Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0008193

Physical Location & Seq

Genomic Coordinates Forward (+)

11252345 .. 11257459

Gene Structure 5115 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1061100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3165 bp

ATGGCCTCCAACACCATGGCCGGCTTTTTCACTGGTTCTCACGCCCGCGACGAACTCAATGTTGTGCATGCCTCTGAAGAGGACCGGCCTCCTACGAGGCAGTCAGCGTCTTCAACAAAAGTGTGTAGGGTTTGTGGAGATGAGATTGGATACAAAGAAGATGGGGAGTTGTTTGTGGCATGTCATGTGTGCGGCTTCCCAGTTTGCCGGCCTTGCTATGACTACGAAAGGAGTGAAGGCAACCAGTGCTGCCCTCAGTGCAACACTCGTTACAAGCGTCACAAAGGTTGTCCTAGAGTCGCTGGAGACGAAGATGACTTCGATGCAGATGATTTTGATGATGAGTTTCAGATCAAGATTGATCACCATGATGATCCTGCAGAACAAAATCATGTCATTGCTCGTTCGGAAAATGGAGACCACAATCAACAGCAATGGCATCGAAACGATCAACCTTTCTCTGTTGGAGGAAGTGTTGCTGGTAAGGATTTTGAAGGGGAGAAAGATGTATTGAGCACTGCAGAGTGGAAAGACAGAGTAGAGAAATGGAAAGTGAGGCAAGAAAAGAAAGGTTTGGTGAGCAAAGACGGCGGAAATGATGAACAAGGCTTGGAAGATGACTTCCTTTTGGCTGAAGCCCGCCAACCACTGTGGAGAAAAGTACCCATCTCATCAAGCAAAATCAGCCCTTACCGCATAGTCATTGTCCTCCGGCTTGTGATTCTAGCCTTTTTCTTCCGTTTCCGCATCTTAACTCCAGCGTACGATGCTTATCCCTTGTGGCTCATATCTGTAATTTGTGAGATATGGTTTGCATTTTCTTGGATACTCGATCAGTTCCCCAAATGGAACCCCATCAACCGCGAAACTTACTTAGACCGCCTGTCCATAAGGTTCGAGCGTGAGGGTGAGCCTAACACATTATCCCCAGTTGATGTCTATGTGAGTACAGTGGACCCTCTCAAGGAGCCTCCAATCATTACAGCAAACACAGTTCTCTCGATCTTGGCTGTTGACTACCCTGTTGACAAGATCTGCTGCTATGTATCGGATGACGGTGCTTCAATGCTCCTTTTCGACGCGCTATCAGAGACTGCAGAGTTTGCAAGAAGATGGGTTCCATTTTGCAAAAAACATACCATTGAGCCTAGGGCCCCCGAGTTCTATTTCTCTCAGAAGATCGATTACTTGAAGGACAAGGTACATCCGAACTTTGTGAAGGAGCGCAGAGCCATGAAGAGAGAGTACGAAGAATTCAAGGTGAGGATTAACGCATTGGTGTCGAAGGCTCTGAAGAAACCAGAAGAAGGATGGGTGATGCAGGATGGCACTCCATGGCCCGGTAACAATACTCGTGATCATCCCGGAATGATCCAGGTTTATTTGGGAAGTGAGGGTGCACTAGATGTAGATGGTAAGGAACTGCCGCGTCTTGTATATGTTTCCCGTGAGAAACGTCCTGGCTATCAACATCATAAGAAAGCTGGAGCCATGAATGCTTTGGTTCGAGTTTCTGCGGTGCTTACTAATGCACCATTCATGTTGAATCTGGATTGTGACCACTACATCAACAACAGCAAGGCTGTAAGAGAAGCTATGTGCTTCCTAATGGATCCACAGCTCGGTAAAAAGCTGTGCTATGTCCAATTCCCTCAAAGGTTCGATGGAATTGATCGTCACGACAGATATGCTAATCGAAATGTTGTCTTCTTTGATATCAACATGAGAGGCCTAGACGGGATCCAAGGACCGGTATATGTTGGGACTGGATGTGTCTTCAATAGGCAAGCATTGTATGGTTATGATCCGCCGGTTTCTGAAAAGCGACCTAAGATGACATGTGACTGCTGGCCTTCATGGTGCTTCTGTGGCTGTTGTCGCGGTAAGAAGAAATCTAAATCTAAGAAGCATGGGGTGAAAAGTCTTCTCGGGGGACTTTATTCCAAGAAGAAGAAAATGATGGGGAAGAACTACGTTAGAAAAGGGAGTGCGACAATGTTTGAACTTGAAGAGATTGAAGAAGGGTTTGAAGGTTATGATGAGTTGGAGAAATCATCACTCATGTCACAGAAAAATTTTGAGAAACGATTTGGACAATCTCCTGTTTTCATTGCTTCCACGCTTATGGAAAATGGTGGCCTTCCCGAAGGGACTAATAGCCAAACACTCGTTAAGGAGGCCATTCATGTGATAAGCATTGGCTATGAAGAAAAAACTGAATGGGGCAAAGAGATTGGGTGGATTTATGGTTCAGTTACAGAAGATATTTTGACAGGCTTCAAGATGCATTGTAGAGGATGGAGGTCAGTGTACTGCATGCCAAAGAGGCCAGCTTTCAAGGGATCTGCTCCAATAAATTTGTCCGATCGTTTGCACCAGGTTCTGAGGTGGGCTCTTGGCTCTGTCGAAATCTTCCTTAGTCGTCATTGCCCGTTGTGGTACGCCTATGGAGGAAAACTAAAATGGCTGGAGAGGCTTGCTTATACCAACACCATTGTCTATCCTTTCACTTCCATCCCCTTACTTGCCTACTGTATCGTTCCAGCCGTCTGTCTTTTGACTGGAAAATTCATCATCCCCACCTTGAATAACTTTGCTAGCATATGGTTCATGGCTCTTTTCCTCTCCATCATTGTAACCGGCATCTTAGAGCTCCGATGGAGCAATGTGAGCATTGAGGACTGGTGGCGTAATGAGCAGTTTTGGGTGATTGGTGGAGTGTCGGCACATCTTTTTGCCGTCTTCCAAGGCCTCCTCAAAGTCTTGTTCGGAGTTGACACCAATTTCACTGTCACTTCAAAAGCGGCAGACGATGCTGAGTTTGGAGAACTCTACCTCTTCAAATGGACTACTCTTCTCATACCACCAACCACACTCATTATCTTAAACATGGTGGGAGTTGTAGCTGGAGTTTCTGATGCCATTAACAATGGCTATGGTTCATGGGGTCCGTTGTTTGGCAAGCTGTTCTTCTCCTTTTGGGTCATTGTTCATCTCTACCCCTTCCTAAAAGGTTTGATGGGAAGGCAAAACAGGACTCCTACCATTGTGGTACTTTGGTCAGTTCTTCTTGCTTCCATATTCTCATTGATTTGGGTGCGAATCGATCCCTTCCTGCCCAAGCAAACTGGACCAATTCTTAAACAATGTGGTGTGGAATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1055

Amino Acids

120.18

Weight (kDa)

7.64

Isoelectric Point (pI)

37.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	37 - 107	7.2e-37	Zinc-binding RING-finger
Cellulose_synt	PF03552	311 - 1046	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	744 - 850	6.2e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44030 AT5G44030 AT5G44030
fragaria_vesca	FvH4_2g20740
malus_domestica	MD00G1061100.v1.1 MD05G1189500.v1.1 MD05G1189600.v1.1 MD05G1189700.v1.1
prunus_persica	Prupe.8G216900_v2.0.a1
pyrus_communis	pycom05g17480 pycom10g15390
rosa_chinensis	RchiOBHm_Chr6g0286921
rosa_laevigata	RLG00000012526
rosa_multiflora	Rmu_sc0002520.1_g000012 Rmu_sc0023638.1_g000001 Rmu_sc0042599.1_g000001
rosa_roxburghii	Rroxscaffold_7G00181800
rosa_rugosa	Rorug06G0185100
rosa_samantha	Rh6AG296900 Rh6BG301400 Rh6CG308900 Rh6DG292700
rosa_wichuraiana	Rw6G025610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	5 cut(s)	48, 864, 1082, 1429, 1881
AclWI	GGATC	9 cut(s)	368, 1366, 1607, 1620, 1735, 1748, 1799, 2350, 3101
AcoI	YGGCCR	1 cut(s)	18
AcsI	RAATTY	4 cut(s)	1253, 2074, 2356, 2567
AcuI	CTGAAG	3 cut(s)	96, 654, 1313
AfaI	GTAC	8 cut(s)	663, 764, 949, 1203, 1247, 2312, 2441, 3054
AfiI	CCNNNNNNNGG	6 cut(s)	964, 1307, 1340, 1622, 1750, 2957
AflIII	ACRYGT	1 cut(s)	1838
AgeI	ACCGGT	1 cut(s)	1750
AhdI	GACNNNNNGTC	1 cut(s)	883
AjnI	CCWGG	3 cut(s)	1374, 1459, 2376
AloI	GAACNNNNNNTCC	2 cut(s)	2233, 2265
AluBI	AGCT	8 cut(s)	1484, 1595, 1621, 1633, 2333, 2653, 2906, 2965
AluI	AGCT	8 cut(s)	1484, 1595, 1621, 1633, 2333, 2653, 2906, 2965
Alw21I	GWGCWC	3 cut(s)	518, 1402, 2655
Alw26I	GTCTC	3 cut(s)	300, 411, 1085
Alw44I	GTGCAC	1 cut(s)	1398
AlwI	GGATC	9 cut(s)	368, 1366, 1607, 1620, 1735, 1748, 1799, 2350, 3101
AlwNI	CAGNNNCTG	2 cut(s)	1094, 2383
Ama87I	CYCGRG	2 cut(s)	1157, 1928
ApaI	GGGCCC	1 cut(s)	1156
ApaLI	GTGCAC	1 cut(s)	1398
ApeKI	GCWGC	2 cut(s)	249, 1038
ApoI	RAATTY	4 cut(s)	1253, 2074, 2356, 2567
AsiGI	ACCGGT	1 cut(s)	1750
AspA2I	CCTAGG	1 cut(s)	1148
AspLEI	GCGC	2 cut(s)	1084, 1227
AspS9I	GGNCC	8 cut(s)	82, 955, 1152, 1153, 1338, 1748, 2948, 3131
AsuC2I	CCSGG	2 cut(s)	1341, 1365
AsuHPI	GGTGA	7 cut(s)	356, 589, 920, 1273, 1327, 1927, 2719
AsuNHI	GCTAGC	1 cut(s)	2597
AvaI	CYCGRG	2 cut(s)	1157, 1928
AvaII	GGWCC	5 cut(s)	82, 955, 1748, 2948, 3131
AvrII	CCTAGG	1 cut(s)	1148
BaeGI	GKGCMC	2 cut(s)	1156, 1402
BaeI	ACNNNNGTAYC	2 cut(s)	3044, 3077
BamHI	GGATCC	2 cut(s)	1612, 1740
BanII	GRGCYC	3 cut(s)	1156, 2395, 2655
BarI	GAAGNNNNNNTAC	4 cut(s)	1169, 1201, 1229, 1261
BauI	CACGAG	1 cut(s)	1353
BbsI	GAAGAC	5 cut(s)	102, 1699, 1768, 1916, 2734
Bbv12I	GWGCWC	3 cut(s)	518, 1402, 2655
BbvI	GCAGC	2 cut(s)	236, 1025
BceAI	ACGGC	3 cut(s)	604, 2531, 2723
BcgI	CGANNNNNNTGC	6 cut(s)	422, 456, 1263, 1297, 1670, 1704
BciT130I	CCWGG	3 cut(s)	1376, 1461, 2378
BciVI	GTATCC	2 cut(s)	143, 819
BclI	TGATCA	2 cut(s)	361, 1357
BcnI	CCSGG	2 cut(s)	1341, 1365
BcoDI	GTCTC	3 cut(s)	300, 411, 1085
BfaI	CTAG	7 cut(s)	294, 725, 1149, 1403, 1733, 2598, 3163
BfmI	CTRYAG	3 cut(s)	378, 519, 1095
BfuI	GTATCC	2 cut(s)	143, 819
BglI	GCCNNNNNGGC	1 cut(s)	2326
BglII	AGATCT	1 cut(s)	1032
BisI	GCNGC	5 cut(s)	193, 250, 1039, 1427, 2805
BlnI	CCTAGG	1 cut(s)	1148
BlsI	GCNGC	5 cut(s)	194, 251, 1040, 1428, 2806
Bme1390I	CCNGG	5 cut(s)	1341, 1365, 1376, 1461, 2378
Bme18I	GGWCC	5 cut(s)	82, 955, 1748, 2948, 3131
BmeRI	GACNNNNNGTC	1 cut(s)	883
BmeT110I	CYCGRG	2 cut(s)	1157, 1928
BmgT120I	GGNCC	8 cut(s)	82, 955, 1152, 1153, 1338, 1748, 2948, 3131
BmrFI	CCNGG	5 cut(s)	1341, 1365, 1376, 1461, 2378
BmrI	ACTGGG	2 cut(s)	194, 923
BmsI	GCATC	9 cut(s)	313, 448, 756, 757, 1308, 2274, 2652, 2803, 2908
BmtI	GCTAGC	1 cut(s)	2601
BmuI	ACTGGG	2 cut(s)	194, 923
BpiI	GAAGAC	5 cut(s)	102, 1699, 1768, 1916, 2734
BplI	GAGNNNNNCTC	2 cut(s)	2377, 2409
BpmI	CTGGAG	5 cut(s)	324, 741, 1506, 2489, 2928
BpuEI	CTTGAG	1 cut(s)	947
BpuMI	CCSGG	2 cut(s)	1341, 1365
Bsa29I	ATCGAT	2 cut(s)	1182, 3105
BsaBI	GATNNNNATC	1 cut(s)	771
BsaI	GGTCTC	1 cut(s)	411
BsaJI	CCNNGG	5 cut(s)	15, 1148, 1334, 1744, 2746
BsaWI	WCCGGW	1 cut(s)	1750
BsaXI	ACNNNNNCTCC	2 cut(s)	459, 489
Bsc4I	CCNNNNNNNGG	6 cut(s)	964, 1307, 1340, 1622, 1750, 2957
Bse118I	RCCGGY	6 cut(s)	20, 84, 207, 1750, 1810, 2639
Bse1I	ACTGG	8 cut(s)	37, 200, 244, 929, 1771, 2566, 2687, 3133
Bse3DI	GCAATG	5 cut(s)	396, 440, 2109, 2425, 2671
Bse8I	GATNNNNATC	1 cut(s)	771
BseBI	CCWGG	3 cut(s)	1376, 1461, 2378
BseCI	ATCGAT	2 cut(s)	1182, 3105
BseDI	CCNNGG	5 cut(s)	15, 1148, 1334, 1744, 2746
BseGI	GGATG	9 cut(s)	1057, 1204, 1316, 1330, 1360, 1775, 2303, 2514, 2574
BseJI	GATNNNNATC	1 cut(s)	771
BseLI	CCNNNNNNNGG	6 cut(s)	964, 1307, 1340, 1622, 1750, 2957
BseMI	GCAATG	5 cut(s)	396, 440, 2109, 2425, 2671
BseMII	CTCAG	4 cut(s)	269, 1187, 2375, 2808
BseNI	ACTGG	8 cut(s)	37, 200, 244, 929, 1771, 2566, 2687, 3133
BseRI	GAGGAG	1 cut(s)	2744
BseSI	GKGCMC	2 cut(s)	1156, 1402
BseXI	GCAGC	2 cut(s)	236, 1025
Bsh1236I	CGCG	5 cut(s)	48, 864, 1082, 1429, 1881
Bsh1285I	CGRYCG	1 cut(s)	2368
BshTI	ACCGGT	1 cut(s)	1750
BshVI	ATCGAT	2 cut(s)	1182, 3105
BsiEI	CGRYCG	1 cut(s)	2368
BsiHKAI	GWGCWC	3 cut(s)	518, 1402, 2655
BsiHKCI	CYCGRG	2 cut(s)	1157, 1928
BsiSI	CCGG	9 cut(s)	21, 85, 208, 712, 1341, 1365, 1751, 1811, 2640
BsiWI	CGTACG	1 cut(s)	762
BslFI	GGGAC	3 cut(s)	1777, 1947, 2164
BslI	CCNNNNNNNGG	6 cut(s)	964, 1307, 1340, 1622, 1750, 2957
BsmAI	GTCTC	3 cut(s)	300, 411, 1085
BsmBI	CGTCTC	1 cut(s)	300
BsmFI	GGGAC	3 cut(s)	1777, 1947, 2164
BsmI	GAATGC	2 cut(s)	1501, 3164
Bso31I	GGTCTC	1 cut(s)	411
BsoBI	CYCGRG	2 cut(s)	1157, 1928
Bsp120I	GGGCCC	1 cut(s)	1152
Bsp1286I	GDGCHC	5 cut(s)	518, 1156, 1402, 2395, 2655
Bsp19I	CCATGG	2 cut(s)	15, 1334
BspCNI	CTCAG	4 cut(s)	268, 1186, 2376, 2809
BspDI	ATCGAT	2 cut(s)	1182, 3105
BspFNI	CGCG	5 cut(s)	48, 864, 1082, 1429, 1881
BspMAI	CTGCAG	3 cut(s)	382, 523, 1099
BspOI	GCTAGC	1 cut(s)	2601
BspPI	GGATC	9 cut(s)	368, 1366, 1607, 1620, 1735, 1748, 1799, 2350, 3101
BspTNI	GGTCTC	1 cut(s)	411
BsrDI	GCAATG	5 cut(s)	396, 440, 2109, 2425, 2671
BsrFI	RCCGGY	6 cut(s)	20, 84, 207, 1750, 1810, 2639
BsrI	ACTGG	8 cut(s)	37, 200, 244, 929, 1771, 2566, 2687, 3133
BssAI	RCCGGY	6 cut(s)	20, 84, 207, 1750, 1810, 2639
BssECI	CCNNGG	5 cut(s)	15, 1148, 1334, 1744, 2746
BssSI	CACGAG	1 cut(s)	1353
BssT1I	CCWWGG	5 cut(s)	15, 1148, 1334, 1744, 2746
Bst2BI	CACGAG	1 cut(s)	1353
Bst2UI	CCWGG	3 cut(s)	1376, 1461, 2378
Bst4CI	ACNGT	6 cut(s)	651, 952, 994, 1058, 2534, 2791
Bst6I	CTCTTC	5 cut(s)	72, 1232, 2004, 2843, 2859
BstAPI	GCANNNNNTGC	3 cut(s)	246, 1103, 2813
BstDEI	CTNAG	9 cut(s)	255, 874, 1173, 1830, 1902, 2384, 2417, 2647, 2817
BstDSI	CCRYGG	2 cut(s)	15, 1334
BstF5I	GGATG	9 cut(s)	1057, 1204, 1316, 1330, 1360, 1775, 2303, 2514, 2574
BstFNI	CGCG	5 cut(s)	48, 864, 1082, 1429, 1881
BstHHI	GCGC	2 cut(s)	1084, 1227
BstMAI	GTCTC	3 cut(s)	300, 411, 1085
BstMCI	CGRYCG	1 cut(s)	2368
BstNI	CCWGG	3 cut(s)	1376, 1461, 2378
BstNSI	RCATGY	4 cut(s)	71, 183, 1842, 2320
BstSCI	CCNGG	5 cut(s)	1339, 1363, 1374, 1459, 2376
BstSFI	CTRYAG	3 cut(s)	378, 519, 1095
BstSLI	GKGCMC	2 cut(s)	1156, 1402
BstUI	CGCG	5 cut(s)	48, 864, 1082, 1429, 1881
BstV1I	GCAGC	2 cut(s)	236, 1025
BstV2I	GAAGAC	5 cut(s)	102, 1699, 1768, 1916, 2734
BstX2I	RGATCY	4 cut(s)	1032, 1612, 1740, 2342
BstXI	CCANNNNNNTGG	2 cut(s)	16, 2125
BstYI	RGATCY	4 cut(s)	1032, 1612, 1740, 2342
Bsu15I	ATCGAT	2 cut(s)	1182, 3105
BsuI	GTATCC	2 cut(s)	143, 819
BsuTUI	ATCGAT	2 cut(s)	1182, 3105
BtgI	CCRYGG	2 cut(s)	15, 1334
BtsCI	GGATG	9 cut(s)	1057, 1204, 1316, 1330, 1360, 1775, 2303, 2514, 2574
BtsI	GCAGTG	1 cut(s)	516
BtsIMutI	CAGTG	8 cut(s)	30, 251, 263, 516, 647, 957, 2313, 2787
CaiI	CAGNNNCTG	2 cut(s)	1094, 2383
CfoI	GCGC	2 cut(s)	1084, 1227
Cfr10I	RCCGGY	6 cut(s)	20, 84, 207, 1750, 1810, 2639
Cfr13I	GGNCC	8 cut(s)	82, 955, 1152, 1153, 1338, 1748, 2948, 3131
ClaI	ATCGAT	2 cut(s)	1182, 3105
CseI	GACGC	4 cut(s)	96, 266, 1088, 1418
CsiI	ACCWGGT	1 cut(s)	2376
Csp6I	GTAC	8 cut(s)	662, 763, 948, 1202, 1246, 2311, 2440, 3053
CspAI	ACCGGT	1 cut(s)	1750
CspCI	CAANNNNNGTGG	2 cut(s)	632, 667
CviQI	GTAC	8 cut(s)	662, 763, 948, 1202, 1246, 2311, 2440, 3053
DdeI	CTNAG	9 cut(s)	255, 874, 1173, 1830, 1902, 2384, 2417, 2647, 2817
DriI	GACNNNNNGTC	1 cut(s)	883
EaeI	YGGCCR	1 cut(s)	18
Eam1104I	CTCTTC	5 cut(s)	72, 1232, 2004, 2843, 2859
Eam1105I	GACNNNNNGTC	1 cut(s)	883
EarI	CTCTTC	5 cut(s)	72, 1232, 2004, 2843, 2859
EciI	GGCGGA	2 cut(s)	606, 1797
Ecl136II	GAGCTC	1 cut(s)	2653
Eco130I	CCWWGG	5 cut(s)	15, 1148, 1334, 1744, 2746
Eco147I	AGGCCT	2 cut(s)	1731, 2751
Eco24I	GRGCYC	3 cut(s)	1156, 2395, 2655
Eco31I	GGTCTC	1 cut(s)	411
Eco32I	GATATC	1 cut(s)	1717
Eco47I	GGWCC	5 cut(s)	82, 955, 1748, 2948, 3131
Eco53kI	GAGCTC	1 cut(s)	2653
Eco57I	CTGAAG	3 cut(s)	96, 654, 1313
Eco88I	CYCGRG	2 cut(s)	1157, 1928
EcoICRI	GAGCTC	1 cut(s)	2653
EcoO109I	RGGNCCY	2 cut(s)	1152, 1153
EcoRI	GAATTC	1 cut(s)	1253
EcoRII	CCWGG	3 cut(s)	1374, 1459, 2376
EcoRV	GATATC	1 cut(s)	1717
EcoT14I	CCWWGG	5 cut(s)	15, 1148, 1334, 1744, 2746
EcoT22I	ATGCAT	1 cut(s)	2289
EcoT38I	GRGCYC	3 cut(s)	1156, 2395, 2655
ErhI	CCWWGG	5 cut(s)	15, 1148, 1334, 1744, 2746
Esp3I	CGTCTC	1 cut(s)	300
FalI	AAGNNNNNCTT	2 cut(s)	2954, 2986
FaqI	GGGAC	3 cut(s)	1777, 1947, 2164
FauI	CCCGC	2 cut(s)	53, 647
FauNDI	CATATG	1 cut(s)	2603
FbaI	TGATCA	2 cut(s)	361, 1357
Fnu4HI	GCNGC	5 cut(s)	193, 250, 1039, 1427, 2805
FokI	GGATG	9 cut(s)	1064, 1191, 1323, 1337, 1347, 1782, 2310, 2501, 2561
FriOI	GRGCYC	3 cut(s)	1156, 2395, 2655
Fsp4HI	GCNGC	5 cut(s)	193, 250, 1039, 1427, 2805
FspBI	CTAG	7 cut(s)	294, 725, 1149, 1403, 1733, 2598, 3163
GlaI	GCGC	2 cut(s)	1083, 1226
GluI	GCNGC	5 cut(s)	193, 250, 1039, 1427, 2805
GsuI	CTGGAG	5 cut(s)	324, 741, 1506, 2489, 2928
HapII	CCGG	9 cut(s)	21, 85, 208, 712, 1341, 1365, 1751, 1811, 2640
HgaI	GACGC	4 cut(s)	96, 266, 1088, 1418
HhaI	GCGC	2 cut(s)	1084, 1227
Hin6I	GCGC	2 cut(s)	1082, 1225
HinP1I	GCGC	2 cut(s)	1082, 1225
HincII	GTYRAC	3 cut(s)	1015, 1027, 2776
HindII	GTYRAC	3 cut(s)	1015, 1027, 2776
HinfI	GANTC	5 cut(s)	297, 721, 1546, 3037, 3102
HpaII	CCGG	9 cut(s)	21, 85, 208, 712, 1341, 1365, 1751, 1811, 2640
HphI	GGTGA	7 cut(s)	356, 589, 920, 1273, 1327, 1927, 2719
Hpy166II	GTNNAC	6 cut(s)	955, 1015, 1027, 1400, 2311, 2776
Hpy188III	TCNNGA	7 cut(s)	355, 1000, 1355, 1550, 1679, 2144, 2281
Hpy8I	GTNNAC	6 cut(s)	955, 1015, 1027, 1400, 2311, 2776
Hpy99I	CGWCG	2 cut(s)	53, 1082
HpyCH4III	ACNGT	6 cut(s)	651, 952, 994, 1058, 2534, 2791
HpyCH4IV	ACGT	2 cut(s)	1456, 1974
HpyF3I	CTNAG	9 cut(s)	255, 874, 1173, 1830, 1902, 2384, 2417, 2647, 2817
HpySE526I	ACGT	2 cut(s)	1456, 1974
HspAI	GCGC	2 cut(s)	1082, 1225
KroI	GCCGGC	2 cut(s)	20, 207
KroNI	GCCGGC	2 cut(s)	22, 209
Ksp22I	TGATCA	2 cut(s)	361, 1357
LmnI	GCTCC	7 cut(s)	967, 1074, 1222, 1487, 2353, 2658, 2661
Lsp1109I	GCAGC	2 cut(s)	236, 1025
LweI	GCATC	9 cut(s)	313, 448, 756, 757, 1308, 2274, 2652, 2803, 2908
MabI	ACCWGGT	1 cut(s)	2376
MaeI	CTAG	7 cut(s)	294, 725, 1149, 1403, 1733, 2598, 3163
MaeII	ACGT	2 cut(s)	1456, 1974
MflI	RGATCY	4 cut(s)	1032, 1612, 1740, 2342
MhlI	GDGCHC	5 cut(s)	518, 1156, 1402, 2395, 2655
MluCI	AATT	9 cut(s)	795, 1253, 1646, 1668, 2074, 2356, 2567, 2782, 3135
MlyI	GAGTC	2 cut(s)	306, 3031
MmeI	TCCRAC	3 cut(s)	33, 445, 2025
Mph1103I	ATGCAT	1 cut(s)	2289
MroNI	GCCGGC	2 cut(s)	20, 207
MseI	TTAA	6 cut(s)	752, 1269, 2172, 2885, 2925, 3141
MslI	CAYNNNNRTG	3 cut(s)	369, 2123, 2186
MspI	CCGG	9 cut(s)	21, 85, 208, 712, 1341, 1365, 1751, 1811, 2640
MspR9I	CCNGG	5 cut(s)	1341, 1365, 1376, 1461, 2378
Mva1269I	GAATGC	2 cut(s)	1501, 3164
MvaI	CCWGG	3 cut(s)	1376, 1461, 2378
MvnI	CGCG	5 cut(s)	48, 864, 1082, 1429, 1881
NaeI	GCCGGC	2 cut(s)	22, 209
NciI	CCSGG	2 cut(s)	1341, 1365
NcoI	CCATGG	2 cut(s)	15, 1334
NdeI	CATATG	1 cut(s)	2603
NgoMIV	GCCGGC	2 cut(s)	20, 207
NheI	GCTAGC	1 cut(s)	2597
NmuCI	GTSAC	6 cut(s)	278, 1556, 1676, 1841, 2064, 2791
NsiI	ATGCAT	1 cut(s)	2289
NspI	RCATGY	4 cut(s)	71, 183, 1842, 2320
PaeI	GCATGC	2 cut(s)	71, 2320
PceI	AGGCCT	2 cut(s)	1731, 2751
PciI	ACATGT	1 cut(s)	1838
PcsI	WCGNNNNNNNCGW	4 cut(s)	48, 274, 306, 2544
PctI	GAATGC	2 cut(s)	1501, 3164
PdiI	GCCGGC	2 cut(s)	22, 209
PfeI	GAWTC	3 cut(s)	721, 1546, 3102
Pfl23II	CGTACG	1 cut(s)	762
PfoI	TCCNGGA	1 cut(s)	1363
PinAI	ACCGGT	1 cut(s)	1750
PkrI	GCNGC	5 cut(s)	194, 251, 1040, 1428, 2806
Ple19I	CGATCG	1 cut(s)	2368
PleI	GAGTC	2 cut(s)	305, 3031
PpsI	GAGTC	2 cut(s)	305, 3031
PscI	ACATGT	1 cut(s)	1838
Psp124BI	GAGCTC	1 cut(s)	2655
Psp6I	CCWGG	3 cut(s)	1374, 1459, 2376
PspGI	CCWGG	3 cut(s)	1374, 1459, 2376
PspLI	CGTACG	1 cut(s)	762
PspOMI	GGGCCC	1 cut(s)	1152
PspPI	GGNCC	8 cut(s)	82, 955, 1152, 1153, 1338, 1748, 2948, 3131
PstI	CTGCAG	3 cut(s)	382, 523, 1099
PstNI	CAGNNNCTG	2 cut(s)	1094, 2383
PsuI	RGATCY	4 cut(s)	1032, 1612, 1740, 2342
PvuI	CGATCG	1 cut(s)	2368
RsaI	GTAC	8 cut(s)	663, 764, 949, 1203, 1247, 2312, 2441, 3054
RsaNI	GTAC	8 cut(s)	662, 763, 948, 1202, 1246, 2311, 2440, 3053
RseI	CAYNNNNRTG	3 cut(s)	369, 2123, 2186
SacI	GAGCTC	1 cut(s)	2655
SaqAI	TTAA	6 cut(s)	752, 1269, 2172, 2885, 2925, 3141
SatI	GCNGC	5 cut(s)	193, 250, 1039, 1427, 2805
Sau96I	GGNCC	8 cut(s)	82, 955, 1152, 1153, 1338, 1748, 2948, 3131
SchI	GAGTC	2 cut(s)	306, 3031
ScrFI	CCNGG	5 cut(s)	1341, 1365, 1376, 1461, 2378
SduI	GDGCHC	5 cut(s)	518, 1156, 1402, 2395, 2655
SexAI	ACCWGGT	1 cut(s)	2376
SfaNI	GCATC	9 cut(s)	313, 448, 756, 757, 1308, 2274, 2652, 2803, 2908
SfcI	CTRYAG	3 cut(s)	378, 519, 1095
SinI	GGWCC	5 cut(s)	82, 955, 1748, 2948, 3131
SmiMI	CAYNNNNRTG	3 cut(s)	369, 2123, 2186
SmlI	CTYRAG	1 cut(s)	962
SmoI	CTYRAG	1 cut(s)	962
SphI	GCATGC	2 cut(s)	71, 2320
Sse9I	AATT	9 cut(s)	795, 1253, 1646, 1668, 2074, 2356, 2567, 2782, 3135
SseBI	AGGCCT	2 cut(s)	1731, 2751
SspMI	CTAG	7 cut(s)	294, 725, 1149, 1403, 1733, 2598, 3163
SstI	GAGCTC	1 cut(s)	2655
StuI	AGGCCT	2 cut(s)	1731, 2751
StyD4I	CCNGG	5 cut(s)	1339, 1363, 1374, 1459, 2376
StyI	CCWWGG	5 cut(s)	15, 1148, 1334, 1744, 2746
TaaI	ACNGT	6 cut(s)	651, 952, 994, 1058, 2534, 2791
TaiI	ACGT	2 cut(s)	1459, 1977
TasI	AATT	9 cut(s)	795, 1253, 1646, 1668, 2074, 2356, 2567, 2782, 3135
TatI	WGTACW	2 cut(s)	947, 2310
TauI	GCSGC	3 cut(s)	195, 1429, 2807
TfiI	GAWTC	3 cut(s)	721, 1546, 3102
Tru1I	TTAA	6 cut(s)	752, 1269, 2172, 2885, 2925, 3141
Tru9I	TTAA	6 cut(s)	752, 1269, 2172, 2885, 2925, 3141
TscAI	CASTG	8 cut(s)	37, 251, 263, 523, 654, 957, 2313, 2794
TseFI	GTSAC	6 cut(s)	278, 1556, 1676, 1841, 2064, 2791
TseI	GCWGC	2 cut(s)	249, 1038
Tsp45I	GTSAC	6 cut(s)	278, 1556, 1676, 1841, 2064, 2791
TspGWI	ACGGA	2 cut(s)	728, 2940
TspRI	CASTG	8 cut(s)	37, 251, 263, 523, 654, 957, 2313, 2794
VneI	GTGCAC	1 cut(s)	1398
VpaK11BI	GGWCC	5 cut(s)	82, 955, 1748, 2948, 3131
XapI	RAATTY	4 cut(s)	1253, 2074, 2356, 2567
XceI	RCATGY	4 cut(s)	71, 183, 1842, 2320
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1308, 1498
XmaJI	CCTAGG	1 cut(s)	1148
XspI	CTAG	7 cut(s)	294, 725, 1149, 1403, 1733, 2598, 3163
Zsp2I	ATGCAT	1 cut(s)	2289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.