Protein DA1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19270 AT1G19270 |
| fragaria_vesca | FvH4_2g40390 FvH4_2g40390 FvH4_2g40390 FvH4_2g40390 |
| malus_domestica | MD00G1039600.v1.1 MD08G1037200.v1.1 |
| prunus_persica | Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1 Prupe.1G384500_v2.0.a1 |
| pyrus_communis | pycom08g02960 pycom15g02890 |
| rosa_chinensis | RchiOBHm_Chr6g0300341 |
| rosa_laevigata | RLG00000011346 |
| rosa_multiflora | Rmu_sc0001670.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00167880 |
| rosa_rugosa | Rorug06G0295000 Rorug06G0295100 Rorug06G0295200 Rorug06G0295200 |
| rosa_samantha | Rh6AG407900 Rh6BG415200 Rh6CG422600 Rh6DG408200 |
| rosa_wichuraiana | Rw6G035670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 630 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1166, 1544 |
| AciI | CCGC | 2 cut(s) | 1156, 1315 |
| AclWI | GGATC | 3 cut(s) | 74, 87, 383 |
| AcoI | YGGCCR | 3 cut(s) | 119, 1084, 1157 |
| AcsI | RAATTY | 2 cut(s) | 986, 1417 |
| AfaI | GTAC | 3 cut(s) | 527, 648, 1471 |
| AflIII | ACRYGT | 1 cut(s) | 1377 |
| AgsI | TTSAA | 9 cut(s) | 25, 262, 592, 779, 806, 1003, 1043, 1152, 1349 |
| AjnI | CCWGG | 1 cut(s) | 542 |
| AluBI | AGCT | 5 cut(s) | 717, 855, 913, 1373, 1396 |
| AluI | AGCT | 5 cut(s) | 717, 855, 913, 1373, 1396 |
| Alw26I | GTCTC | 3 cut(s) | 1097, 1226, 1542 |
| AlwI | GGATC | 3 cut(s) | 74, 87, 383 |
| AoxI | GGCC | 3 cut(s) | 119, 1084, 1157 |
| ApeKI | GCWGC | 3 cut(s) | 852, 1018, 1312 |
| ApoI | RAATTY | 2 cut(s) | 986, 1417 |
| AspS9I | GGNCC | 4 cut(s) | 95, 540, 1599, 1626 |
| AsuHPI | GGTGA | 2 cut(s) | 1243, 1511 |
| AvaII | GGWCC | 4 cut(s) | 95, 540, 1599, 1626 |
| BaeGI | GKGCMC | 1 cut(s) | 790 |
| BalI | TGGCCA | 1 cut(s) | 1086 |
| BamHI | GGATCC | 1 cut(s) | 79 |
| BanI | GGYRCC | 1 cut(s) | 630 |
| BanII | GRGCYC | 2 cut(s) | 1116, 1206 |
| BbsI | GAAGAC | 1 cut(s) | 1250 |
| BbvI | GCAGC | 3 cut(s) | 864, 1030, 1299 |
| BccI | CCATC | 5 cut(s) | 65, 86, 729, 826, 896 |
| BceAI | ACGGC | 2 cut(s) | 618, 1251 |
| BciT130I | CCWGG | 1 cut(s) | 544 |
| BciVI | GTATCC | 1 cut(s) | 940 |
| BcoDI | GTCTC | 3 cut(s) | 1097, 1226, 1542 |
| BfaI | CTAG | 4 cut(s) | 920, 1286, 1385, 1604 |
| BfuI | GTATCC | 1 cut(s) | 940 |
| BisI | GCNGC | 5 cut(s) | 853, 1019, 1157, 1313, 1316 |
| BlpI | GCTNAGC | 1 cut(s) | 11 |
| BlsI | GCNGC | 5 cut(s) | 854, 1020, 1158, 1314, 1317 |
| Bme1390I | CCNGG | 1 cut(s) | 544 |
| Bme18I | GGWCC | 4 cut(s) | 95, 540, 1599, 1626 |
| BmgT120I | GGNCC | 4 cut(s) | 95, 540, 1599, 1626 |
| BmiI | GGNNCC | 6 cut(s) | 31, 81, 541, 632, 1601, 1627 |
| BmrFI | CCNGG | 1 cut(s) | 544 |
| BmrI | ACTGGG | 2 cut(s) | 1532, 1632 |
| BmsI | GCATC | 4 cut(s) | 622, 1290, 1378, 1433 |
| BmuI | ACTGGG | 2 cut(s) | 1532, 1632 |
| BpiI | GAAGAC | 1 cut(s) | 1250 |
| BpmI | CTGGAG | 2 cut(s) | 16, 1429 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 11 |
| BsaI | GGTCTC | 1 cut(s) | 1097 |
| BsaJI | CCNNGG | 3 cut(s) | 842, 1185, 1262 |
| BsaWI | WCCGGW | 1 cut(s) | 627 |
| Bse118I | RCCGGY | 1 cut(s) | 554 |
| Bse1I | ACTGG | 3 cut(s) | 1446, 1538, 1627 |
| Bse3DI | GCAATG | 2 cut(s) | 568, 649 |
| BseBI | CCWGG | 1 cut(s) | 544 |
| BseDI | CCNNGG | 3 cut(s) | 842, 1185, 1262 |
| BseGI | GGATG | 7 cut(s) | 301, 331, 358, 418, 613, 721, 790 |
| BseMI | GCAATG | 2 cut(s) | 568, 649 |
| BseMII | CTCAG | 7 cut(s) | 227, 558, 1092, 1116, 1348, 1422, 1493 |
| BseNI | ACTGG | 3 cut(s) | 1446, 1538, 1627 |
| BseRI | GAGGAG | 8 cut(s) | 264, 297, 327, 354, 384, 444, 474, 831 |
| BseSI | GKGCMC | 1 cut(s) | 790 |
| BseXI | GCAGC | 3 cut(s) | 864, 1030, 1299 |
| BshFI | GGCC | 3 cut(s) | 121, 1086, 1159 |
| BshNI | GGYRCC | 1 cut(s) | 630 |
| BsiSI | CCGG | 3 cut(s) | 122, 555, 628 |
| BslFI | GGGAC | 2 cut(s) | 125, 890 |
| BsmAI | GTCTC | 3 cut(s) | 1097, 1226, 1542 |
| BsmBI | CGTCTC | 2 cut(s) | 1226, 1542 |
| BsmFI | GGGAC | 2 cut(s) | 125, 890 |
| BsmI | GAATGC | 3 cut(s) | 607, 626, 962 |
| BsnI | GGCC | 3 cut(s) | 121, 1086, 1159 |
| Bso31I | GGTCTC | 1 cut(s) | 1097 |
| Bsp1286I | GDGCHC | 3 cut(s) | 790, 1116, 1206 |
| Bsp143I | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 11 |
| BspACI | CCGC | 2 cut(s) | 1156, 1315 |
| BspANI | GGCC | 3 cut(s) | 121, 1086, 1159 |
| BspCNI | CTCAG | 7 cut(s) | 226, 559, 1093, 1117, 1347, 1421, 1492 |
| BspHI | TCATGA | 2 cut(s) | 61, 823 |
| BspLI | GGNNCC | 6 cut(s) | 31, 81, 541, 632, 1601, 1627 |
| BspPI | GGATC | 3 cut(s) | 74, 87, 383 |
| BspQI | GCTCTTC | 1 cut(s) | 45 |
| BspT107I | GGYRCC | 1 cut(s) | 630 |
| BspTNI | GGTCTC | 1 cut(s) | 1097 |
| BsrDI | GCAATG | 2 cut(s) | 568, 649 |
| BsrFI | RCCGGY | 1 cut(s) | 554 |
| BsrI | ACTGG | 3 cut(s) | 1446, 1538, 1627 |
| BssAI | RCCGGY | 1 cut(s) | 554 |
| BssECI | CCNNGG | 3 cut(s) | 842, 1185, 1262 |
| BssMI | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| BssT1I | CCWWGG | 1 cut(s) | 1262 |
| Bst2UI | CCWGG | 1 cut(s) | 544 |
| Bst4CI | ACNGT | 1 cut(s) | 149 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstC8I | GCNNGC | 3 cut(s) | 640, 743, 1305 |
| BstDEI | CTNAG | 9 cut(s) | 11, 213, 567, 1101, 1125, 1334, 1408, 1479, 1592 |
| BstDSI | CCRYGG | 1 cut(s) | 1185 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1124 |
| BstF5I | GGATG | 7 cut(s) | 301, 331, 358, 418, 613, 721, 790 |
| BstKTI | GATC | 4 cut(s) | 82, 391, 1478, 1521 |
| BstMAI | GTCTC | 3 cut(s) | 1097, 1226, 1542 |
| BstMBI | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 630, 639, 1309 |
| BstNI | CCWGG | 1 cut(s) | 544 |
| BstNSI | RCATGY | 4 cut(s) | 642, 1099, 1307, 1381 |
| BstSCI | CCNGG | 1 cut(s) | 542 |
| BstSLI | GKGCMC | 1 cut(s) | 790 |
| BstV1I | GCAGC | 3 cut(s) | 864, 1030, 1299 |
| BstV2I | GAAGAC | 1 cut(s) | 1250 |
| BstX2I | RGATCY | 2 cut(s) | 79, 388 |
| BstYI | RGATCY | 2 cut(s) | 79, 388 |
| BsuI | GTATCC | 1 cut(s) | 940 |
| BsuRI | GGCC | 3 cut(s) | 121, 1086, 1159 |
| BtgI | CCRYGG | 1 cut(s) | 1185 |
| BtsCI | GGATG | 7 cut(s) | 301, 331, 358, 418, 613, 721, 790 |
| BtsI | GCAGTG | 1 cut(s) | 1581 |
| BtsIMutI | CAGTG | 1 cut(s) | 1581 |
| Cac8I | GCNNGC | 3 cut(s) | 640, 743, 1305 |
| CciI | TCATGA | 2 cut(s) | 61, 823 |
| Cfr10I | RCCGGY | 1 cut(s) | 554 |
| Cfr13I | GGNCC | 4 cut(s) | 95, 540, 1599, 1626 |
| Csp6I | GTAC | 3 cut(s) | 526, 647, 1470 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 683, 718 |
| CviQI | GTAC | 3 cut(s) | 526, 647, 1470 |
| DdeI | CTNAG | 9 cut(s) | 11, 213, 567, 1101, 1125, 1334, 1408, 1479, 1592 |
| DpnI | GATC | 4 cut(s) | 81, 390, 1477, 1520 |
| DpnII | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| EaeI | YGGCCR | 3 cut(s) | 119, 1084, 1157 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco130I | CCWWGG | 1 cut(s) | 1262 |
| Eco24I | GRGCYC | 2 cut(s) | 1116, 1206 |
| Eco31I | GGTCTC | 1 cut(s) | 1097 |
| Eco47I | GGWCC | 4 cut(s) | 95, 540, 1599, 1626 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1124 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1599, 1626 |
| EcoRI | GAATTC | 2 cut(s) | 986, 1417 |
| EcoRII | CCWGG | 1 cut(s) | 542 |
| EcoT14I | CCWWGG | 1 cut(s) | 1262 |
| EcoT22I | ATGCAT | 4 cut(s) | 478, 607, 1305, 1309 |
| EcoT38I | GRGCYC | 2 cut(s) | 1116, 1206 |
| ErhI | CCWWGG | 1 cut(s) | 1262 |
| Esp3I | CGTCTC | 2 cut(s) | 1226, 1542 |
| FaqI | GGGAC | 2 cut(s) | 125, 890 |
| Fnu4HI | GCNGC | 5 cut(s) | 853, 1019, 1157, 1313, 1316 |
| FokI | GGATG | 7 cut(s) | 288, 318, 345, 405, 600, 708, 777 |
| FriOI | GRGCYC | 2 cut(s) | 1116, 1206 |
| Fsp4HI | GCNGC | 5 cut(s) | 853, 1019, 1157, 1313, 1316 |
| FspBI | CTAG | 4 cut(s) | 920, 1286, 1385, 1604 |
| GluI | GCNGC | 5 cut(s) | 853, 1019, 1157, 1313, 1316 |
| GsuI | CTGGAG | 2 cut(s) | 16, 1429 |
| HaeIII | GGCC | 3 cut(s) | 121, 1086, 1159 |
| HapII | CCGG | 3 cut(s) | 122, 555, 628 |
| HincII | GTYRAC | 1 cut(s) | 1568 |
| HindII | GTYRAC | 1 cut(s) | 1568 |
| HinfI | GANTC | 4 cut(s) | 209, 269, 932, 1332 |
| HpaII | CCGG | 3 cut(s) | 122, 555, 628 |
| HphI | GGTGA | 2 cut(s) | 1243, 1511 |
| Hpy166II | GTNNAC | 3 cut(s) | 268, 1472, 1568 |
| Hpy188I | TCNGA | 5 cut(s) | 49, 658, 909, 1126, 1411 |
| Hpy188III | TCNNGA | 6 cut(s) | 62, 617, 824, 920, 974, 1340 |
| Hpy8I | GTNNAC | 3 cut(s) | 268, 1472, 1568 |
| HpyAV | CCTTC | 7 cut(s) | 108, 989, 1064, 1346, 1406, 1459, 1590 |
| HpyCH4III | ACNGT | 1 cut(s) | 149 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 630, 639, 1309 |
| HpyF3I | CTNAG | 9 cut(s) | 11, 213, 567, 1101, 1125, 1334, 1408, 1479, 1592 |
| Kzo9I | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| LguI | GCTCTTC | 1 cut(s) | 45 |
| LmnI | GCTCC | 2 cut(s) | 35, 1015 |
| Lsp1109I | GCAGC | 3 cut(s) | 864, 1030, 1299 |
| LweI | GCATC | 4 cut(s) | 622, 1290, 1378, 1433 |
| MaeI | CTAG | 4 cut(s) | 920, 1286, 1385, 1604 |
| MaeIII | GTNAC | 1 cut(s) | 1231 |
| MalI | GATC | 4 cut(s) | 81, 390, 1477, 1520 |
| MboI | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| MboII | GAAGA | 9 cut(s) | 62, 149, 185, 233, 236, 1250, 1361, 1501, 1504 |
| MflI | RGATCY | 2 cut(s) | 79, 388 |
| MhlI | GDGCHC | 3 cut(s) | 790, 1116, 1206 |
| MlsI | TGGCCA | 1 cut(s) | 1086 |
| MluCI | AATT | 7 cut(s) | 592, 682, 986, 1146, 1239, 1417, 1453 |
| MluNI | TGGCCA | 1 cut(s) | 1086 |
| MlyI | GAGTC | 3 cut(s) | 263, 926, 1326 |
| MmeI | TCCRAC | 3 cut(s) | 198, 779, 887 |
| Mox20I | TGGCCA | 1 cut(s) | 1086 |
| Mph1103I | ATGCAT | 4 cut(s) | 478, 607, 1305, 1309 |
| MscI | TGGCCA | 1 cut(s) | 1086 |
| MseI | TTAA | 2 cut(s) | 1320, 1509 |
| MslI | CAYNNNNRTG | 3 cut(s) | 60, 828, 1190 |
| Msp20I | TGGCCA | 1 cut(s) | 1086 |
| MspA1I | CMGCKG | 1 cut(s) | 855 |
| MspI | CCGG | 3 cut(s) | 122, 555, 628 |
| MspR9I | CCNGG | 1 cut(s) | 544 |
| Mva1269I | GAATGC | 3 cut(s) | 607, 626, 962 |
| MvaI | CCWGG | 1 cut(s) | 544 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 630, 639, 1309 |
| NdeII | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| NlaIV | GGNNCC | 6 cut(s) | 31, 81, 541, 632, 1601, 1627 |
| NmeAIII | GCCGAG | 1 cut(s) | 1417 |
| NmuCI | GTSAC | 1 cut(s) | 1231 |
| NsiI | ATGCAT | 4 cut(s) | 478, 607, 1305, 1309 |
| NspI | RCATGY | 4 cut(s) | 642, 1099, 1307, 1381 |
| PaeI | GCATGC | 2 cut(s) | 642, 1307 |
| PagI | TCATGA | 2 cut(s) | 61, 823 |
| PciI | ACATGT | 1 cut(s) | 1377 |
| PciSI | GCTCTTC | 1 cut(s) | 45 |
| PctI | GAATGC | 3 cut(s) | 607, 626, 962 |
| PfeI | GAWTC | 1 cut(s) | 209 |
| PflFI | GACNNNGTC | 2 cut(s) | 1276, 1335 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1166, 1544 |
| PfoI | TCCNGGA | 1 cut(s) | 542 |
| PkrI | GCNGC | 5 cut(s) | 854, 1020, 1158, 1314, 1317 |
| PleI | GAGTC | 3 cut(s) | 263, 926, 1326 |
| PpsI | GAGTC | 3 cut(s) | 263, 926, 1326 |
| PpuMI | RGGWCCY | 2 cut(s) | 1599, 1626 |
| PscI | ACATGT | 1 cut(s) | 1377 |
| Psp5II | RGGWCCY | 2 cut(s) | 1599, 1626 |
| Psp6I | CCWGG | 1 cut(s) | 542 |
| PspGI | CCWGG | 1 cut(s) | 542 |
| PspN4I | GGNNCC | 6 cut(s) | 31, 81, 541, 632, 1601, 1627 |
| PspPI | GGNCC | 4 cut(s) | 95, 540, 1599, 1626 |
| PspPPI | RGGWCCY | 2 cut(s) | 1599, 1626 |
| PsuI | RGATCY | 2 cut(s) | 79, 388 |
| PsyI | GACNNNGTC | 2 cut(s) | 1276, 1335 |
| PvuII | CAGCTG | 1 cut(s) | 855 |
| RsaI | GTAC | 3 cut(s) | 527, 648, 1471 |
| RsaNI | GTAC | 3 cut(s) | 526, 647, 1470 |
| RseI | CAYNNNNRTG | 3 cut(s) | 60, 828, 1190 |
| SapI | GCTCTTC | 1 cut(s) | 45 |
| SaqAI | TTAA | 2 cut(s) | 1320, 1509 |
| SatI | GCNGC | 5 cut(s) | 853, 1019, 1157, 1313, 1316 |
| Sau3AI | GATC | 4 cut(s) | 79, 388, 1475, 1518 |
| Sau96I | GGNCC | 4 cut(s) | 95, 540, 1599, 1626 |
| SchI | GAGTC | 3 cut(s) | 263, 926, 1326 |
| ScrFI | CCNGG | 1 cut(s) | 544 |
| SduI | GDGCHC | 3 cut(s) | 790, 1116, 1206 |
| SfaNI | GCATC | 4 cut(s) | 622, 1290, 1378, 1433 |
| SinI | GGWCC | 4 cut(s) | 95, 540, 1599, 1626 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 60, 828, 1190 |
| SphI | GCATGC | 2 cut(s) | 642, 1307 |
| Sse9I | AATT | 7 cut(s) | 592, 682, 986, 1146, 1239, 1417, 1453 |
| SsiI | CCGC | 2 cut(s) | 1156, 1315 |
| SspI | AATATT | 2 cut(s) | 812, 1248 |
| SspMI | CTAG | 4 cut(s) | 920, 1286, 1385, 1604 |
| StyD4I | CCNGG | 1 cut(s) | 542 |
| StyI | CCWWGG | 1 cut(s) | 1262 |
| TaaI | ACNGT | 1 cut(s) | 149 |
| TaqI | TCGA | 4 cut(s) | 457, 487, 1330, 1521 |
| TasI | AATT | 7 cut(s) | 592, 682, 986, 1146, 1239, 1417, 1453 |
| TatI | WGTACW | 1 cut(s) | 525 |
| TauI | GCSGC | 2 cut(s) | 1159, 1318 |
| TfiI | GAWTC | 1 cut(s) | 209 |
| Tru1I | TTAA | 2 cut(s) | 1320, 1509 |
| Tru9I | TTAA | 2 cut(s) | 1320, 1509 |
| TscAI | CASTG | 1 cut(s) | 1581 |
| TseFI | GTSAC | 1 cut(s) | 1231 |
| TseI | GCWGC | 3 cut(s) | 852, 1018, 1312 |
| Tsp45I | GTSAC | 1 cut(s) | 1231 |
| TspDTI | ATGAA | 9 cut(s) | 150, 243, 477, 840, 1008, 1022, 1074, 1308, 1446 |
| TspGWI | ACGGA | 3 cut(s) | 483, 1202, 1566 |
| TspRI | CASTG | 1 cut(s) | 1581 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1276, 1335 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1166, 1544 |
| VpaK11BI | GGWCC | 4 cut(s) | 95, 540, 1599, 1626 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1124 |
| XapI | RAATTY | 2 cut(s) | 986, 1417 |
| XbaI | TCTAGA | 1 cut(s) | 919 |
| XceI | RCATGY | 4 cut(s) | 642, 1099, 1307, 1381 |
| XspI | CTAG | 4 cut(s) | 920, 1286, 1385, 1604 |
| Zsp2I | ATGCAT | 4 cut(s) | 478, 607, 1305, 1309 |