RLG00000026069

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0015697
Physical Location & Seq
Forward (+)
338137 .. 340538
2402 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026069

Sequence Viewer

Length: 1344 bp
ATGGCAGGGTCGTCGTCCTCCGGCGGTGGGCCGTCGAATCCTCCGAAAATCCTGTTGGCAAAGCCGGGACTGGTGAGCGGCGCGCCGGTGGCGGGTAAATATGGGCGCGGGGGCAGTGGGGATGAGTATACGGCGTCGCTTCGGTCTCGCCTCCCTTCTATCGGATCCCTCAACCTCCTCTCTGACTCCTGGGAGTTCCACATCGACCGCTTCCTCCCGTTTTTGACTGAGAACACTGAGTTCACGGTGGTGGGGGTGATTGGTCCGCCTGGAGTCGGCAAGTCCACCATTATGAACGAGCTTTACGGCTTCGATGCCACCTCACCTGGGATGCTACCTCCATTTGCTATAGAGACTGAGGAGGGTAAAGCAATGGCAAGGCATTGTAGTGTGGGCATTGAACCTAGGGTTTCGGCCGAACGCCTTATACTTCTTGACACCCAGGTCGTTCTAGTTGCTACCCTGGTTGTTGTAATTTCTATTCTAACCTACAGTTTGCAAATGCTGATGTTTAGTGTTACTGAGTATGATCGAGTTTCCGTTTCTTTTTTTTTTCATTGGCAGCCGGTTTTTAGTCCTTCTGTTTTAGCTGAGATGATGAGGCCTGATGGATCATCCACCATTCCTGTTCTAAATGCTGAATCTTTATCGGCCGAGTTAGCTCATGAAATTATGGGCATTCAGCTTGGTGTTCTTCTGACTTCCATCTGTCACATTATTCTGGTTATATCGGAAGGAGTTCATGACCATATTATGTGGCATTTAATGTCAACGGTTGACCTATTGAAACATGGTATACCTGATCCATCTTCACACACCCTTTCTCATTCTCAGAGCTCTAATATAGGGCCTGAAAAAGATAGCAAGGAAAAAGTTCCAGAAGGTGGAGAGTACATGGCTATGCCAGTTTTTGTGCACACAAAACTACGAGATCACGATCTTAGTCCACATAGTATTGTGCAACTGAGGAAGGCACTTCAACAATACACCAGCACCTCTTCTTTCACAAGAGCAAAAAATGCAAATGTATCTAGAGAACATCCTGAGACTTCTATGGCTCCTGGTACTGAAAGTCATGATCCTGCTTCTCCTGTGCCAAAGTTGTATGTAATCCCAATGAAGAGTAAAGATGACTCCCCAGGAGATCAATATGAAAGTTATACCTCTATGCTATGGAAATTGCGGGACCAGGTCTTATCTATGGATCCCCCTTCTTTCCGAAAGACTCTGACCGAACGTGATTGGTTGAAGAACTCTGCCAAGATATGGGAACTGGTGAAGAGCTCTCCGATTATTGCAGAATACAGCAGAACACTTCAGAGCTCTGGTATGTTTAGGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

448

Amino Acids

49.01

Weight (kDa)

6.06

Isoelectric Point (pI)

55.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015697)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g33920 FvH4_7g33920
malus_domestica MD07G1308500.v1.1
prunus_persica Prupe.2G325700_v2.0.a1
pyrus_communis pycom07g28070
rosa_chinensis RchiOBHm_Chr1g0384131
rosa_laevigata RLG00000026069
rosa_multiflora Rmu_sc0005139.1_g000016 Rmu_sc0014419.1_g000001
rosa_roxburghii Rroxscaffold_4G00276960
rosa_rugosa Rorug01G0445100
rosa_samantha Rh1AG470600 Rh1BG428000 Rh1CG440700 Rh1DG461000
rosa_wichuraiana Rw1G040210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 443
AccB7I CCANNNNNTGG 2 cut(s) 884, 1266
AccBSI CCGCTC 1 cut(s) 78
AccI GTMKAC 2 cut(s) 128, 796
AccII CGCG 2 cut(s) 83, 108
AciI CCGC 7 cut(s) 24, 78, 92, 108, 208, 266, 1183
AclWI GGATC 7 cut(s) 159, 172, 619, 797, 1073, 1199, 1212
AcoI YGGCCR 2 cut(s) 414, 651
AcuI CTGAAG 1 cut(s) 1301
AcyI GRCGYC 1 cut(s) 134
AfaI GTAC 2 cut(s) 893, 1066
AfiI CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 884, 1266
AgsI TTSAA 4 cut(s) 401, 787, 980, 1249
AjnI CCWGG 8 cut(s) 188, 268, 325, 441, 462, 1060, 1138, 1188
AjuI GAANNNNNNNTTGG 2 cut(s) 38, 70
AleI CACNNNNGTG 1 cut(s) 248
AluBI AGCT 7 cut(s) 301, 590, 662, 685, 837, 1284, 1323
AluI AGCT 7 cut(s) 301, 590, 662, 685, 837, 1284, 1323
Alw21I GWGCWC 4 cut(s) 839, 918, 1286, 1325
Alw26I GTCTC 3 cut(s) 150, 347, 1040
Alw44I GTGCAC 1 cut(s) 914
AlwI GGATC 7 cut(s) 159, 172, 619, 797, 1073, 1199, 1212
AoxI GGCC 5 cut(s) 29, 414, 602, 651, 848
ApaLI GTGCAC 1 cut(s) 914
ApeKI GCWGC 1 cut(s) 562
AscI GGCGCGCC 1 cut(s) 81
Asp700I GAANNNNTTC 2 cut(s) 738, 873
AspA2I CCTAGG 1 cut(s) 404
AspLEI GCGC 3 cut(s) 83, 85, 108
AspS9I GGNCC 4 cut(s) 29, 263, 848, 1186
AsuC2I CCSGG 1 cut(s) 66
AsuHPI GGTGA 4 cut(s) 85, 268, 315, 1288
AvaII GGWCC 2 cut(s) 263, 1186
AvrII CCTAGG 1 cut(s) 404
BaeGI GKGCMC 1 cut(s) 918
BamHI GGATCC 2 cut(s) 164, 1204
BanII GRGCYC 3 cut(s) 839, 1286, 1325
Bbv12I GWGCWC 4 cut(s) 839, 918, 1286, 1325
BbvI GCAGC 1 cut(s) 574
BccI CCATC 3 cut(s) 602, 713, 814
BceAI ACGGC 3 cut(s) 16, 147, 322
BcgI CGANNNNNNTGC 1 cut(s) 28
BciT130I CCWGG 8 cut(s) 190, 270, 327, 443, 464, 1062, 1140, 1190
BcnI CCSGG 1 cut(s) 66
BcoDI GTCTC 3 cut(s) 150, 347, 1040
BfaI CTAG 3 cut(s) 405, 452, 1032
BfmI CTRYAG 2 cut(s) 348, 490
BisI GCNGC 2 cut(s) 79, 563
BlnI CCTAGG 1 cut(s) 404
BlsI GCNGC 2 cut(s) 80, 564
Bme1390I CCNGG 9 cut(s) 66, 190, 270, 327, 443, 464, 1062, 1140, 1190
Bme18I GGWCC 2 cut(s) 263, 1186
BmgT120I GGNCC 4 cut(s) 29, 263, 848, 1186
BmiI GGNNCC 4 cut(s) 166, 1059, 1187, 1206
BmrFI CCNGG 9 cut(s) 66, 190, 270, 327, 443, 464, 1062, 1140, 1190
BmsI GCATC 2 cut(s) 304, 321
BpmI CTGGAG 1 cut(s) 291
BpuMI CCSGG 1 cut(s) 66
BsaBI GATNNNNATC 1 cut(s) 936
BsaHI GRCGYC 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 150
BsaJI CCNNGG 6 cut(s) 189, 326, 404, 441, 462, 1138
Bsc4I CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 884, 1266
Bse118I RCCGGY 2 cut(s) 85, 565
Bse1I ACTGG 3 cut(s) 75, 905, 1278
Bse3DI GCAATG 1 cut(s) 378
Bse8I GATNNNNATC 1 cut(s) 936
BseBI CCWGG 8 cut(s) 190, 270, 327, 443, 464, 1062, 1140, 1190
BseDI CCNNGG 6 cut(s) 189, 326, 404, 441, 462, 1138
BseGI GGATG 4 cut(s) 127, 336, 614, 1039
BseJI GATNNNNATC 1 cut(s) 936
BseLI CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 884, 1266
BseMI GCAATG 1 cut(s) 378
BseMII CTCAG 8 cut(s) 219, 228, 348, 513, 582, 845, 956, 1035
BseNI ACTGG 3 cut(s) 75, 905, 1278
BsePI GCGCGC 1 cut(s) 81
BseRI GAGGAG 2 cut(s) 167, 374
BseSI GKGCMC 1 cut(s) 918
BseX3I CGGCCG 2 cut(s) 414, 651
BseXI GCAGC 1 cut(s) 574
Bsh1236I CGCG 2 cut(s) 83, 108
Bsh1285I CGRYCG 3 cut(s) 208, 417, 654
BshFI GGCC 5 cut(s) 31, 416, 604, 653, 850
BsiEI CGRYCG 3 cut(s) 208, 417, 654
BsiHKAI GWGCWC 4 cut(s) 839, 918, 1286, 1325
BsiSI CCGG 4 cut(s) 21, 65, 86, 566
BslFI GGGAC 2 cut(s) 81, 1199
BslI CCNNNNNNNGG 7 cut(s) 27, 92, 161, 275, 327, 884, 1266
BsmAI GTCTC 3 cut(s) 150, 347, 1040
BsmFI GGGAC 2 cut(s) 81, 1199
BsmI GAATGC 1 cut(s) 678
BsnI GGCC 5 cut(s) 31, 416, 604, 653, 850
Bso31I GGTCTC 1 cut(s) 150
Bsp1286I GDGCHC 4 cut(s) 839, 918, 1286, 1325
Bsp143I GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
BspACI CCGC 7 cut(s) 24, 78, 92, 108, 208, 266, 1183
BspANI GGCC 5 cut(s) 31, 416, 604, 653, 850
BspCNI CTCAG 8 cut(s) 220, 229, 349, 514, 583, 844, 957, 1036
BspFNI CGCG 2 cut(s) 83, 108
BspHI TCATGA 3 cut(s) 664, 742, 1075
BspLI GGNNCC 4 cut(s) 166, 1059, 1187, 1206
BspPI GGATC 7 cut(s) 159, 172, 619, 797, 1073, 1199, 1212
BspQI GCTCTTC 1 cut(s) 1274
BspTNI GGTCTC 1 cut(s) 150
BsrBI CCGCTC 1 cut(s) 78
BsrDI GCAATG 1 cut(s) 378
BsrFI RCCGGY 2 cut(s) 85, 565
BsrI ACTGG 3 cut(s) 75, 905, 1278
BssAI RCCGGY 2 cut(s) 85, 565
BssECI CCNNGG 6 cut(s) 189, 326, 404, 441, 462, 1138
BssHII GCGCGC 1 cut(s) 81
BssMI GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
BssNAI GTATAC 2 cut(s) 129, 797
BssNI GRCGYC 1 cut(s) 134
BssT1I CCWWGG 1 cut(s) 404
Bst1107I GTATAC 2 cut(s) 129, 797
Bst2UI CCWGG 8 cut(s) 190, 270, 327, 443, 464, 1062, 1140, 1190
Bst4CI ACNGT 3 cut(s) 247, 494, 775
Bst6I CTCTTC 3 cut(s) 1003, 1115, 1274
BstACI GRCGYC 1 cut(s) 134
BstAPI GCANNNNNTGC 1 cut(s) 1019
BstC8I GCNNGC 1 cut(s) 83
BstDEI CTNAG 9 cut(s) 228, 237, 357, 522, 591, 831, 941, 965, 1044
BstF5I GGATG 4 cut(s) 127, 336, 614, 1039
BstFNI CGCG 2 cut(s) 83, 108
BstHHI GCGC 3 cut(s) 83, 85, 108
BstKTI GATC 9 cut(s) 167, 532, 614, 805, 934, 940, 1081, 1147, 1207
BstMAI GTCTC 3 cut(s) 150, 347, 1040
BstMBI GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
BstMCI CGRYCG 3 cut(s) 208, 417, 654
BstMWI GCNNNNNNNGC 3 cut(s) 89, 659, 1019
BstNI CCWGG 8 cut(s) 190, 270, 327, 443, 464, 1062, 1140, 1190
BstSCI CCNGG 9 cut(s) 64, 188, 268, 325, 441, 462, 1060, 1138, 1188
BstSFI CTRYAG 2 cut(s) 348, 490
BstSLI GKGCMC 1 cut(s) 918
BstUI CGCG 2 cut(s) 83, 108
BstV1I GCAGC 1 cut(s) 574
BstX2I RGATCY 2 cut(s) 164, 1204
BstYI RGATCY 2 cut(s) 164, 1204
BstZ17I GTATAC 2 cut(s) 129, 797
BstZI CGGCCG 2 cut(s) 414, 651
BsuRI GGCC 5 cut(s) 31, 416, 604, 653, 850
BtsCI GGATG 4 cut(s) 127, 336, 614, 1039
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 2 cut(s) 121, 234
Cac8I GCNNGC 1 cut(s) 83
CciI TCATGA 3 cut(s) 664, 742, 1075
CfoI GCGC 3 cut(s) 83, 85, 108
Cfr10I RCCGGY 2 cut(s) 85, 565
Cfr13I GGNCC 4 cut(s) 29, 263, 848, 1186
CseI GACGC 1 cut(s) 123
CsiI ACCWGGT 1 cut(s) 1188
Csp6I GTAC 2 cut(s) 892, 1065
CviAII CATG 5 cut(s) 665, 743, 791, 895, 1076
CviQI GTAC 2 cut(s) 892, 1065
DdeI CTNAG 9 cut(s) 228, 237, 357, 522, 591, 831, 941, 965, 1044
DpnI GATC 9 cut(s) 166, 531, 613, 804, 933, 939, 1080, 1146, 1206
DpnII GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
DrdI GACNNNNNNGTC 1 cut(s) 443
DseDI GACNNNNNNGTC 1 cut(s) 443
EaeI YGGCCR 2 cut(s) 414, 651
EagI CGGCCG 2 cut(s) 414, 651
Eam1104I CTCTTC 3 cut(s) 1003, 1115, 1274
EarI CTCTTC 3 cut(s) 1003, 1115, 1274
EciI GGCGGA 1 cut(s) 255
Ecl136II GAGCTC 3 cut(s) 837, 1284, 1323
EclXI CGGCCG 2 cut(s) 414, 651
Eco130I CCWWGG 1 cut(s) 404
Eco147I AGGCCT 1 cut(s) 604
Eco24I GRGCYC 3 cut(s) 839, 1286, 1325
Eco31I GGTCTC 1 cut(s) 150
Eco47I GGWCC 2 cut(s) 263, 1186
Eco52I CGGCCG 2 cut(s) 414, 651
Eco53kI GAGCTC 3 cut(s) 837, 1284, 1323
Eco57I CTGAAG 1 cut(s) 1301
EcoICRI GAGCTC 3 cut(s) 837, 1284, 1323
EcoO109I RGGNCCY 1 cut(s) 848
EcoRII CCWGG 8 cut(s) 188, 268, 325, 441, 462, 1060, 1138, 1188
EcoT14I CCWWGG 1 cut(s) 404
EcoT38I GRGCYC 3 cut(s) 839, 1286, 1325
ErhI CCWWGG 1 cut(s) 404
FaeI CATG 5 cut(s) 668, 746, 794, 898, 1079
FaqI GGGAC 2 cut(s) 81, 1199
FatI CATG 5 cut(s) 664, 742, 790, 894, 1075
FauI CCCGC 3 cut(s) 85, 101, 1176
FblI GTMKAC 2 cut(s) 128, 796
Fnu4HI GCNGC 2 cut(s) 79, 563
FokI GGATG 4 cut(s) 134, 343, 601, 1026
FriOI GRGCYC 3 cut(s) 839, 1286, 1325
Fsp4HI GCNGC 2 cut(s) 79, 563
FspBI CTAG 3 cut(s) 405, 452, 1032
GlaI GCGC 3 cut(s) 82, 84, 107
GluI GCNGC 2 cut(s) 79, 563
GsuI CTGGAG 1 cut(s) 291
HaeIII GGCC 5 cut(s) 31, 416, 604, 653, 850
HapII CCGG 4 cut(s) 21, 65, 86, 566
HgaI GACGC 1 cut(s) 123
HhaI GCGC 3 cut(s) 83, 85, 108
Hin1I GRCGYC 1 cut(s) 134
Hin1II CATG 5 cut(s) 668, 746, 794, 898, 1079
Hin6I GCGC 3 cut(s) 81, 83, 106
HinP1I GCGC 3 cut(s) 81, 83, 106
HincII GTYRAC 2 cut(s) 771, 778
HindII GTYRAC 2 cut(s) 771, 778
HinfI GANTC 6 cut(s) 37, 185, 273, 641, 1133, 1225
HpaII CCGG 4 cut(s) 21, 65, 86, 566
HphI GGTGA 4 cut(s) 85, 268, 315, 1288
Hpy166II GTNNAC 8 cut(s) 129, 243, 285, 771, 778, 797, 916, 947
Hpy188III TCNNGA 8 cut(s) 434, 665, 743, 878, 935, 1032, 1043, 1076
Hpy8I GTNNAC 8 cut(s) 129, 243, 285, 771, 778, 797, 916, 947
Hpy99I CGWCG 3 cut(s) 16, 37, 139
HpyAV CCTTC 6 cut(s) 165, 588, 728, 875, 964, 1221
HpyCH4III ACNGT 3 cut(s) 247, 494, 775
HpyCH4IV ACGT 1 cut(s) 1237
HpyCH4V TGCA 5 cut(s) 499, 916, 961, 1022, 1298
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 659, 1019
HpyF3I CTNAG 9 cut(s) 228, 237, 357, 522, 591, 831, 941, 965, 1044
HpySE526I ACGT 1 cut(s) 1237
Hsp92I GRCGYC 1 cut(s) 134
Hsp92II CATG 5 cut(s) 668, 746, 794, 898, 1079
HspAI GCGC 3 cut(s) 81, 83, 106
Kzo9I GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
LguI GCTCTTC 1 cut(s) 1274
LmnI GCTCC 1 cut(s) 1063
Lsp1109I GCAGC 1 cut(s) 574
LweI GCATC 2 cut(s) 304, 321
MabI ACCWGGT 1 cut(s) 1188
MaeI CTAG 3 cut(s) 405, 452, 1032
MaeII ACGT 1 cut(s) 1237
MaeIII GTNAC 2 cut(s) 517, 710
MalI GATC 9 cut(s) 166, 531, 613, 804, 933, 939, 1080, 1146, 1206
MbiI CCGCTC 1 cut(s) 78
MboI GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
MboII GAAGA 6 cut(s) 686, 801, 990, 1132, 1261, 1291
MflI RGATCY 2 cut(s) 164, 1204
MhlI GDGCHC 4 cut(s) 839, 918, 1286, 1325
MluCI AATT 3 cut(s) 474, 669, 1178
MlyI GAGTC 4 cut(s) 179, 282, 1127, 1219
MroXI GAANNNNTTC 2 cut(s) 738, 873
MseI TTAA 1 cut(s) 764
MslI CAYNNNNRTG 4 cut(s) 248, 290, 387, 899
MspI CCGG 4 cut(s) 21, 65, 86, 566
MspR9I CCNGG 9 cut(s) 66, 190, 270, 327, 443, 464, 1062, 1140, 1190
Mva1269I GAATGC 1 cut(s) 678
MvaI CCWGG 8 cut(s) 190, 270, 327, 443, 464, 1062, 1140, 1190
MvnI CGCG 2 cut(s) 83, 108
MwoI GCNNNNNNNGC 3 cut(s) 89, 659, 1019
NciI CCSGG 1 cut(s) 66
NdeII GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
NlaIII CATG 5 cut(s) 668, 746, 794, 898, 1079
NlaIV GGNNCC 4 cut(s) 166, 1059, 1187, 1206
NmeAIII GCCGAG 1 cut(s) 679
NmuCI GTSAC 1 cut(s) 710
OliI CACNNNNGTG 1 cut(s) 248
PagI TCATGA 3 cut(s) 664, 742, 1075
PalAI GGCGCGCC 1 cut(s) 81
PauI GCGCGC 1 cut(s) 81
PceI AGGCCT 1 cut(s) 604
PciSI GCTCTTC 1 cut(s) 1274
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PctI GAATGC 1 cut(s) 678
PdmI GAANNNNTTC 2 cut(s) 738, 873
PfeI GAWTC 2 cut(s) 37, 641
PflFI GACNNNGTC 1 cut(s) 1190
PflMI CCANNNNNTGG 2 cut(s) 884, 1266
PkrI GCNGC 2 cut(s) 80, 564
PleI GAGTC 4 cut(s) 179, 281, 1127, 1219
PpsI GAGTC 4 cut(s) 179, 281, 1127, 1219
Psp124BI GAGCTC 3 cut(s) 839, 1286, 1325
Psp6I CCWGG 8 cut(s) 188, 268, 325, 441, 462, 1060, 1138, 1188
PspGI CCWGG 8 cut(s) 188, 268, 325, 441, 462, 1060, 1138, 1188
PspN4I GGNNCC 4 cut(s) 166, 1059, 1187, 1206
PspPI GGNCC 4 cut(s) 29, 263, 848, 1186
PsrI GAACNNNNNNTAC 4 cut(s) 287, 319, 411, 443
PsuI RGATCY 2 cut(s) 164, 1204
PsyI GACNNNGTC 1 cut(s) 1190
PteI GCGCGC 1 cut(s) 81
RsaI GTAC 2 cut(s) 893, 1066
RsaNI GTAC 2 cut(s) 892, 1065
RseI CAYNNNNRTG 4 cut(s) 248, 290, 387, 899
SacI GAGCTC 3 cut(s) 839, 1286, 1325
SapI GCTCTTC 1 cut(s) 1274
SaqAI TTAA 1 cut(s) 764
SatI GCNGC 2 cut(s) 79, 563
Sau3AI GATC 9 cut(s) 164, 529, 611, 802, 931, 937, 1078, 1144, 1204
Sau96I GGNCC 4 cut(s) 29, 263, 848, 1186
SchI GAGTC 4 cut(s) 179, 282, 1127, 1219
ScrFI CCNGG 9 cut(s) 66, 190, 270, 327, 443, 464, 1062, 1140, 1190
SduI GDGCHC 4 cut(s) 839, 918, 1286, 1325
SexAI ACCWGGT 1 cut(s) 1188
SfaNI GCATC 2 cut(s) 304, 321
SfcI CTRYAG 2 cut(s) 348, 490
SgrAI CRCCGGYG 1 cut(s) 85
SgsI GGCGCGCC 1 cut(s) 81
SinI GGWCC 2 cut(s) 263, 1186
SmiMI CAYNNNNRTG 4 cut(s) 248, 290, 387, 899
Sse9I AATT 3 cut(s) 474, 669, 1178
SseBI AGGCCT 1 cut(s) 604
SsiI CCGC 7 cut(s) 24, 78, 92, 108, 208, 266, 1183
SspMI CTAG 3 cut(s) 405, 452, 1032
SstI GAGCTC 3 cut(s) 839, 1286, 1325
StuI AGGCCT 1 cut(s) 604
StyD4I CCNGG 9 cut(s) 64, 188, 268, 325, 441, 462, 1060, 1138, 1188
StyI CCWWGG 1 cut(s) 404
TaaI ACNGT 3 cut(s) 247, 494, 775
TaiI ACGT 1 cut(s) 1240
TaqI TCGA 4 cut(s) 35, 204, 312, 532
TaqII GACCGA 2 cut(s) 132, 1247
TasI AATT 3 cut(s) 474, 669, 1178
TatI WGTACW 1 cut(s) 891
TauI GCSGC 1 cut(s) 81
TfiI GAWTC 2 cut(s) 37, 641
Tru1I TTAA 1 cut(s) 764
Tru9I TTAA 1 cut(s) 764
TscAI CASTG 2 cut(s) 121, 241
TseFI GTSAC 1 cut(s) 710
TseI GCWGC 1 cut(s) 562
Tsp45I GTSAC 1 cut(s) 710
TspDTI ATGAA 6 cut(s) 308, 545, 681, 731, 1133, 1167
TspGWI ACGGA 1 cut(s) 529
TspRI CASTG 2 cut(s) 121, 241
Tth111I GACNNNGTC 1 cut(s) 1190
Van91I CCANNNNNTGG 2 cut(s) 884, 1266
VneI GTGCAC 1 cut(s) 914
VpaK11BI GGWCC 2 cut(s) 263, 1186
XbaI TCTAGA 1 cut(s) 1031
XmaJI CCTAGG 1 cut(s) 404
XmiI GTMKAC 2 cut(s) 128, 796
XmnI GAANNNNTTC 2 cut(s) 738, 873
XspI CTAG 3 cut(s) 405, 452, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.