Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0008193

Physical Location & Seq

Genomic Coordinates Forward (+)

31854171 .. 31859348

Gene Structure 5178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1189700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3165 bp

ATGACCTCCAACACCATGGGTGGCTTGTTCACCGGTTCTCACGCCCGCGACGAACTCCACGATGTGCATGACACTGAAGAGAACCAGCCTTCGACGAGGCAGTCAATGTCTTCAATAAAAGTGTGTAGGGTTTGTGGAGATGAGATTGGATACAAAGAAGGTGGGGAGTTGTTTGTGGCATGTCATGTGTGCGGCTTCCCGGTTTGCCGGCCTTGTTATGACTACGAAAGGAGTGAAGGCAACCAGTGTTGCCCTCAGTGCAACACTCGCTATAAGCGTCACAAAGGTTGTCCTAGAGTTGCTGGAGACGAAGATGACTTCGATGCAGATGATTTTGATGATGAGTTTCAGATCAAGATTGATCACCATGATGACCCCGCAGAACAAAATCATGTTGTTGCTCGTTCGGAAAATGGAGACCAAAATCAACAGCAATGGCATCGAAACGATCAACCTTTCTCTGTTGGAGGAAGTGTTGTTGGTAAGGATTTCGAAGGCGAGAAAGATGAATTGAGCAATGCAGAGTGGAAAGACAGAGTGGAGAAATGGAAAGTCAGGCAAGCAAAGAAAGGTTTGGTGAGCAAAGACGACGAAAATGACGACCAAGGCTTGGAAGACGACTTCCTTTTGGCTGAAGCCCGGCAACCACTGTGGCGAAAAGTACCCATCTCATCAAGCAAAATCAGCCCTTATCGCATAGTCATTGTCTGCAGGCTTGTGATTCTGGCCTTTTTCTTCCATTTTCGCATCTTAACTCCGGCATATGATGCTTTTCCCTTGTGGATCATATCTGTGATTTGTGAGATATGGTTTGGATTTTCTTGGATACTTGATCAGTTCCCCAAATGGAACCCCATCAACCGTGAAACTTACTTAGACCGCCTGTCCATAAGGTTTGAGCGTGAGGGTGAACCTAACACATTATCCCCAGTTGATGTCTATGTGAGTACAGTGGACCCTCTCAAGGAGCCTCCAATCATTACAGCAAACACGGTTCTCTCGATCTTAGCTATTGACTACCCTGTTGACAAGATCTGCTGCTATGTCTCGGATGATGGCGCTTCAATGCTCCTTTTCGACGCACTATCTGAGACTGCAGAGTTTGCAAGAAGGTGGGTGCCCTTCTGCAAAAAACATACCATTGAGCCCAGGGCCCCTGAGTTCTATTTCTCTCAGAAGATCGATTACTTGAAGGACAAGGTACATCCGAACTTTGTAAAAGAGCGCAGAGCCATGAAGAGAGAGTATGAAGAATTTAAAGTGAGGATTAACGCATTGGTGTCGAAGGCTCAGAAAAAACCAGAAGAAGGTTGGGTGATGCAGGACGGCACTCCATGGCCTGGGAACAACACTCGTGATCACCCAGGAATGATCCAGGTTTATTTGGGAAGTGAAGGAGCACTAGATGTGGATGGTAAGGAACTACCGCGTCTTGTATATGTTTCGCGTGAGAAACGTCCTGGCTATCAACATCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCAGTGCTTACTAATGCACCCTTCATGTTGAATCTGGATTGTGACCACTACATCAACAATAGTAAGGCTGTAAGAGAAGCTATGTGCTTCCTAATGGATCCACAGCTCGGAAAAAAGCTCTGCTATGTCCAATTCCCTCAAAGGTTCGATGGAATTGATCGTCACGATAGATATGCTAATCGAAATGTTGTGTTCTTTGATATCAACATGAGAGGCCTAGATGGGATCCAAGGACCAGTATATGTTGGGACTGGATGTGTCTTCAACAGGCAAGCACTGTATGGTTATGATCCGCCAGTTTCTGAAAAGCGACCTAAAATGACATGTGACTGCTGGCCTTCATGGTGCTTCTGTGGTTGTTGTCGCGGTAAGAAGAAATCTAAGTCTAAGAAGCATGGGGTGAAAAGTCTTCTTGGGGGAATTTACTCCAAGAAGAAGAAAATGATGGGGAAGAACTACATGAGAAGGGGGAGTGGAACGATGTCTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGCTATGATGAGTTGGAGAAATCTTCACTCATGTCACAGAAAAATTTCGAGAAACGATTTGGACAATCTCCGGTTTTCATTGCTTCCACTCTCATGGAAAATGGTGGCCTTCCTGAAGGGACGAATAGTCAAACACTCGTTAAGGAGGCCATTCATGTGATAAGCATTGGCTATGAAGAAAAAACTGAATGGGGAAAAGAGATTGGGTGGATTTATGGTTCTGTTACAGAAGATATTTTGACCGGCTTCAAAATGCATTGCAGAGGATGGAAGTCAGTGTATTGTATGCCAAAGAGGCCAGCTTTCAAGGGATCTGCTCCAATAAATTTGTCCGATCGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGCTCTGTCGAGATCTTCCTCAGTCGTCATTGCCCTTTGTGGTACGCCTATGGAGGAAAACTAAAATGGCTGGAGAGGCTTGCTTATATCAACACCATTGTCTATCCTTTCACTTCCATTCCCTTACTTGCTTACTGCACTGTTCCAGCCATCTGTCTTTTGACCGGAAAATTCATCATCCCCACTCTGAATAACTTTGCTAGCATATGGTTCATGGCACTTTTCCTCTCCATCATTGCAACCGGCATCTTAGAGCTCCGGTGGAGCAATGTGAGCATTGAGGACTGGTGGCGTAACGAGCAATTTTGGGTGATTGGTGGAGTCTCTGCACATCTTTTTGCCGTCTTTCAAGGCTTCCTCAAAGTCTTGTTCGGAGTTGACACTAACTTCACGGTTACATCAAAAGCGGCAGATGATGCTGAGTTTGGTGAACTCTACCTGTTCAAATGGACTACTCTTCTCATACCACCAACCACACTCATTATCTTAAACATGGTGGGAGTTGTAGCTGGAATTTCTGATGCCATTAACAATGGCTACGGCTCATGGGGTCCGTTGTTTGGCAAGCTATTTTTCTCCTTTTGGGTCATTGTTCATCTCTACCCTTTCCTCAAAGGTTTGATGGGAAGGCAAAACAGGACTCCTACCATTGTGGTTCTTTGGTCAGTTCTTCTTGCATCCATCTTCTCGTTGATTTGGGTGCGAATCGATCCCTTCTTGCCCAAGCAAACTGGACCAATCCTTAAACAATGTGGTGTGGAATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1055

Amino Acids

120.29

Weight (kDa)

6.92

Isoelectric Point (pI)

37.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	37 - 107	8.7e-36	Zinc-binding RING-finger
Cellulose_synt	PF03552	311 - 1046	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	744 - 849	1e-05	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44030 AT5G44030 AT5G44030
fragaria_vesca	FvH4_2g20740
malus_domestica	MD00G1061100.v1.1 MD05G1189500.v1.1 MD05G1189600.v1.1 MD05G1189700.v1.1
prunus_persica	Prupe.8G216900_v2.0.a1
pyrus_communis	pycom05g17480 pycom10g15390
rosa_chinensis	RchiOBHm_Chr6g0286921
rosa_laevigata	RLG00000012526
rosa_multiflora	Rmu_sc0002520.1_g000012 Rmu_sc0023638.1_g000001 Rmu_sc0042599.1_g000001
rosa_roxburghii	Rroxscaffold_7G00181800
rosa_rugosa	Rorug06G0185100
rosa_samantha	Rh6AG296900 Rh6BG301400 Rh6CG308900 Rh6DG292700
rosa_wichuraiana	Rw6G025610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	100
AccB1I	GGYRCC	2 cut(s)	1117, 1487
AccB7I	CCANNNNNTGG	2 cut(s)	610, 1340
AccII	CGCG	4 cut(s)	48, 1429, 1447, 1881
AciI	CCGC	8 cut(s)	46, 192, 378, 880, 1427, 1808, 1881, 2804
AclWI	GGATC	9 cut(s)	791, 1366, 1607, 1620, 1735, 1748, 1799, 2350, 3101
AcsI	RAATTY	6 cut(s)	1253, 1935, 2074, 2356, 2567, 2910
AcuI	CTGAAG	3 cut(s)	96, 654, 2166
AdeI	CACNNNGTG	1 cut(s)	64
AfaI	GTAC	4 cut(s)	663, 949, 1203, 2441
AfiI	CCNNNNNNNGG	6 cut(s)	610, 964, 1307, 1340, 1622, 2957
AflIII	ACRYGT	1 cut(s)	1838
AgeI	ACCGGT	1 cut(s)	32
AhdI	GACNNNNNGTC	2 cut(s)	883, 2157
AjnI	CCWGG	5 cut(s)	1148, 1339, 1363, 1374, 1459
AloI	GAACNNNNNNTCC	2 cut(s)	2233, 2265
AluBI	AGCT	9 cut(s)	1010, 1484, 1595, 1621, 1633, 2333, 2653, 2906, 2965
AluI	AGCT	9 cut(s)	1010, 1484, 1595, 1621, 1633, 2333, 2653, 2906, 2965
Alw21I	GWGCWC	2 cut(s)	1402, 2655
Alw26I	GTCTC	5 cut(s)	300, 411, 1051, 1085, 2725
AlwI	GGATC	9 cut(s)	791, 1366, 1607, 1620, 1735, 1748, 1799, 2350, 3101
AlwNI	CAGNNNCTG	1 cut(s)	1817
AoxI	GGCC	9 cut(s)	209, 726, 1152, 1337, 1729, 1850, 2137, 2178, 2327
ApaI	GGGCCC	1 cut(s)	1156
ApeKI	GCWGC	1 cut(s)	1038
ApoI	RAATTY	6 cut(s)	1253, 1935, 2074, 2356, 2567, 2910
AsiGI	ACCGGT	1 cut(s)	32
Asp700I	GAANNNNTTC	1 cut(s)	2075
AspLEI	GCGC	2 cut(s)	1061, 1227
AspS9I	GGNCC	6 cut(s)	955, 1152, 1153, 1748, 2948, 3131
AsuC2I	CCSGG	2 cut(s)	200, 640
AsuHPI	GGTGA	9 cut(s)	22, 356, 589, 920, 1327, 1352, 1927, 2719, 2837
AsuII	TTCGAA	1 cut(s)	492
AsuNHI	GCTAGC	1 cut(s)	2597
AvaII	GGWCC	4 cut(s)	955, 1748, 2948, 3131
BaeGI	GKGCMC	2 cut(s)	1122, 1156
BamHI	GGATCC	2 cut(s)	1612, 1740
BanI	GGYRCC	2 cut(s)	1117, 1487
BanII	GRGCYC	4 cut(s)	1149, 1156, 2395, 2655
BarI	GAAGNNNNNNTAC	2 cut(s)	1169, 1201
BauI	CACGAG	1 cut(s)	1353
BbsI	GAAGAC	4 cut(s)	102, 621, 1768, 1916
Bbv12I	GWGCWC	2 cut(s)	1402, 2655
BbvI	GCAGC	1 cut(s)	1025
BceAI	ACGGC	3 cut(s)	1342, 2723, 2953
BcgI	CGANNNNNNTGC	6 cut(s)	422, 456, 1263, 1297, 1670, 1704
BciT130I	CCWGG	5 cut(s)	1150, 1341, 1365, 1376, 1461
BciVI	GTATCC	2 cut(s)	143, 819
BclI	TGATCA	3 cut(s)	361, 832, 1357
BcnI	CCSGG	2 cut(s)	200, 640
BcoDI	GTCTC	5 cut(s)	300, 411, 1051, 1085, 2725
BfaI	CTAG	5 cut(s)	294, 1403, 1733, 2598, 3163
BfmI	CTRYAG	3 cut(s)	709, 1095, 1515
BfoI	RGCGCY	1 cut(s)	1062
BfuI	GTATCC	2 cut(s)	143, 819
BglI	GCCNNNNNGGC	1 cut(s)	2326
BglII	AGATCT	2 cut(s)	1032, 2409
BisI	GCNGC	3 cut(s)	193, 1039, 2805
BlsI	GCNGC	3 cut(s)	194, 1040, 2806
Bme1390I	CCNGG	7 cut(s)	200, 640, 1150, 1341, 1365, 1376, 1461
Bme18I	GGWCC	4 cut(s)	955, 1748, 2948, 3131
BmeRI	GACNNNNNGTC	2 cut(s)	883, 2157
BmgT120I	GGNCC	6 cut(s)	955, 1152, 1153, 1748, 2948, 3131
BmrFI	CCNGG	7 cut(s)	200, 640, 1150, 1341, 1365, 1376, 1461
BmrI	ACTGGG	1 cut(s)	923
BmsI	GCATC	9 cut(s)	313, 448, 756, 757, 1308, 2652, 2803, 2908, 3083
BmtI	GCTAGC	1 cut(s)	2601
BmuI	ACTGGG	1 cut(s)	923
BpiI	GAAGAC	4 cut(s)	102, 621, 1768, 1916
BplI	GAGNNNNNCTC	2 cut(s)	2377, 2409
BpmI	CTGGAG	2 cut(s)	324, 2489
Bpu14I	TTCGAA	1 cut(s)	492
BpuEI	CTTGAG	1 cut(s)	947
BpuMI	CCSGG	2 cut(s)	200, 640
Bsa29I	ATCGAT	2 cut(s)	1182, 3105
BsaI	GGTCTC	1 cut(s)	411
BsaJI	CCNNGG	8 cut(s)	15, 604, 1148, 1149, 1334, 1340, 1363, 1744
BsaWI	WCCGGW	4 cut(s)	32, 2101, 2561, 2655
BsaXI	ACNNNNNCTCC	2 cut(s)	459, 489
Bsc4I	CCNNNNNNNGG	6 cut(s)	610, 964, 1307, 1340, 1622, 2957
Bse118I	RCCGGY	4 cut(s)	32, 207, 2273, 2639
Bse1I	ACTGG	7 cut(s)	244, 929, 1751, 1771, 1811, 2687, 3133
Bse3DI	GCAATG	7 cut(s)	440, 523, 2109, 2287, 2425, 2631, 2671
BseBI	CCWGG	5 cut(s)	1150, 1341, 1365, 1376, 1461
BseCI	ATCGAT	2 cut(s)	1182, 3105
BseDI	CCNNGG	8 cut(s)	15, 604, 1148, 1149, 1334, 1340, 1363, 1744
BseGI	GGATG	7 cut(s)	1057, 1204, 1417, 1775, 2303, 2574, 3074
BseLI	CCNNNNNNNGG	6 cut(s)	610, 964, 1307, 1340, 1622, 2957
BseMI	GCAATG	7 cut(s)	440, 523, 2109, 2287, 2425, 2631, 2671
BseMII	CTCAG	8 cut(s)	269, 1080, 1149, 1187, 1304, 2375, 2431, 2808
BseNI	ACTGG	7 cut(s)	244, 929, 1751, 1771, 1811, 2687, 3133
BseSI	GKGCMC	2 cut(s)	1122, 1156
BseXI	GCAGC	1 cut(s)	1025
BsgI	GTGCAG	2 cut(s)	2518, 2709
Bsh1236I	CGCG	4 cut(s)	48, 1429, 1447, 1881
Bsh1285I	CGRYCG	1 cut(s)	2368
BshFI	GGCC	9 cut(s)	211, 728, 1154, 1339, 1731, 1852, 2139, 2180, 2329
BshNI	GGYRCC	2 cut(s)	1117, 1487
BshTI	ACCGGT	1 cut(s)	32
BshVI	ATCGAT	2 cut(s)	1182, 3105
BsiEI	CGRYCG	1 cut(s)	2368
BsiHKAI	GWGCWC	2 cut(s)	1402, 2655
BslFI	GGGAC	2 cut(s)	1777, 2164
BslI	CCNNNNNNNGG	6 cut(s)	610, 964, 1307, 1340, 1622, 2957
BsmAI	GTCTC	5 cut(s)	300, 411, 1051, 1085, 2725
BsmBI	CGTCTC	1 cut(s)	300
BsmFI	GGGAC	2 cut(s)	1777, 2164
BsmI	GAATGC	2 cut(s)	1501, 3164
BsnI	GGCC	9 cut(s)	211, 728, 1154, 1339, 1731, 1852, 2139, 2180, 2329
Bso31I	GGTCTC	1 cut(s)	411
Bsp119I	TTCGAA	1 cut(s)	492
Bsp120I	GGGCCC	1 cut(s)	1152
Bsp1286I	GDGCHC	6 cut(s)	1122, 1149, 1156, 1402, 2395, 2655
Bsp19I	CCATGG	2 cut(s)	15, 1334
BspACI	CCGC	8 cut(s)	46, 192, 378, 880, 1427, 1808, 1881, 2804
BspANI	GGCC	9 cut(s)	211, 728, 1154, 1339, 1731, 1852, 2139, 2180, 2329
BspCNI	CTCAG	8 cut(s)	268, 1081, 1150, 1186, 1303, 2376, 2430, 2809
BspDI	ATCGAT	2 cut(s)	1182, 3105
BspFNI	CGCG	4 cut(s)	48, 1429, 1447, 1881
BspMAI	CTGCAG	3 cut(s)	713, 1099, 1519
BspOI	GCTAGC	1 cut(s)	2601
BspPI	GGATC	9 cut(s)	791, 1366, 1607, 1620, 1735, 1748, 1799, 2350, 3101
BspT104I	TTCGAA	1 cut(s)	492
BspT107I	GGYRCC	2 cut(s)	1117, 1487
BspTNI	GGTCTC	1 cut(s)	411
BsrDI	GCAATG	7 cut(s)	440, 523, 2109, 2287, 2425, 2631, 2671
BsrFI	RCCGGY	4 cut(s)	32, 207, 2273, 2639
BsrI	ACTGG	7 cut(s)	244, 929, 1751, 1771, 1811, 2687, 3133
BssAI	RCCGGY	4 cut(s)	32, 207, 2273, 2639
BssECI	CCNNGG	8 cut(s)	15, 604, 1148, 1149, 1334, 1340, 1363, 1744
BssSI	CACGAG	1 cut(s)	1353
BssT1I	CCWWGG	4 cut(s)	15, 604, 1334, 1744
Bst2BI	CACGAG	1 cut(s)	1353
Bst2UI	CCWGG	5 cut(s)	1150, 1341, 1365, 1376, 1461
Bst4CI	ACNGT	7 cut(s)	651, 863, 952, 994, 1794, 2539, 2791
Bst6I	CTCTTC	4 cut(s)	72, 1232, 2004, 2859
BstAPI	GCANNNNNTGC	3 cut(s)	767, 1103, 2813
BstBI	TTCGAA	1 cut(s)	492
BstDSI	CCRYGG	2 cut(s)	15, 1334
BstF5I	GGATG	7 cut(s)	1057, 1204, 1417, 1775, 2303, 2574, 3074
BstFNI	CGCG	4 cut(s)	48, 1429, 1447, 1881
BstH2I	RGCGCY	1 cut(s)	1062
BstHHI	GCGC	2 cut(s)	1061, 1227
BstMAI	GTCTC	5 cut(s)	300, 411, 1051, 1085, 2725
BstMCI	CGRYCG	1 cut(s)	2368
BstNI	CCWGG	5 cut(s)	1150, 1341, 1365, 1376, 1461
BstNSI	RCATGY	2 cut(s)	183, 1842
BstSCI	CCNGG	7 cut(s)	198, 638, 1148, 1339, 1363, 1374, 1459
BstSFI	CTRYAG	3 cut(s)	709, 1095, 1515
BstSLI	GKGCMC	2 cut(s)	1122, 1156
BstUI	CGCG	4 cut(s)	48, 1429, 1447, 1881
BstV1I	GCAGC	1 cut(s)	1025
BstV2I	GAAGAC	4 cut(s)	102, 621, 1768, 1916
BstX2I	RGATCY	5 cut(s)	1032, 1612, 1740, 2342, 2409
BstXI	CCANNNNNNTGG	2 cut(s)	16, 2125
BstYI	RGATCY	5 cut(s)	1032, 1612, 1740, 2342, 2409
Bsu15I	ATCGAT	2 cut(s)	1182, 3105
BsuI	GTATCC	2 cut(s)	143, 819
BsuRI	GGCC	9 cut(s)	211, 728, 1154, 1339, 1731, 1852, 2139, 2180, 2329
BsuTUI	ATCGAT	2 cut(s)	1182, 3105
BtgI	CCRYGG	2 cut(s)	15, 1334
BtsCI	GGATG	7 cut(s)	1057, 1204, 1417, 1775, 2303, 2574, 3074
BtsI	GCAGTG	1 cut(s)	1524
BtsIMutI	CAGTG	9 cut(s)	72, 251, 263, 647, 957, 1524, 1790, 2313, 2535
CaiI	CAGNNNCTG	1 cut(s)	1817
CfoI	GCGC	2 cut(s)	1061, 1227
Cfr10I	RCCGGY	4 cut(s)	32, 207, 2273, 2639
Cfr13I	GGNCC	6 cut(s)	955, 1152, 1153, 1748, 2948, 3131
ClaI	ATCGAT	2 cut(s)	1182, 3105
CseI	GACGC	3 cut(s)	266, 1088, 1418
Csp6I	GTAC	4 cut(s)	662, 948, 1202, 2440
CspAI	ACCGGT	1 cut(s)	32
CspCI	CAANNNNNGTGG	4 cut(s)	142, 177, 632, 667
CviQI	GTAC	4 cut(s)	662, 948, 1202, 2440
DraI	TTTAAA	1 cut(s)	1258
DraIII	CACNNNGTG	1 cut(s)	64
DrdI	GACNNNNNNGTC	1 cut(s)	100
DriI	GACNNNNNGTC	2 cut(s)	883, 2157
DseDI	GACNNNNNNGTC	1 cut(s)	100
Eam1104I	CTCTTC	4 cut(s)	72, 1232, 2004, 2859
Eam1105I	GACNNNNNGTC	2 cut(s)	883, 2157
EarI	CTCTTC	4 cut(s)	72, 1232, 2004, 2859
EciI	GGCGGA	1 cut(s)	1797
Ecl136II	GAGCTC	1 cut(s)	2653
Eco130I	CCWWGG	4 cut(s)	15, 604, 1334, 1744
Eco147I	AGGCCT	1 cut(s)	1731
Eco24I	GRGCYC	4 cut(s)	1149, 1156, 2395, 2655
Eco31I	GGTCTC	1 cut(s)	411
Eco32I	GATATC	1 cut(s)	1717
Eco47I	GGWCC	4 cut(s)	955, 1748, 2948, 3131
Eco53kI	GAGCTC	1 cut(s)	2653
Eco57I	CTGAAG	3 cut(s)	96, 654, 2166
EcoICRI	GAGCTC	1 cut(s)	2653
EcoO109I	RGGNCCY	2 cut(s)	1152, 1153
EcoRII	CCWGG	5 cut(s)	1148, 1339, 1363, 1374, 1459
EcoRV	GATATC	1 cut(s)	1717
EcoT14I	CCWWGG	4 cut(s)	15, 604, 1334, 1744
EcoT22I	ATGCAT	1 cut(s)	2289
EcoT38I	GRGCYC	4 cut(s)	1149, 1156, 2395, 2655
ErhI	CCWWGG	4 cut(s)	15, 604, 1334, 1744
Esp3I	CGTCTC	1 cut(s)	300
FaqI	GGGAC	2 cut(s)	1777, 2164
FauI	CCCGC	2 cut(s)	53, 385
FauNDI	CATATG	2 cut(s)	763, 2603
FbaI	TGATCA	3 cut(s)	361, 832, 1357
Fnu4HI	GCNGC	3 cut(s)	193, 1039, 2805
FokI	GGATG	7 cut(s)	1064, 1191, 1424, 1782, 2310, 2561, 3061
FriOI	GRGCYC	4 cut(s)	1149, 1156, 2395, 2655
Fsp4HI	GCNGC	3 cut(s)	193, 1039, 2805
FspBI	CTAG	5 cut(s)	294, 1403, 1733, 2598, 3163
GlaI	GCGC	2 cut(s)	1060, 1226
GluI	GCNGC	3 cut(s)	193, 1039, 2805
GsuI	CTGGAG	2 cut(s)	324, 2489
HaeII	RGCGCY	1 cut(s)	1062
HaeIII	GGCC	9 cut(s)	211, 728, 1154, 1339, 1731, 1852, 2139, 2180, 2329
HgaI	GACGC	3 cut(s)	266, 1088, 1418
HhaI	GCGC	2 cut(s)	1061, 1227
Hin6I	GCGC	2 cut(s)	1059, 1225
HinP1I	GCGC	2 cut(s)	1059, 1225
HincII	GTYRAC	2 cut(s)	1027, 2776
HindII	GTYRAC	2 cut(s)	1027, 2776
HinfI	GANTC	5 cut(s)	721, 1546, 2718, 3037, 3102
HphI	GGTGA	9 cut(s)	22, 356, 589, 920, 1327, 1352, 1927, 2719, 2837
Hpy166II	GTNNAC	6 cut(s)	30, 911, 955, 1027, 2776, 2828
Hpy188III	TCNNGA	9 cut(s)	355, 1000, 1355, 1550, 1679, 2006, 2080, 2144, 2407
Hpy8I	GTNNAC	6 cut(s)	30, 911, 955, 1027, 2776, 2828
Hpy99I	CGWCG	4 cut(s)	53, 97, 593, 1082
HpyCH4III	ACNGT	7 cut(s)	651, 863, 952, 994, 1794, 2539, 2791
HpyCH4IV	ACGT	1 cut(s)	1456
HpySE526I	ACGT	1 cut(s)	1456
HspAI	GCGC	2 cut(s)	1059, 1225
KroI	GCCGGC	1 cut(s)	207
KroNI	GCCGGC	1 cut(s)	209
Ksp22I	TGATCA	3 cut(s)	361, 832, 1357
LmnI	GCTCC	6 cut(s)	967, 1074, 1397, 2353, 2658, 2661
Lsp1109I	GCAGC	1 cut(s)	1025
LweI	GCATC	9 cut(s)	313, 448, 756, 757, 1308, 2652, 2803, 2908, 3083
MaeI	CTAG	5 cut(s)	294, 1403, 1733, 2598, 3163
MaeII	ACGT	1 cut(s)	1456
MaeIII	GTNAC	8 cut(s)	278, 1556, 1676, 1841, 2064, 2254, 2690, 2791
MflI	RGATCY	5 cut(s)	1032, 1612, 1740, 2342, 2409
MhlI	GDGCHC	6 cut(s)	1122, 1149, 1156, 1402, 2395, 2655
MlyI	GAGTC	2 cut(s)	2727, 3031
MmeI	TCCRAC	3 cut(s)	33, 445, 2025
Mph1103I	ATGCAT	1 cut(s)	2289
MroNI	GCCGGC	1 cut(s)	207
MroXI	GAANNNNTTC	1 cut(s)	2075
MseI	TTAA	7 cut(s)	752, 1257, 1269, 2172, 2885, 2925, 3141
MslI	CAYNNNNRTG	4 cut(s)	369, 791, 2123, 2186
MspR9I	CCNGG	7 cut(s)	200, 640, 1150, 1341, 1365, 1376, 1461
Mva1269I	GAATGC	2 cut(s)	1501, 3164
MvaI	CCWGG	5 cut(s)	1150, 1341, 1365, 1376, 1461
MvnI	CGCG	4 cut(s)	48, 1429, 1447, 1881
NaeI	GCCGGC	1 cut(s)	209
NciI	CCSGG	2 cut(s)	200, 640
NcoI	CCATGG	2 cut(s)	15, 1334
NdeI	CATATG	2 cut(s)	763, 2603
NgoMIV	GCCGGC	1 cut(s)	207
NheI	GCTAGC	1 cut(s)	2597
NmuCI	GTSAC	5 cut(s)	278, 1556, 1676, 1841, 2064
NsiI	ATGCAT	1 cut(s)	2289
NspI	RCATGY	2 cut(s)	183, 1842
NspV	TTCGAA	1 cut(s)	492
PasI	CCCWGGG	1 cut(s)	1149
PceI	AGGCCT	1 cut(s)	1731
PciI	ACATGT	1 cut(s)	1838
PcsI	WCGNNNNNNNCGW	5 cut(s)	48, 57, 274, 597, 998
PctI	GAATGC	2 cut(s)	1501, 3164
PdiI	GCCGGC	1 cut(s)	209
PdmI	GAANNNNTTC	1 cut(s)	2075
PfeI	GAWTC	3 cut(s)	721, 1546, 3102
PflMI	CCANNNNNTGG	2 cut(s)	610, 1340
PinAI	ACCGGT	1 cut(s)	32
PkrI	GCNGC	3 cut(s)	194, 1040, 2806
Ple19I	CGATCG	1 cut(s)	2368
PleI	GAGTC	2 cut(s)	2726, 3031
PpsI	GAGTC	2 cut(s)	2726, 3031
PscI	ACATGT	1 cut(s)	1838
Psp124BI	GAGCTC	1 cut(s)	2655
Psp6I	CCWGG	5 cut(s)	1148, 1339, 1363, 1374, 1459
PspGI	CCWGG	5 cut(s)	1148, 1339, 1363, 1374, 1459
PspOMI	GGGCCC	1 cut(s)	1152
PspPI	GGNCC	6 cut(s)	955, 1152, 1153, 1748, 2948, 3131
PstI	CTGCAG	3 cut(s)	713, 1099, 1519
PstNI	CAGNNNCTG	1 cut(s)	1817
PsuI	RGATCY	5 cut(s)	1032, 1612, 1740, 2342, 2409
PvuI	CGATCG	1 cut(s)	2368
RsaI	GTAC	4 cut(s)	663, 949, 1203, 2441
RsaNI	GTAC	4 cut(s)	662, 948, 1202, 2440
RseI	CAYNNNNRTG	4 cut(s)	369, 791, 2123, 2186
SacI	GAGCTC	1 cut(s)	2655
SaqAI	TTAA	7 cut(s)	752, 1257, 1269, 2172, 2885, 2925, 3141
SatI	GCNGC	3 cut(s)	193, 1039, 2805
Sau96I	GGNCC	6 cut(s)	955, 1152, 1153, 1748, 2948, 3131
SchI	GAGTC	2 cut(s)	2727, 3031
ScrFI	CCNGG	7 cut(s)	200, 640, 1150, 1341, 1365, 1376, 1461
SduI	GDGCHC	6 cut(s)	1122, 1149, 1156, 1402, 2395, 2655
SfaNI	GCATC	9 cut(s)	313, 448, 756, 757, 1308, 2652, 2803, 2908, 3083
SfcI	CTRYAG	3 cut(s)	709, 1095, 1515
SfuI	TTCGAA	1 cut(s)	492
SinI	GGWCC	4 cut(s)	955, 1748, 2948, 3131
SmiMI	CAYNNNNRTG	4 cut(s)	369, 791, 2123, 2186
SmlI	CTYRAG	1 cut(s)	962
SmoI	CTYRAG	1 cut(s)	962
SseBI	AGGCCT	1 cut(s)	1731
SsiI	CCGC	8 cut(s)	46, 192, 378, 880, 1427, 1808, 1881, 2804
SspMI	CTAG	5 cut(s)	294, 1403, 1733, 2598, 3163
SstI	GAGCTC	1 cut(s)	2655
StuI	AGGCCT	1 cut(s)	1731
StyD4I	CCNGG	7 cut(s)	198, 638, 1148, 1339, 1363, 1374, 1459
StyI	CCWWGG	4 cut(s)	15, 604, 1334, 1744
TaaI	ACNGT	7 cut(s)	651, 863, 952, 994, 1794, 2539, 2791
TaiI	ACGT	1 cut(s)	1459
TatI	WGTACW	1 cut(s)	947
TauI	GCSGC	2 cut(s)	195, 2807
TfiI	GAWTC	3 cut(s)	721, 1546, 3102
Tru1I	TTAA	7 cut(s)	752, 1257, 1269, 2172, 2885, 2925, 3141
Tru9I	TTAA	7 cut(s)	752, 1257, 1269, 2172, 2885, 2925, 3141
TscAI	CASTG	9 cut(s)	79, 251, 263, 654, 957, 1524, 1797, 2313, 2542
TseFI	GTSAC	5 cut(s)	278, 1556, 1676, 1841, 2064
TseI	GCWGC	1 cut(s)	1038
Tsp45I	GTSAC	5 cut(s)	278, 1556, 1676, 1841, 2064
TspGWI	ACGGA	1 cut(s)	2940
TspRI	CASTG	9 cut(s)	79, 251, 263, 654, 957, 1524, 1797, 2313, 2542
Van91I	CCANNNNNTGG	2 cut(s)	610, 1340
VpaK11BI	GGWCC	4 cut(s)	955, 1748, 2948, 3131
XapI	RAATTY	6 cut(s)	1253, 1935, 2074, 2356, 2567, 2910
XceI	RCATGY	2 cut(s)	183, 1842
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1308, 1498
XmnI	GAANNNNTTC	1 cut(s)	2075
XspI	CTAG	5 cut(s)	294, 1403, 1733, 2598, 3163
Zsp2I	ATGCAT	1 cut(s)	2289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.