Rorug01G0423700

Dipeptidyl peptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0004088
Physical Location & Seq
Forward (+)
52433368 .. 52435326
1959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0423700.1

Sequence Viewer

Length: 522 bp
ATGTCGATCATGTCTTCTCTTTTCTTCACCCTTCTGTGTTTTTCTTCCATGCATGCAAATTCTGAGGCTCGCTATATTGGACTTGGCCGCAGCCATAAGGGTTTTCTCGCACTGTTCCCTCATTCGGACAAGGGTCAGTTTCTAGTTGTGGAAAAGTTGAGGCTTGGAATAGATTCGAGTACGAAAGGGTCGGTACTAGTTAAGCAGGATGATGATCTAGCTGGTGAGCAGACGGGTAATCATGGTGGAATTGTCAGTAGTAGTAGTAGTACTACTACTACTACTAAAGGGAAATTGGAATACGCAGGAAGTGAGATTTTTGAGTCTTCTAGTTCTACTTCTGCTCACATGGGTTTGCATAAAGATAAAGCAACAACTACTATCACTAAGGAATCAAGAAGGAGAGGGCTATATGCTAAAGAAAGACAGACTAACAAAGTAGAAGATGATGATGATGGTGTGGTGCTTGACGATTATAAGCCACCACATCAGACACCTCCCATTCACAACAAAAGAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04974 map04974
Pfam Domains
Protein Families
DPPIV_N Peptidase_S9

Protein Analysis

173

Amino Acids

18.92

Weight (kDa)

7.9

Isoelectric Point (pI)

57.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 477
AciI CCGC 1 cut(s) 88
AcoI YGGCCR 1 cut(s) 85
AcsI RAATTY 1 cut(s) 58
AfaI GTAC 3 cut(s) 181, 195, 271
AfiI CCNNNNNNNGG 1 cut(s) 124
AhlI ACTAGT 1 cut(s) 196
AluBI AGCT 1 cut(s) 221
AluI AGCT 1 cut(s) 221
AoxI GGCC 1 cut(s) 85
ApeKI GCWGC 1 cut(s) 90
ApoI RAATTY 1 cut(s) 58
Asp700I GAANNNNTTC 1 cut(s) 172
AsuHPI GGTGA 2 cut(s) 19, 236
BbsI GAAGAC 2 cut(s) 6, 318
BbvI GCAGC 1 cut(s) 102
BccI CCATC 1 cut(s) 449
BcuI ACTAGT 1 cut(s) 196
BfaI CTAG 4 cut(s) 143, 197, 218, 330
BisI GCNGC 2 cut(s) 88, 91
BlsI GCNGC 2 cut(s) 89, 92
BmcAI AGTACT 1 cut(s) 271
BoxI GACNNNNGTC 1 cut(s) 132
BpiI GAAGAC 2 cut(s) 6, 318
BsaBI GATNNNNATC 1 cut(s) 213
Bsc4I CCNNNNNNNGG 1 cut(s) 124
Bse8I GATNNNNATC 1 cut(s) 213
BseGI GGATG 1 cut(s) 214
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 1 cut(s) 124
BseMII CTCAG 1 cut(s) 54
BseXI GCAGC 1 cut(s) 102
BshFI GGCC 1 cut(s) 87
BslI CCNNNNNNNGG 1 cut(s) 124
BsnI GGCC 1 cut(s) 87
Bsp143I GATC 2 cut(s) 6, 214
BspACI CCGC 1 cut(s) 88
BspANI GGCC 1 cut(s) 87
BspCNI CTCAG 1 cut(s) 55
BssMI GATC 2 cut(s) 6, 214
Bst4CI ACNGT 1 cut(s) 114
BstC8I GCNNGC 2 cut(s) 54, 70
BstDEI CTNAG 2 cut(s) 63, 387
BstF5I GGATG 1 cut(s) 214
BstKTI GATC 2 cut(s) 9, 217
BstMBI GATC 2 cut(s) 6, 214
BstNSI RCATGY 1 cut(s) 56
BstPAI GACNNNNGTC 1 cut(s) 132
BstV1I GCAGC 1 cut(s) 102
BstV2I GAAGAC 2 cut(s) 6, 318
BsuRI GGCC 1 cut(s) 87
BtsCI GGATG 1 cut(s) 214
BtsIMutI CAGTG 1 cut(s) 110
Cac8I GCNNGC 2 cut(s) 54, 70
Csp6I GTAC 3 cut(s) 180, 194, 270
CviAII CATG 5 cut(s) 10, 49, 53, 242, 349
CviJI RGCY 7 cut(s) 68, 87, 93, 163, 221, 409, 481
CviKI_1 RGCY 7 cut(s) 68, 87, 93, 163, 221, 409, 481
CviQI GTAC 3 cut(s) 180, 194, 270
DdeI CTNAG 2 cut(s) 63, 387
DpnI GATC 2 cut(s) 8, 216
DpnII GATC 2 cut(s) 6, 214
EaeI YGGCCR 1 cut(s) 85
EcoT22I ATGCAT 1 cut(s) 54
FaeI CATG 5 cut(s) 13, 52, 56, 245, 352
FatI CATG 5 cut(s) 9, 48, 52, 241, 348
Fnu4HI GCNGC 2 cut(s) 88, 91
FokI GGATG 1 cut(s) 221
Fsp4HI GCNGC 2 cut(s) 88, 91
FspBI CTAG 4 cut(s) 143, 197, 218, 330
GluI GCNGC 2 cut(s) 88, 91
HaeIII GGCC 1 cut(s) 87
Hin1II CATG 5 cut(s) 13, 52, 56, 245, 352
HinfI GANTC 3 cut(s) 173, 323, 392
HphI GGTGA 2 cut(s) 19, 236
Hpy188I TCNGA 3 cut(s) 64, 127, 492
Hpy188III TCNNGA 1 cut(s) 396
HpyAV CCTTC 2 cut(s) 41, 393
HpyCH4III ACNGT 1 cut(s) 114
HpyCH4V TGCA 3 cut(s) 52, 56, 358
HpyF3I CTNAG 2 cut(s) 63, 387
Hsp92II CATG 5 cut(s) 13, 52, 56, 245, 352
Kzo9I GATC 2 cut(s) 6, 214
LpnPI CCDG 3 cut(s) 191, 207, 291
Lsp1109I GCAGC 1 cut(s) 102
MaeI CTAG 4 cut(s) 143, 197, 218, 330
MalI GATC 2 cut(s) 8, 216
MboI GATC 2 cut(s) 6, 214
MboII GAAGA 5 cut(s) 6, 16, 36, 318, 455
MluCI AATT 3 cut(s) 58, 249, 293
MlyI GAGTC 1 cut(s) 332
MnlI CCTC 5 cut(s) 58, 129, 153, 398, 507
Mph1103I ATGCAT 1 cut(s) 54
MroXI GAANNNNTTC 1 cut(s) 172
MseI TTAA 1 cut(s) 201
NdeII GATC 2 cut(s) 6, 214
NlaIII CATG 5 cut(s) 13, 52, 56, 245, 352
NsiI ATGCAT 1 cut(s) 54
NspI RCATGY 1 cut(s) 56
PaeI GCATGC 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 172
PfeI GAWTC 2 cut(s) 173, 392
PkrI GCNGC 2 cut(s) 89, 92
PleI GAGTC 1 cut(s) 331
PpsI GAGTC 1 cut(s) 331
PshAI GACNNNNGTC 1 cut(s) 132
PsiI TTATAA 1 cut(s) 477
RsaI GTAC 3 cut(s) 181, 195, 271
RsaNI GTAC 3 cut(s) 180, 194, 270
SaqAI TTAA 1 cut(s) 201
SatI GCNGC 2 cut(s) 88, 91
Sau3AI GATC 2 cut(s) 6, 214
ScaI AGTACT 1 cut(s) 271
SchI GAGTC 1 cut(s) 332
SetI ASST 2 cut(s) 223, 499
SpeI ACTAGT 1 cut(s) 196
SphI GCATGC 1 cut(s) 56
Sse9I AATT 3 cut(s) 58, 249, 293
SsiI CCGC 1 cut(s) 88
SspMI CTAG 4 cut(s) 143, 197, 218, 330
TaaI ACNGT 1 cut(s) 114
TaqI TCGA 2 cut(s) 5, 176
TasI AATT 3 cut(s) 58, 249, 293
TatI WGTACW 1 cut(s) 269
TauI GCSGC 1 cut(s) 90
TfiI GAWTC 2 cut(s) 173, 392
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TscAI CASTG 1 cut(s) 117
TseI GCWGC 1 cut(s) 90
TspRI CASTG 1 cut(s) 117
XapI RAATTY 1 cut(s) 58
XceI RCATGY 1 cut(s) 56
XmnI GAANNNNTTC 1 cut(s) 172
XspI CTAG 4 cut(s) 143, 197, 218, 330
ZrmI AGTACT 1 cut(s) 271
Zsp2I ATGCAT 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.