)	455, 1972
MvnI	CGCG	1 cut(s)	366
MwoI	GCNNNNNNNGC	4 cut(s)	2116, 2179, 2210, 2269
NaeI	GCCGGC	1 cut(s)	2270
NarI	GGCGCC	1 cut(s)	2007
NciI	CCSGG	2 cut(s)	153, 1801
NcoI	CCATGG	1 cut(s)	2149
NdeI	CATATG	1 cut(s)	1425
NgoMIV	GCCGGC	1 cut(s)	2268
NlaIV	GGNNCC	6 cut(s)	429, 622, 1297, 1539, 1876, 2008
NmeAIII	GCCGAG	1 cut(s)	502
NmuCI	GTSAC	7 cut(s)	73, 376, 528, 1002, 1232, 1913, 2255
NsiI	ATGCAT	2 cut(s)	774, 969
NspI	RCATGY	4 cut(s)	70, 1212, 1406, 2263
NspV	TTCGAA	1 cut(s)	1818
PaeI	GCATGC	1 cut(s)	1406
PciI	ACATGT	1 cut(s)	1208
PctI	GAATGC	1 cut(s)	725
PdiI	GCCGGC	1 cut(s)	2270
PfoI	TCCNGGA	1 cut(s)	453
PkrI	GCNGC	4 cut(s)	1273, 1618, 1701, 2215
PleI	GAGTC	3 cut(s)	1445, 1957, 2101
PluTI	GGCGCC	1 cut(s)	2010
PpsI	GAGTC	3 cut(s)	1445, 1957, 2101
PpuMI	RGGWCCY	1 cut(s)	1217
PscI	ACATGT	1 cut(s)	1208
PshBI	ATTAAT	2 cut(s)	1722, 2237
PsiI	TTATAA	1 cut(s)	203
Psp5II	RGGWCCY	1 cut(s)	1217
Psp6I	CCWGG	2 cut(s)	453, 1970
PspFI	CCCAGC	2 cut(s)	440, 1256
PspGI	CCWGG	2 cut(s)	453, 1970
PspN4I	GGNNCC	6 cut(s)	429, 622, 1297, 1539, 1876, 2008
PspPI	GGNCC	8 cut(s)	679, 881, 1117, 1217, 1307, 1649, 1688, 2062
PspPPI	RGGWCCY	1 cut(s)	1217
PsuI	RGATCY	3 cut(s)	457, 898, 1020
PvuII	CAGCTG	1 cut(s)	440
RsaI	GTAC	2 cut(s)	541, 695
RsaNI	GTAC	2 cut(s)	540, 694
RseI	CAYNNNNRTG	1 cut(s)	71
SatI	GCNGC	4 cut(s)	1272, 1617, 1700, 2214
Sau96I	GGNCC	8 cut(s)	679, 881, 1117, 1217, 1307, 1649, 1688, 2062
SchI	GAGTC	3 cut(s)	1445, 1957, 2102
ScrFI	CCNGG	4 cut(s)	153, 455, 1801, 1972
SduI	GDGCHC	2 cut(s)	1487, 2121
SfaNI	GCATC	6 cut(s)	781, 954, 1186, 1773, 1843, 2097
SfoI	GGCGCC	1 cut(s)	2008
SfuI	TTCGAA	1 cut(s)	1818
SinI	GGWCC	5 cut(s)	679, 1117, 1217, 1649, 1688
SmiMI	CAYNNNNRTG	1 cut(s)	71
SmlI	CTYRAG	2 cut(s)	804, 1562
SmoI	CTYRAG	2 cut(s)	804, 1562
SphI	GCATGC	1 cut(s)	1406
SsiI	CCGC	8 cut(s)	303, 366, 682, 755, 830, 1406, 1944, 2213
SspDI	GGCGCC	1 cut(s)	2006
SspMI	CTAG	4 cut(s)	465, 707, 857, 2097
StyD4I	CCNGG	4 cut(s)	151, 453, 1799, 1970
StyI	CCWWGG	2 cut(s)	856, 2149
TaaI	ACNGT	7 cut(s)	110, 384, 609, 1057, 1482, 1537, 1729
TaiI	ACGT	3 cut(s)	579, 617, 2257
TaqI	TCGA	8 cut(s)	47, 63, 238, 255, 407, 1032, 1818, 2160
TaqII	GACCGA	3 cut(s)	92, 1134, 1705
TauI	GCSGC	1 cut(s)	2216
TscAI	CASTG	2 cut(s)	1380, 2004
TseFI	GTSAC	7 cut(s)	73, 376, 528, 1002, 1232, 1913, 2255
TseI	GCWGC	3 cut(s)	1271, 1616, 1699
Tsp45I	GTSAC	7 cut(s)	73, 376, 528, 1002, 1232, 1913, 2255
TspGWI	ACGGA	2 cut(s)	1361, 2092
TspRI	CASTG	2 cut(s)	1380, 2004
VneI	GTGCAC	1 cut(s)	2117
VpaK11BI	GGWCC	5 cut(s)	679, 1117, 1217, 1649, 1688
VspI	ATTAAT	2 cut(s)	1722, 2237
XapI	RAATTY	4 cut(s)	34, 716, 1028, 1133
XbaI	TCTAGA	1 cut(s)	706
XceI	RCATGY	4 cut(s)	70, 1212, 1406, 2263
XmaJI	CCTAGG	1 cut(s)	856
XspI	CTAG	4 cut(s)	465, 707, 857, 2097
Zsp2I	ATGCAT	2 cut(s)	774, 969

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.