Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0004088

Physical Location & Seq

Genomic Coordinates Forward (+)

66519853 .. 66523031

Gene Structure 3179 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G038980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGCAATCAGCTGAGAACAATAAGAAGAAGAAATTGAAGTTAAGTTGCGAAATGCCGGCCACGGACGCTAATTTTTCACAGAAACTGGATGACTGTATTGTGTTTCCTATTGAGGAGATTGTGCAGCAGCCTCTGCCTGGATGTGTTGCTCCTGCATCGATTAGTTTTAGCGGTGATGATAGCATTGTGACGTATCTGTTTAGTCCTGATCAGAGTTTGAATAGGAAGGTGTTTAAATTTGACCTCAAGAGTTGTGTGGAAGAGCTGTGTTTCAGTCCTCCCGATGGGGGGCTTGATGAGAGCAATATATCGGCGGAGGAGAAGTTGAGGAGGGAGAGGTTGAGGGAGCGCGGGTTGGGAGTGACAAGGTATGAGTGGGTGAAGACAAGCTCGGTTAAGAAAGCAATCATGGTGCCATTGCCTGCTGGGATTTATTTCCAGGATCTTTCCTGTTCAGAACCGGAGCTCAAGATTCCAAGCACACCGTCTTCACCAATTATTGATCCCCATCTGTCCCCAGATGGTACAATGCTTGGTTATGTAAAAGACAGCGAGTTGCATGTTCTAAATTTGTTGTACAATGAATCAAAACAGCTTACATCTGGTGCGAGAGGAGGTGTTTTGACTCATGGCCTTGCTGAATATATAGCGCAGGAAGAAATGGACCGCAAGAATGGATACTGGTGGTCTCTAGACAGCAAATTCATTGCATTCACAGAAGTTGATTCCTCTGAGGTTCCTCTCTTCAGAATCATGCATCAAGGTAAAAGTTCTGTTGGTTTGGAAGCTCAAGAAGATCACCCTTATCCCTTTGCGGGAGCTTCAAATGTCAAAGTTTGCCTCGGAGTAGTTTCCTCTGCTGGAGGTCCTGTTACTTGGATGGAGCTTCTCTGTGGGGGTACAGATCAACCAGACAATGAGGAGGAATATCTGGCAAGAGTAAATTGGATGCATGGAAATGTTCTAATAGCTCAGGTTTTGAACAGGTCGCACAGCAGACTAAAGATCCTTAAGTTTGACATTAAAAATGGGAAGAGAAAGGTTCTATTGGTAGAAGAGCAACGCAAATGGATCAACTTACATGACTGTTTTACGCCTCTAGACAAAGGACTAACCAAATTTTCTGGGGGATTTATCTGGGCAAGTGAGAAATCAGGATTCAAACATCTTTACCTGCATGATGCCAATGGGACATGCTTAGGTCCTATCACTGAAGGAGAATGGATGGTCGAGCAAATTGCTGGTGTAAATGAAGCTGCTGGTCTTGTTTATTTCACTGGAACTTTGGATGGGCCTTTAGAATCACACCTTTATTGTACTAAACTATTCACAGATGGAAGCCAAACCTTGGAAGCTCCAGTGAAGTTGACTCGCAACAAGGGGAGGCATGTCGTCGTGCTTGATCATCATATGAGGAATTTTGTAGATATCCATGACTCCCTAGATTTTCCTCCCAAGGTTTTACTCTGCTCCTTGCACAATGGCAGCATTATTATGCCTTTATATGAGCAGCCATTCACAATTCCAAGATTCAAAAGGCTTCAACTTGAGCCACCAGAGTTGGTTCATTTACAGGCTAATGATGGGTCAACGTTGTATGGAGCTCTATACAAGCCTGATGCAGCCAAATTTGGACCTCCACCTTATAAAACGATGATCTACGTGTATGGTGGACCATGCGTCCAGCTTATTTCTGATTCTTGGATAAGTACAGTTGACATGAGAGCACAGTTTCTAAGAAGCAAAGGCATCTTAGTATGGAAGTTGGATAACAGAGGAACTGCTCGACGCGGACTGAAGTTTGAAGGCTCTTTAAAACACAATGCTGGTCGTGTTGATGCTGACGATCAACTGACTGGGGCCCAGTGGCTTATAGACCAAGGGCTAGCAGAAGCAGGTCACATTGGATTGTATGGTTGGAGCTATGGTGGGTATCTTTCAGCGATGACTTTGGCCAGGTATCCTGATGTGTTCCGATGTGCAGTGTCCGGTGCCCCCGTTACAGCGTGGGATGGGTATGACACATTCTATACTGAGAAATATATGGGACTTCCTTCTGAGAATGAAGAGAGTTACAAGTATAGCTCATTGATGCACCATGTGCACAAGATGAAAGGAAAATTGTTACTCGTGCACGGAATGATTGATGAAAATGTGCATTTTAGACACACTGCCAGGCTTGTCAATGCACTTATTGCAGCTAGGAAGACTTACGAACTGTTAATTTTCCCGGATGAACGGCACATGCCACGGCAGCTTAGTGATCGGGTTTATATGGAAGAAAGAATTTGGGAATTCATAGAAAGAAACCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04974 map04974

Pfam Domains

Protein Families

DPPIV_N Peptidase_S9

Protein Analysis

771

Amino Acids

86.74

Weight (kDa)

6.13

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DPPIV_N	PF00930	134 - 485	1.5e-78	Dipeptidyl peptidase IV (DPP IV) N-terminal region
Peptidase_S9	PF00326	572 - 771	5.7e-55	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24260 AT5G24260 AT5G24260 AT5G24260 AT5G24260
fragaria_vesca	FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630 FvH4_7g31630
malus_domestica	MD07G1288900.v1.1
prunus_persica	Prupe.2G310400_v2.0.a1 Prupe.2G310400_v2.0.a1 Prupe.2G310400_v2.0.a1
pyrus_communis	pycom01g22900 pycom07g26150 pycom07g26160
rosa_chinensis	RchiOBHm_Chr1g0380701
rosa_laevigata	RLG00000026277
rosa_multiflora	Rmu_co8317175.1_g000001 Rmu_co8479769.1_g000001 Rmu_sc0001637.1_g000009
rosa_roxburghii	Rroxscaffold_4G00279100
rosa_rugosa	Rorug01G0423600 Rorug01G0423700 Rorug01G0423700
rosa_samantha	Rh1AG447900 Rh1BG403300 Rh1CG417500 Rh1DG433600
rosa_wichuraiana	Rw0G005860 Rw1G038980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1647
Acc36I	ACCTGC	2 cut(s)	1182, 1886
AccB1I	GGYRCC	2 cut(s)	412, 1991
AccB7I	CCANNNNNTGG	1 cut(s)	1348
AccII	CGCG	2 cut(s)	351, 1791
AciI	CCGC	6 cut(s)	171, 314, 351, 667, 815, 1791
AclI	AACGTT	1 cut(s)	1592
AclWI	GGATC	4 cut(s)	450, 497, 1000, 1079
AcoI	YGGCCR	2 cut(s)	57, 1953
AcsI	RAATTY	8 cut(s)	236, 568, 701, 1118, 1417, 1628, 2286, 2294
AcuI	CTGAAG	3 cut(s)	730, 1233, 1817
AdeI	CACNNNGTG	1 cut(s)	2101
AfaI	GTAC	5 cut(s)	526, 578, 901, 1318, 1711
AfiI	CCNNNNNNNGG	6 cut(s)	137, 284, 287, 288, 815, 1348
AflII	CTTAAG	1 cut(s)	1010
AflIII	ACRYGT	1 cut(s)	1662
AgsI	TTSAA	8 cut(s)	37, 220, 825, 982, 1162, 1534, 1544, 1805
AhdI	GACNNNNNGTC	1 cut(s)	1679
AjnI	CCWGG	4 cut(s)	136, 438, 1955, 2174
Alw21I	GWGCWC	5 cut(s)	468, 1606, 1729, 2106, 2136
Alw26I	GTCTC	1 cut(s)	693
Alw44I	GTGCAC	2 cut(s)	2102, 2132
AlwI	GGATC	4 cut(s)	450, 497, 1000, 1079
AlwNI	CAGNNNCTG	2 cut(s)	85, 133
AoxI	GGCC	5 cut(s)	57, 631, 1292, 1860, 1953
ApaI	GGGCCC	1 cut(s)	1864
ApaLI	GTGCAC	2 cut(s)	2102, 2132
ApeKI	GCWGC	8 cut(s)	124, 127, 1256, 1485, 1510, 1622, 2198, 2254
ApoI	RAATTY	8 cut(s)	236, 568, 701, 1118, 1417, 1628, 2286, 2294
AspLEI	GCGC	2 cut(s)	351, 652
AspS9I	GGNCC	8 cut(s)	664, 866, 1202, 1292, 1634, 1673, 1860, 1861
AsuC2I	CCSGG	1 cut(s)	2231
AsuHPI	GGTGA	4 cut(s)	185, 391, 483, 791
AsuNHI	GCTAGC	1 cut(s)	1885
AvaII	GGWCC	5 cut(s)	664, 866, 1202, 1634, 1673
BaeGI	GKGCMC	4 cut(s)	1864, 1996, 2106, 2136
BalI	TGGCCA	1 cut(s)	1955
BanI	GGYRCC	2 cut(s)	412, 1991
BanII	GRGCYC	3 cut(s)	468, 1606, 1864
BauI	CACGAG	1 cut(s)	2129
BbsI	GAAGAC	3 cut(s)	389, 480, 2213
Bbv12I	GWGCWC	5 cut(s)	468, 1606, 1729, 2106, 2136
BbvI	GCAGC	8 cut(s)	136, 139, 1243, 1497, 1522, 1634, 2210, 2266
BccI	CCATC	9 cut(s)	278, 515, 516, 874, 1219, 1283, 1328, 1577, 2006
BceAI	ACGGC	2 cut(s)	2255, 2267
BcgI	CGANNNNNNTGC	2 cut(s)	1220, 1254
BciT130I	CCWGG	4 cut(s)	138, 440, 1957, 2176
BciVI	GTATCC	2 cut(s)	671, 1971
BclI	TGATCA	2 cut(s)	208, 1402
BcnI	CCSGG	1 cut(s)	2231
BcoDI	GTCTC	1 cut(s)	693
BfaI	CTAG	5 cut(s)	692, 1100, 1442, 1886, 2202
BfrI	CTTAAG	1 cut(s)	1010
BfuAI	ACCTGC	2 cut(s)	1182, 1886
BfuI	GTATCC	2 cut(s)	671, 1971
BisI	GCNGC	8 cut(s)	125, 128, 1257, 1486, 1511, 1623, 2199, 2255
BlsI	GCNGC	8 cut(s)	126, 129, 1258, 1487, 1512, 1624, 2200, 2256
Bme1390I	CCNGG	5 cut(s)	138, 440, 1957, 2176, 2231
Bme18I	GGWCC	5 cut(s)	664, 866, 1202, 1634, 1673
BmeRI	GACNNNNNGTC	1 cut(s)	1679
BmgT120I	GGNCC	8 cut(s)	664, 866, 1202, 1292, 1634, 1673, 1860, 1861
BmiI	GGNNCC	5 cut(s)	414, 738, 1861, 1862, 1993
BmrFI	CCNGG	5 cut(s)	138, 440, 1957, 2176, 2231
BmrI	ACTGGG	2 cut(s)	1858, 1866
BmsI	GCATC	8 cut(s)	164, 766, 939, 1171, 1609, 1758, 1828, 2082
BmtI	GCTAGC	1 cut(s)	1889
BmuI	ACTGGG	2 cut(s)	1858, 1866
BpiI	GAAGAC	3 cut(s)	389, 480, 2213
BpmI	CTGGAG	2 cut(s)	882, 1341
Bpu10I	CCTNAGC	2 cut(s)	972, 1198
BpuEI	CTTGAG	4 cut(s)	230, 452, 774, 1568
BpuMI	CCSGG	1 cut(s)	2231
Bsa29I	ATCGAT	1 cut(s)	158
BsaAI	YACGTR	1 cut(s)	1663
BsaBI	GATNNNNATC	1 cut(s)	507
BsaI	GGTCTC	1 cut(s)	693
BsaJI	CCNNGG	6 cut(s)	60, 841, 1347, 1455, 1879, 2249
BsaWI	WCCGGW	2 cut(s)	460, 1988
BsaXI	ACNNNNNCTCC	8 cut(s)	308, 338, 338, 368, 855, 885, 1912, 1942
Bsc4I	CCNNNNNNNGG	6 cut(s)	137, 284, 287, 288, 815, 1348
Bse118I	RCCGGY	1 cut(s)	55
Bse1I	ACTGG	6 cut(s)	90, 686, 1282, 1358, 1861, 1864
Bse3DI	GCAATG	2 cut(s)	416, 705
Bse8I	GATNNNNATC	1 cut(s)	507
BseBI	CCWGG	4 cut(s)	138, 440, 1957, 2176
BseCI	ATCGAT	1 cut(s)	158
BseDI	CCNNGG	6 cut(s)	60, 841, 1347, 1455, 1879, 2249
BseGI	GGATG	8 cut(s)	94, 146, 885, 954, 1230, 1294, 2017, 2239
BseJI	GATNNNNATC	1 cut(s)	507
BseLI	CCNNNNNNNGG	6 cut(s)	137, 284, 287, 288, 815, 1348
BseMI	GCAATG	2 cut(s)	416, 705
BseMII	CTCAG	4 cut(s)	723, 986, 2025, 2049
BseNI	ACTGG	6 cut(s)	90, 686, 1282, 1358, 1861, 1864
BseRI	GAGGAG	5 cut(s)	128, 332, 343, 627, 935
BseSI	GKGCMC	4 cut(s)	1864, 1996, 2106, 2136
BseXI	GCAGC	8 cut(s)	136, 139, 1243, 1497, 1522, 1634, 2210, 2266
BseYI	CCCAGC	1 cut(s)	425
BsgI	GTGCAG	2 cut(s)	143, 2001
Bsh1236I	CGCG	2 cut(s)	351, 1791
BshFI	GGCC	5 cut(s)	59, 633, 1294, 1862, 1955
BshNI	GGYRCC	2 cut(s)	412, 1991
BshVI	ATCGAT	1 cut(s)	158
BsiHKAI	GWGCWC	5 cut(s)	468, 1606, 1729, 2106, 2136
BsiSI	CCGG	4 cut(s)	56, 461, 1989, 2231
BslFI	GGGAC	3 cut(s)	499, 1204, 2061
BslI	CCNNNNNNNGG	6 cut(s)	137, 284, 287, 288, 815, 1348
BsmAI	GTCTC	1 cut(s)	693
BsmFI	GGGAC	3 cut(s)	499, 1204, 2061
BsmI	GAATGC	1 cut(s)	710
BsnI	GGCC	5 cut(s)	59, 633, 1294, 1862, 1955
Bso31I	GGTCTC	1 cut(s)	693
Bsp120I	GGGCCC	1 cut(s)	1860
Bsp1286I	GDGCHC	7 cut(s)	468, 1606, 1729, 1864, 1996, 2106, 2136
Bsp1407I	TGTACA	1 cut(s)	576
BspACI	CCGC	6 cut(s)	171, 314, 351, 667, 815, 1791
BspANI	GGCC	5 cut(s)	59, 633, 1294, 1862, 1955
BspCNI	CTCAG	5 cut(s)	4, 724, 985, 2026, 2050
BspDI	ATCGAT	1 cut(s)	158
BspFNI	CGCG	2 cut(s)	351, 1791
BspLI	GGNNCC	5 cut(s)	414, 738, 1861, 1862, 1993
BspMI	ACCTGC	2 cut(s)	1182, 1886
BspOI	GCTAGC	1 cut(s)	1889
BspPI	GGATC	4 cut(s)	450, 497, 1000, 1079
BspQI	GCTCTTC	2 cut(s)	255, 1050
BspT107I	GGYRCC	2 cut(s)	412, 1991
BspTI	CTTAAG	1 cut(s)	1010
BspTNI	GGTCTC	1 cut(s)	693
BsrDI	GCAATG	2 cut(s)	416, 705
BsrFI	RCCGGY	1 cut(s)	55
BsrGI	TGTACA	1 cut(s)	576
BsrI	ACTGG	6 cut(s)	90, 686, 1282, 1358, 1861, 1864
BssAI	RCCGGY	1 cut(s)	55
BssECI	CCNNGG	6 cut(s)	60, 841, 1347, 1455, 1879, 2249
BssSI	CACGAG	1 cut(s)	2129
BssT1I	CCWWGG	3 cut(s)	1347, 1455, 1879
Bst2BI	CACGAG	1 cut(s)	2129
Bst2UI	CCWGG	4 cut(s)	138, 440, 1957, 2176
Bst4CI	ACNGT	6 cut(s)	95, 486, 1088, 1714, 1731, 2220
Bst6I	CTCTTC	5 cut(s)	255, 749, 1028, 1050, 2061
BstAFI	CTTAAG	1 cut(s)	1010
BstAPI	GCANNNNNTGC	3 cut(s)	133, 2101, 2195
BstAUI	TGTACA	1 cut(s)	576
BstBAI	YACGTR	1 cut(s)	1663
BstC8I	GCNNGC	3 cut(s)	57, 423, 1887
BstDEI	CTNAG	9 cut(s)	12, 732, 972, 1198, 1736, 1753, 2034, 2058, 2258
BstDSI	CCRYGG	2 cut(s)	60, 2249
BstF5I	GGATG	8 cut(s)	94, 146, 885, 954, 1230, 1294, 2017, 2239
BstFNI	CGCG	2 cut(s)	351, 1791
BstHHI	GCGC	2 cut(s)	351, 652
BstMAI	GTCTC	1 cut(s)	693
BstMWI	GCNNNNNNNGC	5 cut(s)	65, 133, 2101, 2195, 2254
BstNI	CCWGG	4 cut(s)	138, 440, 1957, 2176
BstNSI	RCATGY	4 cut(s)	563, 1197, 1391, 2248
BstSCI	CCNGG	5 cut(s)	136, 438, 1955, 2174, 2229
BstSLI	GKGCMC	4 cut(s)	1864, 1996, 2106, 2136
BstUI	CGCG	2 cut(s)	351, 1791
BstV1I	GCAGC	8 cut(s)	136, 139, 1243, 1497, 1522, 1634, 2210, 2266
BstV2I	GAAGAC	3 cut(s)	389, 480, 2213
BstX2I	RGATCY	2 cut(s)	442, 1005
BstYI	RGATCY	2 cut(s)	442, 1005
Bsu15I	ATCGAT	1 cut(s)	158
BsuI	GTATCC	2 cut(s)	671, 1971
BsuRI	GGCC	5 cut(s)	59, 633, 1294, 1862, 1955
BsuTUI	ATCGAT	1 cut(s)	158
BtgI	CCRYGG	2 cut(s)	60, 2249
BtgZI	GCGATG	1 cut(s)	1958
BtsCI	GGATG	8 cut(s)	94, 146, 885, 954, 1230, 1294, 2017, 2239
BtsI	GCAGTG	2 cut(s)	1989, 2169
BtsIMutI	CAGTG	6 cut(s)	1209, 1275, 1365, 1871, 1989, 2169
BveI	ACCTGC	2 cut(s)	1182, 1886
Cac8I	GCNNGC	3 cut(s)	57, 423, 1887
CaiI	CAGNNNCTG	2 cut(s)	85, 133
CfoI	GCGC	2 cut(s)	351, 652
Cfr10I	RCCGGY	1 cut(s)	55
Cfr13I	GGNCC	8 cut(s)	664, 866, 1202, 1292, 1634, 1673, 1860, 1861
ClaI	ATCGAT	1 cut(s)	158
CseI	GACGC	3 cut(s)	74, 1669, 1797
Csp6I	GTAC	5 cut(s)	525, 577, 900, 1317, 1710
CspCI	CAANNNNNGTGG	2 cut(s)	1542, 1577
CviQI	GTAC	5 cut(s)	525, 577, 900, 1317, 1710
DdeI	CTNAG	9 cut(s)	12, 732, 972, 1198, 1736, 1753, 2034, 2058, 2258
DraI	TTTAAA	2 cut(s)	235, 1815
DraIII	CACNNNGTG	1 cut(s)	2101
DriI	GACNNNNNGTC	1 cut(s)	1679
EaeI	YGGCCR	2 cut(s)	57, 1953
Eam1104I	CTCTTC	5 cut(s)	255, 749, 1028, 1050, 2061
Eam1105I	GACNNNNNGTC	1 cut(s)	1679
EarI	CTCTTC	5 cut(s)	255, 749, 1028, 1050, 2061
EciI	GGCGGA	1 cut(s)	329
Ecl136II	GAGCTC	2 cut(s)	466, 1604
Eco130I	CCWWGG	3 cut(s)	1347, 1455, 1879
Eco24I	GRGCYC	3 cut(s)	468, 1606, 1864
Eco31I	GGTCTC	1 cut(s)	693
Eco32I	GATATC	1 cut(s)	1429
Eco47I	GGWCC	5 cut(s)	664, 866, 1202, 1634, 1673
Eco53kI	GAGCTC	2 cut(s)	466, 1604
Eco57I	CTGAAG	3 cut(s)	730, 1233, 1817
EcoICRI	GAGCTC	2 cut(s)	466, 1604
EcoO109I	RGGNCCY	3 cut(s)	866, 1202, 1860
EcoRI	GAATTC	1 cut(s)	2294
EcoRII	CCWGG	4 cut(s)	136, 438, 1955, 2174
EcoRV	GATATC	1 cut(s)	1429
EcoT14I	CCWWGG	3 cut(s)	1347, 1455, 1879
EcoT22I	ATGCAT	2 cut(s)	759, 954
EcoT38I	GRGCYC	3 cut(s)	468, 1606, 1864
ErhI	CCWWGG	3 cut(s)	1347, 1455, 1879
FaqI	GGGAC	3 cut(s)	499, 1204, 2061
FauI	CCCGC	2 cut(s)	344, 808
FauNDI	CATATG	1 cut(s)	1410
FbaI	TGATCA	2 cut(s)	208, 1402
Fnu4HI	GCNGC	8 cut(s)	125, 128, 1257, 1486, 1511, 1623, 2199, 2255
FokI	GGATG	8 cut(s)	101, 153, 892, 961, 1237, 1301, 2024, 2246
FriOI	GRGCYC	3 cut(s)	468, 1606, 1864
Fsp4HI	GCNGC	8 cut(s)	125, 128, 1257, 1486, 1511, 1623, 2199, 2255
FspBI	CTAG	5 cut(s)	692, 1100, 1442, 1886, 2202
GlaI	GCGC	2 cut(s)	350, 651
GluI	GCNGC	8 cut(s)	125, 128, 1257, 1486, 1511, 1623, 2199, 2255
GsaI	CCCAGC	1 cut(s)	429
GsuI	CTGGAG	2 cut(s)	882, 1341
HaeIII	GGCC	5 cut(s)	59, 633, 1294, 1862, 1955
HapII	CCGG	4 cut(s)	56, 461, 1989, 2231
HgaI	GACGC	3 cut(s)	74, 1669, 1797
HhaI	GCGC	2 cut(s)	351, 652
Hin6I	GCGC	2 cut(s)	349, 650
HinP1I	GCGC	2 cut(s)	349, 650
HincII	GTYRAC	3 cut(s)	1368, 1590, 1717
HindII	GTYRAC	3 cut(s)	1368, 1590, 1717
HpaII	CCGG	4 cut(s)	56, 461, 1989, 2231
HphI	GGTGA	4 cut(s)	185, 391, 483, 791
Hpy166II	GTNNAC	6 cut(s)	1368, 1590, 1673, 1717, 2104, 2134
Hpy188I	TCNGA	8 cut(s)	213, 457, 733, 749, 845, 1696, 1976, 2059
Hpy188III	TCNNGA	9 cut(s)	206, 247, 281, 469, 692, 791, 1100, 1155, 1964
Hpy8I	GTNNAC	6 cut(s)	1368, 1590, 1673, 1717, 2104, 2134
Hpy99I	CGWCG	2 cut(s)	1397, 1791
HpyAV	CCTTC	4 cut(s)	220, 1208, 1799, 2064
HpyCH4III	ACNGT	6 cut(s)	95, 486, 1088, 1714, 1731, 2220
HpyCH4IV	ACGT	3 cut(s)	191, 1592, 1662
HpyF10VI	GCNNNNNNNGC	5 cut(s)	65, 133, 2101, 2195, 2254
HpyF3I	CTNAG	9 cut(s)	12, 732, 972, 1198, 1736, 1753, 2034, 2058, 2258
HpySE526I	ACGT	3 cut(s)	191, 1592, 1662
HspAI	GCGC	2 cut(s)	349, 650
KroI	GCCGGC	1 cut(s)	55
KroNI	GCCGGC	1 cut(s)	57
Ksp22I	TGATCA	2 cut(s)	208, 1402
LguI	GCTCTTC	2 cut(s)	255, 1050
LmnI	GCTCC	9 cut(s)	154, 346, 463, 818, 883, 1360, 1475, 1601, 1920
Lsp1109I	GCAGC	8 cut(s)	136, 139, 1243, 1497, 1522, 1634, 2210, 2266
LweI	GCATC	8 cut(s)	164, 766, 939, 1171, 1609, 1758, 1828, 2082
MaeI	CTAG	5 cut(s)	692, 1100, 1442, 1886, 2202
MaeII	ACGT	3 cut(s)	191, 1592, 1662
MaeIII	GTNAC	7 cut(s)	187, 361, 871, 1898, 1999, 2072, 2124
MflI	RGATCY	2 cut(s)	442, 1005
MhlI	GDGCHC	7 cut(s)	468, 1606, 1729, 1864, 1996, 2106, 2136
MlsI	TGGCCA	1 cut(s)	1955
MluNI	TGGCCA	1 cut(s)	1955
MlyI	GAGTC	3 cut(s)	619, 1363, 1430
MmeI	TCCRAC	2 cut(s)	1746, 1898
Mox20I	TGGCCA	1 cut(s)	1955
Mph1103I	ATGCAT	2 cut(s)	759, 954
MroNI	GCCGGC	1 cut(s)	55
MscI	TGGCCA	1 cut(s)	1955
MseI	TTAA	7 cut(s)	41, 234, 396, 1011, 1023, 1814, 2222
MslI	CAYNNNNRTG	2 cut(s)	957, 1493
Msp20I	TGGCCA	1 cut(s)	1955
MspA1I	CMGCKG	1 cut(s)	11
MspCI	CTTAAG	1 cut(s)	1010
MspI	CCGG	4 cut(s)	56, 461, 1989, 2231
MspR9I	CCNGG	5 cut(s)	138, 440, 1957, 2176, 2231
Mva1269I	GAATGC	1 cut(s)	710
MvaI	CCWGG	4 cut(s)	138, 440, 1957, 2176
MvnI	CGCG	2 cut(s)	351, 1791
MwoI	GCNNNNNNNGC	5 cut(s)	65, 133, 2101, 2195, 2254
NaeI	GCCGGC	1 cut(s)	57
NciI	CCSGG	1 cut(s)	2231
NdeI	CATATG	1 cut(s)	1410
NgoMIV	GCCGGC	1 cut(s)	55
NheI	GCTAGC	1 cut(s)	1885
NlaIV	GGNNCC	5 cut(s)	414, 738, 1861, 1862, 1993
NmuCI	GTSAC	3 cut(s)	187, 361, 1898
NsiI	ATGCAT	2 cut(s)	759, 954
NspI	RCATGY	4 cut(s)	563, 1197, 1391, 2248
PciSI	GCTCTTC	2 cut(s)	255, 1050
PctI	GAATGC	1 cut(s)	710
PdiI	GCCGGC	1 cut(s)	57
PfeI	GAWTC	8 cut(s)	472, 584, 725, 750, 1158, 1301, 1530, 1697
PflMI	CCANNNNNTGG	1 cut(s)	1348
PfoI	TCCNGGA	2 cut(s)	438, 2229
PkrI	GCNGC	8 cut(s)	126, 129, 1258, 1487, 1512, 1624, 2200, 2256
PleI	GAGTC	3 cut(s)	619, 1363, 1430
PpsI	GAGTC	3 cut(s)	619, 1363, 1430
Ppu21I	YACGTR	1 cut(s)	1663
PpuMI	RGGWCCY	2 cut(s)	866, 1202
PsiI	TTATAA	1 cut(s)	1647
Psp124BI	GAGCTC	2 cut(s)	468, 1606
Psp1406I	AACGTT	1 cut(s)	1592
Psp5II	RGGWCCY	2 cut(s)	866, 1202
Psp6I	CCWGG	4 cut(s)	136, 438, 1955, 2174
PspFI	CCCAGC	1 cut(s)	425
PspGI	CCWGG	4 cut(s)	136, 438, 1955, 2174
PspN4I	GGNNCC	5 cut(s)	414, 738, 1861, 1862, 1993
PspOMI	GGGCCC	1 cut(s)	1860
PspPI	GGNCC	8 cut(s)	664, 866, 1202, 1292, 1634, 1673, 1860, 1861
PspPPI	RGGWCCY	2 cut(s)	866, 1202
PstNI	CAGNNNCTG	2 cut(s)	85, 133
PsuI	RGATCY	2 cut(s)	442, 1005
PvuII	CAGCTG	1 cut(s)	11
RsaI	GTAC	5 cut(s)	526, 578, 901, 1318, 1711
RsaNI	GTAC	5 cut(s)	525, 577, 900, 1317, 1710
RseI	CAYNNNNRTG	2 cut(s)	957, 1493
SacI	GAGCTC	2 cut(s)	468, 1606
SapI	GCTCTTC	2 cut(s)	255, 1050
SaqAI	TTAA	7 cut(s)	41, 234, 396, 1011, 1023, 1814, 2222
SatI	GCNGC	8 cut(s)	125, 128, 1257, 1486, 1511, 1623, 2199, 2255
Sau96I	GGNCC	8 cut(s)	664, 866, 1202, 1292, 1634, 1673, 1860, 1861
SchI	GAGTC	3 cut(s)	619, 1363, 1430
ScrFI	CCNGG	5 cut(s)	138, 440, 1957, 2176, 2231
SduI	GDGCHC	7 cut(s)	468, 1606, 1729, 1864, 1996, 2106, 2136
SfaNI	GCATC	8 cut(s)	164, 766, 939, 1171, 1609, 1758, 1828, 2082
SinI	GGWCC	5 cut(s)	664, 866, 1202, 1634, 1673
SmiMI	CAYNNNNRTG	2 cut(s)	957, 1493
SmlI	CTYRAG	5 cut(s)	245, 467, 789, 1010, 1547
SmoI	CTYRAG	5 cut(s)	245, 467, 789, 1010, 1547
SsiI	CCGC	6 cut(s)	171, 314, 351, 667, 815, 1791
SspMI	CTAG	5 cut(s)	692, 1100, 1442, 1886, 2202
SstI	GAGCTC	2 cut(s)	468, 1606
StyD4I	CCNGG	5 cut(s)	136, 438, 1955, 2174, 2229
StyI	CCWWGG	3 cut(s)	1347, 1455, 1879
TaaI	ACNGT	6 cut(s)	95, 486, 1088, 1714, 1731, 2220
TaiI	ACGT	3 cut(s)	194, 1595, 1665
TaqI	TCGA	3 cut(s)	158, 1230, 1786
TatI	WGTACW	3 cut(s)	576, 1316, 1709
TfiI	GAWTC	8 cut(s)	472, 584, 725, 750, 1158, 1301, 1530, 1697
Tru1I	TTAA	7 cut(s)	41, 234, 396, 1011, 1023, 1814, 2222
Tru9I	TTAA	7 cut(s)	41, 234, 396, 1011, 1023, 1814, 2222
TscAI	CASTG	6 cut(s)	1216, 1282, 1365, 1871, 1989, 2176
TseFI	GTSAC	3 cut(s)	187, 361, 1898
TseI	GCWGC	8 cut(s)	124, 127, 1256, 1485, 1510, 1622, 2198, 2254
Tsp45I	GTSAC	3 cut(s)	187, 361, 1898
TspDTI	ATGAA	9 cut(s)	597, 694, 1266, 1556, 2079, 2126, 2163, 2250, 2287
TspGWI	ACGGA	2 cut(s)	77, 2151
TspRI	CASTG	6 cut(s)	1216, 1282, 1365, 1871, 1989, 2176
Van91I	CCANNNNNTGG	1 cut(s)	1348
Vha464I	CTTAAG	1 cut(s)	1010
VneI	GTGCAC	2 cut(s)	2102, 2132
VpaK11BI	GGWCC	5 cut(s)	664, 866, 1202, 1634, 1673
XapI	RAATTY	8 cut(s)	236, 568, 701, 1118, 1417, 1628, 2286, 2294
XbaI	TCTAGA	2 cut(s)	691, 1099
XceI	RCATGY	4 cut(s)	563, 1197, 1391, 2248
XspI	CTAG	5 cut(s)	692, 1100, 1442, 1886, 2202
Zsp2I	ATGCAT	2 cut(s)	759, 954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.