Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0006851

Physical Location & Seq

Genomic Coordinates Forward (+)

6776988 .. 6781730

Gene Structure 4743 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1039600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGGTTGGCTTAGCAAGATTTTTAAAGGCTCGAGCCACAAAATATCGGAGGAGCATTGTCATGACAACAGTGGCGAGGATCCAGATAGCCATGAACCTTCTTGTTCAGGGGAGGTCTGGTCAGAAAATGAGAATGAAGATATAGATCGTGCAATTGCGCTCTCTCTTTTAGAAGAAAACCAAAAAGGGAAAAATGTGGTTGGTTCTGATTCTCAGTTGCAAGAAGATGAACAACTTGCCAGAGTCATACAAGAAAGTCTGAATGCGGAGTCTCCTCCTCGACATGGAAATGGAAATGGAAATACATATCAACCTATCCCTCCTATCCCTCCTCCCCGACATGGAAATGGAAATGGAAATACATATCAACCTATCACTCCTCCCCGATATGGAAATGGAAGTTCATATCCTATCCCCATGTACTACCCAATGGGCTCCAGGGTTTGTGCTGGTTGCAATGCTGAGATCGGTTTTGGACGATATTTAAATTGCATGAATGCAGTTTGGCATCCAGAATGTTTCCGCTGTCGTGCATGCAACCAACCAATTTCTGATTATGAGTTTTCTACATCTGGGCATTATCCTTACCATAAAGCTTGCTACAAGGAGAGCTACCATCCAAAATGTGATGTTTGCAAGCATTTTATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACATCCATTTTGGGTCCAAAAATACTGCCCTGCTCATGAAATTGATAATACTCCTCGGTGCGGCAGTTGTGAGCGAATGGAGGCCCGAGACACAAGATATGTACCCCTTGATGATGGTCGGAAGCTCTGTCTAGAGTGTCTGGATTCTGCAGTCATGGATACCAGTGAATGCCAACCCTTATATCTCGATATTCAAGAATTTTATGAAGGTTTAAATATGAAGTTGGAGCAGCAAGTTCCACTACTCTTGGTTGAAAGACAAGCGCTAAATGACGCAAGAGGAGGAGAAAGAAATGGCCATTATCACATGCCTGAGACTAGAGGGCTTTGCCTTTCTGAGGAACAAACTATTAGCAAGATTTCAAGGCGGCCACGGTTTGGGGCAGGACACCAAGCTGCGGAATTGATAACAGAGCCCTACAAGCTGACTCGTCGCTGTGAGGTGACTGCAATTCTAATCTTATATGGTCTTCCAAGGTTGCTGACTGGGTCTATTCTAGCTCACGAGATGATGCATGCATGGCTGCGGCTTAAAGGTTACCGACCTCTTAGTCAAGATGTCGAAGAAGGTATCTGTCAAGTTTTAGCTCATATGTGGCTAGAGGCCGAGCTTATGTCTGGCTCAGGCGGCAATGCTGCATCAACCTCGTCTTCCTCCTCTTCCAGGGCATCAAAGAAGGGTACAAGATCACCGCTTGAGAGTAAGCTCGGGGGGTTCTTTTTGCACCAGCTTGAAACAGACATGTCCCCGGTATATGGAGATGGATTCAGGGCCGGTCAACAGGCAGTGCAGAAATACGGGCTTCGAAGTACCCTAGAACATATTAGAATGACAGGGTTGTTTCCTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008285 GO:0009653 GO:0009791 GO:0009908 GO:0010154 GO:0016787 GO:0019538 GO:0022414 GO:0032182 GO:0032501 GO:0032502 GO:0035670 GO:0040008 GO:0042127 GO:0043130 GO:0043170 GO:0044238 GO:0045926 GO:0046620 GO:0046621 GO:0048316 GO:0048317 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048467 GO:0048481 GO:0048482 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0061458 GO:0065007 GO:0071704 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1905392 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DA1-like LIM UIM

Protein Analysis

512

Amino Acids

57.33

Weight (kDa)

5.97

Isoelectric Point (pI)

52.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM	PF00412	149 - 203	2.7e-10	LIM domain
DA1-like	PF12315	298 - 506	9.2e-98	Protein DA1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19270 AT1G19270
fragaria_vesca	FvH4_2g40390 FvH4_2g40390 FvH4_2g40390 FvH4_2g40390
malus_domestica	MD00G1039600.v1.1 MD08G1037200.v1.1
prunus_persica	Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1
pyrus_communis	pycom08g02960 pycom15g02890
rosa_chinensis	RchiOBHm_Chr6g0300341
rosa_laevigata	RLG00000011346
rosa_multiflora	Rmu_sc0001670.1_g000021
rosa_roxburghii	Rroxscaffold_7G00167880
rosa_rugosa	Rorug06G0295000 Rorug06G0295100 Rorug06G0295200 Rorug06G0295200
rosa_samantha	Rh6AG407900 Rh6BG415200 Rh6CG422600 Rh6DG408200
rosa_wichuraiana	Rw6G035670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1233
AccB7I	CCANNNNNTGG	1 cut(s)	1061
AciI	CCGC	8 cut(s)	266, 523, 744, 1051, 1082, 1210, 1311, 1376
AclWI	GGATC	2 cut(s)	74, 87
AcoI	YGGCCR	2 cut(s)	979, 1052
AcsI	RAATTY	1 cut(s)	881
AfaI	GTAC	4 cut(s)	422, 786, 1366, 1495
AfeI	AGCGCT	1 cut(s)	948
AfiI	CCNNNNNNNGG	9 cut(s)	284, 341, 389, 743, 1021, 1061, 1081, 1347, 1439
AflIII	ACRYGT	1 cut(s)	1425
AgsI	TTSAA	5 cut(s)	674, 878, 938, 1047, 1418
AjnI	CCWGG	2 cut(s)	437, 1346
Alw26I	GTCTC	3 cut(s)	276, 765, 992
AlwI	GGATC	2 cut(s)	74, 87
Ama87I	CYCGRG	3 cut(s)	31, 768, 1391
Aor51HI	AGCGCT	1 cut(s)	948
AoxI	GGCC	5 cut(s)	765, 979, 1052, 1287, 1455
ApeKI	GCWGC	4 cut(s)	913, 1079, 1207, 1319
ApoI	RAATTY	1 cut(s)	881
AspLEI	GCGC	2 cut(s)	160, 949
AspS9I	GGNCC	3 cut(s)	697, 766, 1455
AsuC2I	CCSGG	1 cut(s)	1433
AsuHPI	GGTGA	2 cut(s)	1138, 1365
AsuII	TTCGAA	1 cut(s)	1489
AvaI	CYCGRG	3 cut(s)	31, 768, 1391
AvaII	GGWCC	1 cut(s)	697
BaeGI	GKGCMC	1 cut(s)	685
BalI	TGGCCA	1 cut(s)	981
BamHI	GGATCC	1 cut(s)	79
BanII	GRGCYC	2 cut(s)	437, 1101
BauI	CACGAG	1 cut(s)	1187
BbsI	GAAGAC	2 cut(s)	1145, 1326
BbvI	GCAGC	4 cut(s)	925, 1066, 1194, 1306
BccI	CCATC	3 cut(s)	624, 791, 1439
BcgI	CGANNNNNNTGC	2 cut(s)	1311, 1345
BciT130I	CCWGG	2 cut(s)	439, 1348
BciVI	GTATCC	1 cut(s)	835
BcnI	CCSGG	1 cut(s)	1433
BcoDI	GTCTC	3 cut(s)	276, 765, 992
BfaI	CTAG	5 cut(s)	815, 1002, 1181, 1283, 1499
BfmI	CTRYAG	1 cut(s)	831
BfoI	RGCGCY	1 cut(s)	950
BfuI	GTATCC	1 cut(s)	835
BisI	GCNGC	8 cut(s)	745, 914, 1052, 1080, 1208, 1211, 1312, 1320
BlpI	GCTNAGC	1 cut(s)	11
BlsI	GCNGC	8 cut(s)	746, 915, 1053, 1081, 1209, 1212, 1313, 1321
Bme1390I	CCNGG	3 cut(s)	439, 1348, 1433
Bme18I	GGWCC	1 cut(s)	697
BmeT110I	CYCGRG	3 cut(s)	31, 768, 1391
BmgT120I	GGNCC	3 cut(s)	697, 766, 1455
BmiI	GGNNCC	3 cut(s)	81, 436, 698
BmrFI	CCNGG	3 cut(s)	439, 1348, 1433
BmrI	ACTGGG	1 cut(s)	1179
BmsI	GCATC	4 cut(s)	517, 1185, 1331, 1361
BmuI	ACTGGG	1 cut(s)	1179
BpiI	GAAGAC	2 cut(s)	1145, 1326
BpmI	CTGGAG	1 cut(s)	421
Bpu10I	CCTNAGC	1 cut(s)	1306
Bpu1102I	GCTNAGC	1 cut(s)	11
Bpu14I	TTCGAA	1 cut(s)	1489
BpuEI	CTTGAG	1 cut(s)	1400
BpuMI	CCSGG	1 cut(s)	1433
BsaBI	GATNNNNATC	1 cut(s)	144
BsaJI	CCNNGG	6 cut(s)	438, 737, 1055, 1157, 1347, 1431
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	9 cut(s)	284, 341, 389, 743, 1021, 1061, 1081, 1347, 1439
Bse118I	RCCGGY	1 cut(s)	1457
Bse1I	ACTGG	2 cut(s)	846, 1174
Bse3DI	GCAATG	2 cut(s)	463, 1321
Bse8I	GATNNNNATC	1 cut(s)	144
BseBI	CCWGG	2 cut(s)	439, 1348
BseDI	CCNNGG	6 cut(s)	438, 737, 1055, 1157, 1347, 1431
BseGI	GGATG	3 cut(s)	508, 616, 685
BseJI	GATNNNNATC	1 cut(s)	144
BseLI	CCNNNNNNNGG	9 cut(s)	284, 341, 389, 743, 1021, 1061, 1081, 1347, 1439
BseMI	GCAATG	2 cut(s)	463, 1321
BseMII	CTCAG	5 cut(s)	227, 453, 987, 1011, 1320
BseNI	ACTGG	2 cut(s)	846, 1174
BseRI	GAGGAG	9 cut(s)	65, 264, 267, 321, 369, 726, 978, 981, 1330
BseSI	GKGCMC	1 cut(s)	685
BseXI	GCAGC	4 cut(s)	925, 1066, 1194, 1306
BsgI	GTGCAG	1 cut(s)	1493
BshFI	GGCC	5 cut(s)	767, 981, 1054, 1289, 1457
BsiHKCI	CYCGRG	3 cut(s)	31, 768, 1391
BsiSI	CCGG	2 cut(s)	1433, 1458
BslFI	GGGAC	1 cut(s)	1414
BslI	CCNNNNNNNGG	9 cut(s)	284, 341, 389, 743, 1021, 1061, 1081, 1347, 1439
BsmAI	GTCTC	3 cut(s)	276, 765, 992
BsmFI	GGGAC	1 cut(s)	1414
BsmI	GAATGC	3 cut(s)	268, 502, 857
BsnI	GGCC	5 cut(s)	767, 981, 1054, 1289, 1457
BsoBI	CYCGRG	3 cut(s)	31, 768, 1391
Bsp119I	TTCGAA	1 cut(s)	1489
Bsp1286I	GDGCHC	3 cut(s)	437, 685, 1101
Bsp143I	GATC	4 cut(s)	79, 145, 465, 1370
Bsp1720I	GCTNAGC	1 cut(s)	11
BspACI	CCGC	8 cut(s)	266, 523, 744, 1051, 1082, 1210, 1311, 1376
BspANI	GGCC	5 cut(s)	767, 981, 1054, 1289, 1457
BspCNI	CTCAG	5 cut(s)	226, 454, 988, 1012, 1319
BspHI	TCATGA	2 cut(s)	61, 718
BspLI	GGNNCC	3 cut(s)	81, 436, 698
BspMAI	CTGCAG	1 cut(s)	835
BspPI	GGATC	2 cut(s)	74, 87
BspT104I	TTCGAA	1 cut(s)	1489
BsrDI	GCAATG	2 cut(s)	463, 1321
BsrFI	RCCGGY	1 cut(s)	1457
BsrI	ACTGG	2 cut(s)	846, 1174
BssAI	RCCGGY	1 cut(s)	1457
BssECI	CCNNGG	6 cut(s)	438, 737, 1055, 1157, 1347, 1431
BssMI	GATC	4 cut(s)	79, 145, 465, 1370
BssSI	CACGAG	1 cut(s)	1187
BssT1I	CCWWGG	1 cut(s)	1157
Bst2BI	CACGAG	1 cut(s)	1187
Bst2UI	CCWGG	2 cut(s)	439, 1348
Bst4CI	ACNGT	2 cut(s)	71, 1059
Bst6I	CTCTTC	1 cut(s)	1348
BstBI	TTCGAA	1 cut(s)	1489
BstC8I	GCNNGC	4 cut(s)	535, 598, 638, 1200
BstDEI	CTNAG	7 cut(s)	11, 213, 462, 996, 1020, 1232, 1306
BstDSI	CCRYGG	1 cut(s)	1055
BstEII	GGTNACC	1 cut(s)	1220
BstENI	CCTNNNNNAGG	2 cut(s)	1019, 1345
BstF5I	GGATG	3 cut(s)	508, 616, 685
BstH2I	RGCGCY	1 cut(s)	950
BstHHI	GCGC	2 cut(s)	160, 949
BstKTI	GATC	4 cut(s)	82, 148, 468, 1373
BstMAI	GTCTC	3 cut(s)	276, 765, 992
BstMBI	GATC	4 cut(s)	79, 145, 465, 1370
BstMWI	GCNNNNNNNGC	3 cut(s)	1105, 1204, 1311
BstNI	CCWGG	2 cut(s)	439, 1348
BstNSI	RCATGY	4 cut(s)	537, 994, 1202, 1429
BstPI	GGTNACC	1 cut(s)	1220
BstSCI	CCNGG	3 cut(s)	437, 1346, 1431
BstSFI	CTRYAG	1 cut(s)	831
BstSLI	GKGCMC	1 cut(s)	685
BstV1I	GCAGC	4 cut(s)	925, 1066, 1194, 1306
BstV2I	GAAGAC	2 cut(s)	1145, 1326
BstX2I	RGATCY	1 cut(s)	79
BstYI	RGATCY	1 cut(s)	79
BsuI	GTATCC	1 cut(s)	835
BsuRI	GGCC	5 cut(s)	767, 981, 1054, 1289, 1457
BtgI	CCRYGG	1 cut(s)	1055
BtsCI	GGATG	3 cut(s)	508, 616, 685
BtsI	GCAGTG	1 cut(s)	1476
BtsIMutI	CAGTG	3 cut(s)	76, 853, 1476
Cac8I	GCNNGC	4 cut(s)	535, 598, 638, 1200
CciI	TCATGA	2 cut(s)	61, 718
CfoI	GCGC	2 cut(s)	160, 949
Cfr10I	RCCGGY	1 cut(s)	1457
Cfr13I	GGNCC	3 cut(s)	697, 766, 1455
CseI	GACGC	1 cut(s)	965
Csp6I	GTAC	4 cut(s)	421, 785, 1365, 1494
CspCI	CAANNNNNGTGG	2 cut(s)	912, 947
CviQI	GTAC	4 cut(s)	421, 785, 1365, 1494
DdeI	CTNAG	7 cut(s)	11, 213, 462, 996, 1020, 1232, 1306
DpnI	GATC	4 cut(s)	81, 147, 467, 1372
DpnII	GATC	4 cut(s)	79, 145, 465, 1370
DraI	TTTAAA	3 cut(s)	25, 486, 897
DrdI	GACNNNNNNGTC	1 cut(s)	1233
DseDI	GACNNNNNNGTC	1 cut(s)	1233
EaeI	YGGCCR	2 cut(s)	979, 1052
Eam1104I	CTCTTC	1 cut(s)	1348
EarI	CTCTTC	1 cut(s)	1348
Eco130I	CCWWGG	1 cut(s)	1157
Eco24I	GRGCYC	2 cut(s)	437, 1101
Eco47I	GGWCC	1 cut(s)	697
Eco47III	AGCGCT	1 cut(s)	948
Eco88I	CYCGRG	3 cut(s)	31, 768, 1391
Eco91I	GGTNACC	1 cut(s)	1220
EcoNI	CCTNNNNNAGG	2 cut(s)	1019, 1345
EcoO65I	GGTNACC	1 cut(s)	1220
EcoRII	CCWGG	2 cut(s)	437, 1346
EcoT14I	CCWWGG	1 cut(s)	1157
EcoT22I	ATGCAT	2 cut(s)	1200, 1204
EcoT38I	GRGCYC	2 cut(s)	437, 1101
ErhI	CCWWGG	1 cut(s)	1157
FaqI	GGGAC	1 cut(s)	1414
FauNDI	CATATG	1 cut(s)	1275
Fnu4HI	GCNGC	8 cut(s)	745, 914, 1052, 1080, 1208, 1211, 1312, 1320
FokI	GGATG	3 cut(s)	495, 603, 672
FriOI	GRGCYC	2 cut(s)	437, 1101
Fsp4HI	GCNGC	8 cut(s)	745, 914, 1052, 1080, 1208, 1211, 1312, 1320
FspBI	CTAG	5 cut(s)	815, 1002, 1181, 1283, 1499
GlaI	GCGC	2 cut(s)	159, 948
GluI	GCNGC	8 cut(s)	745, 914, 1052, 1080, 1208, 1211, 1312, 1320
GsuI	CTGGAG	1 cut(s)	421
HaeII	RGCGCY	1 cut(s)	950
HaeIII	GGCC	5 cut(s)	767, 981, 1054, 1289, 1457
HapII	CCGG	2 cut(s)	1433, 1458
HgaI	GACGC	1 cut(s)	965
HhaI	GCGC	2 cut(s)	160, 949
Hin6I	GCGC	2 cut(s)	158, 947
HinP1I	GCGC	2 cut(s)	158, 947
HincII	GTYRAC	1 cut(s)	1463
HindII	GTYRAC	1 cut(s)	1463
HindIII	AAGCTT	1 cut(s)	594
HinfI	GANTC	6 cut(s)	209, 243, 269, 827, 1111, 1449
HpaII	CCGG	2 cut(s)	1433, 1458
HphI	GGTGA	2 cut(s)	1138, 1365
Hpy166II	GTNNAC	1 cut(s)	1463
Hpy188I	TCNGA	7 cut(s)	49, 124, 208, 261, 553, 804, 1021
Hpy8I	GTNNAC	1 cut(s)	1463
Hpy99I	CGWCG	1 cut(s)	1119
HpyAV	CCTTC	4 cut(s)	108, 884, 1244, 1354
HpyCH4III	ACNGT	2 cut(s)	71, 1059
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1105, 1204, 1311
HpyF3I	CTNAG	7 cut(s)	11, 213, 462, 996, 1020, 1232, 1306
HspAI	GCGC	2 cut(s)	158, 947
Kzo9I	GATC	4 cut(s)	79, 145, 465, 1370
LmnI	GCTCC	3 cut(s)	52, 440, 910
Lsp1109I	GCAGC	4 cut(s)	925, 1066, 1194, 1306
LweI	GCATC	4 cut(s)	517, 1185, 1331, 1361
MaeI	CTAG	5 cut(s)	815, 1002, 1181, 1283, 1499
MaeIII	GTNAC	2 cut(s)	1126, 1220
MalI	GATC	4 cut(s)	81, 147, 467, 1372
MboI	GATC	4 cut(s)	79, 145, 465, 1370
MboII	GAAGA	7 cut(s)	149, 185, 236, 1145, 1259, 1326, 1335
MfeI	CAATTG	1 cut(s)	153
MflI	RGATCY	1 cut(s)	79
MhlI	GDGCHC	3 cut(s)	437, 685, 1101
MlsI	TGGCCA	1 cut(s)	981
MluCI	AATT	7 cut(s)	153, 487, 546, 723, 881, 1085, 1134
MluNI	TGGCCA	1 cut(s)	981
MlyI	GAGTC	3 cut(s)	252, 278, 1105
MmeI	TCCRAC	3 cut(s)	674, 782, 888
Mox20I	TGGCCA	1 cut(s)	981
Mph1103I	ATGCAT	2 cut(s)	1200, 1204
MscI	TGGCCA	1 cut(s)	981
MseI	TTAA	4 cut(s)	24, 485, 896, 1215
MslI	CAYNNNNRTG	3 cut(s)	60, 288, 345
Msp20I	TGGCCA	1 cut(s)	981
MspA1I	CMGCKG	1 cut(s)	525
MspI	CCGG	2 cut(s)	1433, 1458
MspR9I	CCNGG	3 cut(s)	439, 1348, 1433
MunI	CAATTG	1 cut(s)	153
Mva1269I	GAATGC	3 cut(s)	268, 502, 857
MvaI	CCWGG	2 cut(s)	439, 1348
MwoI	GCNNNNNNNGC	3 cut(s)	1105, 1204, 1311
NciI	CCSGG	1 cut(s)	1433
NdeI	CATATG	1 cut(s)	1275
NdeII	GATC	4 cut(s)	79, 145, 465, 1370
NlaIV	GGNNCC	3 cut(s)	81, 436, 698
NmeAIII	GCCGAG	1 cut(s)	1315
NmuCI	GTSAC	1 cut(s)	1126
NsiI	ATGCAT	2 cut(s)	1200, 1204
NspI	RCATGY	4 cut(s)	537, 994, 1202, 1429
NspV	TTCGAA	1 cut(s)	1489
PaeI	GCATGC	2 cut(s)	537, 1202
PaeR7I	CTCGAG	1 cut(s)	31
PagI	TCATGA	2 cut(s)	61, 718
PciI	ACATGT	1 cut(s)	1425
PctI	GAATGC	3 cut(s)	268, 502, 857
PfeI	GAWTC	3 cut(s)	209, 827, 1449
PflFI	GACNNNGTC	1 cut(s)	1171
PflMI	CCANNNNNTGG	1 cut(s)	1061
PkrI	GCNGC	8 cut(s)	746, 915, 1053, 1081, 1209, 1212, 1313, 1321
PleI	GAGTC	3 cut(s)	251, 277, 1105
PpsI	GAGTC	3 cut(s)	251, 277, 1105
PscI	ACATGT	1 cut(s)	1425
Psp6I	CCWGG	2 cut(s)	437, 1346
PspEI	GGTNACC	1 cut(s)	1220
PspGI	CCWGG	2 cut(s)	437, 1346
PspN4I	GGNNCC	3 cut(s)	81, 436, 698
PspPI	GGNCC	3 cut(s)	697, 766, 1455
PspXI	VCTCGAGB	1 cut(s)	31
PstI	CTGCAG	1 cut(s)	835
PsuI	RGATCY	1 cut(s)	79
PsyI	GACNNNGTC	1 cut(s)	1171
RsaI	GTAC	4 cut(s)	422, 786, 1366, 1495
RsaNI	GTAC	4 cut(s)	421, 785, 1365, 1494
RseI	CAYNNNNRTG	3 cut(s)	60, 288, 345
SaqAI	TTAA	4 cut(s)	24, 485, 896, 1215
SatI	GCNGC	8 cut(s)	745, 914, 1052, 1080, 1208, 1211, 1312, 1320
Sau3AI	GATC	4 cut(s)	79, 145, 465, 1370
Sau96I	GGNCC	3 cut(s)	697, 766, 1455
SchI	GAGTC	3 cut(s)	252, 278, 1105
ScrFI	CCNGG	3 cut(s)	439, 1348, 1433
SduI	GDGCHC	3 cut(s)	437, 685, 1101
SfaNI	GCATC	4 cut(s)	517, 1185, 1331, 1361
SfcI	CTRYAG	1 cut(s)	831
Sfr274I	CTCGAG	1 cut(s)	31
SfuI	TTCGAA	1 cut(s)	1489
SinI	GGWCC	1 cut(s)	697
SlaI	CTCGAG	1 cut(s)	31
SmiI	ATTTAAAT	1 cut(s)	486
SmiMI	CAYNNNNRTG	3 cut(s)	60, 288, 345
SmlI	CTYRAG	2 cut(s)	31, 1379
SmoI	CTYRAG	2 cut(s)	31, 1379
SphI	GCATGC	2 cut(s)	537, 1202
Sse9I	AATT	7 cut(s)	153, 487, 546, 723, 881, 1085, 1134
SsiI	CCGC	8 cut(s)	266, 523, 744, 1051, 1082, 1210, 1311, 1376
SspMI	CTAG	5 cut(s)	815, 1002, 1181, 1283, 1499
StyD4I	CCNGG	3 cut(s)	437, 1346, 1431
StyI	CCWWGG	1 cut(s)	1157
SwaI	ATTTAAAT	1 cut(s)	486
TaaI	ACNGT	2 cut(s)	71, 1059
TaqI	TCGA	5 cut(s)	32, 280, 870, 1245, 1489
TasI	AATT	7 cut(s)	153, 487, 546, 723, 881, 1085, 1134
TatI	WGTACW	1 cut(s)	420
TauI	GCSGC	4 cut(s)	747, 1054, 1213, 1314
TfiI	GAWTC	3 cut(s)	209, 827, 1449
Tru1I	TTAA	4 cut(s)	24, 485, 896, 1215
Tru9I	TTAA	4 cut(s)	24, 485, 896, 1215
TscAI	CASTG	3 cut(s)	76, 853, 1476
TseFI	GTSAC	1 cut(s)	1126
TseI	GCWGC	4 cut(s)	913, 1079, 1207, 1319
Tsp45I	GTSAC	1 cut(s)	1126
TspDTI	ATGAA	8 cut(s)	108, 150, 243, 393, 509, 735, 903, 917
TspRI	CASTG	3 cut(s)	76, 853, 1476
Tth111I	GACNNNGTC	1 cut(s)	1171
Van91I	CCANNNNNTGG	1 cut(s)	1061
VpaK11BI	GGWCC	1 cut(s)	697
XagI	CCTNNNNNAGG	2 cut(s)	1019, 1345
XapI	RAATTY	1 cut(s)	881
XbaI	TCTAGA	1 cut(s)	814
XceI	RCATGY	4 cut(s)	537, 994, 1202, 1429
XhoI	CTCGAG	1 cut(s)	31
XspI	CTAG	5 cut(s)	815, 1002, 1181, 1283, 1499
Zsp2I	ATGCAT	2 cut(s)	1200, 1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.