Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001670.1

Orthogroup ID

OG0006851

Physical Location & Seq

Genomic Coordinates Reverse (-)

80517 .. 87358

Gene Structure 6842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001670.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

atgattgatgcacatatcgatgacgatgatgatggcgtacacacagaaatgaagatcgataaggtttcagtagggggatgtggagggctaattgggagaaagaaaggagctgtgggaatccgcatcaactataaaggcattccgatggtcttcatctcttgccatctctctggtatcgacggctttctgatctgtttcactgtttttccttcgatccatctccgactaaaagcttttactcatgctcacaatgtggggaagaggaattcagaatacaagagcgtatcagaatctcttttttccaagaacttgaacccttatgcttcacctcccaaaatcattgtttggttgggagatctcaactatagaatacaagggattgaaactcattccgtacgaaaactgataaacaaagatcttcacggacaactaaccagcaatgaccaactattacaagaggccgaaagaggagagatcttcgaaggataccacgaggggacgataacgttcaaacccacttacaaatacgacgttggaagtagcaactacgacacaagttataaggtgagagtgccatcgtggaccgatcggattctgttcaagacggaggaaggcatagacgagttccatgcgacactacactcttacgaatcaatggacgaaattcacagttcagatcataagccagtcaaagctcacatctttaaaaagttaatatactatgagcacataacattacacataatgggttggcttagcaagattttcaaaggctccagccacaaaatatcagaagagcattgtcatgagaacgatggaggggatccaaatactgatggtccttcttgttcaggggacatctggccagaaaatgagaatgaagatatagaccgtgctattgcattatctcttttagaagaaaatcagaaaggaaaaaatgtgattgattttgattctcagttggaagaagatgaacaacttgccagagccttacaagaaagtttgaatgtggactctcctccccgaaatggaaatggaaatacacatcctcctcaatatggaggaaatccacatcctcctcaatatggaaatggaaatacatatcctcctcaatatgggaatggaaatacacatcctccccgatatggaagtggaaatggaaatggaaatacacttcctcctcgatatgaaaacggaaatgcatatcctcctcgatatggaaatggacatacatatccacctatccccatgtactatccaatggggtccaggatttgtgccggttgcagtgctgagattggttttggacgatatttgaattgcctgaatgcattttggcatccagaatgcttccggtgccgtgcatgcaatgtaccgatttccgattacgagttttctacatctgggaattacccttaccacaaatcttgctataaggagagctaccatccaaaatgtgatgtttgcaagcactttattccaacaaaccctgctggtcttattgaatatagggcacatccattttgggttcaaaaatattgcccgtctcatgaacatgataatactcctcggtgttgcagctgtgagcgaatggaggcacgggacacagcatatataaatctaaatgatggtcggaagctctgtctagagtgtttggactctgcaatcatggataccagtgaatgccaacccctatatcttgatatacaggaattttatgaaggtttgaatatgaaagtggagcagcaagttccattactcttggttgaaagggaagcactaaatgaagcgagagaaggagaaagaaatggccattatcacatgcctgagaccagagggctctgcctttctgaggaacagactattagcacaatttcaaggcggccaaagtttggggcaggaaaccgagccacggacatgataacagagccctacaaactaactcgcctctgtgaggtgacagcaattctaatattgtatggtcttccaaggttgctgactgggtctatcctagcacatgaaatgatgcatgcatggctgcggcttaaaggttatcgactcagtcaagatgttgaagaaggtatctgtcaggttatagctcacatgtggctagatgctgagcttatgtctggctcagaagggaattctgcatctacatcatcatcgtccttcagttccaattcatcaaagaagggtacacgatctcagtttgagaagaagattggtgagttctttaagcaccagatcgaagtagatatttccccagtatatggagacggatatagggctggtcagcaggcagtgaataaatacgggcttagaaggaccctagaccatattcaaatgacagggacctttccttattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008285 GO:0009653 GO:0009791 GO:0009908 GO:0010154 GO:0016787 GO:0019538 GO:0022414 GO:0032182 GO:0032501 GO:0032502 GO:0035670 GO:0040008 GO:0042127 GO:0043130 GO:0043170 GO:0044238 GO:0045926 GO:0046620 GO:0046621 GO:0048316 GO:0048317 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048467 GO:0048481 GO:0048482 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0061458 GO:0065007 GO:0071704 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1905392 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DA1-like LIM UIM

Protein Analysis

788

Amino Acids

89.0

Weight (kDa)

6.0

Isoelectric Point (pI)

40.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19270 AT1G19270
fragaria_vesca	FvH4_2g40390 FvH4_2g40390 FvH4_2g40390 FvH4_2g40390
malus_domestica	MD00G1039600.v1.1 MD08G1037200.v1.1
prunus_persica	Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1
pyrus_communis	pycom08g02960 pycom15g02890
rosa_chinensis	RchiOBHm_Chr6g0300341
rosa_laevigata	RLG00000011346
rosa_multiflora	Rmu_sc0001670.1_g000021
rosa_roxburghii	Rroxscaffold_7G00167880
rosa_rugosa	Rorug06G0295000 Rorug06G0295100 Rorug06G0295200 Rorug06G0295200
rosa_samantha	Rh6AG407900 Rh6BG415200 Rh6CG422600 Rh6DG408200
rosa_wichuraiana	Rw6G035670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	561
AccB1I	GGYRCC	1 cut(s)	1356
AccB7I	CCANNNNNTGG	2 cut(s)	1892, 2270
AciI	CCGC	3 cut(s)	121, 1882, 2041
AclI	AACGTT	1 cut(s)	506
AclWI	GGATC	3 cut(s)	208, 818, 831
AcoI	YGGCCR	3 cut(s)	863, 1810, 1883
AcsI	RAATTY	4 cut(s)	265, 663, 1712, 2143
AcuI	CTGAAG	1 cut(s)	2155
AdeI	CACNNNGTG	1 cut(s)	253
AfaI	GTAC	5 cut(s)	39, 396, 1253, 1374, 2197
AflIII	ACRYGT	1 cut(s)	2103
AjnI	CCWGG	1 cut(s)	1268
AluBI	AGCT	8 cut(s)	110, 233, 695, 1443, 1581, 1639, 2099, 2122
AluI	AGCT	8 cut(s)	110, 233, 695, 1443, 1581, 1639, 2099, 2122
Alw21I	GWGCWC	1 cut(s)	729
Alw26I	GTCTC	3 cut(s)	1551, 1823, 2268
AlwI	GGATC	3 cut(s)	208, 818, 831
AoxI	GGCC	4 cut(s)	459, 863, 1810, 1883
ApeKI	GCWGC	3 cut(s)	1578, 1744, 2038
ApoI	RAATTY	4 cut(s)	265, 663, 1712, 2143
AspS9I	GGNCC	5 cut(s)	582, 839, 1266, 2325, 2352
AsuHPI	GGTGA	4 cut(s)	318, 577, 1969, 2237
AsuII	TTCGAA	1 cut(s)	480
AvaII	GGWCC	5 cut(s)	582, 839, 1266, 2325, 2352
BaeGI	GKGCMC	1 cut(s)	1516
BalI	TGGCCA	2 cut(s)	865, 1812
BamHI	GGATCC	1 cut(s)	823
BanI	GGYRCC	1 cut(s)	1356
BanII	GRGCYC	2 cut(s)	1842, 1932
BauI	CACGAG	1 cut(s)	491
BbsI	GAAGAC	2 cut(s)	142, 1976
Bbv12I	GWGCWC	1 cut(s)	729
BbvI	GCAGC	3 cut(s)	1590, 1756, 2025
BccI	CCATC	9 cut(s)	26, 139, 171, 225, 583, 809, 830, 1455, 1622
BceAI	ACGGC	2 cut(s)	196, 1344
BcgI	CGANNNNNNTGC	2 cut(s)	611, 645
BciT130I	CCWGG	1 cut(s)	1270
BciVI	GTATCC	2 cut(s)	479, 1666
BcoDI	GTCTC	3 cut(s)	1551, 1823, 2268
BfaI	CTAG	4 cut(s)	1646, 2012, 2111, 2330
BfmI	CTRYAG	1 cut(s)	364
BfuI	GTATCC	2 cut(s)	479, 1666
BglII	AGATCT	3 cut(s)	355, 415, 474
BisI	GCNGC	5 cut(s)	1579, 1745, 1883, 2039, 2042
BlpI	GCTNAGC	2 cut(s)	755, 2118
BlsI	GCNGC	5 cut(s)	1580, 1746, 1884, 2040, 2043
Bme1390I	CCNGG	1 cut(s)	1270
Bme18I	GGWCC	5 cut(s)	582, 839, 1266, 2325, 2352
BmgT120I	GGNCC	5 cut(s)	582, 839, 1266, 2325, 2352
BmiI	GGNNCC	6 cut(s)	775, 825, 1267, 1358, 2327, 2353
BmrFI	CCNGG	1 cut(s)	1270
BmrI	ACTGGG	2 cut(s)	2010, 2258
BmsI	GCATC	5 cut(s)	132, 1348, 2016, 2104, 2159
BmuI	ACTGGG	2 cut(s)	2010, 2258
BpiI	GAAGAC	2 cut(s)	142, 1976
BpmI	CTGGAG	1 cut(s)	760
Bpu1102I	GCTNAGC	2 cut(s)	755, 2118
Bpu14I	TTCGAA	1 cut(s)	480
Bsa29I	ATCGAT	2 cut(s)	18, 57
BsaI	GGTCTC	1 cut(s)	1823
BsaJI	CCNNGG	3 cut(s)	1568, 1911, 1988
BsaWI	WCCGGW	1 cut(s)	1353
BsaXI	ACNNNNNCTCC	8 cut(s)	1033, 1063, 1090, 1120, 1120, 1150, 1162, 1192
Bse118I	RCCGGY	1 cut(s)	1280
Bse1I	ACTGG	4 cut(s)	686, 1677, 2005, 2264
Bse3DI	GCAATG	2 cut(s)	445, 1375
BseBI	CCWGG	1 cut(s)	1270
BseCI	ATCGAT	2 cut(s)	18, 57
BseDI	CCNNGG	3 cut(s)	1568, 1911, 1988
BseGI	GGATG	7 cut(s)	83, 1045, 1072, 1132, 1339, 1447, 1516
BseMI	GCAATG	2 cut(s)	445, 1375
BseMII	CTCAG	8 cut(s)	971, 1284, 1818, 1842, 2074, 2109, 2148, 2219
BseNI	ACTGG	4 cut(s)	686, 1677, 2005, 2264
BseRI	GAGGAG	8 cut(s)	483, 1008, 1041, 1068, 1098, 1170, 1200, 1557
BseSI	GKGCMC	1 cut(s)	1516
BseXI	GCAGC	3 cut(s)	1590, 1756, 2025
Bsh1285I	CGRYCG	1 cut(s)	589
BshFI	GGCC	4 cut(s)	461, 865, 1812, 1885
BshNI	GGYRCC	1 cut(s)	1356
BshVI	ATCGAT	2 cut(s)	18, 57
BsiEI	CGRYCG	1 cut(s)	589
BsiHKAI	GWGCWC	1 cut(s)	729
BsiSI	CCGG	2 cut(s)	1281, 1354
BsiWI	CGTACG	1 cut(s)	394
BslFI	GGGAC	3 cut(s)	511, 869, 1616
BsmAI	GTCTC	3 cut(s)	1551, 1823, 2268
BsmBI	CGTCTC	2 cut(s)	1551, 2268
BsmFI	GGGAC	3 cut(s)	511, 869, 1616
BsmI	GAATGC	4 cut(s)	138, 1333, 1352, 1688
BsnI	GGCC	4 cut(s)	461, 865, 1812, 1885
Bso31I	GGTCTC	1 cut(s)	1823
Bsp119I	TTCGAA	1 cut(s)	480
Bsp1286I	GDGCHC	4 cut(s)	729, 1516, 1842, 1932
Bsp1720I	GCTNAGC	2 cut(s)	755, 2118
BspACI	CCGC	3 cut(s)	121, 1882, 2041
BspANI	GGCC	4 cut(s)	461, 865, 1812, 1885
BspCNI	CTCAG	8 cut(s)	970, 1285, 1819, 1843, 2073, 2110, 2147, 2218
BspDI	ATCGAT	2 cut(s)	18, 57
BspHI	TCATGA	2 cut(s)	805, 1549
BspLI	GGNNCC	6 cut(s)	775, 825, 1267, 1358, 2327, 2353
BspPI	GGATC	3 cut(s)	208, 818, 831
BspQI	GCTCTTC	1 cut(s)	789
BspT104I	TTCGAA	1 cut(s)	480
BspT107I	GGYRCC	1 cut(s)	1356
BspTNI	GGTCTC	1 cut(s)	1823
BsrDI	GCAATG	2 cut(s)	445, 1375
BsrFI	RCCGGY	1 cut(s)	1280
BsrI	ACTGG	4 cut(s)	686, 1677, 2005, 2264
BssAI	RCCGGY	1 cut(s)	1280
BssECI	CCNNGG	3 cut(s)	1568, 1911, 1988
BssSI	CACGAG	1 cut(s)	491
BssT1I	CCWWGG	1 cut(s)	1988
Bst2BI	CACGAG	1 cut(s)	491
Bst2UI	CCWGG	1 cut(s)	1270
Bst4CI	ACNGT	3 cut(s)	202, 671, 893
Bst6I	CTCTTC	2 cut(s)	254, 789
BstBI	TTCGAA	1 cut(s)	480
BstC8I	GCNNGC	4 cut(s)	1366, 1469, 2031, 2298
BstDSI	CCRYGG	1 cut(s)	1911
BstENI	CCTNNNNNAGG	2 cut(s)	1850, 1952
BstF5I	GGATG	7 cut(s)	83, 1045, 1072, 1132, 1339, 1447, 1516
BstMAI	GTCTC	3 cut(s)	1551, 1823, 2268
BstMCI	CGRYCG	1 cut(s)	589
BstMWI	GCNNNNNNNGC	3 cut(s)	1356, 1365, 2035
BstNI	CCWGG	1 cut(s)	1270
BstNSI	RCATGY	4 cut(s)	1368, 1825, 2033, 2107
BstSCI	CCNGG	1 cut(s)	1268
BstSFI	CTRYAG	1 cut(s)	364
BstSLI	GKGCMC	1 cut(s)	1516
BstV1I	GCAGC	3 cut(s)	1590, 1756, 2025
BstV2I	GAAGAC	2 cut(s)	142, 1976
BstX2I	RGATCY	4 cut(s)	355, 415, 474, 823
BstXI	CCANNNNNNTGG	1 cut(s)	170
BstYI	RGATCY	4 cut(s)	355, 415, 474, 823
Bsu15I	ATCGAT	2 cut(s)	18, 57
BsuI	GTATCC	2 cut(s)	479, 1666
BsuRI	GGCC	4 cut(s)	461, 865, 1812, 1885
BsuTUI	ATCGAT	2 cut(s)	18, 57
BtgI	CCRYGG	1 cut(s)	1911
BtsCI	GGATG	7 cut(s)	83, 1045, 1072, 1132, 1339, 1447, 1516
BtsI	GCAGTG	2 cut(s)	1294, 2307
BtsIMutI	CAGTG	4 cut(s)	198, 1294, 1684, 2307
Cac8I	GCNNGC	4 cut(s)	1366, 1469, 2031, 2298
CciI	TCATGA	2 cut(s)	805, 1549
Cfr10I	RCCGGY	1 cut(s)	1280
Cfr13I	GGNCC	5 cut(s)	582, 839, 1266, 2325, 2352
ClaI	ATCGAT	2 cut(s)	18, 57
Csp6I	GTAC	5 cut(s)	38, 395, 1252, 1373, 2196
CspCI	CAANNNNNGTGG	2 cut(s)	1409, 1444
CviQI	GTAC	5 cut(s)	38, 395, 1252, 1373, 2196
DraI	TTTAAA	1 cut(s)	706
DraIII	CACNNNGTG	1 cut(s)	253
EaeI	YGGCCR	3 cut(s)	863, 1810, 1883
Eam1104I	CTCTTC	2 cut(s)	254, 789
EarI	CTCTTC	2 cut(s)	254, 789
Eco130I	CCWWGG	1 cut(s)	1988
Eco24I	GRGCYC	2 cut(s)	1842, 1932
Eco31I	GGTCTC	1 cut(s)	1823
Eco47I	GGWCC	5 cut(s)	582, 839, 1266, 2325, 2352
Eco57I	CTGAAG	1 cut(s)	2155
EcoNI	CCTNNNNNAGG	2 cut(s)	1850, 1952
EcoO109I	RGGNCCY	2 cut(s)	2325, 2352
EcoRI	GAATTC	2 cut(s)	265, 2143
EcoRII	CCWGG	1 cut(s)	1268
EcoT14I	CCWWGG	1 cut(s)	1988
EcoT22I	ATGCAT	4 cut(s)	1204, 1333, 2031, 2035
EcoT38I	GRGCYC	2 cut(s)	1842, 1932
ErhI	CCWWGG	1 cut(s)	1988
Esp3I	CGTCTC	2 cut(s)	1551, 2268
FaqI	GGGAC	3 cut(s)	511, 869, 1616
Fnu4HI	GCNGC	5 cut(s)	1579, 1745, 1883, 2039, 2042
FokI	GGATG	7 cut(s)	90, 1032, 1059, 1119, 1326, 1434, 1503
FriOI	GRGCYC	2 cut(s)	1842, 1932
Fsp4HI	GCNGC	5 cut(s)	1579, 1745, 1883, 2039, 2042
FspBI	CTAG	4 cut(s)	1646, 2012, 2111, 2330
GluI	GCNGC	5 cut(s)	1579, 1745, 1883, 2039, 2042
GsuI	CTGGAG	1 cut(s)	760
HaeIII	GGCC	4 cut(s)	461, 865, 1812, 1885
HapII	CCGG	2 cut(s)	1281, 1354
HindIII	AAGCTT	1 cut(s)	231
HinfI	GANTC	8 cut(s)	117, 290, 592, 650, 953, 1013, 1658, 2058
HpaII	CCGG	2 cut(s)	1281, 1354
HphI	GGTGA	4 cut(s)	318, 577, 1969, 2237
Hpy166II	GTNNAC	4 cut(s)	40, 582, 1012, 2198
Hpy188III	TCNNGA	7 cut(s)	601, 806, 1343, 1550, 1646, 1700, 2066
Hpy8I	GTNNAC	4 cut(s)	40, 582, 1012, 2198
Hpy99I	CGWCG	2 cut(s)	182, 533
HpyCH4III	ACNGT	3 cut(s)	202, 671, 893
HpyCH4IV	ACGT	2 cut(s)	506, 531
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1356, 1365, 2035
HpySE526I	ACGT	2 cut(s)	506, 531
LguI	GCTCTTC	1 cut(s)	789
LmnI	GCTCC	3 cut(s)	107, 779, 1741
Lsp1109I	GCAGC	3 cut(s)	1590, 1756, 2025
LweI	GCATC	5 cut(s)	132, 1348, 2016, 2104, 2159
MaeI	CTAG	4 cut(s)	1646, 2012, 2111, 2330
MaeII	ACGT	2 cut(s)	506, 531
MaeIII	GTNAC	1 cut(s)	1957
MflI	RGATCY	4 cut(s)	355, 415, 474, 823
MhlI	GDGCHC	4 cut(s)	729, 1516, 1842, 1932
MlsI	TGGCCA	2 cut(s)	865, 1812
MluNI	TGGCCA	2 cut(s)	865, 1812
MlyI	GAGTC	3 cut(s)	1007, 1652, 2052
MmeI	TCCRAC	5 cut(s)	247, 514, 942, 1505, 1613
Mox20I	TGGCCA	2 cut(s)	865, 1812
Mph1103I	ATGCAT	4 cut(s)	1204, 1333, 2031, 2035
MscI	TGGCCA	2 cut(s)	865, 1812
MseI	TTAA	4 cut(s)	705, 713, 2046, 2235
MslI	CAYNNNNRTG	6 cut(s)	18, 47, 143, 804, 1554, 1916
Msp20I	TGGCCA	2 cut(s)	865, 1812
MspA1I	CMGCKG	1 cut(s)	1581
MspI	CCGG	2 cut(s)	1281, 1354
MspR9I	CCNGG	1 cut(s)	1270
Mva1269I	GAATGC	4 cut(s)	138, 1333, 1352, 1688
MvaI	CCWGG	1 cut(s)	1270
MwoI	GCNNNNNNNGC	3 cut(s)	1356, 1365, 2035
NlaIV	GGNNCC	6 cut(s)	775, 825, 1267, 1358, 2327, 2353
NmuCI	GTSAC	1 cut(s)	1957
NsiI	ATGCAT	4 cut(s)	1204, 1333, 2031, 2035
NspI	RCATGY	4 cut(s)	1368, 1825, 2033, 2107
NspV	TTCGAA	1 cut(s)	480
PaeI	GCATGC	2 cut(s)	1368, 2033
PagI	TCATGA	2 cut(s)	805, 1549
PciI	ACATGT	1 cut(s)	2103
PciSI	GCTCTTC	1 cut(s)	789
PctI	GAATGC	4 cut(s)	138, 1333, 1352, 1688
PfeI	GAWTC	5 cut(s)	117, 290, 592, 650, 953
Pfl23II	CGTACG	1 cut(s)	394
PflFI	GACNNNGTC	2 cut(s)	2002, 2061
PflMI	CCANNNNNTGG	2 cut(s)	1892, 2270
PfoI	TCCNGGA	1 cut(s)	1268
PkrI	GCNGC	5 cut(s)	1580, 1746, 1884, 2040, 2043
Ple19I	CGATCG	1 cut(s)	589
PleI	GAGTC	3 cut(s)	1007, 1652, 2052
PpsI	GAGTC	3 cut(s)	1007, 1652, 2052
PpuMI	RGGWCCY	2 cut(s)	2325, 2352
PscI	ACATGT	1 cut(s)	2103
PsiI	TTATAA	1 cut(s)	561
Psp1406I	AACGTT	1 cut(s)	506
Psp5II	RGGWCCY	2 cut(s)	2325, 2352
Psp6I	CCWGG	1 cut(s)	1268
PspGI	CCWGG	1 cut(s)	1268
PspLI	CGTACG	1 cut(s)	394
PspN4I	GGNNCC	6 cut(s)	775, 825, 1267, 1358, 2327, 2353
PspPI	GGNCC	5 cut(s)	582, 839, 1266, 2325, 2352
PspPPI	RGGWCCY	2 cut(s)	2325, 2352
PsuI	RGATCY	4 cut(s)	355, 415, 474, 823
PsyI	GACNNNGTC	2 cut(s)	2002, 2061
PvuI	CGATCG	1 cut(s)	589
PvuII	CAGCTG	1 cut(s)	1581
RsaI	GTAC	5 cut(s)	39, 396, 1253, 1374, 2197
RsaNI	GTAC	5 cut(s)	38, 395, 1252, 1373, 2196
RseI	CAYNNNNRTG	6 cut(s)	18, 47, 143, 804, 1554, 1916
SapI	GCTCTTC	1 cut(s)	789
SaqAI	TTAA	4 cut(s)	705, 713, 2046, 2235
SatI	GCNGC	5 cut(s)	1579, 1745, 1883, 2039, 2042
Sau96I	GGNCC	5 cut(s)	582, 839, 1266, 2325, 2352
SchI	GAGTC	3 cut(s)	1007, 1652, 2052
ScrFI	CCNGG	1 cut(s)	1270
SduI	GDGCHC	4 cut(s)	729, 1516, 1842, 1932
SfaNI	GCATC	5 cut(s)	132, 1348, 2016, 2104, 2159
SfcI	CTRYAG	1 cut(s)	364
SfuI	TTCGAA	1 cut(s)	480
SinI	GGWCC	5 cut(s)	582, 839, 1266, 2325, 2352
SmiMI	CAYNNNNRTG	6 cut(s)	18, 47, 143, 804, 1554, 1916
SphI	GCATGC	2 cut(s)	1368, 2033
SsiI	CCGC	3 cut(s)	121, 1882, 2041
SspI	AATATT	2 cut(s)	1538, 1974
SspMI	CTAG	4 cut(s)	1646, 2012, 2111, 2330
StyD4I	CCNGG	1 cut(s)	1268
StyI	CCWWGG	1 cut(s)	1988
TaaI	ACNGT	3 cut(s)	202, 671, 893
TaiI	ACGT	2 cut(s)	509, 534
TaqI	TCGA	9 cut(s)	18, 57, 177, 212, 480, 1183, 1213, 2056, 2247
TaqII	GACCGA	1 cut(s)	599
TatI	WGTACW	1 cut(s)	1251
TauI	GCSGC	2 cut(s)	1885, 2044
TfiI	GAWTC	5 cut(s)	117, 290, 592, 650, 953
Tru1I	TTAA	4 cut(s)	705, 713, 2046, 2235
Tru9I	TTAA	4 cut(s)	705, 713, 2046, 2235
TscAI	CASTG	4 cut(s)	205, 1294, 1684, 2307
TseFI	GTSAC	1 cut(s)	1957
TseI	GCWGC	3 cut(s)	1578, 1744, 2038
Tsp45I	GTSAC	1 cut(s)	1957
TspGWI	ACGGA	6 cut(s)	382, 438, 620, 1209, 1928, 2292
TspRI	CASTG	4 cut(s)	205, 1294, 1684, 2307
Tth111I	GACNNNGTC	2 cut(s)	2002, 2061
Van91I	CCANNNNNTGG	2 cut(s)	1892, 2270
VpaK11BI	GGWCC	5 cut(s)	582, 839, 1266, 2325, 2352
XagI	CCTNNNNNAGG	2 cut(s)	1850, 1952
XapI	RAATTY	4 cut(s)	265, 663, 1712, 2143
XbaI	TCTAGA	1 cut(s)	1645
XceI	RCATGY	4 cut(s)	1368, 1825, 2033, 2107
XspI	CTAG	4 cut(s)	1646, 2012, 2111, 2330
Zsp2I	ATGCAT	4 cut(s)	1204, 1333, 2031, 2035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.