Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0008193

Physical Location & Seq

Genomic Coordinates Forward (+)

48971546 .. 48976135

Gene Structure 4590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G025610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3117 bp

ATGGCCTCAAACTCCATGGGAGGCTTGTATACTGGTTCTCACAACCAAGGCGAAGACGAACTCCATGTGTTGCGCGCCTCTGAAGAGAACCGGCATCCAACACGGCAGTCAGTGCCGAAAGTGTGCAGAGTTTGTGGAGATGATATAGGATACAAAGAAGATGGGGAGTTGTTCGTGGCATGTCATGTGTGTGGCTTCCCAGTTTGTAGGCCTTGTTATGATTATGAGAGGAGTGAAGGCACCCAGTGTTGCCCTCAGTGCAACACTCGCTATAAGCGTCACAAAGGTTGTCCTAGAGTTGCTGGAGACGACGAAGATTTTGATGCAGATGATTTTGATGAGGAATTTCAGATTGTTAAGAATCACAATGATCATGACTCTGCTGATGAGAAAAATCATGCCATTGATATTCCTTCGGAGAATGGAGACCATAATCAACAGAAATGGCAAACCAATAATCAACCTTTCTCTGTTCAAGGAAGTGTTAAGGATTTTGAAGGAGACAAAGACGTTTTGGGTAGTGCAGAGTGGAAAGAAAGAGTGGAGAAGTGGAAAGTGAGGCAAGAAAAGAGAGGCTTGGTGAACAAGGATGATAGAAATGATGATGATCAAGGCCTAGAAGATGACTTCCTAATGGCTGAAGCTCGGCAACCACTATGGCGAAAAGTCCCCATCCCCTCGAGTAAAATCAGCCCTTACCGCATAGTCATTGTCATCCGGCTTGTGATTCTGGCCTTCTTTTTCCATTTCCGTATCTTAACTCCAGCCTATGATGCTTTTCCCTTGTGGCTCATATCTGTGATTTGTGAGATATGGTTTGCACTCTCATGGATACTTGACCAGTTCCCTAAATGGCAACCCATCAACCGGGAAACTTACTTGGACCGCCTAACCTTGAGGTTTGAGCGTGAGGGTGAGCCTAACACCCTAGCTCCAGTTGATGTCTATGTGAGTTCAGTGGACCCTCTCAAGGAGCCTCCAATCATTACTGCAAACACAGTTTTATCCATTTTATCTGTTGACTACCCGGTTGACAAGGTGTGCTGTTATGTTTCGGATGATGGTGCTTCAATGCTCCTCTTTGATGCACTAGCTGAGACTGCTGAGTTTGCAAGAAGATGGGTGCCATTTTGCAAAAAGCACACCATTGAGCCAAGGGCTCCTGAGTTCTATTTCTCTCAGAAGATTGATTACTTGAAGGACAAGGTTCATCCAAACTTTGTCAAGGAGCGCAGAGCCATGAAGAGAGAGTATGAAGAATTCAAAGTGAGGATTAATGCAATGGTAGCAAATGCTCTGAAGAAACCTGAAGACGGGTGGGTGATGCAGGATGGTACTCCATGGCCTGGAAACAACACTCGTGATCATCCCGGAATGATTCAGGTTTATCTGGGAAGTGAAGGAGCACTGGATGTGGATGGTAAGGAACTGCCACGTCTTGTGTATGTTTCACGTGAGAAACGTCCTGGATATCAACATCACAAGAAAGCTGGTGCCATGAATGCTATGGTTCGAGTTTCTGCAGTGCTTTCTAATGCACCTTTCATGTTGAATCTGGATTGTGACCACTACATCAACAACAGTAAGGCTATAAGAGAAAAGCTCTGCTATGTCCAATTCCCTCAAAGGTTTGATGGTATTGATCTTCATGACAGATATGCTAATCGGAATATTGTGTTCTTTGATATCAACATGAAAGGCCTAGATGGGATTCAAGGACCGGTATATGTTGGCACAGGATGTGTCTTCAACAGGCCGGCATTGTATGGCTATGATCCGCCAGTGTCAGAAAAGCAACCTAAGATGACATGTGACTGCTGGCCTTCATGGTGCTGCTGTGGATGCTGTCGTGGGGGTTCGAAGAAGTCCAAGTCTAAGAAGGGTGGAAACTATGTGAGGAAAGGGAGGGGACCAATGTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGTTATGATGAGTTGGAGAAATCATCTCTCATGTCACAGAAAAACTTCGAGAAACGATTTGGACAGTCCCCGGTTTTCATTGCTTCCACTCTCATGGAAAATGGTGGGCTACCTGAAGGGATTAATAGCACAGCACTTGTTAAGGAGGCCATTCATGTTATAAGTTGTGGATATGAAGAAAAACTGAATGGGGAAAAGAGATTCAAAATACTTCATGTGGAGACTACAGAAACTAAAATGATTAATCTTGGTCTCTCTTTGCAGATTGGTTGGATTTATGGTTCAGTTACAGAAGATATTTTGACTGGCTTCAAAATGCATTGTAGAGGATGGAAGTCAGTCTACTGTGTGCCAAAAAGACCAGCTTTCAAGGGATCTGCTCCTATCAATTTGTCAGATCGGCTGCACCAAGTTTTGAGATGGGCTCTTGGCTCTGTTGAAATCTTCCTCAGTCGTCATTCTGAAATTGCTGAGAGACTTGCTTACATCAACACCATAGTCTACCCTTTCACTTCCATCCCCTTACTTGCCTATTGTACCATTCCAGCTGTTTGTCTTTTGACTGGAAAGTTCATCATCCCCACACTGAACAACTTTGCCAGTATATGGTTCTTGGCTCTTTTCCTCTCCATCATTGCAACCAGTGTGTTAGAGCTCAGATGGAGCGGTGTTAGCATTGAAGACTTGTGGCGTAATGAGCAGTTTTGGGTGATCGGTGGTGTCTCTGCACATCTGTTTGCAGTCTTCCAAGGCCTCCTCAAAGTCCTTGCTGGAGTTGACACCAACTTTACAGTCACATCAAAAGCAGCAGATGATGCTGAGTTTGGGGAACTCTACCTGTTCAAATGGACTACACTACTCATACCACCAACGACCCTTATCATCTTGAACATGGTGGGAGTAGTTGCTGGAGTTTCTGATGCCATTAACAATGGCTACGGCTCATGGGGTCCGTTGTTCGGAAAGCTCTTCTTTGCCTTCTGGGTCATTGTTCATCTATACCCTTTCCTCAAAGGTTTGATGGGAAGGCAAAACAGGACTCCTACCATTGTGGTACTTTGGTCAGTTCTTCTTGCCTCCATCTTCTCATTGGTTTGGGTAAGAATTGATCCCTTCTTGGCTAAGCAAACTGGACCAATTCTTAAACAATGTGGGGTGGACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1038

Amino Acids

117.8

Weight (kDa)

6.22

Isoelectric Point (pI)

37.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	33 - 107	5.7e-37	Zinc-binding RING-finger
Cellulose_synt	PF03552	313 - 1030	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	740 - 863	5.6e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44030 AT5G44030 AT5G44030
fragaria_vesca	FvH4_2g20740
malus_domestica	MD00G1061100.v1.1 MD05G1189500.v1.1 MD05G1189600.v1.1 MD05G1189700.v1.1
prunus_persica	Prupe.8G216900_v2.0.a1
pyrus_communis	pycom05g17480 pycom10g15390
rosa_chinensis	RchiOBHm_Chr6g0286921
rosa_laevigata	RLG00000012526
rosa_multiflora	Rmu_sc0002520.1_g000012 Rmu_sc0023638.1_g000001 Rmu_sc0042599.1_g000001
rosa_roxburghii	Rroxscaffold_7G00181800
rosa_rugosa	Rorug06G0185100
rosa_samantha	Rh6AG296900 Rh6BG301400 Rh6CG308900 Rh6DG292700
rosa_wichuraiana	Rw6G025610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2111
AccB1I	GGYRCC	3 cut(s)	239, 1123, 1493
AccB7I	CCANNNNNTGG	2 cut(s)	1346, 2556
AccBSI	CCGCTC	1 cut(s)	2616
AccI	GTMKAC	3 cut(s)	29, 2292, 2451
AccII	CGCG	1 cut(s)	75
AciI	CCGC	4 cut(s)	700, 886, 1778, 2616
AclWI	GGATC	3 cut(s)	1769, 2332, 3053
AcsI	RAATTY	2 cut(s)	344, 1259
AcuI	CTGAAG	5 cut(s)	102, 660, 1319, 1329, 2085
AcvI	CACGTG	1 cut(s)	1454
AdeI	CACNNNGTG	1 cut(s)	246
AfaI	GTAC	3 cut(s)	1336, 2488, 3006
AfiI	CCNNNNNNNGG	6 cut(s)	867, 970, 1313, 1346, 2556, 2909
AflIII	ACRYGT	1 cut(s)	1808
AgeI	ACCGGT	1 cut(s)	1720
AjiI	CACGTC	1 cut(s)	1436
AjnI	CCWGG	2 cut(s)	1345, 1465
AloI	GAACNNNNNNTCC	2 cut(s)	2215, 2247
AluBI	AGCT	9 cut(s)	644, 932, 1094, 1490, 1603, 2315, 2498, 2605, 2917
AluI	AGCT	9 cut(s)	644, 932, 1094, 1490, 1603, 2315, 2498, 2605, 2917
Alw21I	GWGCWC	2 cut(s)	1408, 2607
Alw26I	GTCTC	8 cut(s)	300, 420, 495, 1091, 2165, 2207, 2419, 2677
AlwI	GGATC	3 cut(s)	1769, 2332, 3053
Ama87I	CYCGRG	1 cut(s)	679
ApeKI	GCWGC	3 cut(s)	1833, 2353, 2756
ApoI	RAATTY	2 cut(s)	344, 1259
ArsI	GACNNNNNNTTYG	2 cut(s)	302, 334
AseI	ATTAAT	3 cut(s)	1275, 2073, 2193
AsiGI	ACCGGT	1 cut(s)	1720
Asp700I	GAANNNNTTC	1 cut(s)	1994
AspLEI	GCGC	3 cut(s)	75, 77, 1233
AspS9I	GGNCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
AsuC2I	CCSGG	4 cut(s)	869, 1028, 1371, 2021
AsuHPI	GGTGA	4 cut(s)	592, 926, 1333, 2671
AsuII	TTCGAA	1 cut(s)	1859
AvaI	CYCGRG	1 cut(s)	679
AvaII	GGWCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
BaeI	ACNNNNGTAYC	2 cut(s)	2996, 3029
BanI	GGYRCC	3 cut(s)	239, 1123, 1493
BanII	GRGCYC	3 cut(s)	1162, 2377, 2607
BarI	GAAGNNNNNNTAC	4 cut(s)	1175, 1207, 2276, 2308
BauI	CACGAG	1 cut(s)	1359
BbrPI	CACGTG	1 cut(s)	1454
BbsI	GAAGAC	5 cut(s)	60, 1317, 1738, 2637, 2686
Bbv12I	GWGCWC	2 cut(s)	1408, 2607
BbvI	GCAGC	3 cut(s)	1820, 2340, 2768
BceAI	ACGGC	2 cut(s)	119, 2905
BciT130I	CCWGG	2 cut(s)	1347, 1467
BciVI	GTATCC	2 cut(s)	143, 825
BclI	TGATCA	3 cut(s)	370, 607, 1363
BcnI	CCSGG	4 cut(s)	869, 1028, 1371, 2021
BcoDI	GTCTC	8 cut(s)	300, 420, 495, 1091, 2165, 2207, 2419, 2677
BfaI	CTAG	5 cut(s)	294, 617, 929, 1091, 1703
BfmI	CTRYAG	2 cut(s)	1521, 2175
BfuI	GTATCC	2 cut(s)	143, 825
BisI	GCNGC	3 cut(s)	1834, 2354, 2757
BlpI	GCTNAGC	1 cut(s)	3072
BlsI	GCNGC	3 cut(s)	1835, 2355, 2758
Bme1390I	CCNGG	6 cut(s)	869, 1028, 1347, 1371, 1467, 2021
Bme18I	GGWCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
BmeT110I	CYCGRG	1 cut(s)	679
BmgBI	CACGTC	1 cut(s)	1436
BmgT120I	GGNCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
BmiI	GGNNCC	8 cut(s)	241, 963, 975, 1125, 1161, 1495, 1911, 2901
BmrFI	CCNGG	6 cut(s)	869, 1028, 1347, 1371, 1467, 2021
BmrI	ACTGGG	2 cut(s)	194, 238
BmsI	GCATC	8 cut(s)	103, 313, 763, 1075, 1314, 1832, 2755, 2860
BmuI	ACTGGG	2 cut(s)	194, 238
BpiI	GAAGAC	5 cut(s)	60, 1317, 1738, 2637, 2686
BplI	GAGNNNNNCTC	4 cut(s)	1587, 1619, 2359, 2391
BpmI	CTGGAG	5 cut(s)	324, 747, 918, 2742, 2880
Bpu1102I	GCTNAGC	1 cut(s)	3072
Bpu14I	TTCGAA	1 cut(s)	1859
BpuEI	CTTGAG	2 cut(s)	916, 953
BpuMI	CCSGG	4 cut(s)	869, 1028, 1371, 2021
BsaAI	YACGTR	1 cut(s)	1454
BsaBI	GATNNNNATC	1 cut(s)	606
BsaI	GGTCTC	2 cut(s)	420, 2207
BsaJI	CCNNGG	6 cut(s)	15, 46, 1154, 1340, 2019, 2698
BsaWI	WCCGGW	1 cut(s)	1720
BsaXI	ACNNNNNCTCC	2 cut(s)	916, 946
Bsc4I	CCNNNNNNNGG	6 cut(s)	867, 970, 1313, 1346, 2556, 2909
Bse118I	RCCGGY	3 cut(s)	90, 1720, 1756
Bse3DI	GCAATG	3 cut(s)	1287, 2028, 2583
Bse8I	GATNNNNATC	1 cut(s)	606
BseBI	CCWGG	2 cut(s)	1347, 1467
BseDI	CCNNGG	6 cut(s)	15, 46, 1154, 1340, 2019, 2698
BseJI	GATNNNNATC	1 cut(s)	606
BseLI	CCNNNNNNNGG	6 cut(s)	867, 970, 1313, 1346, 2556, 2909
BseMI	GCAATG	3 cut(s)	1287, 2028, 2583
BseMII	CTCAG	9 cut(s)	269, 1086, 1095, 1155, 1193, 2412, 2413, 2620, 2760
BsePI	GCGCGC	1 cut(s)	73
BseRI	GAGGAG	3 cut(s)	244, 1067, 2696
BseXI	GCAGC	3 cut(s)	1820, 2340, 2768
BsgI	GTGCAG	4 cut(s)	145, 543, 2339, 2661
Bsh1236I	CGCG	1 cut(s)	75
BshNI	GGYRCC	3 cut(s)	239, 1123, 1493
BshTI	ACCGGT	1 cut(s)	1720
BsiHKAI	GWGCWC	2 cut(s)	1408, 2607
BsiHKCI	CYCGRG	1 cut(s)	679
BsiSI	CCGG	8 cut(s)	91, 718, 868, 1028, 1371, 1721, 1757, 2021
BslFI	GGGAC	3 cut(s)	653, 1923, 2002
BslI	CCNNNNNNNGG	6 cut(s)	867, 970, 1313, 1346, 2556, 2909
BsmAI	GTCTC	8 cut(s)	300, 420, 495, 1091, 2165, 2207, 2419, 2677
BsmBI	CGTCTC	1 cut(s)	300
BsmFI	GGGAC	3 cut(s)	653, 1923, 2002
BsmI	GAATGC	1 cut(s)	1507
Bso31I	GGTCTC	2 cut(s)	420, 2207
BsoBI	CYCGRG	1 cut(s)	679
Bsp119I	TTCGAA	1 cut(s)	1859
Bsp1286I	GDGCHC	4 cut(s)	1162, 1408, 2377, 2607
Bsp1720I	GCTNAGC	1 cut(s)	3072
Bsp19I	CCATGG	2 cut(s)	15, 1340
BspACI	CCGC	4 cut(s)	700, 886, 1778, 2616
BspCNI	CTCAG	9 cut(s)	268, 1087, 1096, 1156, 1192, 2412, 2413, 2619, 2761
BspFNI	CGCG	1 cut(s)	75
BspHI	TCATGA	2 cut(s)	373, 1648
BspLI	GGNNCC	8 cut(s)	241, 963, 975, 1125, 1161, 1495, 1911, 2901
BspMAI	CTGCAG	1 cut(s)	1525
BspPI	GGATC	3 cut(s)	1769, 2332, 3053
BspQI	GCTCTTC	1 cut(s)	2924
BspT104I	TTCGAA	1 cut(s)	1859
BspT107I	GGYRCC	3 cut(s)	239, 1123, 1493
BspTNI	GGTCTC	2 cut(s)	420, 2207
BsrBI	CCGCTC	1 cut(s)	2616
BsrDI	GCAATG	3 cut(s)	1287, 2028, 2583
BsrFI	RCCGGY	3 cut(s)	90, 1720, 1756
BssAI	RCCGGY	3 cut(s)	90, 1720, 1756
BssECI	CCNNGG	6 cut(s)	15, 46, 1154, 1340, 2019, 2698
BssHII	GCGCGC	1 cut(s)	73
BssNAI	GTATAC	1 cut(s)	30
BssSI	CACGAG	1 cut(s)	1359
BssT1I	CCWWGG	5 cut(s)	15, 46, 1154, 1340, 2698
Bst1107I	GTATAC	1 cut(s)	30
Bst2BI	CACGAG	1 cut(s)	1359
Bst2UI	CCWGG	2 cut(s)	1347, 1467
Bst4CI	ACNGT	5 cut(s)	1000, 1583, 2016, 2297, 2743
Bst6I	CTCTTC	4 cut(s)	78, 1238, 1923, 2924
BstAPI	GCANNNNNTGC	2 cut(s)	112, 2765
BstBAI	YACGTR	1 cut(s)	1454
BstBI	TTCGAA	1 cut(s)	1859
BstC8I	GCNNGC	3 cut(s)	75, 1758, 1820
BstDSI	CCRYGG	2 cut(s)	15, 1340
BstFNI	CGCG	1 cut(s)	75
BstHHI	GCGC	3 cut(s)	75, 77, 1233
BstMAI	GTCTC	8 cut(s)	300, 420, 495, 1091, 2165, 2207, 2419, 2677
BstNI	CCWGG	2 cut(s)	1347, 1467
BstNSI	RCATGY	2 cut(s)	183, 1812
BstSCI	CCNGG	6 cut(s)	867, 1026, 1345, 1369, 1465, 2019
BstSFI	CTRYAG	2 cut(s)	1521, 2175
BstUI	CGCG	1 cut(s)	75
BstV1I	GCAGC	3 cut(s)	1820, 2340, 2768
BstV2I	GAAGAC	5 cut(s)	60, 1317, 1738, 2637, 2686
BstX2I	RGATCY	1 cut(s)	2324
BstXI	CCANNNNNNTGG	1 cut(s)	2044
BstYI	RGATCY	1 cut(s)	2324
BstZ17I	GTATAC	1 cut(s)	30
BsuI	GTATCC	2 cut(s)	143, 825
BtgI	CCRYGG	2 cut(s)	15, 1340
BtrI	CACGTC	1 cut(s)	1436
BtsI	GCAGTG	1 cut(s)	1530
BtsIMutI	CAGTG	9 cut(s)	117, 251, 263, 963, 1406, 1530, 1788, 2534, 2599
Cac8I	GCNNGC	3 cut(s)	75, 1758, 1820
CciI	TCATGA	2 cut(s)	373, 1648
CfoI	GCGC	3 cut(s)	75, 77, 1233
Cfr10I	RCCGGY	3 cut(s)	90, 1720, 1756
Cfr13I	GGNCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
CseI	GACGC	1 cut(s)	266
Csp6I	GTAC	3 cut(s)	1335, 2487, 3005
CspAI	ACCGGT	1 cut(s)	1720
CviQI	GTAC	3 cut(s)	1335, 2487, 3005
DraIII	CACNNNGTG	1 cut(s)	246
Eam1104I	CTCTTC	4 cut(s)	78, 1238, 1923, 2924
EarI	CTCTTC	4 cut(s)	78, 1238, 1923, 2924
EciI	GGCGGA	1 cut(s)	1767
Ecl136II	GAGCTC	1 cut(s)	2605
Eco130I	CCWWGG	5 cut(s)	15, 46, 1154, 1340, 2698
Eco147I	AGGCCT	4 cut(s)	211, 615, 1701, 2703
Eco24I	GRGCYC	3 cut(s)	1162, 2377, 2607
Eco31I	GGTCTC	2 cut(s)	420, 2207
Eco32I	GATATC	2 cut(s)	1472, 1687
Eco47I	GGWCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
Eco53kI	GAGCTC	1 cut(s)	2605
Eco57I	CTGAAG	5 cut(s)	102, 660, 1319, 1329, 2085
Eco72I	CACGTG	1 cut(s)	1454
Eco88I	CYCGRG	1 cut(s)	679
EcoICRI	GAGCTC	1 cut(s)	2605
EcoRI	GAATTC	1 cut(s)	1259
EcoRII	CCWGG	2 cut(s)	1345, 1465
EcoRV	GATATC	2 cut(s)	1472, 1687
EcoT14I	CCWWGG	5 cut(s)	15, 46, 1154, 1340, 2698
EcoT22I	ATGCAT	1 cut(s)	2271
EcoT38I	GRGCYC	3 cut(s)	1162, 2377, 2607
ErhI	CCWWGG	5 cut(s)	15, 46, 1154, 1340, 2698
Esp3I	CGTCTC	1 cut(s)	300
FalI	AAGNNNNNCTT	6 cut(s)	560, 592, 2299, 2331, 2906, 2938
FaqI	GGGAC	3 cut(s)	653, 1923, 2002
FbaI	TGATCA	3 cut(s)	370, 607, 1363
FblI	GTMKAC	3 cut(s)	29, 2292, 2451
Fnu4HI	GCNGC	3 cut(s)	1834, 2354, 2757
FriOI	GRGCYC	3 cut(s)	1162, 2377, 2607
Fsp4HI	GCNGC	3 cut(s)	1834, 2354, 2757
FspBI	CTAG	5 cut(s)	294, 617, 929, 1091, 1703
GlaI	GCGC	3 cut(s)	74, 76, 1232
GluI	GCNGC	3 cut(s)	1834, 2354, 2757
GsuI	CTGGAG	5 cut(s)	324, 747, 918, 2742, 2880
HapII	CCGG	8 cut(s)	91, 718, 868, 1028, 1371, 1721, 1757, 2021
HgaI	GACGC	1 cut(s)	266
HhaI	GCGC	3 cut(s)	75, 77, 1233
Hin6I	GCGC	3 cut(s)	73, 75, 1231
HinP1I	GCGC	3 cut(s)	73, 75, 1231
HincII	GTYRAC	3 cut(s)	1021, 1033, 2728
HindII	GTYRAC	3 cut(s)	1021, 1033, 2728
HinfI	GANTC	8 cut(s)	361, 377, 727, 1378, 1552, 1711, 2151, 2989
HpaII	CCGG	8 cut(s)	91, 718, 868, 1028, 1371, 1721, 1757, 2021
HphI	GGTGA	4 cut(s)	592, 926, 1333, 2671
Hpy166II	GTNNAC	9 cut(s)	30, 583, 961, 1021, 1033, 2293, 2452, 2728, 3109
Hpy188III	TCNNGA	8 cut(s)	374, 1163, 1361, 1556, 1649, 1925, 1999, 2836
Hpy8I	GTNNAC	9 cut(s)	30, 583, 961, 1021, 1033, 2293, 2452, 2728, 3109
Hpy99I	CGWCG	1 cut(s)	314
HpyCH4III	ACNGT	5 cut(s)	1000, 1583, 2016, 2297, 2743
HpyCH4IV	ACGT	4 cut(s)	510, 1435, 1453, 1462
HpySE526I	ACGT	4 cut(s)	510, 1435, 1453, 1462
HspAI	GCGC	3 cut(s)	73, 75, 1231
KroI	GCCGGC	1 cut(s)	1756
KroNI	GCCGGC	1 cut(s)	1758
Ksp22I	TGATCA	3 cut(s)	370, 607, 1363
LguI	GCTCTTC	1 cut(s)	2924
LmnI	GCTCC	8 cut(s)	937, 973, 1080, 1165, 1228, 1403, 2335, 2613
Lsp1109I	GCAGC	3 cut(s)	1820, 2340, 2768
LweI	GCATC	8 cut(s)	103, 313, 763, 1075, 1314, 1832, 2755, 2860
MaeI	CTAG	5 cut(s)	294, 617, 929, 1091, 1703
MaeII	ACGT	4 cut(s)	510, 1435, 1453, 1462
MaeIII	GTNAC	6 cut(s)	278, 1562, 1811, 1983, 2236, 2743
MbiI	CCGCTC	1 cut(s)	2616
MflI	RGATCY	1 cut(s)	2324
MhlI	GDGCHC	4 cut(s)	1162, 1408, 2377, 2607
MluCI	AATT	7 cut(s)	344, 1259, 1616, 2338, 2415, 3054, 3087
MlyI	GAGTC	2 cut(s)	371, 2983
MmeI	TCCRAC	3 cut(s)	122, 1944, 2201
Mph1103I	ATGCAT	1 cut(s)	2271
MroNI	GCCGGC	1 cut(s)	1756
MroXI	GAANNNNTTC	1 cut(s)	1994
MseI	TTAA	9 cut(s)	357, 486, 758, 1275, 2073, 2091, 2193, 2877, 3093
MslI	CAYNNNNRTG	4 cut(s)	189, 797, 826, 2042
MspA1I	CMGCKG	1 cut(s)	2498
MspI	CCGG	8 cut(s)	91, 718, 868, 1028, 1371, 1721, 1757, 2021
MspR9I	CCNGG	6 cut(s)	869, 1028, 1347, 1371, 1467, 2021
Mva1269I	GAATGC	1 cut(s)	1507
MvaI	CCWGG	2 cut(s)	1347, 1467
MvnI	CGCG	1 cut(s)	75
NaeI	GCCGGC	1 cut(s)	1758
NciI	CCSGG	4 cut(s)	869, 1028, 1371, 2021
NcoI	CCATGG	2 cut(s)	15, 1340
NgoMIV	GCCGGC	1 cut(s)	1756
NlaIV	GGNNCC	8 cut(s)	241, 963, 975, 1125, 1161, 1495, 1911, 2901
NmeAIII	GCCGAG	1 cut(s)	625
NmuCI	GTSAC	5 cut(s)	278, 1562, 1811, 1983, 2743
NsiI	ATGCAT	1 cut(s)	2271
NspI	RCATGY	2 cut(s)	183, 1812
NspV	TTCGAA	1 cut(s)	1859
PaeR7I	CTCGAG	1 cut(s)	679
PagI	TCATGA	2 cut(s)	373, 1648
PauI	GCGCGC	1 cut(s)	73
PceI	AGGCCT	4 cut(s)	211, 615, 1701, 2703
PciI	ACATGT	1 cut(s)	1808
PciSI	GCTCTTC	1 cut(s)	2924
PcsI	WCGNNNNNNNCGW	2 cut(s)	274, 1459
PctI	GAATGC	1 cut(s)	1507
PdiI	GCCGGC	1 cut(s)	1758
PdmI	GAANNNNTTC	1 cut(s)	1994
PfeI	GAWTC	6 cut(s)	361, 727, 1378, 1552, 1711, 2151
PflMI	CCANNNNNTGG	2 cut(s)	1346, 2556
PfoI	TCCNGGA	2 cut(s)	1369, 1465
PinAI	ACCGGT	1 cut(s)	1720
PkrI	GCNGC	3 cut(s)	1835, 2355, 2758
PleI	GAGTC	2 cut(s)	371, 2983
PmaCI	CACGTG	1 cut(s)	1454
PmlI	CACGTG	1 cut(s)	1454
PpsI	GAGTC	2 cut(s)	371, 2983
Ppu21I	YACGTR	1 cut(s)	1454
PscI	ACATGT	1 cut(s)	1808
PshBI	ATTAAT	3 cut(s)	1275, 2073, 2193
PsiI	TTATAA	1 cut(s)	2111
Psp124BI	GAGCTC	1 cut(s)	2607
Psp6I	CCWGG	2 cut(s)	1345, 1465
PspCI	CACGTG	1 cut(s)	1454
PspGI	CCWGG	2 cut(s)	1345, 1465
PspN4I	GGNNCC	8 cut(s)	241, 963, 975, 1125, 1161, 1495, 1911, 2901
PspPI	GGNCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
PspXI	VCTCGAGB	1 cut(s)	679
PstI	CTGCAG	1 cut(s)	1525
PsuI	RGATCY	1 cut(s)	2324
PteI	GCGCGC	1 cut(s)	73
PvuII	CAGCTG	1 cut(s)	2498
RsaI	GTAC	3 cut(s)	1336, 2488, 3006
RsaNI	GTAC	3 cut(s)	1335, 2487, 3005
RseI	CAYNNNNRTG	4 cut(s)	189, 797, 826, 2042
SacI	GAGCTC	1 cut(s)	2607
SapI	GCTCTTC	1 cut(s)	2924
SaqAI	TTAA	9 cut(s)	357, 486, 758, 1275, 2073, 2091, 2193, 2877, 3093
SatI	GCNGC	3 cut(s)	1834, 2354, 2757
Sau96I	GGNCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
SchI	GAGTC	2 cut(s)	371, 2983
ScrFI	CCNGG	6 cut(s)	869, 1028, 1347, 1371, 1467, 2021
SduI	GDGCHC	4 cut(s)	1162, 1408, 2377, 2607
SfaNI	GCATC	8 cut(s)	103, 313, 763, 1075, 1314, 1832, 2755, 2860
SfcI	CTRYAG	2 cut(s)	1521, 2175
Sfr274I	CTCGAG	1 cut(s)	679
SfuI	TTCGAA	1 cut(s)	1859
SinI	GGWCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
SlaI	CTCGAG	1 cut(s)	679
SmiMI	CAYNNNNRTG	4 cut(s)	189, 797, 826, 2042
SmlI	CTYRAG	3 cut(s)	679, 895, 968
SmoI	CTYRAG	3 cut(s)	679, 895, 968
Sse9I	AATT	7 cut(s)	344, 1259, 1616, 2338, 2415, 3054, 3087
SseBI	AGGCCT	4 cut(s)	211, 615, 1701, 2703
SsiI	CCGC	4 cut(s)	700, 886, 1778, 2616
SspI	AATATT	1 cut(s)	1672
SspMI	CTAG	5 cut(s)	294, 617, 929, 1091, 1703
SstI	GAGCTC	1 cut(s)	2607
StuI	AGGCCT	4 cut(s)	211, 615, 1701, 2703
StyD4I	CCNGG	6 cut(s)	867, 1026, 1345, 1369, 1465, 2019
StyI	CCWWGG	5 cut(s)	15, 46, 1154, 1340, 2698
TaaI	ACNGT	5 cut(s)	1000, 1583, 2016, 2297, 2743
TaiI	ACGT	4 cut(s)	513, 1438, 1456, 1465
TaqI	TCGA	4 cut(s)	680, 1513, 1859, 1998
TasI	AATT	7 cut(s)	344, 1259, 1616, 2338, 2415, 3054, 3087
TfiI	GAWTC	6 cut(s)	361, 727, 1378, 1552, 1711, 2151
Tru1I	TTAA	9 cut(s)	357, 486, 758, 1275, 2073, 2091, 2193, 2877, 3093
Tru9I	TTAA	9 cut(s)	357, 486, 758, 1275, 2073, 2091, 2193, 2877, 3093
TscAI	CASTG	9 cut(s)	117, 251, 263, 963, 1413, 1530, 1788, 2541, 2599
TseFI	GTSAC	5 cut(s)	278, 1562, 1811, 1983, 2743
TseI	GCWGC	3 cut(s)	1833, 2353, 2756
Tsp45I	GTSAC	5 cut(s)	278, 1562, 1811, 1983, 2743
TspGWI	ACGGA	2 cut(s)	740, 2892
TspRI	CASTG	9 cut(s)	117, 251, 263, 963, 1413, 1530, 1788, 2541, 2599
Van91I	CCANNNNNTGG	2 cut(s)	1346, 2556
VpaK11BI	GGWCC	6 cut(s)	883, 961, 1718, 1910, 2900, 3083
VspI	ATTAAT	3 cut(s)	1275, 2073, 2193
XapI	RAATTY	2 cut(s)	344, 1259
XceI	RCATGY	2 cut(s)	183, 1812
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1504, 3037
XhoI	CTCGAG	1 cut(s)	679
XmiI	GTMKAC	3 cut(s)	29, 2292, 2451
XmnI	GAANNNNTTC	1 cut(s)	1994
XspI	CTAG	5 cut(s)	294, 617, 929, 1091, 1703
Zsp2I	ATGCAT	1 cut(s)	2271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.