Rmu_sc0005139.1_g000016

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005139.1
OG0015697
Physical Location & Seq
Forward (+)
55706 .. 59781
4076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005139.1_g000016.1.cds

Sequence Viewer

Length: 1962 bp
atggcagggtcgtcggcctccggcggtgggccgtcgaatcctccgaaaatccttttggcaaagccgggactggtgaccggcgcgccggtggcgggtaaatatgggcgcggcggcagtggggatgagtatacggcgtcgcttcggtcccgcctcccttctatcggatccctcaacctcctctctgattcctgggagttccacatcgaccgcttcctcccgtttttgactgagaacactgagttcacggtggtgggggtgattggtccgcctggagtcggcaagtccaccattatgaacgagctttacggcttcgatgccacctcacctgggatgctacctccatttgctatagagactgaagaaggtaaagcaatggcaaggcattgtagtgtgggaattgaacctagggtttctgctgaacgccttatacttcttgacactcagccggtttttagtccttctgttttagctgagatgatgaggcctgatggatcatccaccattcctgttctaaatgctgaatctttatcggccgagttagctcatgaacttatgggaattcagcttggtgttcttctgacttccgtctgtcacattattctggttatatcggaaggagttcatgaccataatatgtggcatttaatgtcaacggttgacctattgaaacatggtatacctgatccatcttcacacaccctttctcattctcagagctctaatatagggcctgaaaaagatagcaaggaaaaagttccagaaggtggagagtacatggctatgccagtttttgtgcacacaaaactacgagatcacgatctcagtccacatagtattgtgcaactgaggaaggcacttcaacaatacaccagcacctcttctttcacaagagcaaaaaatgcaaatgtatctagagaacatcctgaaacttctatgactcccggtactgaaagtcatgatcctgcttctcctgtgccaaagttgtatgtaatcccaatgaagagtaaagatgactccccaggagatcaatatgaaagttatacctctatgctatggaaattgcgggaccaggtcttatctatgaatcccccttctttccgaaagactctgactgaacgtgactggttgaagaactctgccaagatatgggaactggtgaagagctctccgattattgcagaatacagcagaacacttcagagctctgctgagatgatgaggcctgatggatcatccaccattcctgttctaaatgctgaatctttatcggccgagttagctcatgaacttatgggaattcagcttggtgttcttctgacttccgtctgtcacattattctggttatatcggaaggagttcatgaccataatatgtggcatttaatgtcaacggttgacctattgaaacatggtatacctgatccatcttcacacaccctttctcattctcagagctctaatatagggcctgaaaaagatagcaaggaaaaagttccagaaggtggagagtacatggctatgccagtttttgtgcacacaaaactacgagatcacgatctcagtccacatagtattgtgcaactgaggaaggcacttcaacaatacaccagcacctcttctttcacaagagcaaaaaatgcaaatgtatctagagaacatcctgaaacttctatgactcccggtactgaaagtcatgatcctgcttctcctgtgccaaagttgtatgtaatcccaatgaagagtaaagatgactccccaggagatcaatatgaaagttatacctctatgctatggaaattgcgggaccaggtcttatctatgaatcccccttctttccgaaagactctgactgaacgtgactggttgaagaactctgccaagatatgggaactggtgaagagctctccgattattgcagaatacagcagaacacttcagagctctggtatgtttaggaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

653

Amino Acids

71.8

Weight (kDa)

6.22

Isoelectric Point (pI)

55.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015697)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g33920 FvH4_7g33920
malus_domestica MD07G1308500.v1.1
prunus_persica Prupe.2G325700_v2.0.a1
pyrus_communis pycom07g28070
rosa_chinensis RchiOBHm_Chr1g0384131
rosa_laevigata RLG00000026069
rosa_multiflora Rmu_sc0005139.1_g000016 Rmu_sc0014419.1_g000001
rosa_roxburghii Rroxscaffold_4G00276960
rosa_rugosa Rorug01G0445100
rosa_samantha Rh1AG470600 Rh1BG428000 Rh1CG440700 Rh1DG461000
rosa_wichuraiana Rw1G040210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 4 cut(s) 764, 1146, 1502, 1884
AccI GTMKAC 3 cut(s) 128, 676, 1414
AccII CGCG 2 cut(s) 83, 108
AciI CCGC 9 cut(s) 24, 92, 108, 111, 148, 208, 266, 1063, 1801
AclWI GGATC 8 cut(s) 159, 172, 499, 677, 953, 1237, 1415, 1691
AcoI YGGCCR 2 cut(s) 531, 1269
AcsI RAATTY 2 cut(s) 558, 1296
AcuI CTGAAG 3 cut(s) 378, 1181, 1919
AcyI GRCGYC 1 cut(s) 134
AfaI GTAC 4 cut(s) 773, 946, 1511, 1684
AfiI CCNNNNNNNGG 9 cut(s) 27, 92, 161, 275, 327, 764, 1146, 1502, 1884
AgsI TTSAA 7 cut(s) 401, 667, 860, 1129, 1405, 1598, 1867
AjnI CCWGG 7 cut(s) 188, 268, 325, 1018, 1068, 1756, 1806
AjuI GAANNNNNNNTTGG 2 cut(s) 38, 70
AleI CACNNNNGTG 1 cut(s) 248
Alw21I GWGCWC 8 cut(s) 719, 798, 1166, 1205, 1457, 1536, 1904, 1943
Alw26I GTCTC 1 cut(s) 347
Alw44I GTGCAC 2 cut(s) 794, 1532
AlwI GGATC 8 cut(s) 159, 172, 499, 677, 953, 1237, 1415, 1691
AoxI GGCC 8 cut(s) 15, 29, 482, 531, 728, 1220, 1269, 1466
ApaLI GTGCAC 2 cut(s) 794, 1532
ApoI RAATTY 2 cut(s) 558, 1296
AscI GGCGCGCC 1 cut(s) 81
Asp700I GAANNNNTTC 4 cut(s) 618, 753, 1356, 1491
AspA2I CCTAGG 1 cut(s) 404
AspLEI GCGC 3 cut(s) 83, 85, 108
AspS9I GGNCC 7 cut(s) 29, 144, 263, 728, 1066, 1466, 1804
AsuC2I CCSGG 3 cut(s) 66, 942, 1680
AsuHPI GGTGA 5 cut(s) 85, 268, 315, 1168, 1906
AvaII GGWCC 4 cut(s) 144, 263, 1066, 1804
AvrII CCTAGG 1 cut(s) 404
BaeGI GKGCMC 2 cut(s) 798, 1536
BamHI GGATCC 1 cut(s) 164
BanII GRGCYC 6 cut(s) 719, 1166, 1205, 1457, 1904, 1943
Bbv12I GWGCWC 8 cut(s) 719, 798, 1166, 1205, 1457, 1536, 1904, 1943
BccI CCATC 4 cut(s) 482, 694, 1220, 1432
BceAI ACGGC 3 cut(s) 16, 147, 322
BcgI CGANNNNNNTGC 1 cut(s) 28
BciT130I CCWGG 7 cut(s) 190, 270, 327, 1020, 1070, 1758, 1808
BcnI CCSGG 3 cut(s) 66, 942, 1680
BcoDI GTCTC 1 cut(s) 347
BfaI CTAG 3 cut(s) 405, 912, 1650
BfmI CTRYAG 1 cut(s) 348
BisI GCNGC 2 cut(s) 109, 112
BlnI CCTAGG 1 cut(s) 404
BlsI GCNGC 2 cut(s) 110, 113
Bme18I GGWCC 4 cut(s) 144, 263, 1066, 1804
BmgT120I GGNCC 7 cut(s) 29, 144, 263, 728, 1066, 1466, 1804
BmiI GGNNCC 4 cut(s) 146, 166, 1067, 1805
BmsI GCATC 2 cut(s) 304, 321
BoxI GACNNNNGTC 2 cut(s) 584, 1322
BpmI CTGGAG 1 cut(s) 291
BpuMI CCSGG 3 cut(s) 66, 942, 1680
BsaBI GATNNNNATC 2 cut(s) 816, 1554
BsaHI GRCGYC 1 cut(s) 134
BsaJI CCNNGG 5 cut(s) 189, 326, 404, 1018, 1756
Bsc4I CCNNNNNNNGG 9 cut(s) 27, 92, 161, 275, 327, 764, 1146, 1502, 1884
Bse118I RCCGGY 3 cut(s) 77, 85, 445
Bse1I ACTGG 7 cut(s) 75, 785, 1127, 1158, 1523, 1865, 1896
Bse3DI GCAATG 1 cut(s) 378
Bse8I GATNNNNATC 2 cut(s) 816, 1554
BseBI CCWGG 7 cut(s) 190, 270, 327, 1020, 1070, 1758, 1808
BseDI CCNNGG 5 cut(s) 189, 326, 404, 1018, 1756
BseGI GGATG 6 cut(s) 127, 336, 494, 919, 1232, 1657
BseJI GATNNNNATC 2 cut(s) 816, 1554
BseLI CCNNNNNNNGG 9 cut(s) 27, 92, 161, 275, 327, 764, 1146, 1502, 1884
BseMI GCAATG 1 cut(s) 378
BseNI ACTGG 7 cut(s) 75, 785, 1127, 1158, 1523, 1865, 1896
BsePI GCGCGC 1 cut(s) 81
BseRI GAGGAG 1 cut(s) 167
BseSI GKGCMC 2 cut(s) 798, 1536
BseX3I CGGCCG 2 cut(s) 531, 1269
Bsh1236I CGCG 2 cut(s) 83, 108
Bsh1285I CGRYCG 3 cut(s) 208, 534, 1272
BshFI GGCC 8 cut(s) 17, 31, 484, 533, 730, 1222, 1271, 1468
BsiEI CGRYCG 3 cut(s) 208, 534, 1272
BsiHKAI GWGCWC 8 cut(s) 719, 798, 1166, 1205, 1457, 1536, 1904, 1943
BsiSI CCGG 7 cut(s) 21, 65, 78, 86, 446, 942, 1680
BslFI GGGAC 4 cut(s) 81, 130, 1079, 1817
BslI CCNNNNNNNGG 9 cut(s) 27, 92, 161, 275, 327, 764, 1146, 1502, 1884
BsmAI GTCTC 1 cut(s) 347
BsmFI GGGAC 4 cut(s) 81, 130, 1079, 1817
BsnI GGCC 8 cut(s) 17, 31, 484, 533, 730, 1222, 1271, 1468
Bsp1286I GDGCHC 8 cut(s) 719, 798, 1166, 1205, 1457, 1536, 1904, 1943
BspACI CCGC 9 cut(s) 24, 92, 108, 111, 148, 208, 266, 1063, 1801
BspANI GGCC 8 cut(s) 17, 31, 484, 533, 730, 1222, 1271, 1468
BspFNI CGCG 2 cut(s) 83, 108
BspHI TCATGA 6 cut(s) 544, 622, 955, 1282, 1360, 1693
BspLI GGNNCC 4 cut(s) 146, 166, 1067, 1805
BspPI GGATC 8 cut(s) 159, 172, 499, 677, 953, 1237, 1415, 1691
BspQI GCTCTTC 2 cut(s) 1154, 1892
BsrDI GCAATG 1 cut(s) 378
BsrFI RCCGGY 3 cut(s) 77, 85, 445
BsrI ACTGG 7 cut(s) 75, 785, 1127, 1158, 1523, 1865, 1896
BssAI RCCGGY 3 cut(s) 77, 85, 445
BssECI CCNNGG 5 cut(s) 189, 326, 404, 1018, 1756
BssHII GCGCGC 1 cut(s) 81
BssNAI GTATAC 3 cut(s) 129, 677, 1415
BssNI GRCGYC 1 cut(s) 134
BssT1I CCWWGG 1 cut(s) 404
Bst1107I GTATAC 3 cut(s) 129, 677, 1415
Bst2UI CCWGG 7 cut(s) 190, 270, 327, 1020, 1070, 1758, 1808
Bst4CI ACNGT 3 cut(s) 247, 655, 1393
Bst6I CTCTTC 6 cut(s) 883, 995, 1154, 1621, 1733, 1892
BstACI GRCGYC 1 cut(s) 134
BstAPI GCANNNNNTGC 2 cut(s) 899, 1637
BstC8I GCNNGC 1 cut(s) 83
BstEII GGTNACC 1 cut(s) 73
BstF5I GGATG 6 cut(s) 127, 336, 494, 919, 1232, 1657
BstFNI CGCG 2 cut(s) 83, 108
BstHHI GCGC 3 cut(s) 83, 85, 108
BstMAI GTCTC 1 cut(s) 347
BstMCI CGRYCG 3 cut(s) 208, 534, 1272
BstMWI GCNNNNNNNGC 5 cut(s) 89, 539, 899, 1277, 1637
BstNI CCWGG 7 cut(s) 190, 270, 327, 1020, 1070, 1758, 1808
BstPAI GACNNNNGTC 2 cut(s) 584, 1322
BstPI GGTNACC 1 cut(s) 73
BstSFI CTRYAG 1 cut(s) 348
BstSLI GKGCMC 2 cut(s) 798, 1536
BstUI CGCG 2 cut(s) 83, 108
BstX2I RGATCY 1 cut(s) 164
BstYI RGATCY 1 cut(s) 164
BstZ17I GTATAC 3 cut(s) 129, 677, 1415
BstZI CGGCCG 2 cut(s) 531, 1269
BsuRI GGCC 8 cut(s) 17, 31, 484, 533, 730, 1222, 1271, 1468
BtsCI GGATG 6 cut(s) 127, 336, 494, 919, 1232, 1657
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 2 cut(s) 121, 234
Cac8I GCNNGC 1 cut(s) 83
CciI TCATGA 6 cut(s) 544, 622, 955, 1282, 1360, 1693
CfoI GCGC 3 cut(s) 83, 85, 108
Cfr10I RCCGGY 3 cut(s) 77, 85, 445
Cfr13I GGNCC 7 cut(s) 29, 144, 263, 728, 1066, 1466, 1804
CseI GACGC 1 cut(s) 123
CsiI ACCWGGT 2 cut(s) 1068, 1806
Csp6I GTAC 4 cut(s) 772, 945, 1510, 1683
CviQI GTAC 4 cut(s) 772, 945, 1510, 1683
EaeI YGGCCR 2 cut(s) 531, 1269
EagI CGGCCG 2 cut(s) 531, 1269
Eam1104I CTCTTC 6 cut(s) 883, 995, 1154, 1621, 1733, 1892
EarI CTCTTC 6 cut(s) 883, 995, 1154, 1621, 1733, 1892
EciI GGCGGA 1 cut(s) 255
Ecl136II GAGCTC 6 cut(s) 717, 1164, 1203, 1455, 1902, 1941
EclXI CGGCCG 2 cut(s) 531, 1269
Eco130I CCWWGG 1 cut(s) 404
Eco147I AGGCCT 2 cut(s) 484, 1222
Eco24I GRGCYC 6 cut(s) 719, 1166, 1205, 1457, 1904, 1943
Eco47I GGWCC 4 cut(s) 144, 263, 1066, 1804
Eco52I CGGCCG 2 cut(s) 531, 1269
Eco53kI GAGCTC 6 cut(s) 717, 1164, 1203, 1455, 1902, 1941
Eco57I CTGAAG 3 cut(s) 378, 1181, 1919
Eco91I GGTNACC 1 cut(s) 73
EcoICRI GAGCTC 6 cut(s) 717, 1164, 1203, 1455, 1902, 1941
EcoO109I RGGNCCY 2 cut(s) 728, 1466
EcoO65I GGTNACC 1 cut(s) 73
EcoRI GAATTC 2 cut(s) 558, 1296
EcoRII CCWGG 7 cut(s) 188, 268, 325, 1018, 1068, 1756, 1806
EcoT14I CCWWGG 1 cut(s) 404
EcoT38I GRGCYC 6 cut(s) 719, 1166, 1205, 1457, 1904, 1943
ErhI CCWWGG 1 cut(s) 404
FaqI GGGAC 4 cut(s) 81, 130, 1079, 1817
FauI CCCGC 4 cut(s) 85, 155, 1056, 1794
FblI GTMKAC 3 cut(s) 128, 676, 1414
Fnu4HI GCNGC 2 cut(s) 109, 112
FokI GGATG 6 cut(s) 134, 343, 481, 906, 1219, 1644
FriOI GRGCYC 6 cut(s) 719, 1166, 1205, 1457, 1904, 1943
Fsp4HI GCNGC 2 cut(s) 109, 112
FspBI CTAG 3 cut(s) 405, 912, 1650
GlaI GCGC 3 cut(s) 82, 84, 107
GluI GCNGC 2 cut(s) 109, 112
GsuI CTGGAG 1 cut(s) 291
HaeIII GGCC 8 cut(s) 17, 31, 484, 533, 730, 1222, 1271, 1468
HapII CCGG 7 cut(s) 21, 65, 78, 86, 446, 942, 1680
HgaI GACGC 1 cut(s) 123
HhaI GCGC 3 cut(s) 83, 85, 108
Hin1I GRCGYC 1 cut(s) 134
Hin6I GCGC 3 cut(s) 81, 83, 106
HinP1I GCGC 3 cut(s) 81, 83, 106
HincII GTYRAC 4 cut(s) 651, 658, 1389, 1396
HindII GTYRAC 4 cut(s) 651, 658, 1389, 1396
HpaII CCGG 7 cut(s) 21, 65, 78, 86, 446, 942, 1680
HphI GGTGA 5 cut(s) 85, 268, 315, 1168, 1906
Hpy99I CGWCG 3 cut(s) 16, 37, 139
HpyCH4III ACNGT 3 cut(s) 247, 655, 1393
HpyCH4IV ACGT 2 cut(s) 1117, 1855
HpyCH4V TGCA 8 cut(s) 796, 841, 902, 1178, 1534, 1579, 1640, 1916
HpyF10VI GCNNNNNNNGC 5 cut(s) 89, 539, 899, 1277, 1637
HpySE526I ACGT 2 cut(s) 1117, 1855
Hsp92I GRCGYC 1 cut(s) 134
HspAI GCGC 3 cut(s) 81, 83, 106
LguI GCTCTTC 2 cut(s) 1154, 1892
LweI GCATC 2 cut(s) 304, 321
MabI ACCWGGT 2 cut(s) 1068, 1806
MaeI CTAG 3 cut(s) 405, 912, 1650
MaeII ACGT 2 cut(s) 1117, 1855
MaeIII GTNAC 5 cut(s) 73, 590, 1118, 1328, 1856
MflI RGATCY 1 cut(s) 164
MhlI GDGCHC 8 cut(s) 719, 798, 1166, 1205, 1457, 1536, 1904, 1943
MluCI AATT 5 cut(s) 396, 558, 1058, 1296, 1796
MlyI GAGTC 7 cut(s) 282, 931, 1007, 1099, 1669, 1745, 1837
MroXI GAANNNNTTC 4 cut(s) 618, 753, 1356, 1491
MseI TTAA 2 cut(s) 644, 1382
MslI CAYNNNNRTG 5 cut(s) 248, 290, 387, 779, 1517
MspI CCGG 7 cut(s) 21, 65, 78, 86, 446, 942, 1680
MvaI CCWGG 7 cut(s) 190, 270, 327, 1020, 1070, 1758, 1808
MvnI CGCG 2 cut(s) 83, 108
MwoI GCNNNNNNNGC 5 cut(s) 89, 539, 899, 1277, 1637
NciI CCSGG 3 cut(s) 66, 942, 1680
NlaIV GGNNCC 4 cut(s) 146, 166, 1067, 1805
NmeAIII GCCGAG 2 cut(s) 559, 1297
NmuCI GTSAC 5 cut(s) 73, 590, 1118, 1328, 1856
OliI CACNNNNGTG 1 cut(s) 248
PagI TCATGA 6 cut(s) 544, 622, 955, 1282, 1360, 1693
PalAI GGCGCGCC 1 cut(s) 81
PauI GCGCGC 1 cut(s) 81
PceI AGGCCT 2 cut(s) 484, 1222
PciSI GCTCTTC 2 cut(s) 1154, 1892
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PdmI GAANNNNTTC 4 cut(s) 618, 753, 1356, 1491
PfeI GAWTC 6 cut(s) 37, 185, 521, 1084, 1259, 1822
PflFI GACNNNGTC 2 cut(s) 1070, 1808
PflMI CCANNNNNTGG 4 cut(s) 764, 1146, 1502, 1884
PkrI GCNGC 2 cut(s) 110, 113
PleI GAGTC 7 cut(s) 281, 931, 1007, 1099, 1669, 1745, 1837
PpsI GAGTC 7 cut(s) 281, 931, 1007, 1099, 1669, 1745, 1837
PshAI GACNNNNGTC 2 cut(s) 584, 1322
Psp124BI GAGCTC 6 cut(s) 719, 1166, 1205, 1457, 1904, 1943
Psp6I CCWGG 7 cut(s) 188, 268, 325, 1018, 1068, 1756, 1806
PspEI GGTNACC 1 cut(s) 73
PspGI CCWGG 7 cut(s) 188, 268, 325, 1018, 1068, 1756, 1806
PspN4I GGNNCC 4 cut(s) 146, 166, 1067, 1805
PspPI GGNCC 7 cut(s) 29, 144, 263, 728, 1066, 1466, 1804
PsrI GAACNNNNNNTAC 4 cut(s) 287, 319, 411, 443
PsuI RGATCY 1 cut(s) 164
PsyI GACNNNGTC 2 cut(s) 1070, 1808
PteI GCGCGC 1 cut(s) 81
RsaI GTAC 4 cut(s) 773, 946, 1511, 1684
RsaNI GTAC 4 cut(s) 772, 945, 1510, 1683
RseI CAYNNNNRTG 5 cut(s) 248, 290, 387, 779, 1517
SacI GAGCTC 6 cut(s) 719, 1166, 1205, 1457, 1904, 1943
SapI GCTCTTC 2 cut(s) 1154, 1892
SaqAI TTAA 2 cut(s) 644, 1382
SatI GCNGC 2 cut(s) 109, 112
Sau96I GGNCC 7 cut(s) 29, 144, 263, 728, 1066, 1466, 1804
SchI GAGTC 7 cut(s) 282, 931, 1007, 1099, 1669, 1745, 1837
SduI GDGCHC 8 cut(s) 719, 798, 1166, 1205, 1457, 1536, 1904, 1943
SexAI ACCWGGT 2 cut(s) 1068, 1806
SfaNI GCATC 2 cut(s) 304, 321
SfcI CTRYAG 1 cut(s) 348
SgrAI CRCCGGYG 1 cut(s) 85
SgsI GGCGCGCC 1 cut(s) 81
SinI GGWCC 4 cut(s) 144, 263, 1066, 1804
SmiMI CAYNNNNRTG 5 cut(s) 248, 290, 387, 779, 1517
Sse9I AATT 5 cut(s) 396, 558, 1058, 1296, 1796
SseBI AGGCCT 2 cut(s) 484, 1222
SsiI CCGC 9 cut(s) 24, 92, 108, 111, 148, 208, 266, 1063, 1801
SspMI CTAG 3 cut(s) 405, 912, 1650
SstI GAGCTC 6 cut(s) 719, 1166, 1205, 1457, 1904, 1943
StuI AGGCCT 2 cut(s) 484, 1222
StyI CCWWGG 1 cut(s) 404
TaaI ACNGT 3 cut(s) 247, 655, 1393
TaiI ACGT 2 cut(s) 1120, 1858
TaqI TCGA 3 cut(s) 35, 204, 312
TaqII GACCGA 1 cut(s) 132
TasI AATT 5 cut(s) 396, 558, 1058, 1296, 1796
TatI WGTACW 2 cut(s) 771, 1509
TauI GCSGC 2 cut(s) 111, 114
TfiI GAWTC 6 cut(s) 37, 185, 521, 1084, 1259, 1822
Tru1I TTAA 2 cut(s) 644, 1382
Tru9I TTAA 2 cut(s) 644, 1382
TscAI CASTG 2 cut(s) 121, 241
TseFI GTSAC 5 cut(s) 73, 590, 1118, 1328, 1856
Tsp45I GTSAC 5 cut(s) 73, 590, 1118, 1328, 1856
TspGWI ACGGA 2 cut(s) 574, 1312
TspRI CASTG 2 cut(s) 121, 241
Tth111I GACNNNGTC 2 cut(s) 1070, 1808
Van91I CCANNNNNTGG 4 cut(s) 764, 1146, 1502, 1884
VneI GTGCAC 2 cut(s) 794, 1532
VpaK11BI GGWCC 4 cut(s) 144, 263, 1066, 1804
XapI RAATTY 2 cut(s) 558, 1296
XbaI TCTAGA 2 cut(s) 911, 1649
XmaJI CCTAGG 1 cut(s) 404
XmiI GTMKAC 3 cut(s) 128, 676, 1414
XmnI GAANNNNTTC 4 cut(s) 618, 753, 1356, 1491
XspI CTAG 3 cut(s) 405, 912, 1650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.