Rh1CG440700

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0015697
Physical Location & Seq
Reverse (-)
69405923 .. 69407963
2041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG440700.1

Sequence Viewer

Length: 1224 bp
ATGGCAGGGTCGTCGTCCTCCGGCGGTGGGCCGTCGAATCCTCCGAAAATCCTGTTGGCAAAGCCGGGACTGGTGACCGGCGCGCCGGTGGCGGGTAAATATGGGCGCGGCGGCAGTGGGGATGAGTATACGGCGTCGCTTCGGTCTCGCCTCCCTTCTATCGGATCCCTCAACCTCCTCTCTGATTCCTGGGAGTTCCACATCGACCGCTTCCTCCCGTTTTTGACTGAGAACACTGAGTTCACGGTGGTGGGGGTGATTGGTCCGCCTGGAGTTGGCAAGTCCACCATTATGAACGAGCTTTACGGCTTCGATGCCACCTCACCTGGGATGCTACCTCCATTTGCTATAGAGACTGAAGAAGGTAAAGCAATGGCAAGGCATTGTAGTGTGGGAATTGAACCTAGGGTTTCGGCCGAACGCCTTATACTTCTTGACACCCAGCCGGTTTTTAGTCCTTCTGTTTTAGCTGAGATGATGAGGCCTGATGGATCATCCACCATTCCTGTTCTAAATGCTGAATCTTTATCGGCCGAGTTAGCTCATGAAATTATGGGCATTCAGCTTGGTGTTCTTCTGACTTCCATCTGTCACATTATTCTGGTTATATCGGAAGGAGTTCATGACCATAATATGTGGCATTTAATGTCAACGGTTGACCTATTGAAACATGGTATACCGGATCCATCTTCACACACCCTTTCTCATTCTCAGAGCTCTAATATAGGGCCTGAAAAAGATAGCAAGGAAAAAGTTCCAGAAGGTGGAGAGTATATGGCTATGCCAGTTTTTGTGCACACAAAACTACGAGATCACAATCTTAGTCCACATAGTATTGTGCAACTGAGGAAGGCACTTCAACAATACACCAGCACCTCTTCTTTCATGAGAGCAAAAAATGCAAATGTGTCTAGAGAACATCCTGAGACTTCTATGGCTCCCGGTACTGAAAGTCATGATCCTGCTTCTGCTGTGCCAAAGTTGTATGTAATCCCAATGAAGAGTAAAGATGACTCCCCAAGAGATCAATATGAAAGTTATACCTCTATGCTATGGAAATTGCGGGACCAGGTCTTATCTATGAATCCCCCTTCTTTCCGAAAGACTCTGACTGAACGTGACTGGTTGAAGAACTCTGCCAAGATATGGGAACTGGTGAAGAGCTCTCCGATTATTGCAGAATACAGCAGAACACTTCAGAGCTCTGGTATGTTTAGGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

407

Amino Acids

44.47

Weight (kDa)

6.44

Isoelectric Point (pI)

56.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015697)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g33920 FvH4_7g33920
malus_domestica MD07G1308500.v1.1
prunus_persica Prupe.2G325700_v2.0.a1
pyrus_communis pycom07g28070
rosa_chinensis RchiOBHm_Chr1g0384131
rosa_laevigata RLG00000026069
rosa_multiflora Rmu_sc0005139.1_g000016 Rmu_sc0014419.1_g000001
rosa_roxburghii Rroxscaffold_4G00276960
rosa_rugosa Rorug01G0445100
rosa_samantha Rh1AG470600 Rh1BG428000 Rh1CG440700 Rh1DG461000
rosa_wichuraiana Rw1G040210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 764, 1146
AccI GTMKAC 2 cut(s) 128, 676
AccII CGCG 2 cut(s) 83, 108
AciI CCGC 7 cut(s) 24, 92, 108, 111, 208, 266, 1063
AclWI GGATC 6 cut(s) 159, 172, 499, 677, 690, 953
AcoI YGGCCR 2 cut(s) 414, 531
AcuI CTGAAG 2 cut(s) 378, 1181
AcyI GRCGYC 1 cut(s) 134
AfaI GTAC 1 cut(s) 946
AfiI CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 764, 1146
AgsI TTSAA 4 cut(s) 401, 667, 860, 1129
AjnI CCWGG 4 cut(s) 188, 268, 325, 1068
AjuI GAANNNNNNNTTGG 2 cut(s) 38, 70
AleI CACNNNNGTG 1 cut(s) 248
AluBI AGCT 7 cut(s) 301, 470, 542, 565, 717, 1164, 1203
AluI AGCT 7 cut(s) 301, 470, 542, 565, 717, 1164, 1203
Alw21I GWGCWC 4 cut(s) 719, 798, 1166, 1205
Alw26I GTCTC 3 cut(s) 150, 347, 920
Alw44I GTGCAC 1 cut(s) 794
AlwI GGATC 6 cut(s) 159, 172, 499, 677, 690, 953
AoxI GGCC 5 cut(s) 29, 414, 482, 531, 728
ApaLI GTGCAC 1 cut(s) 794
AscI GGCGCGCC 1 cut(s) 81
Asp700I GAANNNNTTC 2 cut(s) 618, 753
AspA2I CCTAGG 1 cut(s) 404
AspLEI GCGC 3 cut(s) 83, 85, 108
AspS9I GGNCC 4 cut(s) 29, 263, 728, 1066
AsuC2I CCSGG 2 cut(s) 66, 942
AsuHPI GGTGA 4 cut(s) 85, 268, 315, 1168
AvaII GGWCC 2 cut(s) 263, 1066
AvrII CCTAGG 1 cut(s) 404
BaeGI GKGCMC 1 cut(s) 798
BamHI GGATCC 2 cut(s) 164, 682
BanII GRGCYC 3 cut(s) 719, 1166, 1205
Bbv12I GWGCWC 4 cut(s) 719, 798, 1166, 1205
BccI CCATC 3 cut(s) 482, 593, 694
BceAI ACGGC 3 cut(s) 16, 147, 322
BcgI CGANNNNNNTGC 1 cut(s) 28
BciT130I CCWGG 4 cut(s) 190, 270, 327, 1070
BcnI CCSGG 2 cut(s) 66, 942
BcoDI GTCTC 3 cut(s) 150, 347, 920
BfaI CTAG 2 cut(s) 405, 912
BfmI CTRYAG 1 cut(s) 348
BisI GCNGC 2 cut(s) 109, 112
BlnI CCTAGG 1 cut(s) 404
BlsI GCNGC 2 cut(s) 110, 113
Bme1390I CCNGG 6 cut(s) 66, 190, 270, 327, 942, 1070
Bme18I GGWCC 2 cut(s) 263, 1066
BmgT120I GGNCC 4 cut(s) 29, 263, 728, 1066
BmiI GGNNCC 4 cut(s) 166, 684, 939, 1067
BmrFI CCNGG 6 cut(s) 66, 190, 270, 327, 942, 1070
BmsI GCATC 2 cut(s) 304, 321
BpmI CTGGAG 1 cut(s) 291
BpuMI CCSGG 2 cut(s) 66, 942
BsaBI GATNNNNATC 1 cut(s) 816
BsaHI GRCGYC 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 150
BsaJI CCNNGG 3 cut(s) 189, 326, 404
BsaWI WCCGGW 1 cut(s) 679
Bsc4I CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 764, 1146
Bse118I RCCGGY 3 cut(s) 77, 85, 445
Bse1I ACTGG 4 cut(s) 75, 785, 1127, 1158
Bse3DI GCAATG 1 cut(s) 378
Bse8I GATNNNNATC 1 cut(s) 816
BseBI CCWGG 4 cut(s) 190, 270, 327, 1070
BseDI CCNNGG 3 cut(s) 189, 326, 404
BseGI GGATG 4 cut(s) 127, 336, 494, 919
BseJI GATNNNNATC 1 cut(s) 816
BseLI CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 764, 1146
BseMI GCAATG 1 cut(s) 378
BseMII CTCAG 6 cut(s) 219, 228, 462, 725, 836, 915
BseNI ACTGG 4 cut(s) 75, 785, 1127, 1158
BsePI GCGCGC 1 cut(s) 81
BseRI GAGGAG 1 cut(s) 167
BseSI GKGCMC 1 cut(s) 798
BseX3I CGGCCG 2 cut(s) 414, 531
BseYI CCCAGC 1 cut(s) 441
Bsh1236I CGCG 2 cut(s) 83, 108
Bsh1285I CGRYCG 3 cut(s) 208, 417, 534
BshFI GGCC 5 cut(s) 31, 416, 484, 533, 730
BsiEI CGRYCG 3 cut(s) 208, 417, 534
BsiHKAI GWGCWC 4 cut(s) 719, 798, 1166, 1205
BsiSI CCGG 7 cut(s) 21, 65, 78, 86, 446, 680, 942
BslFI GGGAC 2 cut(s) 81, 1079
BslI CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 764, 1146
BsmAI GTCTC 3 cut(s) 150, 347, 920
BsmFI GGGAC 2 cut(s) 81, 1079
BsmI GAATGC 1 cut(s) 558
BsnI GGCC 5 cut(s) 31, 416, 484, 533, 730
Bso31I GGTCTC 1 cut(s) 150
Bsp1286I GDGCHC 4 cut(s) 719, 798, 1166, 1205
Bsp143I GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
BspACI CCGC 7 cut(s) 24, 92, 108, 111, 208, 266, 1063
BspANI GGCC 5 cut(s) 31, 416, 484, 533, 730
BspCNI CTCAG 6 cut(s) 220, 229, 463, 724, 837, 916
BspFNI CGCG 2 cut(s) 83, 108
BspHI TCATGA 4 cut(s) 544, 622, 885, 955
BspLI GGNNCC 4 cut(s) 166, 684, 939, 1067
BspPI GGATC 6 cut(s) 159, 172, 499, 677, 690, 953
BspQI GCTCTTC 1 cut(s) 1154
BspTNI GGTCTC 1 cut(s) 150
BsrDI GCAATG 1 cut(s) 378
BsrFI RCCGGY 3 cut(s) 77, 85, 445
BsrI ACTGG 4 cut(s) 75, 785, 1127, 1158
BssAI RCCGGY 3 cut(s) 77, 85, 445
BssECI CCNNGG 3 cut(s) 189, 326, 404
BssHII GCGCGC 1 cut(s) 81
BssMI GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
BssNAI GTATAC 2 cut(s) 129, 677
BssNI GRCGYC 1 cut(s) 134
BssT1I CCWWGG 1 cut(s) 404
Bst1107I GTATAC 2 cut(s) 129, 677
Bst2UI CCWGG 4 cut(s) 190, 270, 327, 1070
Bst4CI ACNGT 2 cut(s) 247, 655
Bst6I CTCTTC 3 cut(s) 883, 995, 1154
BstACI GRCGYC 1 cut(s) 134
BstAPI GCANNNNNTGC 1 cut(s) 899
BstC8I GCNNGC 1 cut(s) 83
BstDEI CTNAG 7 cut(s) 228, 237, 471, 711, 821, 845, 924
BstEII GGTNACC 1 cut(s) 73
BstF5I GGATG 4 cut(s) 127, 336, 494, 919
BstFNI CGCG 2 cut(s) 83, 108
BstHHI GCGC 3 cut(s) 83, 85, 108
BstKTI GATC 6 cut(s) 167, 494, 685, 814, 961, 1027
BstMAI GTCTC 3 cut(s) 150, 347, 920
BstMBI GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
BstMCI CGRYCG 3 cut(s) 208, 417, 534
BstMWI GCNNNNNNNGC 3 cut(s) 89, 539, 899
BstNI CCWGG 4 cut(s) 190, 270, 327, 1070
BstPI GGTNACC 1 cut(s) 73
BstSCI CCNGG 6 cut(s) 64, 188, 268, 325, 940, 1068
BstSFI CTRYAG 1 cut(s) 348
BstSLI GKGCMC 1 cut(s) 798
BstUI CGCG 2 cut(s) 83, 108
BstX2I RGATCY 2 cut(s) 164, 682
BstYI RGATCY 2 cut(s) 164, 682
BstZ17I GTATAC 2 cut(s) 129, 677
BstZI CGGCCG 2 cut(s) 414, 531
BsuRI GGCC 5 cut(s) 31, 416, 484, 533, 730
BtsCI GGATG 4 cut(s) 127, 336, 494, 919
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 2 cut(s) 121, 234
Cac8I GCNNGC 1 cut(s) 83
CciI TCATGA 4 cut(s) 544, 622, 885, 955
CfoI GCGC 3 cut(s) 83, 85, 108
Cfr10I RCCGGY 3 cut(s) 77, 85, 445
Cfr13I GGNCC 4 cut(s) 29, 263, 728, 1066
CseI GACGC 1 cut(s) 123
CsiI ACCWGGT 1 cut(s) 1068
Csp6I GTAC 1 cut(s) 945
CviAII CATG 5 cut(s) 545, 623, 671, 886, 956
CviQI GTAC 1 cut(s) 945
DdeI CTNAG 7 cut(s) 228, 237, 471, 711, 821, 845, 924
DpnI GATC 6 cut(s) 166, 493, 684, 813, 960, 1026
DpnII GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
EaeI YGGCCR 2 cut(s) 414, 531
EagI CGGCCG 2 cut(s) 414, 531
Eam1104I CTCTTC 3 cut(s) 883, 995, 1154
EarI CTCTTC 3 cut(s) 883, 995, 1154
EciI GGCGGA 1 cut(s) 255
Ecl136II GAGCTC 3 cut(s) 717, 1164, 1203
EclXI CGGCCG 2 cut(s) 414, 531
Eco130I CCWWGG 1 cut(s) 404
Eco147I AGGCCT 1 cut(s) 484
Eco24I GRGCYC 3 cut(s) 719, 1166, 1205
Eco31I GGTCTC 1 cut(s) 150
Eco47I GGWCC 2 cut(s) 263, 1066
Eco52I CGGCCG 2 cut(s) 414, 531
Eco53kI GAGCTC 3 cut(s) 717, 1164, 1203
Eco57I CTGAAG 2 cut(s) 378, 1181
Eco91I GGTNACC 1 cut(s) 73
EcoICRI GAGCTC 3 cut(s) 717, 1164, 1203
EcoO109I RGGNCCY 1 cut(s) 728
EcoO65I GGTNACC 1 cut(s) 73
EcoRII CCWGG 4 cut(s) 188, 268, 325, 1068
EcoT14I CCWWGG 1 cut(s) 404
EcoT38I GRGCYC 3 cut(s) 719, 1166, 1205
ErhI CCWWGG 1 cut(s) 404
FaeI CATG 5 cut(s) 548, 626, 674, 889, 959
FaqI GGGAC 2 cut(s) 81, 1079
FatI CATG 5 cut(s) 544, 622, 670, 885, 955
FauI CCCGC 2 cut(s) 85, 1056
FblI GTMKAC 2 cut(s) 128, 676
Fnu4HI GCNGC 2 cut(s) 109, 112
FokI GGATG 4 cut(s) 134, 343, 481, 906
FriOI GRGCYC 3 cut(s) 719, 1166, 1205
Fsp4HI GCNGC 2 cut(s) 109, 112
FspBI CTAG 2 cut(s) 405, 912
GlaI GCGC 3 cut(s) 82, 84, 107
GluI GCNGC 2 cut(s) 109, 112
GsaI CCCAGC 1 cut(s) 445
GsuI CTGGAG 1 cut(s) 291
HaeIII GGCC 5 cut(s) 31, 416, 484, 533, 730
HapII CCGG 7 cut(s) 21, 65, 78, 86, 446, 680, 942
HgaI GACGC 1 cut(s) 123
HhaI GCGC 3 cut(s) 83, 85, 108
Hin1I GRCGYC 1 cut(s) 134
Hin1II CATG 5 cut(s) 548, 626, 674, 889, 959
Hin6I GCGC 3 cut(s) 81, 83, 106
HinP1I GCGC 3 cut(s) 81, 83, 106
HincII GTYRAC 2 cut(s) 651, 658
HindII GTYRAC 2 cut(s) 651, 658
HinfI GANTC 6 cut(s) 37, 185, 521, 1013, 1084, 1105
HpaII CCGG 7 cut(s) 21, 65, 78, 86, 446, 680, 942
HphI GGTGA 4 cut(s) 85, 268, 315, 1168
Hpy166II GTNNAC 8 cut(s) 129, 243, 285, 651, 658, 677, 796, 827
Hpy188III TCNNGA 8 cut(s) 434, 545, 623, 758, 886, 912, 923, 956
Hpy8I GTNNAC 8 cut(s) 129, 243, 285, 651, 658, 677, 796, 827
Hpy99I CGWCG 3 cut(s) 16, 37, 139
HpyAV CCTTC 7 cut(s) 165, 356, 468, 608, 755, 844, 1101
HpyCH4III ACNGT 2 cut(s) 247, 655
HpyCH4IV ACGT 1 cut(s) 1117
HpyCH4V TGCA 4 cut(s) 796, 841, 902, 1178
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 539, 899
HpyF3I CTNAG 7 cut(s) 228, 237, 471, 711, 821, 845, 924
HpySE526I ACGT 1 cut(s) 1117
Hsp92I GRCGYC 1 cut(s) 134
Hsp92II CATG 5 cut(s) 548, 626, 674, 889, 959
HspAI GCGC 3 cut(s) 81, 83, 106
Kzo9I GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
LguI GCTCTTC 1 cut(s) 1154
LmnI GCTCC 1 cut(s) 943
LweI GCATC 2 cut(s) 304, 321
MabI ACCWGGT 1 cut(s) 1068
MaeI CTAG 2 cut(s) 405, 912
MaeII ACGT 1 cut(s) 1117
MaeIII GTNAC 3 cut(s) 73, 590, 1118
MalI GATC 6 cut(s) 166, 493, 684, 813, 960, 1026
MboI GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
MboII GAAGA 7 cut(s) 371, 566, 681, 870, 1012, 1141, 1171
MflI RGATCY 2 cut(s) 164, 682
MhlI GDGCHC 4 cut(s) 719, 798, 1166, 1205
MluCI AATT 3 cut(s) 396, 549, 1058
MlyI GAGTC 2 cut(s) 1007, 1099
MroXI GAANNNNTTC 2 cut(s) 618, 753
MseI TTAA 1 cut(s) 644
MslI CAYNNNNRTG 3 cut(s) 248, 290, 387
MspI CCGG 7 cut(s) 21, 65, 78, 86, 446, 680, 942
MspR9I CCNGG 6 cut(s) 66, 190, 270, 327, 942, 1070
Mva1269I GAATGC 1 cut(s) 558
MvaI CCWGG 4 cut(s) 190, 270, 327, 1070
MvnI CGCG 2 cut(s) 83, 108
MwoI GCNNNNNNNGC 3 cut(s) 89, 539, 899
NciI CCSGG 2 cut(s) 66, 942
NdeII GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
NlaIII CATG 5 cut(s) 548, 626, 674, 889, 959
NlaIV GGNNCC 4 cut(s) 166, 684, 939, 1067
NmeAIII GCCGAG 1 cut(s) 559
NmuCI GTSAC 3 cut(s) 73, 590, 1118
OliI CACNNNNGTG 1 cut(s) 248
PagI TCATGA 4 cut(s) 544, 622, 885, 955
PalAI GGCGCGCC 1 cut(s) 81
PauI GCGCGC 1 cut(s) 81
PceI AGGCCT 1 cut(s) 484
PciSI GCTCTTC 1 cut(s) 1154
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PctI GAATGC 1 cut(s) 558
PdmI GAANNNNTTC 2 cut(s) 618, 753
PfeI GAWTC 4 cut(s) 37, 185, 521, 1084
PflFI GACNNNGTC 1 cut(s) 1070
PflMI CCANNNNNTGG 2 cut(s) 764, 1146
PkrI GCNGC 2 cut(s) 110, 113
PleI GAGTC 2 cut(s) 1007, 1099
PpsI GAGTC 2 cut(s) 1007, 1099
Psp124BI GAGCTC 3 cut(s) 719, 1166, 1205
Psp6I CCWGG 4 cut(s) 188, 268, 325, 1068
PspEI GGTNACC 1 cut(s) 73
PspFI CCCAGC 1 cut(s) 441
PspGI CCWGG 4 cut(s) 188, 268, 325, 1068
PspN4I GGNNCC 4 cut(s) 166, 684, 939, 1067
PspPI GGNCC 4 cut(s) 29, 263, 728, 1066
PsrI GAACNNNNNNTAC 4 cut(s) 287, 319, 411, 443
PsuI RGATCY 2 cut(s) 164, 682
PsyI GACNNNGTC 1 cut(s) 1070
PteI GCGCGC 1 cut(s) 81
RsaI GTAC 1 cut(s) 946
RsaNI GTAC 1 cut(s) 945
RseI CAYNNNNRTG 3 cut(s) 248, 290, 387
SacI GAGCTC 3 cut(s) 719, 1166, 1205
SapI GCTCTTC 1 cut(s) 1154
SaqAI TTAA 1 cut(s) 644
SatI GCNGC 2 cut(s) 109, 112
Sau3AI GATC 6 cut(s) 164, 491, 682, 811, 958, 1024
Sau96I GGNCC 4 cut(s) 29, 263, 728, 1066
SchI GAGTC 2 cut(s) 1007, 1099
ScrFI CCNGG 6 cut(s) 66, 190, 270, 327, 942, 1070
SduI GDGCHC 4 cut(s) 719, 798, 1166, 1205
SexAI ACCWGGT 1 cut(s) 1068
SfaNI GCATC 2 cut(s) 304, 321
SfcI CTRYAG 1 cut(s) 348
SgrAI CRCCGGYG 1 cut(s) 85
SgsI GGCGCGCC 1 cut(s) 81
SinI GGWCC 2 cut(s) 263, 1066
SmiMI CAYNNNNRTG 3 cut(s) 248, 290, 387
Sse9I AATT 3 cut(s) 396, 549, 1058
SseBI AGGCCT 1 cut(s) 484
SsiI CCGC 7 cut(s) 24, 92, 108, 111, 208, 266, 1063
SspMI CTAG 2 cut(s) 405, 912
SstI GAGCTC 3 cut(s) 719, 1166, 1205
StuI AGGCCT 1 cut(s) 484
StyD4I CCNGG 6 cut(s) 64, 188, 268, 325, 940, 1068
StyI CCWWGG 1 cut(s) 404
TaaI ACNGT 2 cut(s) 247, 655
TaiI ACGT 1 cut(s) 1120
TaqI TCGA 3 cut(s) 35, 204, 312
TaqII GACCGA 1 cut(s) 132
TasI AATT 3 cut(s) 396, 549, 1058
TauI GCSGC 2 cut(s) 111, 114
TfiI GAWTC 4 cut(s) 37, 185, 521, 1084
Tru1I TTAA 1 cut(s) 644
Tru9I TTAA 1 cut(s) 644
TscAI CASTG 2 cut(s) 121, 241
TseFI GTSAC 3 cut(s) 73, 590, 1118
Tsp45I GTSAC 3 cut(s) 73, 590, 1118
TspDTI ATGAA 7 cut(s) 308, 561, 611, 874, 1013, 1047, 1097
TspRI CASTG 2 cut(s) 121, 241
Tth111I GACNNNGTC 1 cut(s) 1070
Van91I CCANNNNNTGG 2 cut(s) 764, 1146
VneI GTGCAC 1 cut(s) 794
VpaK11BI GGWCC 2 cut(s) 263, 1066
XbaI TCTAGA 1 cut(s) 911
XmaJI CCTAGG 1 cut(s) 404
XmiI GTMKAC 2 cut(s) 128, 676
XmnI GAANNNNTTC 2 cut(s) 618, 753
XspI CTAG 2 cut(s) 405, 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.