Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0008193

Physical Location & Seq

Genomic Coordinates Forward (+)

49453336 .. 49457967

Gene Structure 4632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG296900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3168 bp

ATGGCCTCAAACTCCATGGGAGGCTTGTATACTGGTTCTCACAACCAAGGCGAAGACGAACTCCATGTGTTGCGCGCCTCTGAAGAGAACCGGCATCCAACACGGCAGTCAGTGCCGAAAGTGTGCAGAGTTTGTGGAGATGATATAGGATACAAAGAAGATGGGGAGTTGTTCGTGGCATGTCATGTGTGTGGCTTCCCAGTTTGTAGGCCTTGTTATGATTATGAGAGGAGTGAAGGCACCCAGTGTTGCCCTCAGTGCAACACTCGCTATAAGCGTCACAAAGGTTGTCCTAGAGTTGCTGGAGACGACGAAGATTTTGATGCAGATGATTTTGATGAGGAATTTCAGATTGTTAAGAATCACAATGATCATGACTCTGCTGATGAGAAAAATCATGCCATTGATATTCCTTCGGAGAATGGAGAACAGAAATGGCAAACCAATAATCAACCTTTCTCTGTTCAAGGAAGTGTTAAGGATTTTGAAGGAGACAAAGACGTTTTGGGTAGTGCAGAGTGGAAAGAAAGAGTGGAGAAGTGGAAAGTGAGGCAAGAAAAGAGAGGCTTGGTGAACAAGGATGATGGAAATGATGATGATCAAGGCCTAGAAGATGACTTCCTAATGGCTGAAGCTCGGCAACCACTATGGCGAAAAGTCCCCATCCCCTCGAGTAAAATCAGCCCTTACCGCATAGTCATTGTCATCCGGCTTGTGATTCTGGCCTTCTTTTTCCATTTCCGTATCTTAACTCCAGCCTATGATGCTTTTCCCTTGTGGCTCATATCTGTGATTTGTGAGATATGGTTTGCACTCTCATGGATACTTGACCAGTTCCCTAAATGGCAACCCATCAACCGGGAAACTTACTTGGACCGCCTAACCTTGAGGTTTGAGCGTGAGGGTGAGCCTAACACCCTAGCTCCAGTTGATGTCTATGTGAGTTCAGTGGACCCTCTCAAGGAGCCTCCAATCATTACTGCAAACACAGTTTTATCCATTTTATCTGTTGACTACCCGGTTGACAAGGTGTGCTGTTATGTTTCGGATGATGGTGCTTCAATGCTCCTCTTTGATGCACTAGCTGAGACTGCTGAGTTTGCAAGAAGATGGGTGCCATTTTGCAAAAAGCACACCATTGAGCCAAGGGCTCCTGAGTTCTATTTCTCTCAGAAGATTGATTACTTGAAGGACAAGGTTCATCCAAACTTTGTCAAGGAGCGCAGAGCCATGAAGAGAGAGTATGAAGAATTCAAAGTGAGGATTAATGCAATGGTAGCAAATGCTCTGAAGAAACCTGAAGACGGGTGGGTGATGCAGGATGGTACTCCATGGCCTGGAAACAACACTCGTGATCATCCCGGAATGATTCAGGTTTATCTGGGAAGTGAAGGAGCACTGGATGTGGATGGTAAGGAACTGCCACGTCTTGTGTATGTTTCACGTGAGAAACGTCCTGGATATCAACATCACAAGAAAGCTGGTGCCATGAATGCTATGGTTCGAGTTTCTGCAGTGCTTTCTAATGCACCTTTCATGTTGAATCTGGATTGTGACCACTACATCAACAACAGTAAGGCTATAAGAGAAGCTATGTGCTTCCTTATGGATCCCCAGCTTGGAAAGAAGCTCTGCTATGTCCAATTCCCTCAAAGGTTTGATGGTATTGATCTTCATGACAGATATGCTAATCGGAATATTGTGTTCTTTGATATCAACATGAAAGGCCTAGATGGGATTCAAGGACCGGTATATGTTGGCACAGGATGTGTCTTCAACAGGCCGGCATTGTATGGCTATGATCCGCCAGTGTCAGAAAAGCAACCTAAGATGACATGTGACTGCTGGCCTTCATGGTGCTGCTGTGGATGCTGTCGTGGGGGTTCGAAGAAGTCCAAGTCTAAGAAGGGTGGAGTAAGAAGTCTTCTTGGGGGACTTTACTCGAAGAAGAAGAAGAAAATGATGGGGAAGAACTATGTGAGGAAAGGGAGGGGACCAATGTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGTTATGATGAGTTGGAGAAATCATCTCTCATGTCACAGAAAAACTTCGAGAAACGATTTGGACAGTCCCCAGTTTTCATTGCTTCCACTCTCATGGAAAATGGTGGGCTACCTGAAGGGATTAATAGCACAGCACTTGTTAAGGAGGCCATTCATGTTATAAGTTGTGGCTATGAAGAAAAAACTGAATGGGGAAAAGAGATTGGTTGGATTTATGGTTCAGTTACAGAAGATATTTTGACTGGCTTCAAAATGCATTGTAGAGGATGGAAGTCAGTCTACTGTGTGCCAAAAAGACCAGCTTTCAAGGGATCTGCTCCTATCAATTTGTCAGATCGGCTGCACCAAGTTTTGAGATGGGCTCTTGGCTCCGTTGAAATCTTCCTCAGTCGTCATTGTCCCTTATGGTATGCCTGGGGAGGAAAGCTGAAATTGCTGGAGAGACTTGCTTACATCAACACCATAGTCTACCCTTTCACTTCCATCCCCTTACTTGCCTATTGTACCATTCCAGCTGTTTGTCTTTTGACTGGAAAGTTCATCATCCCCACACTGAACAACTTTGCCAGTATATGGTTCTTGGCTCTTTTCCTCTCCATCATTGCAACCAGTGTGTTAGAGCTCAGATGGAGCGGTGTTAGCATCGAAGACTTGTGGCGTAATGAGCAGTTTTGGGTGATCGGTGGTGTCTCTGCACATCTGTTTGCAGTCTTCCAAGGCCTCCTCAAAGTCCTTGCTGGAGTTGACACCAACTTTACAGTCACATCAAAAGCAGCAGATGATGCTGAGTTTGGGGAACTCTACCTGTTCAAATGGACTACACTACTCATACCACCAACGACCCTCATCATCTTGAACATGGTGGGAGTAGTTGCTGGAGTTTCTGATGCCATTAACAATGGATACGGCTCATGGGGTCCGTTGTTCGGAAAGCTCTTCTTTGCCTTCTGGGTCATTGTTCATCTATACCCTTTCCTCAAAGGTTTGATGGGAAGGCAAAACAGGACTCCTACCATTGTGGTACTTTGGTCAGTTCTTCTTGCCTCCATCTTCTCATTGGTTTGGGTAAGAATTGATCCCTTCTTGGCTAAGCAAACTGGACCAATTCTTAAACAATGTGGAGTGGACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1055

Amino Acids

119.67

Weight (kDa)

6.75

Isoelectric Point (pI)

36.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	33 - 107	5.8e-37	Zinc-binding RING-finger
Cellulose_synt	PF03552	310 - 1047	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	745 - 850	8.3e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44030 AT5G44030 AT5G44030
fragaria_vesca	FvH4_2g20740
malus_domestica	MD00G1061100.v1.1 MD05G1189500.v1.1 MD05G1189600.v1.1 MD05G1189700.v1.1
prunus_persica	Prupe.8G216900_v2.0.a1
pyrus_communis	pycom05g17480 pycom10g15390
rosa_chinensis	RchiOBHm_Chr6g0286921
rosa_laevigata	RLG00000012526
rosa_multiflora	Rmu_sc0002520.1_g000012 Rmu_sc0023638.1_g000001 Rmu_sc0042599.1_g000001
rosa_roxburghii	Rroxscaffold_7G00181800
rosa_rugosa	Rorug06G0185100
rosa_samantha	Rh6AG296900 Rh6BG301400 Rh6CG308900 Rh6DG292700
rosa_wichuraiana	Rw6G025610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2195
AccB1I	GGYRCC	3 cut(s)	239, 1114, 1484
AccB7I	CCANNNNNTGG	2 cut(s)	1337, 2607
AccBSI	CCGCTC	1 cut(s)	2667
AccI	GTMKAC	3 cut(s)	29, 2313, 2502
AccII	CGCG	1 cut(s)	75
AciI	CCGC	4 cut(s)	691, 877, 1805, 2667
AclWI	GGATC	5 cut(s)	1604, 1617, 1796, 2353, 3104
AcsI	RAATTY	2 cut(s)	344, 1250
AcuI	CTGAAG	5 cut(s)	102, 651, 1310, 1320, 2169
AcvI	CACGTG	1 cut(s)	1445
AdeI	CACNNNGTG	1 cut(s)	246
AfaI	GTAC	3 cut(s)	1327, 2539, 3057
AfiI	CCNNNNNNNGG	7 cut(s)	858, 961, 1304, 1337, 1619, 2607, 2960
AflIII	ACRYGT	1 cut(s)	1835
AgeI	ACCGGT	1 cut(s)	1747
AjiI	CACGTC	1 cut(s)	1427
AjnI	CCWGG	3 cut(s)	1336, 1456, 2447
AloI	GAACNNNNNNTCC	2 cut(s)	2236, 2268
Alw21I	GWGCWC	2 cut(s)	1399, 2658
Alw26I	GTCTC	5 cut(s)	300, 486, 1082, 2470, 2728
AlwI	GGATC	5 cut(s)	1604, 1617, 1796, 2353, 3104
Ama87I	CYCGRG	1 cut(s)	670
ApeKI	GCWGC	3 cut(s)	1860, 2374, 2807
ApoI	RAATTY	2 cut(s)	344, 1250
ArsI	GACNNNNNNTTYG	2 cut(s)	302, 334
AseI	ATTAAT	2 cut(s)	1266, 2157
AsiGI	ACCGGT	1 cut(s)	1747
Asp700I	GAANNNNTTC	1 cut(s)	2078
AspLEI	GCGC	3 cut(s)	75, 77, 1224
AspS9I	GGNCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
AsuC2I	CCSGG	3 cut(s)	860, 1019, 1362
AsuHPI	GGTGA	4 cut(s)	583, 917, 1324, 2722
AsuII	TTCGAA	1 cut(s)	1886
AvaI	CYCGRG	1 cut(s)	670
AvaII	GGWCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
BaeI	ACNNNNGTAYC	2 cut(s)	3047, 3080
BamHI	GGATCC	1 cut(s)	1609
BanI	GGYRCC	3 cut(s)	239, 1114, 1484
BanII	GRGCYC	3 cut(s)	1153, 2398, 2658
BarI	GAAGNNNNNNTAC	6 cut(s)	1166, 1198, 1908, 1940, 2297, 2329
BauI	CACGAG	1 cut(s)	1350
BbrPI	CACGTG	1 cut(s)	1445
BbsI	GAAGAC	6 cut(s)	60, 1308, 1765, 1916, 2688, 2737
Bbv12I	GWGCWC	2 cut(s)	1399, 2658
BbvI	GCAGC	3 cut(s)	1847, 2361, 2819
BceAI	ACGGC	2 cut(s)	119, 2956
BciT130I	CCWGG	3 cut(s)	1338, 1458, 2449
BciVI	GTATCC	3 cut(s)	143, 816, 2930
BclI	TGATCA	3 cut(s)	370, 598, 1354
BcnI	CCSGG	3 cut(s)	860, 1019, 1362
BcoDI	GTCTC	5 cut(s)	300, 486, 1082, 2470, 2728
BfaI	CTAG	5 cut(s)	294, 608, 920, 1082, 1730
BfmI	CTRYAG	1 cut(s)	1512
BfuI	GTATCC	3 cut(s)	143, 816, 2930
BisI	GCNGC	3 cut(s)	1861, 2375, 2808
BlpI	GCTNAGC	1 cut(s)	3123
BlsI	GCNGC	3 cut(s)	1862, 2376, 2809
Bme1390I	CCNGG	6 cut(s)	860, 1019, 1338, 1362, 1458, 2449
Bme18I	GGWCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
BmeT110I	CYCGRG	1 cut(s)	670
BmgBI	CACGTC	1 cut(s)	1427
BmgT120I	GGNCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
BmrFI	CCNGG	6 cut(s)	860, 1019, 1338, 1362, 1458, 2449
BmrI	ACTGGG	3 cut(s)	194, 238, 2099
BmsI	GCATC	9 cut(s)	103, 313, 754, 1066, 1305, 1859, 2685, 2806, 2911
BmuI	ACTGGG	3 cut(s)	194, 238, 2099
BpiI	GAAGAC	6 cut(s)	60, 1308, 1765, 1916, 2688, 2737
BplI	GAGNNNNNCTC	2 cut(s)	2380, 2412
BpmI	CTGGAG	6 cut(s)	324, 738, 909, 2492, 2793, 2931
Bpu1102I	GCTNAGC	1 cut(s)	3123
Bpu14I	TTCGAA	1 cut(s)	1886
BpuEI	CTTGAG	2 cut(s)	907, 944
BpuMI	CCSGG	3 cut(s)	860, 1019, 1362
BsaAI	YACGTR	1 cut(s)	1445
BsaBI	GATNNNNATC	1 cut(s)	597
BsaJI	CCNNGG	6 cut(s)	15, 46, 1145, 1331, 2448, 2749
BsaWI	WCCGGW	1 cut(s)	1747
BsaXI	ACNNNNNCTCC	2 cut(s)	907, 937
Bsc4I	CCNNNNNNNGG	7 cut(s)	858, 961, 1304, 1337, 1619, 2607, 2960
Bse118I	RCCGGY	3 cut(s)	90, 1747, 1783
Bse3DI	GCAATG	3 cut(s)	1278, 2112, 2634
Bse8I	GATNNNNATC	1 cut(s)	597
BseBI	CCWGG	3 cut(s)	1338, 1458, 2449
BseDI	CCNNGG	6 cut(s)	15, 46, 1145, 1331, 2448, 2749
BseJI	GATNNNNATC	1 cut(s)	597
BseLI	CCNNNNNNNGG	7 cut(s)	858, 961, 1304, 1337, 1619, 2607, 2960
BseMI	GCAATG	3 cut(s)	1278, 2112, 2634
BseMII	CTCAG	8 cut(s)	269, 1077, 1086, 1146, 1184, 2434, 2671, 2811
BsePI	GCGCGC	1 cut(s)	73
BseRI	GAGGAG	3 cut(s)	244, 1058, 2747
BseXI	GCAGC	3 cut(s)	1847, 2361, 2819
BseYI	CCCAGC	1 cut(s)	1614
BsgI	GTGCAG	4 cut(s)	145, 534, 2360, 2712
Bsh1236I	CGCG	1 cut(s)	75
BshNI	GGYRCC	3 cut(s)	239, 1114, 1484
BshTI	ACCGGT	1 cut(s)	1747
BsiHKAI	GWGCWC	2 cut(s)	1399, 2658
BsiHKCI	CYCGRG	1 cut(s)	670
BsiSI	CCGG	7 cut(s)	91, 709, 859, 1019, 1362, 1748, 1784
BslFI	GGGAC	5 cut(s)	644, 1947, 2007, 2086, 2418
BslI	CCNNNNNNNGG	7 cut(s)	858, 961, 1304, 1337, 1619, 2607, 2960
BsmAI	GTCTC	5 cut(s)	300, 486, 1082, 2470, 2728
BsmBI	CGTCTC	1 cut(s)	300
BsmFI	GGGAC	5 cut(s)	644, 1947, 2007, 2086, 2418
BsmI	GAATGC	1 cut(s)	1498
BsoBI	CYCGRG	1 cut(s)	670
Bsp119I	TTCGAA	1 cut(s)	1886
Bsp1286I	GDGCHC	4 cut(s)	1153, 1399, 2398, 2658
Bsp1720I	GCTNAGC	1 cut(s)	3123
Bsp19I	CCATGG	2 cut(s)	15, 1331
BspACI	CCGC	4 cut(s)	691, 877, 1805, 2667
BspCNI	CTCAG	8 cut(s)	268, 1078, 1087, 1147, 1183, 2433, 2670, 2812
BspFNI	CGCG	1 cut(s)	75
BspHI	TCATGA	2 cut(s)	373, 1675
BspMAI	CTGCAG	1 cut(s)	1516
BspPI	GGATC	5 cut(s)	1604, 1617, 1796, 2353, 3104
BspQI	GCTCTTC	1 cut(s)	2975
BspT104I	TTCGAA	1 cut(s)	1886
BspT107I	GGYRCC	3 cut(s)	239, 1114, 1484
BsrBI	CCGCTC	1 cut(s)	2667
BsrDI	GCAATG	3 cut(s)	1278, 2112, 2634
BsrFI	RCCGGY	3 cut(s)	90, 1747, 1783
BssAI	RCCGGY	3 cut(s)	90, 1747, 1783
BssECI	CCNNGG	6 cut(s)	15, 46, 1145, 1331, 2448, 2749
BssHII	GCGCGC	1 cut(s)	73
BssNAI	GTATAC	1 cut(s)	30
BssSI	CACGAG	1 cut(s)	1350
BssT1I	CCWWGG	5 cut(s)	15, 46, 1145, 1331, 2749
Bst1107I	GTATAC	1 cut(s)	30
Bst2BI	CACGAG	1 cut(s)	1350
Bst2UI	CCWGG	3 cut(s)	1338, 1458, 2449
Bst4CI	ACNGT	5 cut(s)	991, 1574, 2100, 2318, 2794
Bst6I	CTCTTC	4 cut(s)	78, 1229, 2007, 2975
BstAPI	GCANNNNNTGC	2 cut(s)	112, 2816
BstBAI	YACGTR	1 cut(s)	1445
BstBI	TTCGAA	1 cut(s)	1886
BstC8I	GCNNGC	3 cut(s)	75, 1785, 1847
BstDSI	CCRYGG	2 cut(s)	15, 1331
BstFNI	CGCG	1 cut(s)	75
BstHHI	GCGC	3 cut(s)	75, 77, 1224
BstMAI	GTCTC	5 cut(s)	300, 486, 1082, 2470, 2728
BstNI	CCWGG	3 cut(s)	1338, 1458, 2449
BstNSI	RCATGY	2 cut(s)	183, 1839
BstSCI	CCNGG	6 cut(s)	858, 1017, 1336, 1360, 1456, 2447
BstSFI	CTRYAG	1 cut(s)	1512
BstUI	CGCG	1 cut(s)	75
BstV1I	GCAGC	3 cut(s)	1847, 2361, 2819
BstV2I	GAAGAC	6 cut(s)	60, 1308, 1765, 1916, 2688, 2737
BstX2I	RGATCY	2 cut(s)	1609, 2345
BstXI	CCANNNNNNTGG	1 cut(s)	2128
BstYI	RGATCY	2 cut(s)	1609, 2345
BstZ17I	GTATAC	1 cut(s)	30
BsuI	GTATCC	3 cut(s)	143, 816, 2930
BtgI	CCRYGG	2 cut(s)	15, 1331
BtrI	CACGTC	1 cut(s)	1427
BtsI	GCAGTG	1 cut(s)	1521
BtsIMutI	CAGTG	9 cut(s)	117, 251, 263, 954, 1397, 1521, 1815, 2585, 2650
Cac8I	GCNNGC	3 cut(s)	75, 1785, 1847
CciI	TCATGA	2 cut(s)	373, 1675
CfoI	GCGC	3 cut(s)	75, 77, 1224
Cfr10I	RCCGGY	3 cut(s)	90, 1747, 1783
Cfr13I	GGNCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
CseI	GACGC	1 cut(s)	266
Csp6I	GTAC	3 cut(s)	1326, 2538, 3056
CspAI	ACCGGT	1 cut(s)	1747
CviQI	GTAC	3 cut(s)	1326, 2538, 3056
DraIII	CACNNNGTG	1 cut(s)	246
Eam1104I	CTCTTC	4 cut(s)	78, 1229, 2007, 2975
EarI	CTCTTC	4 cut(s)	78, 1229, 2007, 2975
EciI	GGCGGA	1 cut(s)	1794
Ecl136II	GAGCTC	1 cut(s)	2656
Eco130I	CCWWGG	5 cut(s)	15, 46, 1145, 1331, 2749
Eco147I	AGGCCT	4 cut(s)	211, 606, 1728, 2754
Eco24I	GRGCYC	3 cut(s)	1153, 2398, 2658
Eco32I	GATATC	2 cut(s)	1463, 1714
Eco47I	GGWCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
Eco53kI	GAGCTC	1 cut(s)	2656
Eco57I	CTGAAG	5 cut(s)	102, 651, 1310, 1320, 2169
Eco72I	CACGTG	1 cut(s)	1445
Eco88I	CYCGRG	1 cut(s)	670
EcoICRI	GAGCTC	1 cut(s)	2656
EcoRI	GAATTC	1 cut(s)	1250
EcoRII	CCWGG	3 cut(s)	1336, 1456, 2447
EcoRV	GATATC	2 cut(s)	1463, 1714
EcoT14I	CCWWGG	5 cut(s)	15, 46, 1145, 1331, 2749
EcoT22I	ATGCAT	1 cut(s)	2292
EcoT38I	GRGCYC	3 cut(s)	1153, 2398, 2658
ErhI	CCWWGG	5 cut(s)	15, 46, 1145, 1331, 2749
Esp3I	CGTCTC	1 cut(s)	300
FalI	AAGNNNNNCTT	6 cut(s)	551, 583, 2320, 2352, 2957, 2989
FaqI	GGGAC	5 cut(s)	644, 1947, 2007, 2086, 2418
FbaI	TGATCA	3 cut(s)	370, 598, 1354
FblI	GTMKAC	3 cut(s)	29, 2313, 2502
Fnu4HI	GCNGC	3 cut(s)	1861, 2375, 2808
FriOI	GRGCYC	3 cut(s)	1153, 2398, 2658
Fsp4HI	GCNGC	3 cut(s)	1861, 2375, 2808
FspBI	CTAG	5 cut(s)	294, 608, 920, 1082, 1730
GlaI	GCGC	3 cut(s)	74, 76, 1223
GluI	GCNGC	3 cut(s)	1861, 2375, 2808
GsaI	CCCAGC	1 cut(s)	1618
GsuI	CTGGAG	6 cut(s)	324, 738, 909, 2492, 2793, 2931
HapII	CCGG	7 cut(s)	91, 709, 859, 1019, 1362, 1748, 1784
HgaI	GACGC	1 cut(s)	266
HhaI	GCGC	3 cut(s)	75, 77, 1224
Hin6I	GCGC	3 cut(s)	73, 75, 1222
HinP1I	GCGC	3 cut(s)	73, 75, 1222
HincII	GTYRAC	3 cut(s)	1012, 1024, 2779
HindII	GTYRAC	3 cut(s)	1012, 1024, 2779
HinfI	GANTC	7 cut(s)	361, 377, 718, 1369, 1543, 1738, 3040
HpaII	CCGG	7 cut(s)	91, 709, 859, 1019, 1362, 1748, 1784
HphI	GGTGA	4 cut(s)	583, 917, 1324, 2722
Hpy166II	GTNNAC	9 cut(s)	30, 574, 952, 1012, 1024, 2314, 2503, 2779, 3160
Hpy188III	TCNNGA	8 cut(s)	374, 1154, 1352, 1547, 1676, 2009, 2083, 2887
Hpy8I	GTNNAC	9 cut(s)	30, 574, 952, 1012, 1024, 2314, 2503, 2779, 3160
Hpy99I	CGWCG	1 cut(s)	314
HpyCH4III	ACNGT	5 cut(s)	991, 1574, 2100, 2318, 2794
HpyCH4IV	ACGT	4 cut(s)	501, 1426, 1444, 1453
HpySE526I	ACGT	4 cut(s)	501, 1426, 1444, 1453
HspAI	GCGC	3 cut(s)	73, 75, 1222
KroI	GCCGGC	1 cut(s)	1783
KroNI	GCCGGC	1 cut(s)	1785
Ksp22I	TGATCA	3 cut(s)	370, 598, 1354
LguI	GCTCTTC	1 cut(s)	2975
LmnI	GCTCC	9 cut(s)	928, 964, 1071, 1156, 1219, 1394, 2356, 2408, 2664
Lsp1109I	GCAGC	3 cut(s)	1847, 2361, 2819
LweI	GCATC	9 cut(s)	103, 313, 754, 1066, 1305, 1859, 2685, 2806, 2911
MaeI	CTAG	5 cut(s)	294, 608, 920, 1082, 1730
MaeII	ACGT	4 cut(s)	501, 1426, 1444, 1453
MaeIII	GTNAC	6 cut(s)	278, 1553, 1838, 2067, 2257, 2794
MbiI	CCGCTC	1 cut(s)	2667
MflI	RGATCY	2 cut(s)	1609, 2345
MhlI	GDGCHC	4 cut(s)	1153, 1399, 2398, 2658
MluCI	AATT	7 cut(s)	344, 1250, 1643, 2359, 2465, 3105, 3138
MlyI	GAGTC	2 cut(s)	371, 3034
MmeI	TCCRAC	3 cut(s)	122, 2028, 2222
Mph1103I	ATGCAT	1 cut(s)	2292
MroNI	GCCGGC	1 cut(s)	1783
MroXI	GAANNNNTTC	1 cut(s)	2078
MseI	TTAA	8 cut(s)	357, 477, 749, 1266, 2157, 2175, 2928, 3144
MslI	CAYNNNNRTG	4 cut(s)	189, 788, 817, 2126
MspA1I	CMGCKG	1 cut(s)	2549
MspI	CCGG	7 cut(s)	91, 709, 859, 1019, 1362, 1748, 1784
MspR9I	CCNGG	6 cut(s)	860, 1019, 1338, 1362, 1458, 2449
Mva1269I	GAATGC	1 cut(s)	1498
MvaI	CCWGG	3 cut(s)	1338, 1458, 2449
MvnI	CGCG	1 cut(s)	75
NaeI	GCCGGC	1 cut(s)	1785
NciI	CCSGG	3 cut(s)	860, 1019, 1362
NcoI	CCATGG	2 cut(s)	15, 1331
NgoMIV	GCCGGC	1 cut(s)	1783
NmeAIII	GCCGAG	1 cut(s)	616
NmuCI	GTSAC	5 cut(s)	278, 1553, 1838, 2067, 2794
NsiI	ATGCAT	1 cut(s)	2292
NspI	RCATGY	2 cut(s)	183, 1839
NspV	TTCGAA	1 cut(s)	1886
PaeR7I	CTCGAG	1 cut(s)	670
PagI	TCATGA	2 cut(s)	373, 1675
PauI	GCGCGC	1 cut(s)	73
PceI	AGGCCT	4 cut(s)	211, 606, 1728, 2754
PciI	ACATGT	1 cut(s)	1835
PciSI	GCTCTTC	1 cut(s)	2975
PcsI	WCGNNNNNNNCGW	2 cut(s)	274, 1450
PctI	GAATGC	1 cut(s)	1498
PdiI	GCCGGC	1 cut(s)	1785
PdmI	GAANNNNTTC	1 cut(s)	2078
PfeI	GAWTC	5 cut(s)	361, 718, 1369, 1543, 1738
PflMI	CCANNNNNTGG	2 cut(s)	1337, 2607
PfoI	TCCNGGA	2 cut(s)	1360, 1456
PinAI	ACCGGT	1 cut(s)	1747
PkrI	GCNGC	3 cut(s)	1862, 2376, 2809
PleI	GAGTC	2 cut(s)	371, 3034
PmaCI	CACGTG	1 cut(s)	1445
PmlI	CACGTG	1 cut(s)	1445
PpsI	GAGTC	2 cut(s)	371, 3034
Ppu21I	YACGTR	1 cut(s)	1445
PscI	ACATGT	1 cut(s)	1835
PshBI	ATTAAT	2 cut(s)	1266, 2157
PsiI	TTATAA	1 cut(s)	2195
Psp124BI	GAGCTC	1 cut(s)	2658
Psp6I	CCWGG	3 cut(s)	1336, 1456, 2447
PspCI	CACGTG	1 cut(s)	1445
PspFI	CCCAGC	1 cut(s)	1614
PspGI	CCWGG	3 cut(s)	1336, 1456, 2447
PspPI	GGNCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
PspXI	VCTCGAGB	1 cut(s)	670
PstI	CTGCAG	1 cut(s)	1516
PsuI	RGATCY	2 cut(s)	1609, 2345
PteI	GCGCGC	1 cut(s)	73
PvuII	CAGCTG	1 cut(s)	2549
RsaI	GTAC	3 cut(s)	1327, 2539, 3057
RsaNI	GTAC	3 cut(s)	1326, 2538, 3056
RseI	CAYNNNNRTG	4 cut(s)	189, 788, 817, 2126
SacI	GAGCTC	1 cut(s)	2658
SapI	GCTCTTC	1 cut(s)	2975
SaqAI	TTAA	8 cut(s)	357, 477, 749, 1266, 2157, 2175, 2928, 3144
SatI	GCNGC	3 cut(s)	1861, 2375, 2808
Sau96I	GGNCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
SchI	GAGTC	2 cut(s)	371, 3034
ScrFI	CCNGG	6 cut(s)	860, 1019, 1338, 1362, 1458, 2449
SduI	GDGCHC	4 cut(s)	1153, 1399, 2398, 2658
SfaNI	GCATC	9 cut(s)	103, 313, 754, 1066, 1305, 1859, 2685, 2806, 2911
SfcI	CTRYAG	1 cut(s)	1512
Sfr274I	CTCGAG	1 cut(s)	670
SfuI	TTCGAA	1 cut(s)	1886
SinI	GGWCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
SlaI	CTCGAG	1 cut(s)	670
SmiMI	CAYNNNNRTG	4 cut(s)	189, 788, 817, 2126
SmlI	CTYRAG	3 cut(s)	670, 886, 959
SmoI	CTYRAG	3 cut(s)	670, 886, 959
Sse9I	AATT	7 cut(s)	344, 1250, 1643, 2359, 2465, 3105, 3138
SseBI	AGGCCT	4 cut(s)	211, 606, 1728, 2754
SsiI	CCGC	4 cut(s)	691, 877, 1805, 2667
SspI	AATATT	1 cut(s)	1699
SspMI	CTAG	5 cut(s)	294, 608, 920, 1082, 1730
SstI	GAGCTC	1 cut(s)	2658
StuI	AGGCCT	4 cut(s)	211, 606, 1728, 2754
StyD4I	CCNGG	6 cut(s)	858, 1017, 1336, 1360, 1456, 2447
StyI	CCWWGG	5 cut(s)	15, 46, 1145, 1331, 2749
TaaI	ACNGT	5 cut(s)	991, 1574, 2100, 2318, 2794
TaiI	ACGT	4 cut(s)	504, 1429, 1447, 1456
TaqI	TCGA	6 cut(s)	671, 1504, 1886, 1943, 2082, 2679
TasI	AATT	7 cut(s)	344, 1250, 1643, 2359, 2465, 3105, 3138
TfiI	GAWTC	5 cut(s)	361, 718, 1369, 1543, 1738
Tru1I	TTAA	8 cut(s)	357, 477, 749, 1266, 2157, 2175, 2928, 3144
Tru9I	TTAA	8 cut(s)	357, 477, 749, 1266, 2157, 2175, 2928, 3144
TscAI	CASTG	9 cut(s)	117, 251, 263, 954, 1404, 1521, 1815, 2592, 2650
TseFI	GTSAC	5 cut(s)	278, 1553, 1838, 2067, 2794
TseI	GCWGC	3 cut(s)	1860, 2374, 2807
Tsp45I	GTSAC	5 cut(s)	278, 1553, 1838, 2067, 2794
TspGWI	ACGGA	3 cut(s)	731, 2395, 2943
TspRI	CASTG	9 cut(s)	117, 251, 263, 954, 1404, 1521, 1815, 2592, 2650
Van91I	CCANNNNNTGG	2 cut(s)	1337, 2607
VpaK11BI	GGWCC	6 cut(s)	874, 952, 1745, 1994, 2951, 3134
VspI	ATTAAT	2 cut(s)	1266, 2157
XapI	RAATTY	2 cut(s)	344, 1250
XceI	RCATGY	2 cut(s)	183, 1839
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1495, 3088
XhoI	CTCGAG	1 cut(s)	670
XmiI	GTMKAC	3 cut(s)	29, 2313, 2502
XmnI	GAANNNNTTC	1 cut(s)	2078
XspI	CTAG	5 cut(s)	294, 608, 920, 1082, 1730
Zsp2I	ATGCAT	1 cut(s)	2292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.