Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0006851

Physical Location & Seq

Genomic Coordinates Reverse (-)

2734837 .. 2739943

Gene Structure 5107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1037200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGTGCTTTTGATCGCTTTGGGATCTTATCTGATCTGTGGGATTGCTCTGTTAGCATTCAGAATTCTGCCTTCTGTTGATTCTTTTGGAGTAAAAAACTTGATTGACTATGAGCAGATAACCTTACACGTTATGGGTTGGCTTAGCAAGATTTTTAAAGGCTCGAGCCACAAGATATCGGAGGAGCATTGTCATGAGTCTCATGACAATAATGACGAGGATCCAAATAGCTATGGACCTTCTTGTTCAGGGGAGGTCTGGTCAGAAAACGAGAATGAAGAAATAGATCGTGCTATTGCACTATCTCTTTTAGAAGAAAATCAAAAAGGAAAAAATGTGATTGGCTCTGATTCTCAGTTGCTAGAAGATGAACAACTTGCCAGAGCTCTACAAGAAAGTCTGAATGTGGAATCTCCTCCCCGACATGGTAATGGAAATGGAAATGGAACTACGTATCAACCTTTCCTTCCTCCCCGGCATGGAAATGGAAATGGAAATGGAACTACGTATCAACCTTTCCCTCCTCCCCGGCATGGAAATGGAAATGGCAATACATATCAACCTATCCTTCCTCCCCGATATGGAAATGGAAATGGAAATGGAAATGGAAATACATATCAACCTATCCCTCCTCCCCGATATGGAAATGGAAGTTCATACCCTATCCCCATGGACTACCCAATGGGCTCCAGGGTTTGTGCTGGTTGCAATGCTGAGATTGGTTTTGGACGGTATTTAAATTGCATGAATGCAGTTTGGCATCCAGAATGTTTCCGCTGTCGTGCATGCAACCAACCAATTTCTGATTATGAGTTTTCTACATCTGGGCATTATCCTTACCATAAAGCTTGCTACAAGGATAGCTACCATCCGAAATGTGATGTTTGCAAGCACTTTATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACATCCATTTTGGGTCCAAAAATACTGCCCTGTTCATGAAATTGATAATACTCCTCGGTGTGGCAGTTGTGAGCGAATGGAGGCCCGAGACACAAGATATGTACCCCTTGATGATGGTCGGAAGCTCTGTCTAGAGTGTTTGGACTCTGCAGTCATGGATACCAGTGAATGCCAACCCCTATATCTCGATATTCAGGAATTTTATGAAGGTTTAAATATGAAGTTGGAGCAGCAAGTTCCACTGCTCTTGGTTGAAAGACAAGCGCTAAATGAAGCAAGAGATGGAGAAAGAAATGGCCATTATCACATGCCTGAGACTAGAGGGCTTTGCCTTTCTGAGGAACAAACTATTAGCACGATTTCAAAGCGGCCACGTTTTGGGGCAGGACACCAAGCCACGGGATTGATAACAGAGCCCTACAAGCTAACTCGTCGCTGTGAGGTGACCGCAATTCTAATCTTGTATGGTCTTCCAAGGTTGCTGACTGGGTCTATTCTAGCTCATGAGATGATGCATGCATGGCTGCGGCTTAAAGGTTACCGACCTCTTAGTCAAGATGTCGAAGAAGGTATCTGTCAAGTTTTAGCTCACATGTGGCTAGAGGCCGAGCTTATGTCTGGCTCAGGTAGCAATGCTGCATCAACCTCGTCTTCCTCCTCTTCGAGGACATCAAAGAAGGGTACAAGATCGCCGTTTGAGAGTAAGCTCGGGGGGTTCTTTTTACACCAGCTCGAAACTGACATGTCCCCGGTGTATGGAGATGGATTCAGGGCCGGTCAACAGGCAGTGCAGAAATACGGGCTTCGAAGTACCCTAGAACATATTAGAATGACAGGGGTGTTTCCTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008285 GO:0009653 GO:0009791 GO:0009908 GO:0010154 GO:0016787 GO:0019538 GO:0022414 GO:0032182 GO:0032501 GO:0032502 GO:0035670 GO:0040008 GO:0042127 GO:0043130 GO:0043170 GO:0044238 GO:0045926 GO:0046620 GO:0046621 GO:0048316 GO:0048317 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048467 GO:0048481 GO:0048482 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0061458 GO:0065007 GO:0071704 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1905392 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DA1-like LIM UIM

Protein Analysis

596

Amino Acids

66.44

Weight (kDa)

5.98

Isoelectric Point (pI)

45.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM	PF00412	233 - 287	3.1e-10	LIM domain
DA1-like	PF12315	382 - 590	1.4e-99	Protein DA1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19270 AT1G19270
fragaria_vesca	FvH4_2g40390 FvH4_2g40390 FvH4_2g40390 FvH4_2g40390
malus_domestica	MD00G1039600.v1.1 MD08G1037200.v1.1
prunus_persica	Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1
pyrus_communis	pycom08g02960 pycom15g02890
rosa_chinensis	RchiOBHm_Chr6g0300341
rosa_laevigata	RLG00000011346
rosa_multiflora	Rmu_sc0001670.1_g000021
rosa_roxburghii	Rroxscaffold_7G00167880
rosa_rugosa	Rorug06G0295000 Rorug06G0295100 Rorug06G0295200 Rorug06G0295200
rosa_samantha	Rh6AG407900 Rh6BG415200 Rh6CG422600 Rh6DG408200
rosa_wichuraiana	Rw6G035670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1085, 1485
AccB7I	CCANNNNNTGG	1 cut(s)	1313
AciI	CCGC	4 cut(s)	775, 1303, 1383, 1462
AclWI	GGATC	3 cut(s)	31, 215, 228
AcoI	YGGCCR	2 cut(s)	1231, 1304
AcsI	RAATTY	2 cut(s)	63, 1133
AfaI	GTAC	3 cut(s)	1038, 1618, 1747
AfeI	AGCGCT	1 cut(s)	1200
AflIII	ACRYGT	3 cut(s)	127, 1527, 1677
AgsI	TTSAA	3 cut(s)	926, 1190, 1299
AjnI	CCWGG	1 cut(s)	689
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	3 cut(s)	204, 1017, 1244
AlwI	GGATC	3 cut(s)	31, 215, 228
Ama87I	CYCGRG	3 cut(s)	163, 1020, 1643
Aor51HI	AGCGCT	1 cut(s)	1200
AoxI	GGCC	5 cut(s)	1017, 1231, 1304, 1539, 1707
ApeKI	GCWGC	3 cut(s)	1165, 1459, 1571
ApoI	RAATTY	2 cut(s)	63, 1133
AspLEI	GCGC	1 cut(s)	1201
AspS9I	GGNCC	4 cut(s)	236, 949, 1018, 1707
AsuC2I	CCSGG	3 cut(s)	475, 529, 1685
AsuHPI	GGTGA	1 cut(s)	1390
AsuII	TTCGAA	1 cut(s)	1741
AvaI	CYCGRG	3 cut(s)	163, 1020, 1643
AvaII	GGWCC	2 cut(s)	236, 949
BaeGI	GKGCMC	1 cut(s)	937
BalI	TGGCCA	1 cut(s)	1233
BamHI	GGATCC	1 cut(s)	220
BanII	GRGCYC	3 cut(s)	388, 689, 1353
BbsI	GAAGAC	2 cut(s)	1397, 1578
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	3 cut(s)	1177, 1446, 1558
BccI	CCATC	4 cut(s)	876, 1043, 1211, 1691
BceAI	ACGGC	1 cut(s)	1612
BcgI	CGANNNNNNTGC	2 cut(s)	1563, 1597
BciT130I	CCWGG	1 cut(s)	691
BciVI	GTATCC	1 cut(s)	1087
BcnI	CCSGG	3 cut(s)	475, 529, 1685
BcoDI	GTCTC	3 cut(s)	204, 1017, 1244
BfaI	CTAG	6 cut(s)	362, 1067, 1254, 1433, 1535, 1751
BfmI	CTRYAG	1 cut(s)	1083
BfoI	RGCGCY	1 cut(s)	1202
BfuI	GTATCC	1 cut(s)	1087
BisI	GCNGC	5 cut(s)	1166, 1304, 1460, 1463, 1572
BlpI	GCTNAGC	1 cut(s)	143
BlsI	GCNGC	5 cut(s)	1167, 1305, 1461, 1464, 1573
Bme1390I	CCNGG	4 cut(s)	475, 529, 691, 1685
Bme18I	GGWCC	2 cut(s)	236, 949
BmeT110I	CYCGRG	3 cut(s)	163, 1020, 1643
BmgT120I	GGNCC	4 cut(s)	236, 949, 1018, 1707
BmiI	GGNNCC	3 cut(s)	222, 688, 950
BmrFI	CCNGG	4 cut(s)	475, 529, 691, 1685
BmrI	ACTGGG	1 cut(s)	1431
BmsI	GCATC	3 cut(s)	769, 1437, 1583
BmuI	ACTGGG	1 cut(s)	1431
BpiI	GAAGAC	2 cut(s)	1397, 1578
BpmI	CTGGAG	1 cut(s)	673
Bpu10I	CCTNAGC	1 cut(s)	1558
Bpu1102I	GCTNAGC	1 cut(s)	143
Bpu14I	TTCGAA	1 cut(s)	1741
BpuMI	CCSGG	3 cut(s)	475, 529, 1685
BsaAI	YACGTR	2 cut(s)	453, 507
BsaJI	CCNNGG	8 cut(s)	473, 527, 669, 690, 989, 1332, 1409, 1683
BsaXI	ACNNNNNCTCC	2 cut(s)	245, 275
Bse118I	RCCGGY	1 cut(s)	1709
Bse1I	ACTGG	2 cut(s)	1098, 1426
Bse3DI	GCAATG	2 cut(s)	715, 1573
BseBI	CCWGG	1 cut(s)	691
BseDI	CCNNGG	8 cut(s)	473, 527, 669, 690, 989, 1332, 1409, 1683
BseGI	GGATG	3 cut(s)	760, 868, 937
BseMI	GCAATG	2 cut(s)	715, 1573
BseMII	CTCAG	5 cut(s)	368, 705, 1239, 1263, 1572
BseNI	ACTGG	2 cut(s)	1098, 1426
BseRI	GAGGAG	6 cut(s)	197, 405, 513, 621, 978, 1582
BseSI	GKGCMC	1 cut(s)	937
BseXI	GCAGC	3 cut(s)	1177, 1446, 1558
BsgI	GTGCAG	1 cut(s)	1745
BshFI	GGCC	5 cut(s)	1019, 1233, 1306, 1541, 1709
BsiHKAI	GWGCWC	1 cut(s)	388
BsiHKCI	CYCGRG	3 cut(s)	163, 1020, 1643
BsiSI	CCGG	4 cut(s)	475, 529, 1685, 1710
BslFI	GGGAC	1 cut(s)	1666
BsmAI	GTCTC	3 cut(s)	204, 1017, 1244
BsmFI	GGGAC	1 cut(s)	1666
BsmI	GAATGC	3 cut(s)	56, 754, 1109
BsnI	GGCC	5 cut(s)	1019, 1233, 1306, 1541, 1709
BsoBI	CYCGRG	3 cut(s)	163, 1020, 1643
Bsp119I	TTCGAA	1 cut(s)	1741
Bsp1286I	GDGCHC	4 cut(s)	388, 689, 937, 1353
Bsp143I	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
Bsp1720I	GCTNAGC	1 cut(s)	143
Bsp19I	CCATGG	1 cut(s)	669
BspACI	CCGC	4 cut(s)	775, 1303, 1383, 1462
BspANI	GGCC	5 cut(s)	1019, 1233, 1306, 1541, 1709
BspCNI	CTCAG	5 cut(s)	367, 706, 1240, 1264, 1571
BspHI	TCATGA	4 cut(s)	193, 202, 970, 1438
BspLI	GGNNCC	3 cut(s)	222, 688, 950
BspMAI	CTGCAG	1 cut(s)	1087
BspPI	GGATC	3 cut(s)	31, 215, 228
BspT104I	TTCGAA	1 cut(s)	1741
BsrDI	GCAATG	2 cut(s)	715, 1573
BsrFI	RCCGGY	1 cut(s)	1709
BsrI	ACTGG	2 cut(s)	1098, 1426
BssAI	RCCGGY	1 cut(s)	1709
BssECI	CCNNGG	8 cut(s)	473, 527, 669, 690, 989, 1332, 1409, 1683
BssMI	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
BssT1I	CCWWGG	2 cut(s)	669, 1409
Bst2UI	CCWGG	1 cut(s)	691
Bst4CI	ACNGT	1 cut(s)	732
Bst6I	CTCTTC	1 cut(s)	1600
BstBAI	YACGTR	2 cut(s)	453, 507
BstBI	TTCGAA	1 cut(s)	1741
BstC8I	GCNNGC	4 cut(s)	787, 850, 890, 1452
BstDEI	CTNAG	7 cut(s)	143, 354, 714, 1248, 1272, 1484, 1558
BstDSI	CCRYGG	2 cut(s)	669, 1332
BstEII	GGTNACC	2 cut(s)	1378, 1472
BstENI	CCTNNNNNAGG	2 cut(s)	1271, 1597
BstF5I	GGATG	3 cut(s)	760, 868, 937
BstH2I	RGCGCY	1 cut(s)	1202
BstHHI	GCGC	1 cut(s)	1201
BstKTI	GATC	6 cut(s)	15, 26, 36, 223, 289, 1625
BstMAI	GTCTC	3 cut(s)	204, 1017, 1244
BstMBI	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
BstMWI	GCNNNNNNNGC	4 cut(s)	53, 1357, 1456, 1563
BstNI	CCWGG	1 cut(s)	691
BstNSI	RCATGY	5 cut(s)	789, 1246, 1454, 1531, 1681
BstPI	GGTNACC	2 cut(s)	1378, 1472
BstSCI	CCNGG	4 cut(s)	473, 527, 689, 1683
BstSFI	CTRYAG	1 cut(s)	1083
BstSLI	GKGCMC	1 cut(s)	937
BstSNI	TACGTA	2 cut(s)	453, 507
BstV1I	GCAGC	3 cut(s)	1177, 1446, 1558
BstV2I	GAAGAC	2 cut(s)	1397, 1578
BstX2I	RGATCY	2 cut(s)	23, 220
BstYI	RGATCY	2 cut(s)	23, 220
BsuI	GTATCC	1 cut(s)	1087
BsuRI	GGCC	5 cut(s)	1019, 1233, 1306, 1541, 1709
BtgI	CCRYGG	2 cut(s)	669, 1332
BtsCI	GGATG	3 cut(s)	760, 868, 937
BtsI	GCAGTG	2 cut(s)	1175, 1728
BtsIMutI	CAGTG	3 cut(s)	1105, 1175, 1728
Cac8I	GCNNGC	4 cut(s)	787, 850, 890, 1452
CciI	TCATGA	4 cut(s)	193, 202, 970, 1438
CfoI	GCGC	1 cut(s)	1201
Cfr10I	RCCGGY	1 cut(s)	1709
Cfr13I	GGNCC	4 cut(s)	236, 949, 1018, 1707
Csp6I	GTAC	3 cut(s)	1037, 1617, 1746
CspCI	CAANNNNNGTGG	2 cut(s)	1164, 1199
CviQI	GTAC	3 cut(s)	1037, 1617, 1746
DdeI	CTNAG	7 cut(s)	143, 354, 714, 1248, 1272, 1484, 1558
DpnI	GATC	6 cut(s)	14, 25, 35, 222, 288, 1624
DpnII	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
DraI	TTTAAA	3 cut(s)	157, 738, 1149
DrdI	GACNNNNNNGTC	2 cut(s)	1085, 1485
DseDI	GACNNNNNNGTC	2 cut(s)	1085, 1485
EaeI	YGGCCR	2 cut(s)	1231, 1304
Eam1104I	CTCTTC	1 cut(s)	1600
EarI	CTCTTC	1 cut(s)	1600
Ecl136II	GAGCTC	1 cut(s)	386
Eco105I	TACGTA	2 cut(s)	453, 507
Eco130I	CCWWGG	2 cut(s)	669, 1409
Eco24I	GRGCYC	3 cut(s)	388, 689, 1353
Eco32I	GATATC	1 cut(s)	177
Eco47I	GGWCC	2 cut(s)	236, 949
Eco47III	AGCGCT	1 cut(s)	1200
Eco53kI	GAGCTC	1 cut(s)	386
Eco88I	CYCGRG	3 cut(s)	163, 1020, 1643
Eco91I	GGTNACC	2 cut(s)	1378, 1472
EcoICRI	GAGCTC	1 cut(s)	386
EcoNI	CCTNNNNNAGG	2 cut(s)	1271, 1597
EcoO65I	GGTNACC	2 cut(s)	1378, 1472
EcoRI	GAATTC	1 cut(s)	63
EcoRII	CCWGG	1 cut(s)	689
EcoRV	GATATC	1 cut(s)	177
EcoT14I	CCWWGG	2 cut(s)	669, 1409
EcoT22I	ATGCAT	2 cut(s)	1452, 1456
EcoT38I	GRGCYC	3 cut(s)	388, 689, 1353
ErhI	CCWWGG	2 cut(s)	669, 1409
FaqI	GGGAC	1 cut(s)	1666
Fnu4HI	GCNGC	5 cut(s)	1166, 1304, 1460, 1463, 1572
FokI	GGATG	3 cut(s)	747, 855, 924
FriOI	GRGCYC	3 cut(s)	388, 689, 1353
Fsp4HI	GCNGC	5 cut(s)	1166, 1304, 1460, 1463, 1572
FspBI	CTAG	6 cut(s)	362, 1067, 1254, 1433, 1535, 1751
GlaI	GCGC	1 cut(s)	1200
GluI	GCNGC	5 cut(s)	1166, 1304, 1460, 1463, 1572
GsuI	CTGGAG	1 cut(s)	673
HaeII	RGCGCY	1 cut(s)	1202
HaeIII	GGCC	5 cut(s)	1019, 1233, 1306, 1541, 1709
HapII	CCGG	4 cut(s)	475, 529, 1685, 1710
HhaI	GCGC	1 cut(s)	1201
Hin6I	GCGC	1 cut(s)	1199
HinP1I	GCGC	1 cut(s)	1199
HincII	GTYRAC	1 cut(s)	1715
HindII	GTYRAC	1 cut(s)	1715
HindIII	AAGCTT	1 cut(s)	846
HinfI	GANTC	6 cut(s)	80, 197, 350, 410, 1079, 1701
HpaII	CCGG	4 cut(s)	475, 529, 1685, 1710
HphI	GGTGA	1 cut(s)	1390
Hpy166II	GTNNAC	1 cut(s)	1715
Hpy188III	TCNNGA	9 cut(s)	194, 203, 764, 971, 1067, 1121, 1130, 1439, 1490
Hpy8I	GTNNAC	1 cut(s)	1715
Hpy99I	CGWCG	1 cut(s)	1371
HpyAV	CCTTC	7 cut(s)	81, 249, 476, 578, 1136, 1496, 1606
HpyCH4III	ACNGT	1 cut(s)	732
HpyCH4IV	ACGT	4 cut(s)	129, 452, 506, 1309
HpyF10VI	GCNNNNNNNGC	4 cut(s)	53, 1357, 1456, 1563
HpyF3I	CTNAG	7 cut(s)	143, 354, 714, 1248, 1272, 1484, 1558
HpySE526I	ACGT	4 cut(s)	129, 452, 506, 1309
HspAI	GCGC	1 cut(s)	1199
Kzo9I	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
LmnI	GCTCC	3 cut(s)	184, 692, 1162
Lsp1109I	GCAGC	3 cut(s)	1177, 1446, 1558
LweI	GCATC	3 cut(s)	769, 1437, 1583
MaeI	CTAG	6 cut(s)	362, 1067, 1254, 1433, 1535, 1751
MaeII	ACGT	4 cut(s)	129, 452, 506, 1309
MaeIII	GTNAC	2 cut(s)	1378, 1472
MalI	GATC	6 cut(s)	14, 25, 35, 222, 288, 1624
MboI	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
MboII	GAAGA	7 cut(s)	290, 326, 377, 1397, 1511, 1578, 1587
MflI	RGATCY	2 cut(s)	23, 220
MhlI	GDGCHC	4 cut(s)	388, 689, 937, 1353
MlsI	TGGCCA	1 cut(s)	1233
MluCI	AATT	6 cut(s)	63, 739, 798, 975, 1133, 1386
MluNI	TGGCCA	1 cut(s)	1233
MlyI	GAGTC	2 cut(s)	206, 1073
MmeI	TCCRAC	3 cut(s)	926, 1034, 1140
Mox20I	TGGCCA	1 cut(s)	1233
Mph1103I	ATGCAT	2 cut(s)	1452, 1456
MscI	TGGCCA	1 cut(s)	1233
MseI	TTAA	4 cut(s)	156, 737, 1148, 1467
MslI	CAYNNNNRTG	4 cut(s)	192, 429, 483, 537
Msp20I	TGGCCA	1 cut(s)	1233
MspA1I	CMGCKG	1 cut(s)	777
MspI	CCGG	4 cut(s)	475, 529, 1685, 1710
MspR9I	CCNGG	4 cut(s)	475, 529, 691, 1685
Mva1269I	GAATGC	3 cut(s)	56, 754, 1109
MvaI	CCWGG	1 cut(s)	691
MwoI	GCNNNNNNNGC	4 cut(s)	53, 1357, 1456, 1563
NciI	CCSGG	3 cut(s)	475, 529, 1685
NcoI	CCATGG	1 cut(s)	669
NdeII	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
NlaIV	GGNNCC	3 cut(s)	222, 688, 950
NmeAIII	GCCGAG	1 cut(s)	1567
NmuCI	GTSAC	1 cut(s)	1378
NsiI	ATGCAT	2 cut(s)	1452, 1456
NspI	RCATGY	5 cut(s)	789, 1246, 1454, 1531, 1681
NspV	TTCGAA	1 cut(s)	1741
PaeI	GCATGC	2 cut(s)	789, 1454
PaeR7I	CTCGAG	1 cut(s)	163
PagI	TCATGA	4 cut(s)	193, 202, 970, 1438
PciI	ACATGT	2 cut(s)	1527, 1677
PctI	GAATGC	3 cut(s)	56, 754, 1109
PfeI	GAWTC	4 cut(s)	80, 350, 410, 1701
PflFI	GACNNNGTC	1 cut(s)	1423
PflMI	CCANNNNNTGG	1 cut(s)	1313
PkrI	GCNGC	5 cut(s)	1167, 1305, 1461, 1464, 1573
PleI	GAGTC	2 cut(s)	205, 1073
PpsI	GAGTC	2 cut(s)	205, 1073
Ppu21I	YACGTR	2 cut(s)	453, 507
PscI	ACATGT	2 cut(s)	1527, 1677
Psp124BI	GAGCTC	1 cut(s)	388
Psp6I	CCWGG	1 cut(s)	689
PspEI	GGTNACC	2 cut(s)	1378, 1472
PspGI	CCWGG	1 cut(s)	689
PspN4I	GGNNCC	3 cut(s)	222, 688, 950
PspPI	GGNCC	4 cut(s)	236, 949, 1018, 1707
PspXI	VCTCGAGB	1 cut(s)	163
PstI	CTGCAG	1 cut(s)	1087
PsuI	RGATCY	2 cut(s)	23, 220
PsyI	GACNNNGTC	1 cut(s)	1423
RsaI	GTAC	3 cut(s)	1038, 1618, 1747
RsaNI	GTAC	3 cut(s)	1037, 1617, 1746
RseI	CAYNNNNRTG	4 cut(s)	192, 429, 483, 537
SacI	GAGCTC	1 cut(s)	388
SaqAI	TTAA	4 cut(s)	156, 737, 1148, 1467
SatI	GCNGC	5 cut(s)	1166, 1304, 1460, 1463, 1572
Sau3AI	GATC	6 cut(s)	12, 23, 33, 220, 286, 1622
Sau96I	GGNCC	4 cut(s)	236, 949, 1018, 1707
SchI	GAGTC	2 cut(s)	206, 1073
ScrFI	CCNGG	4 cut(s)	475, 529, 691, 1685
SduI	GDGCHC	4 cut(s)	388, 689, 937, 1353
SfaNI	GCATC	3 cut(s)	769, 1437, 1583
SfcI	CTRYAG	1 cut(s)	1083
Sfr274I	CTCGAG	1 cut(s)	163
SfuI	TTCGAA	1 cut(s)	1741
SinI	GGWCC	2 cut(s)	236, 949
SlaI	CTCGAG	1 cut(s)	163
SmiI	ATTTAAAT	1 cut(s)	738
SmiMI	CAYNNNNRTG	4 cut(s)	192, 429, 483, 537
SmlI	CTYRAG	1 cut(s)	163
SmoI	CTYRAG	1 cut(s)	163
SnaBI	TACGTA	2 cut(s)	453, 507
SphI	GCATGC	2 cut(s)	789, 1454
Sse9I	AATT	6 cut(s)	63, 739, 798, 975, 1133, 1386
SsiI	CCGC	4 cut(s)	775, 1303, 1383, 1462
SspMI	CTAG	6 cut(s)	362, 1067, 1254, 1433, 1535, 1751
SstI	GAGCTC	1 cut(s)	388
StyD4I	CCNGG	4 cut(s)	473, 527, 689, 1683
StyI	CCWWGG	2 cut(s)	669, 1409
SwaI	ATTTAAAT	1 cut(s)	738
TaaI	ACNGT	1 cut(s)	732
TaiI	ACGT	4 cut(s)	132, 455, 509, 1312
TaqI	TCGA	6 cut(s)	164, 1122, 1497, 1598, 1668, 1741
TasI	AATT	6 cut(s)	63, 739, 798, 975, 1133, 1386
TauI	GCSGC	2 cut(s)	1306, 1465
TfiI	GAWTC	4 cut(s)	80, 350, 410, 1701
Tru1I	TTAA	4 cut(s)	156, 737, 1148, 1467
Tru9I	TTAA	4 cut(s)	156, 737, 1148, 1467
TscAI	CASTG	3 cut(s)	1105, 1182, 1728
TseFI	GTSAC	1 cut(s)	1378
TseI	GCWGC	3 cut(s)	1165, 1459, 1571
Tsp45I	GTSAC	1 cut(s)	1378
TspDTI	ATGAA	9 cut(s)	291, 384, 645, 761, 959, 987, 1155, 1169, 1221
TspRI	CASTG	3 cut(s)	1105, 1182, 1728
Tth111I	GACNNNGTC	1 cut(s)	1423
Van91I	CCANNNNNTGG	1 cut(s)	1313
VpaK11BI	GGWCC	2 cut(s)	236, 949
XagI	CCTNNNNNAGG	2 cut(s)	1271, 1597
XapI	RAATTY	2 cut(s)	63, 1133
XbaI	TCTAGA	1 cut(s)	1066
XceI	RCATGY	5 cut(s)	789, 1246, 1454, 1531, 1681
XhoI	CTCGAG	1 cut(s)	163
XspI	CTAG	6 cut(s)	362, 1067, 1254, 1433, 1535, 1751
Zsp2I	ATGCAT	2 cut(s)	1452, 1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.