FvH4_7g33920

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0015697
Physical Location & Seq
Reverse (-)
24024829 .. 24027485
2657 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33920.t2

Sequence Viewer

Length: 1224 bp
ATGGCAGGGTCGACGTCCTCCGGCGCTGGGCCGTCGAATCCTCCGAAGATCCTATTGGCAAAGCCGGGACTGGTGACCGGCTCTCCGGTAGCGGGAAAGTACGGGCGCGGCGGTAGTGGGGATGAGAATACGGCGTCGCTTCGGTCTCGCCTCCCTTCAATCGGATCCCTCAACCTCCTCTCTGATTCCTGGGACTTCCACATCGACCGCTTCCTCCCGTTTTTAACTGACAACACTGAGTTCACGGTGGTCGGGGTGATTGGTCCGCCTGGTGTCGGCAAGTCCACCATTATGAACGAGCTTTACGGCTTCGATGCCACCTCACCTGGCATGCTACCTCCATTTGCTATAGAGACTGAAGAAGGTAAAGCAATGGCCAGGCATTGTAGCGTGGGCATTGAACCTCGGGTTTCCGCTGAGCGCCTTATACTGCTTGACACCCAGCCGGTTTTTAGTCCTTCTGTATTAGCGGAGATGATGAGGCCTGATGGATCATCCACCATTCCTGTTCTAAACGGTGAATCTTTATCGGCCGAGTTAGCTCATGAAATTATGGGAATTCAGCTTGGTGTTCTTCTGACTTCCATCTGTCACATTCTGTTGGTTATATCGGAAGGAGTTCATGATCATAATATGTGGCATTTGATGTCGACGGTTGATCTATTGAAACATGGTATACCTGATCCATCTTCACACACGCTTTCTCATTCTCAGAGCTCTAATACAGGGACTGAAAAGGATAGCAAGGAAAAAGTTCCTGAAGGTGGAGAGTATATGGCTTTGCCAGTTTTTGTGCACACAAGACTACGAGATCACGATCTTAGTCCACATAGTATCGTGCAACTGAGGAAGGCGCTTCAACACTACACCAGCACTTCTTTTTTCACAAGAACTAAAGAGGCAAATGTGTCTAGAGAACATCATGTGACTTCTACAGACCCCGTTACTCAAAATCAGGATCCTGATTCTCCTGTGCCAAAGGTGTATGTAATCCCAATGAGGAGTAAAGATGACTCCCCAGGAGAACAGTATGAAAGTTATACCTCTATGCTATGGAAATTGCGGGACCAGGTCTTATCCATGAATGCCCCTTCTTTCCGAAAGACTCTGTCTGAACGTGACTGGTTGAAGAACTCCGCCAAGATATGGGAACTGGTGAAGAGCTCTTCGATTATTGCAGAATACAGCAGAACACTTCAGAGTTCTGGTATGTTTAGGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

408

Amino Acids

44.54

Weight (kDa)

6.15

Isoelectric Point (pI)

52.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015697)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g33920 FvH4_7g33920
malus_domestica MD07G1308500.v1.1
prunus_persica Prupe.2G325700_v2.0.a1
pyrus_communis pycom07g28070
rosa_chinensis RchiOBHm_Chr1g0384131
rosa_laevigata RLG00000026069
rosa_multiflora Rmu_sc0005139.1_g000016 Rmu_sc0014419.1_g000001
rosa_roxburghii Rroxscaffold_4G00276960
rosa_rugosa Rorug01G0445100
rosa_samantha Rh1AG470600 Rh1BG428000 Rh1CG440700 Rh1DG461000
rosa_wichuraiana Rw1G040210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 17
AccB7I CCANNNNNTGG 1 cut(s) 1146
AccI GTMKAC 3 cut(s) 11, 650, 676
AccII CGCG 1 cut(s) 108
AciI CCGC 9 cut(s) 92, 108, 111, 208, 266, 414, 470, 1063, 1137
AclWI GGATC 7 cut(s) 43, 159, 172, 499, 677, 953, 966
AcoI YGGCCR 2 cut(s) 375, 531
AcsI RAATTY 1 cut(s) 558
AcuI CTGAAG 3 cut(s) 378, 780, 1181
AcyI GRCGYC 2 cut(s) 14, 134
AfaI GTAC 1 cut(s) 101
AfiI CCNNNNNNNGG 6 cut(s) 27, 92, 161, 275, 764, 1146
AgsI TTSAA 5 cut(s) 159, 401, 667, 860, 1129
AjnI CCWGG 6 cut(s) 188, 268, 325, 377, 1018, 1068
AjuI GAANNNNNNNTTGG 2 cut(s) 38, 70
AluBI AGCT 5 cut(s) 301, 542, 565, 717, 1164
AluI AGCT 5 cut(s) 301, 542, 565, 717, 1164
Alw21I GWGCWC 3 cut(s) 719, 798, 1166
Alw26I GTCTC 2 cut(s) 150, 347
Alw44I GTGCAC 1 cut(s) 794
AlwI GGATC 7 cut(s) 43, 159, 172, 499, 677, 953, 966
AlwNI CAGNNNCTG 1 cut(s) 731
Ama87I CYCGRG 1 cut(s) 405
AoxI GGCC 4 cut(s) 29, 375, 482, 531
ApaLI GTGCAC 1 cut(s) 794
ApoI RAATTY 1 cut(s) 558
Asp700I GAANNNNTTC 2 cut(s) 618, 753
AspLEI GCGC 4 cut(s) 26, 108, 423, 856
AspS9I GGNCC 3 cut(s) 29, 263, 1066
AsuC2I CCSGG 1 cut(s) 66
AsuHPI GGTGA 5 cut(s) 85, 268, 315, 530, 1168
AvaI CYCGRG 1 cut(s) 405
AvaII GGWCC 2 cut(s) 263, 1066
BaeGI GKGCMC 1 cut(s) 798
BalI TGGCCA 1 cut(s) 377
BamHI GGATCC 2 cut(s) 164, 958
BanII GRGCYC 2 cut(s) 719, 1166
Bbv12I GWGCWC 3 cut(s) 719, 798, 1166
BccI CCATC 3 cut(s) 482, 593, 694
BceAI ACGGC 3 cut(s) 16, 147, 322
BciT130I CCWGG 6 cut(s) 190, 270, 327, 379, 1020, 1070
BclI TGATCA 1 cut(s) 625
BcnI CCSGG 1 cut(s) 66
BcoDI GTCTC 2 cut(s) 150, 347
BfaI CTAG 1 cut(s) 912
BfmI CTRYAG 2 cut(s) 348, 933
BfoI RGCGCY 3 cut(s) 27, 424, 857
BisI GCNGC 1 cut(s) 109
BlpI GCTNAGC 1 cut(s) 417
BlsI GCNGC 1 cut(s) 110
Bme1390I CCNGG 7 cut(s) 66, 190, 270, 327, 379, 1020, 1070
Bme18I GGWCC 2 cut(s) 263, 1066
BmeT110I CYCGRG 1 cut(s) 405
BmgT120I GGNCC 3 cut(s) 29, 263, 1066
BmiI GGNNCC 3 cut(s) 166, 960, 1067
BmrFI CCNGG 7 cut(s) 66, 190, 270, 327, 379, 1020, 1070
BmsI GCATC 1 cut(s) 304
Bpu1102I GCTNAGC 1 cut(s) 417
BpuMI CCSGG 1 cut(s) 66
BsaBI GATNNNNATC 1 cut(s) 816
BsaHI GRCGYC 2 cut(s) 14, 134
BsaI GGTCTC 1 cut(s) 150
BsaJI CCNNGG 3 cut(s) 189, 404, 1018
BsaWI WCCGGW 1 cut(s) 85
BsaXI ACNNNNNCTCC 2 cut(s) 67, 97
Bsc4I CCNNNNNNNGG 6 cut(s) 27, 92, 161, 275, 764, 1146
Bse118I RCCGGY 2 cut(s) 77, 445
Bse1I ACTGG 4 cut(s) 75, 785, 1127, 1158
Bse3DI GCAATG 1 cut(s) 378
Bse8I GATNNNNATC 1 cut(s) 816
BseBI CCWGG 6 cut(s) 190, 270, 327, 379, 1020, 1070
BseDI CCNNGG 3 cut(s) 189, 404, 1018
BseGI GGATG 2 cut(s) 127, 494
BseJI GATNNNNATC 1 cut(s) 816
BseLI CCNNNNNNNGG 6 cut(s) 27, 92, 161, 275, 764, 1146
BseMI GCAATG 1 cut(s) 378
BseMII CTCAG 4 cut(s) 228, 408, 725, 836
BseNI ACTGG 4 cut(s) 75, 785, 1127, 1158
BseRI GAGGAG 2 cut(s) 167, 1015
BseSI GKGCMC 1 cut(s) 798
BseX3I CGGCCG 1 cut(s) 531
BseYI CCCAGC 2 cut(s) 26, 441
Bsh1236I CGCG 1 cut(s) 108
Bsh1285I CGRYCG 2 cut(s) 208, 534
BshFI GGCC 4 cut(s) 31, 377, 484, 533
BsiEI CGRYCG 2 cut(s) 208, 534
BsiHKAI GWGCWC 3 cut(s) 719, 798, 1166
BsiHKCI CYCGRG 1 cut(s) 405
BsiSI CCGG 5 cut(s) 21, 65, 78, 86, 446
BslFI GGGAC 4 cut(s) 81, 206, 742, 1079
BslI CCNNNNNNNGG 6 cut(s) 27, 92, 161, 275, 764, 1146
BsmAI GTCTC 2 cut(s) 150, 347
BsmFI GGGAC 4 cut(s) 81, 206, 742, 1079
BsmI GAATGC 1 cut(s) 1090
BsnI GGCC 4 cut(s) 31, 377, 484, 533
Bso31I GGTCTC 1 cut(s) 150
BsoBI CYCGRG 1 cut(s) 405
Bsp1286I GDGCHC 3 cut(s) 719, 798, 1166
Bsp143I GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
Bsp1720I GCTNAGC 1 cut(s) 417
BspACI CCGC 9 cut(s) 92, 108, 111, 208, 266, 414, 470, 1063, 1137
BspANI GGCC 4 cut(s) 31, 377, 484, 533
BspCNI CTCAG 4 cut(s) 229, 409, 724, 837
BspFNI CGCG 1 cut(s) 108
BspHI TCATGA 2 cut(s) 544, 622
BspLI GGNNCC 3 cut(s) 166, 960, 1067
BspPI GGATC 7 cut(s) 43, 159, 172, 499, 677, 953, 966
BspQI GCTCTTC 2 cut(s) 1154, 1171
BspTNI GGTCTC 1 cut(s) 150
BsrDI GCAATG 1 cut(s) 378
BsrFI RCCGGY 2 cut(s) 77, 445
BsrI ACTGG 4 cut(s) 75, 785, 1127, 1158
BssAI RCCGGY 2 cut(s) 77, 445
BssECI CCNNGG 3 cut(s) 189, 404, 1018
BssMI GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
BssNAI GTATAC 1 cut(s) 677
BssNI GRCGYC 2 cut(s) 14, 134
Bst1107I GTATAC 1 cut(s) 677
Bst2UI CCWGG 6 cut(s) 190, 270, 327, 379, 1020, 1070
Bst4CI ACNGT 4 cut(s) 247, 518, 655, 1029
Bst6I CTCTTC 2 cut(s) 1154, 1171
BstACI GRCGYC 2 cut(s) 14, 134
BstC8I GCNNGC 1 cut(s) 332
BstDEI CTNAG 5 cut(s) 237, 417, 711, 821, 845
BstEII GGTNACC 1 cut(s) 73
BstF5I GGATG 2 cut(s) 127, 494
BstFNI CGCG 1 cut(s) 108
BstH2I RGCGCY 3 cut(s) 27, 424, 857
BstHHI GCGC 4 cut(s) 26, 108, 423, 856
BstKTI GATC 9 cut(s) 51, 167, 494, 628, 661, 685, 814, 820, 961
BstMAI GTCTC 2 cut(s) 150, 347
BstMBI GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
BstMCI CGRYCG 2 cut(s) 208, 534
BstMWI GCNNNNNNNGC 1 cut(s) 539
BstNI CCWGG 6 cut(s) 190, 270, 327, 379, 1020, 1070
BstNSI RCATGY 1 cut(s) 334
BstPI GGTNACC 1 cut(s) 73
BstSCI CCNGG 7 cut(s) 64, 188, 268, 325, 377, 1018, 1068
BstSFI CTRYAG 2 cut(s) 348, 933
BstSLI GKGCMC 1 cut(s) 798
BstUI CGCG 1 cut(s) 108
BstX2I RGATCY 3 cut(s) 48, 164, 958
BstYI RGATCY 3 cut(s) 48, 164, 958
BstZ17I GTATAC 1 cut(s) 677
BstZI CGGCCG 1 cut(s) 531
BsuRI GGCC 4 cut(s) 31, 377, 484, 533
BtsCI GGATG 2 cut(s) 127, 494
BtsIMutI CAGTG 1 cut(s) 234
Cac8I GCNNGC 1 cut(s) 332
CaiI CAGNNNCTG 1 cut(s) 731
CciI TCATGA 2 cut(s) 544, 622
CfoI GCGC 4 cut(s) 26, 108, 423, 856
Cfr10I RCCGGY 2 cut(s) 77, 445
Cfr13I GGNCC 3 cut(s) 29, 263, 1066
CseI GACGC 1 cut(s) 123
CsiI ACCWGGT 1 cut(s) 1068
Csp6I GTAC 1 cut(s) 100
CviAII CATG 6 cut(s) 331, 545, 623, 671, 923, 1081
CviQI GTAC 1 cut(s) 100
DdeI CTNAG 5 cut(s) 237, 417, 711, 821, 845
DpnI GATC 9 cut(s) 50, 166, 493, 627, 660, 684, 813, 819, 960
DpnII GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
EaeI YGGCCR 2 cut(s) 375, 531
EagI CGGCCG 1 cut(s) 531
Eam1104I CTCTTC 2 cut(s) 1154, 1171
EarI CTCTTC 2 cut(s) 1154, 1171
EciI GGCGGA 2 cut(s) 255, 1126
Ecl136II GAGCTC 2 cut(s) 717, 1164
EclXI CGGCCG 1 cut(s) 531
Eco147I AGGCCT 1 cut(s) 484
Eco24I GRGCYC 2 cut(s) 719, 1166
Eco31I GGTCTC 1 cut(s) 150
Eco47I GGWCC 2 cut(s) 263, 1066
Eco52I CGGCCG 1 cut(s) 531
Eco53kI GAGCTC 2 cut(s) 717, 1164
Eco57I CTGAAG 3 cut(s) 378, 780, 1181
Eco88I CYCGRG 1 cut(s) 405
Eco91I GGTNACC 1 cut(s) 73
EcoICRI GAGCTC 2 cut(s) 717, 1164
EcoO65I GGTNACC 1 cut(s) 73
EcoRI GAATTC 1 cut(s) 558
EcoRII CCWGG 6 cut(s) 188, 268, 325, 377, 1018, 1068
EcoT38I GRGCYC 2 cut(s) 719, 1166
FaeI CATG 6 cut(s) 334, 548, 626, 674, 926, 1084
FaqI GGGAC 4 cut(s) 81, 206, 742, 1079
FatI CATG 6 cut(s) 330, 544, 622, 670, 922, 1080
FauI CCCGC 2 cut(s) 85, 1056
FbaI TGATCA 1 cut(s) 625
FblI GTMKAC 3 cut(s) 11, 650, 676
Fnu4HI GCNGC 1 cut(s) 109
FokI GGATG 2 cut(s) 134, 481
FriOI GRGCYC 2 cut(s) 719, 1166
Fsp4HI GCNGC 1 cut(s) 109
FspBI CTAG 1 cut(s) 912
GlaI GCGC 4 cut(s) 25, 107, 422, 855
GluI GCNGC 1 cut(s) 109
GsaI CCCAGC 2 cut(s) 30, 445
HaeII RGCGCY 3 cut(s) 27, 424, 857
HaeIII GGCC 4 cut(s) 31, 377, 484, 533
HapII CCGG 5 cut(s) 21, 65, 78, 86, 446
HgaI GACGC 1 cut(s) 123
HhaI GCGC 4 cut(s) 26, 108, 423, 856
Hin1I GRCGYC 2 cut(s) 14, 134
Hin1II CATG 6 cut(s) 334, 548, 626, 674, 926, 1084
Hin6I GCGC 4 cut(s) 24, 106, 421, 854
HinP1I GCGC 4 cut(s) 24, 106, 421, 854
HincII GTYRAC 2 cut(s) 12, 651
HindII GTYRAC 2 cut(s) 12, 651
HinfI GANTC 6 cut(s) 37, 185, 521, 965, 1013, 1105
HpaII CCGG 5 cut(s) 21, 65, 78, 86, 446
HphI GGTGA 5 cut(s) 85, 268, 315, 530, 1168
Hpy166II GTNNAC 7 cut(s) 12, 243, 285, 651, 677, 796, 827
Hpy188I TCNGA 9 cut(s) 45, 164, 184, 579, 613, 714, 1100, 1114, 1200
Hpy188III TCNNGA 7 cut(s) 545, 623, 758, 815, 912, 956, 962
Hpy8I GTNNAC 7 cut(s) 12, 243, 285, 651, 677, 796, 827
Hpy99I CGWCG 4 cut(s) 16, 37, 139, 655
HpyAV CCTTC 7 cut(s) 165, 356, 468, 608, 755, 844, 1101
HpyCH4III ACNGT 4 cut(s) 247, 518, 655, 1029
HpyCH4IV ACGT 2 cut(s) 14, 1117
HpyCH4V TGCA 3 cut(s) 796, 841, 1178
HpyF10VI GCNNNNNNNGC 1 cut(s) 539
HpyF3I CTNAG 5 cut(s) 237, 417, 711, 821, 845
HpySE526I ACGT 2 cut(s) 14, 1117
Hsp92I GRCGYC 2 cut(s) 14, 134
Hsp92II CATG 6 cut(s) 334, 548, 626, 674, 926, 1084
HspAI GCGC 4 cut(s) 24, 106, 421, 854
Ksp22I TGATCA 1 cut(s) 625
Kzo9I GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
LguI GCTCTTC 2 cut(s) 1154, 1171
LweI GCATC 1 cut(s) 304
MabI ACCWGGT 1 cut(s) 1068
MaeI CTAG 1 cut(s) 912
MaeII ACGT 2 cut(s) 14, 1117
MaeIII GTNAC 5 cut(s) 73, 590, 925, 943, 1118
MalI GATC 9 cut(s) 50, 166, 493, 627, 660, 684, 813, 819, 960
MboI GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
MboII GAAGA 7 cut(s) 58, 371, 566, 681, 1141, 1158, 1171
MflI RGATCY 3 cut(s) 48, 164, 958
MhlI GDGCHC 3 cut(s) 719, 798, 1166
MlsI TGGCCA 1 cut(s) 377
MluCI AATT 3 cut(s) 549, 558, 1058
MluNI TGGCCA 1 cut(s) 377
MlyI GAGTC 2 cut(s) 1007, 1099
Mox20I TGGCCA 1 cut(s) 377
MroXI GAANNNNTTC 2 cut(s) 618, 753
MscI TGGCCA 1 cut(s) 377
MseI TTAA 1 cut(s) 224
MslI CAYNNNNRTG 1 cut(s) 290
Msp20I TGGCCA 1 cut(s) 377
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 5 cut(s) 21, 65, 78, 86, 446
MspR9I CCNGG 7 cut(s) 66, 190, 270, 327, 379, 1020, 1070
Mva1269I GAATGC 1 cut(s) 1090
MvaI CCWGG 6 cut(s) 190, 270, 327, 379, 1020, 1070
MvnI CGCG 1 cut(s) 108
MwoI GCNNNNNNNGC 1 cut(s) 539
NciI CCSGG 1 cut(s) 66
NdeII GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
NlaIII CATG 6 cut(s) 334, 548, 626, 674, 926, 1084
NlaIV GGNNCC 3 cut(s) 166, 960, 1067
NmeAIII GCCGAG 1 cut(s) 559
NmuCI GTSAC 4 cut(s) 73, 590, 925, 1118
NspI RCATGY 1 cut(s) 334
PaeI GCATGC 1 cut(s) 334
PagI TCATGA 2 cut(s) 544, 622
PceI AGGCCT 1 cut(s) 484
PciSI GCTCTTC 2 cut(s) 1154, 1171
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PctI GAATGC 1 cut(s) 1090
PdmI GAANNNNTTC 2 cut(s) 618, 753
PfeI GAWTC 4 cut(s) 37, 185, 521, 965
PflFI GACNNNGTC 2 cut(s) 1070, 1108
PflMI CCANNNNNTGG 1 cut(s) 1146
PkrI GCNGC 1 cut(s) 110
PleI GAGTC 2 cut(s) 1007, 1099
PpsI GAGTC 2 cut(s) 1007, 1099
Psp124BI GAGCTC 2 cut(s) 719, 1166
Psp6I CCWGG 6 cut(s) 188, 268, 325, 377, 1018, 1068
PspEI GGTNACC 1 cut(s) 73
PspFI CCCAGC 2 cut(s) 26, 441
PspGI CCWGG 6 cut(s) 188, 268, 325, 377, 1018, 1068
PspN4I GGNNCC 3 cut(s) 166, 960, 1067
PspPI GGNCC 3 cut(s) 29, 263, 1066
PsrI GAACNNNNNNTAC 2 cut(s) 287, 319
PstNI CAGNNNCTG 1 cut(s) 731
PsuI RGATCY 3 cut(s) 48, 164, 958
PsyI GACNNNGTC 2 cut(s) 1070, 1108
RsaI GTAC 1 cut(s) 101
RsaNI GTAC 1 cut(s) 100
RseI CAYNNNNRTG 1 cut(s) 290
SacI GAGCTC 2 cut(s) 719, 1166
SalI GTCGAC 2 cut(s) 10, 649
SapI GCTCTTC 2 cut(s) 1154, 1171
SaqAI TTAA 1 cut(s) 224
SatI GCNGC 1 cut(s) 109
Sau3AI GATC 9 cut(s) 48, 164, 491, 625, 658, 682, 811, 817, 958
Sau96I GGNCC 3 cut(s) 29, 263, 1066
SchI GAGTC 2 cut(s) 1007, 1099
ScrFI CCNGG 7 cut(s) 66, 190, 270, 327, 379, 1020, 1070
SduI GDGCHC 3 cut(s) 719, 798, 1166
SexAI ACCWGGT 1 cut(s) 1068
SfaNI GCATC 1 cut(s) 304
SfcI CTRYAG 2 cut(s) 348, 933
SinI GGWCC 2 cut(s) 263, 1066
SmiMI CAYNNNNRTG 1 cut(s) 290
SphI GCATGC 1 cut(s) 334
Sse9I AATT 3 cut(s) 549, 558, 1058
SseBI AGGCCT 1 cut(s) 484
SsiI CCGC 9 cut(s) 92, 108, 111, 208, 266, 414, 470, 1063, 1137
SspMI CTAG 1 cut(s) 912
SstI GAGCTC 2 cut(s) 719, 1166
StuI AGGCCT 1 cut(s) 484
StyD4I CCNGG 7 cut(s) 64, 188, 268, 325, 377, 1018, 1068
TaaI ACNGT 4 cut(s) 247, 518, 655, 1029
TaiI ACGT 2 cut(s) 17, 1120
TaqI TCGA 6 cut(s) 11, 35, 204, 312, 650, 1169
TaqII GACCGA 1 cut(s) 132
TasI AATT 3 cut(s) 549, 558, 1058
TauI GCSGC 1 cut(s) 111
TfiI GAWTC 4 cut(s) 37, 185, 521, 965
Tru1I TTAA 1 cut(s) 224
Tru9I TTAA 1 cut(s) 224
TscAI CASTG 1 cut(s) 241
TseFI GTSAC 4 cut(s) 73, 590, 925, 1118
Tsp45I GTSAC 4 cut(s) 73, 590, 925, 1118
TspDTI ATGAA 5 cut(s) 308, 561, 611, 1047, 1097
TspRI CASTG 1 cut(s) 241
Tth111I GACNNNGTC 2 cut(s) 1070, 1108
Van91I CCANNNNNTGG 1 cut(s) 1146
VneI GTGCAC 1 cut(s) 794
VpaK11BI GGWCC 2 cut(s) 263, 1066
XapI RAATTY 1 cut(s) 558
XbaI TCTAGA 1 cut(s) 911
XceI RCATGY 1 cut(s) 334
XmiI GTMKAC 3 cut(s) 11, 650, 676
XmnI GAANNNNTTC 2 cut(s) 618, 753
XspI CTAG 1 cut(s) 912
ZraI GACGTC 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.