Prupe.1G384500_v2.0.a1

Protein DA1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
34484968 .. 34490426
5459 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G384500.2

Sequence Viewer

Length: 1644 bp
ATGGGTTGGCTTAGCAAGATTTTTAAAGGCTCCAGCCACAAGTTATCGGAAGAGCATTGTCGTGAGAATTATGGAGAGGATCCAAATAACTGTGGACCTTCTTGTTCCGGGGAGGTCTGGTCAGAAAACGAGAATGAAGATATAGACCGTGCTATTGCACTCTCTCTTTTAGAAGAAAATCAAAAAGGAAAAATTGTGGTTGGTTTTGATTCTCAGTTGGAAGAAGATGAACAACTCGCCAGAGCCCTACAAGAAAGTCTGAATGTGGAGTCTCCTCCCCAACATGGAAATGGAAATACATATCAACCTAGCACTCCTCCCCAATATGGAAATGGAAATACATATCAACCTATCACTCCTCCCCAACATGGAAATGAAAATACATATCAACCAAGCACTCCTCCCCAATATGGAAATGGAAATACATATCACCCTATCACTCCTCCCCATTATGGAAATGGAAATACATATCAACCTATCCCTCCTCCCAGATATGGAAATGGAAATGCATATCAACCTATCCCCATGTACTACCCAATGGGGTCCAGGATTTGTGCTGGTTGCAATGCTGAGATTGGTTTTGGACGATATTTGAATTGCCTGAATGCAGTTTGGCATCCAGAATGTTTCCGTTGTCGTGCATGCAACCTACCAATTTCTGATTATGAGTTTTCTACATCTGGGCATTACCCTTACCATAAATCTTGCTATAAGGAGAGCTACCATCCAAAATGTGATGTTTGCAAGCACTTTATTCCAACCAACACTGCTGGTCTTATTGAATATAGGGCACATCCATTTTGGGTCCAGAAATACTGCCCTTCTCATGAACACGATACTACTCCTCGGTGCTGCAGCTGTGAGCGAATGGAGCCACAGGACACAAAATATGTGCCCCTTAATGATGGTCGGAAGCTCTGTCTAGAGTGTCTGGACTCTGCAATCATGGATACCAGTGCATGCCAACCCCTATATCTTGATATACAGGAATTTTATGAAGGTTTAAATATGAAATTGGAGCAGCAAGTTCCGTTACTCTTGGTTGAAAGACAAGCGTTAAATGAAGCAAGAGAAGGAGAAAGAAATGGCCATTATCACATGCCTGAGACCAGAGGCCTTTGCCTTTCTGAAGAACAGACTATTAGCACGATTTCAAAGCGGCCACGGTTTGGGGGAGGAAACCACTCCATGGAAATGGTAACAGAGCCATACAAGCTAACTCGTCGCTGTGAGGTGACCGCAATTCTAATCTTGTATGGGCTTCCAAGGTTGCTGACTGGGTCTATTCTAGCACATGAGATGATGCATGCATGGCTGCGGCTTAAAGGTTACCGACCTCTTAGTCAAGATGTTGAAGAGGGTATCTGTCAGGTTCTAGCTTACATGTGGCTAGAGGCCGAGCTTATATCTGGCTCAGGCAGCGATGTGGCATCAACCTCGTCTTCCTCCACTTCCTCGGCAACGAAGAAGGGTACAAGATCTCAGTTTGAGAAGAAGCTCGGTGGGTTCTTTAAACACCAGGTGGAATCAGACATGTCCCCAGTATATGGAGATGGATTCCGGGCTGGTCAACAGGCAATACAGAAATATGGGCTTCGAAGTACCTTAGACCATATTAGAATGACAGGGACGTTTCCTTATTGA

Protein Analysis

548

Amino Acids

61.67

Weight (kDa)

5.85

Isoelectric Point (pI)

47.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1341
AccB7I CCANNNNNTGG 3 cut(s) 1169, 1189, 1547
AciI CCGC 3 cut(s) 1159, 1239, 1318
AclWI GGATC 2 cut(s) 74, 87
AcoI YGGCCR 2 cut(s) 1087, 1160
AcsI RAATTY 1 cut(s) 989
AcuI CTGAAG 1 cut(s) 1149
AdeI CACNNNGTG 1 cut(s) 1522
AfaI GTAC 3 cut(s) 530, 1474, 1603
AfiI CCNNNNNNNGG 9 cut(s) 284, 326, 368, 410, 452, 494, 1169, 1189, 1547
AflIII ACRYGT 2 cut(s) 1383, 1533
AgsI TTSAA 5 cut(s) 595, 782, 1046, 1155, 1355
AjnI CCWGG 2 cut(s) 545, 1518
AluBI AGCT 7 cut(s) 720, 858, 916, 1216, 1379, 1402, 1498
AluI AGCT 7 cut(s) 720, 858, 916, 1216, 1379, 1402, 1498
Alw26I GTCTC 2 cut(s) 276, 1100
AlwI GGATC 2 cut(s) 74, 87
AoxI GGCC 4 cut(s) 1087, 1114, 1160, 1395
ApeKI GCWGC 5 cut(s) 852, 855, 1021, 1315, 1419
ApoI RAATTY 1 cut(s) 989
AspS9I GGNCC 3 cut(s) 95, 543, 805
AsuC2I CCSGG 2 cut(s) 109, 1562
AsuHPI GGTGA 2 cut(s) 422, 1246
AsuII TTCGAA 1 cut(s) 1597
AvaII GGWCC 3 cut(s) 95, 543, 805
BaeGI GKGCMC 2 cut(s) 793, 897
BalI TGGCCA 1 cut(s) 1089
BamHI GGATCC 1 cut(s) 79
BanII GRGCYC 1 cut(s) 247
BbsI GAAGAC 1 cut(s) 1434
BbvI GCAGC 5 cut(s) 839, 867, 1033, 1302, 1431
BccI CCATC 3 cut(s) 732, 899, 1547
BcgI CGANNNNNNTGC 2 cut(s) 1419, 1453
BciT130I CCWGG 2 cut(s) 547, 1520
BciVI GTATCC 1 cut(s) 943
BcnI CCSGG 2 cut(s) 109, 1562
BcoDI GTCTC 2 cut(s) 276, 1100
BfaI CTAG 5 cut(s) 309, 923, 1289, 1376, 1391
BfmI CTRYAG 1 cut(s) 853
BfuI GTATCC 1 cut(s) 943
BglII AGATCT 1 cut(s) 1478
BisI GCNGC 7 cut(s) 853, 856, 1022, 1160, 1316, 1319, 1420
BlpI GCTNAGC 1 cut(s) 11
BlsI GCNGC 7 cut(s) 854, 857, 1023, 1161, 1317, 1320, 1421
Bme1390I CCNGG 4 cut(s) 109, 547, 1520, 1562
Bme18I GGWCC 3 cut(s) 95, 543, 805
BmgT120I GGNCC 3 cut(s) 95, 543, 805
BmiI GGNNCC 5 cut(s) 31, 81, 544, 806, 873
BmrFI CCNGG 4 cut(s) 109, 547, 1520, 1562
BmrI ACTGGG 2 cut(s) 1287, 1535
BmsI GCATC 3 cut(s) 625, 1293, 1439
BmuI ACTGGG 2 cut(s) 1287, 1535
BpiI GAAGAC 1 cut(s) 1434
BpmI CTGGAG 1 cut(s) 16
Bpu10I CCTNAGC 1 cut(s) 1414
Bpu1102I GCTNAGC 1 cut(s) 11
Bpu14I TTCGAA 1 cut(s) 1597
BpuMI CCSGG 2 cut(s) 109, 1562
BsaI GGTCTC 1 cut(s) 1100
BsaJI CCNNGG 6 cut(s) 108, 845, 1163, 1188, 1265, 1455
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 9 cut(s) 284, 326, 368, 410, 452, 494, 1169, 1189, 1547
Bse1I ACTGG 3 cut(s) 954, 1282, 1541
Bse3DI GCAATG 1 cut(s) 571
BseBI CCWGG 2 cut(s) 547, 1520
BseDI CCNNGG 6 cut(s) 108, 845, 1163, 1188, 1265, 1455
BseGI GGATG 3 cut(s) 616, 724, 793
BseLI CCNNNNNNNGG 9 cut(s) 284, 326, 368, 410, 452, 494, 1169, 1189, 1547
BseMI GCAATG 1 cut(s) 571
BseMII CTCAG 5 cut(s) 227, 561, 1095, 1428, 1496
BseNI ACTGG 3 cut(s) 954, 1282, 1541
BseRI GAGGAG 7 cut(s) 264, 306, 348, 390, 432, 474, 834
BseSI GKGCMC 2 cut(s) 793, 897
BseXI GCAGC 5 cut(s) 839, 867, 1033, 1302, 1431
BshFI GGCC 4 cut(s) 1089, 1116, 1162, 1397
BsiSI CCGG 2 cut(s) 108, 1561
BslFI GGGAC 1 cut(s) 1522
BslI CCNNNNNNNGG 9 cut(s) 284, 326, 368, 410, 452, 494, 1169, 1189, 1547
BsmAI GTCTC 2 cut(s) 276, 1100
BsmFI GGGAC 1 cut(s) 1522
BsmI GAATGC 1 cut(s) 610
BsnI GGCC 4 cut(s) 1089, 1116, 1162, 1397
Bso31I GGTCTC 1 cut(s) 1100
Bsp119I TTCGAA 1 cut(s) 1597
Bsp1286I GDGCHC 3 cut(s) 247, 793, 897
Bsp143I GATC 2 cut(s) 79, 1478
Bsp1720I GCTNAGC 1 cut(s) 11
Bsp19I CCATGG 1 cut(s) 1188
BspACI CCGC 3 cut(s) 1159, 1239, 1318
BspANI GGCC 4 cut(s) 1089, 1116, 1162, 1397
BspCNI CTCAG 5 cut(s) 226, 562, 1096, 1427, 1495
BspHI TCATGA 1 cut(s) 826
BspLI GGNNCC 5 cut(s) 31, 81, 544, 806, 873
BspMAI CTGCAG 1 cut(s) 857
BspPI GGATC 2 cut(s) 74, 87
BspQI GCTCTTC 1 cut(s) 45
BspT104I TTCGAA 1 cut(s) 1597
BspTNI GGTCTC 1 cut(s) 1100
BsrDI GCAATG 1 cut(s) 571
BsrI ACTGG 3 cut(s) 954, 1282, 1541
BssECI CCNNGG 6 cut(s) 108, 845, 1163, 1188, 1265, 1455
BssMI GATC 2 cut(s) 79, 1478
BssT1I CCWWGG 2 cut(s) 1188, 1265
Bst2UI CCWGG 2 cut(s) 547, 1520
Bst4CI ACNGT 3 cut(s) 92, 149, 1167
Bst6I CTCTTC 2 cut(s) 45, 1350
BstBI TTCGAA 1 cut(s) 1597
BstC8I GCNNGC 4 cut(s) 643, 746, 961, 1308
BstDEI CTNAG 8 cut(s) 11, 213, 570, 1104, 1340, 1414, 1482, 1606
BstDSI CCRYGG 2 cut(s) 1163, 1188
BstEII GGTNACC 2 cut(s) 1234, 1328
BstF5I GGATG 3 cut(s) 616, 724, 793
BstKTI GATC 2 cut(s) 82, 1481
BstMAI GTCTC 2 cut(s) 276, 1100
BstMBI GATC 2 cut(s) 79, 1478
BstMWI GCNNNNNNNGC 4 cut(s) 871, 1213, 1312, 1419
BstNI CCWGG 2 cut(s) 547, 1520
BstNSI RCATGY 6 cut(s) 645, 963, 1102, 1310, 1387, 1537
BstPI GGTNACC 2 cut(s) 1234, 1328
BstSCI CCNGG 4 cut(s) 107, 545, 1518, 1560
BstSFI CTRYAG 1 cut(s) 853
BstSLI GKGCMC 2 cut(s) 793, 897
BstV1I GCAGC 5 cut(s) 839, 867, 1033, 1302, 1431
BstV2I GAAGAC 1 cut(s) 1434
BstX2I RGATCY 2 cut(s) 79, 1478
BstXI CCANNNNNNTGG 1 cut(s) 1195
BstYI RGATCY 2 cut(s) 79, 1478
BsuI GTATCC 1 cut(s) 943
BsuRI GGCC 4 cut(s) 1089, 1116, 1162, 1397
BtgI CCRYGG 2 cut(s) 1163, 1188
BtgZI GCGATG 1 cut(s) 1437
BtsCI GGATG 3 cut(s) 616, 724, 793
BtsI GCAGTG 1 cut(s) 765
BtsIMutI CAGTG 2 cut(s) 765, 961
Cac8I GCNNGC 4 cut(s) 643, 746, 961, 1308
CciI TCATGA 1 cut(s) 826
Cfr13I GGNCC 3 cut(s) 95, 543, 805
CsiI ACCWGGT 1 cut(s) 1518
Csp6I GTAC 3 cut(s) 529, 1473, 1602
CviQI GTAC 3 cut(s) 529, 1473, 1602
DdeI CTNAG 8 cut(s) 11, 213, 570, 1104, 1340, 1414, 1482, 1606
DpnI GATC 2 cut(s) 81, 1480
DpnII GATC 2 cut(s) 79, 1478
DraI TTTAAA 3 cut(s) 25, 1005, 1513
DraIII CACNNNGTG 1 cut(s) 1522
DrdI GACNNNNNNGTC 1 cut(s) 1341
DseDI GACNNNNNNGTC 1 cut(s) 1341
EaeI YGGCCR 2 cut(s) 1087, 1160
Eam1104I CTCTTC 2 cut(s) 45, 1350
EarI CTCTTC 2 cut(s) 45, 1350
Eco130I CCWWGG 2 cut(s) 1188, 1265
Eco147I AGGCCT 1 cut(s) 1116
Eco24I GRGCYC 1 cut(s) 247
Eco31I GGTCTC 1 cut(s) 1100
Eco47I GGWCC 3 cut(s) 95, 543, 805
Eco57I CTGAAG 1 cut(s) 1149
Eco91I GGTNACC 2 cut(s) 1234, 1328
EcoO65I GGTNACC 2 cut(s) 1234, 1328
EcoRII CCWGG 2 cut(s) 545, 1518
EcoT14I CCWWGG 2 cut(s) 1188, 1265
EcoT22I ATGCAT 3 cut(s) 511, 1308, 1312
EcoT38I GRGCYC 1 cut(s) 247
ErhI CCWWGG 2 cut(s) 1188, 1265
FaqI GGGAC 1 cut(s) 1522
Fnu4HI GCNGC 7 cut(s) 853, 856, 1022, 1160, 1316, 1319, 1420
FokI GGATG 3 cut(s) 603, 711, 780
FriOI GRGCYC 1 cut(s) 247
Fsp4HI GCNGC 7 cut(s) 853, 856, 1022, 1160, 1316, 1319, 1420
FspBI CTAG 5 cut(s) 309, 923, 1289, 1376, 1391
GluI GCNGC 7 cut(s) 853, 856, 1022, 1160, 1316, 1319, 1420
GsuI CTGGAG 1 cut(s) 16
HaeIII GGCC 4 cut(s) 1089, 1116, 1162, 1397
HapII CCGG 2 cut(s) 108, 1561
HincII GTYRAC 1 cut(s) 1571
HindII GTYRAC 1 cut(s) 1571
HinfI GANTC 5 cut(s) 209, 269, 935, 1526, 1557
HpaII CCGG 2 cut(s) 108, 1561
HphI GGTGA 2 cut(s) 422, 1246
Hpy166II GTNNAC 2 cut(s) 95, 1571
Hpy188I TCNGA 7 cut(s) 49, 124, 261, 661, 912, 1129, 1531
Hpy188III TCNNGA 8 cut(s) 62, 620, 808, 827, 923, 932, 977, 1346
Hpy8I GTNNAC 2 cut(s) 95, 1571
Hpy99I CGWCG 1 cut(s) 1227
HpyAV CCTTC 5 cut(s) 108, 831, 992, 1067, 1462
HpyCH4III ACNGT 3 cut(s) 92, 149, 1167
HpyCH4IV ACGT 1 cut(s) 1631
HpyF10VI GCNNNNNNNGC 4 cut(s) 871, 1213, 1312, 1419
HpyF3I CTNAG 8 cut(s) 11, 213, 570, 1104, 1340, 1414, 1482, 1606
HpySE526I ACGT 1 cut(s) 1631
Kzo9I GATC 2 cut(s) 79, 1478
LguI GCTCTTC 1 cut(s) 45
LmnI GCTCC 3 cut(s) 35, 871, 1018
Lsp1109I GCAGC 5 cut(s) 839, 867, 1033, 1302, 1431
LweI GCATC 3 cut(s) 625, 1293, 1439
MabI ACCWGGT 1 cut(s) 1518
MaeI CTAG 5 cut(s) 309, 923, 1289, 1376, 1391
MaeII ACGT 1 cut(s) 1631
MaeIII GTNAC 4 cut(s) 1032, 1198, 1234, 1328
MalI GATC 2 cut(s) 81, 1480
MboI GATC 2 cut(s) 79, 1478
MflI RGATCY 2 cut(s) 79, 1478
MhlI GDGCHC 3 cut(s) 247, 793, 897
MlsI TGGCCA 1 cut(s) 1089
MluCI AATT 7 cut(s) 67, 192, 595, 654, 989, 1013, 1242
MluNI TGGCCA 1 cut(s) 1089
MlyI GAGTC 2 cut(s) 278, 929
MmeI TCCRAC 3 cut(s) 198, 782, 890
Mox20I TGGCCA 1 cut(s) 1089
Mph1103I ATGCAT 3 cut(s) 511, 1308, 1312
MscI TGGCCA 1 cut(s) 1089
MseI TTAA 6 cut(s) 24, 900, 1004, 1058, 1323, 1512
MslI CAYNNNNRTG 4 cut(s) 60, 288, 372, 1193
Msp20I TGGCCA 1 cut(s) 1089
MspA1I CMGCKG 1 cut(s) 858
MspI CCGG 2 cut(s) 108, 1561
MspR9I CCNGG 4 cut(s) 109, 547, 1520, 1562
Mva1269I GAATGC 1 cut(s) 610
MvaI CCWGG 2 cut(s) 547, 1520
MwoI GCNNNNNNNGC 4 cut(s) 871, 1213, 1312, 1419
NciI CCSGG 2 cut(s) 109, 1562
NcoI CCATGG 1 cut(s) 1188
NdeII GATC 2 cut(s) 79, 1478
NlaIV GGNNCC 5 cut(s) 31, 81, 544, 806, 873
NmeAIII GCCGAG 2 cut(s) 1423, 1436
NmuCI GTSAC 1 cut(s) 1234
NsiI ATGCAT 3 cut(s) 511, 1308, 1312
NspI RCATGY 6 cut(s) 645, 963, 1102, 1310, 1387, 1537
NspV TTCGAA 1 cut(s) 1597
PaeI GCATGC 3 cut(s) 645, 963, 1310
PagI TCATGA 1 cut(s) 826
PceI AGGCCT 1 cut(s) 1116
PciI ACATGT 2 cut(s) 1383, 1533
PciSI GCTCTTC 1 cut(s) 45
PctI GAATGC 1 cut(s) 610
PfeI GAWTC 3 cut(s) 209, 1526, 1557
PflFI GACNNNGTC 1 cut(s) 1279
PflMI CCANNNNNTGG 3 cut(s) 1169, 1189, 1547
PfoI TCCNGGA 1 cut(s) 545
PkrI GCNGC 7 cut(s) 854, 857, 1023, 1161, 1317, 1320, 1421
PleI GAGTC 2 cut(s) 277, 929
PpsI GAGTC 2 cut(s) 277, 929
PscI ACATGT 2 cut(s) 1383, 1533
Psp6I CCWGG 2 cut(s) 545, 1518
PspEI GGTNACC 2 cut(s) 1234, 1328
PspGI CCWGG 2 cut(s) 545, 1518
PspN4I GGNNCC 5 cut(s) 31, 81, 544, 806, 873
PspPI GGNCC 3 cut(s) 95, 543, 805
PstI CTGCAG 1 cut(s) 857
PsuI RGATCY 2 cut(s) 79, 1478
PsyI GACNNNGTC 1 cut(s) 1279
PvuII CAGCTG 1 cut(s) 858
RsaI GTAC 3 cut(s) 530, 1474, 1603
RsaNI GTAC 3 cut(s) 529, 1473, 1602
RseI CAYNNNNRTG 4 cut(s) 60, 288, 372, 1193
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 6 cut(s) 24, 900, 1004, 1058, 1323, 1512
SatI GCNGC 7 cut(s) 853, 856, 1022, 1160, 1316, 1319, 1420
Sau3AI GATC 2 cut(s) 79, 1478
Sau96I GGNCC 3 cut(s) 95, 543, 805
SchI GAGTC 2 cut(s) 278, 929
ScrFI CCNGG 4 cut(s) 109, 547, 1520, 1562
SduI GDGCHC 3 cut(s) 247, 793, 897
SexAI ACCWGGT 1 cut(s) 1518
SfaNI GCATC 3 cut(s) 625, 1293, 1439
SfcI CTRYAG 1 cut(s) 853
SfuI TTCGAA 1 cut(s) 1597
SinI GGWCC 3 cut(s) 95, 543, 805
SmiMI CAYNNNNRTG 4 cut(s) 60, 288, 372, 1193
SphI GCATGC 3 cut(s) 645, 963, 1310
Sse9I AATT 7 cut(s) 67, 192, 595, 654, 989, 1013, 1242
SseBI AGGCCT 1 cut(s) 1116
SsiI CCGC 3 cut(s) 1159, 1239, 1318
SspMI CTAG 5 cut(s) 309, 923, 1289, 1376, 1391
StuI AGGCCT 1 cut(s) 1116
StyD4I CCNGG 4 cut(s) 107, 545, 1518, 1560
StyI CCWWGG 2 cut(s) 1188, 1265
TaaI ACNGT 3 cut(s) 92, 149, 1167
TaiI ACGT 1 cut(s) 1634
TaqI TCGA 1 cut(s) 1597
TasI AATT 7 cut(s) 67, 192, 595, 654, 989, 1013, 1242
TatI WGTACW 1 cut(s) 528
TauI GCSGC 2 cut(s) 1162, 1321
TfiI GAWTC 3 cut(s) 209, 1526, 1557
Tru1I TTAA 6 cut(s) 24, 900, 1004, 1058, 1323, 1512
Tru9I TTAA 6 cut(s) 24, 900, 1004, 1058, 1323, 1512
TscAI CASTG 2 cut(s) 772, 961
TseFI GTSAC 1 cut(s) 1234
TseI GCWGC 5 cut(s) 852, 855, 1021, 1315, 1419
Tsp45I GTSAC 1 cut(s) 1234
TspDTI ATGAA 7 cut(s) 150, 243, 390, 843, 1011, 1025, 1077
TspGWI ACGGA 2 cut(s) 620, 1020
TspRI CASTG 2 cut(s) 772, 961
Tth111I GACNNNGTC 1 cut(s) 1279
Van91I CCANNNNNTGG 3 cut(s) 1169, 1189, 1547
VpaK11BI GGWCC 3 cut(s) 95, 543, 805
XapI RAATTY 1 cut(s) 989
XbaI TCTAGA 1 cut(s) 922
XceI RCATGY 6 cut(s) 645, 963, 1102, 1310, 1387, 1537
XcmI CCANNNNNNNNNTGG 4 cut(s) 287, 329, 413, 455
XspI CTAG 5 cut(s) 309, 923, 1289, 1376, 1391
Zsp2I ATGCAT 3 cut(s) 511, 1308, 1312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.