Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0008233

Physical Location & Seq

Genomic Coordinates Forward (+)

17591893 .. 17595520

Gene Structure 3628 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1086500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGAAAGGGAGCCAGAAAGATCAAGAGAAAGTGATTTGGGATCAGATGCGGAGCTCCACAGGGACCCCAATTCCTGGACCCGGCTCCCAATCTCGAGCCACCCCTAAACTCCTCGTCTGGCTCCTCCTCTTCGTCTCTCTCACTTACATCGTGTACACTCTCAAGGTCGTCTCCACCTCACGCGCCGCCTGCTCCGACGACAACGACCCTTTTACCCCTCTCCGCCTCTCCTCCTCCTCCTCCACCGGCAACACCACCACCGCCCAAGATCGGACTTCCCAGATGCTCCAGCTCAAAACCCAACAACCCGATAAAGCAAACCAGCCGACAGAGATAAACGACATCGTTTTCGGCATTGCCGCCTCCGCCAAGCTCTGGAAACAGAGGAAGAACTACATCAAGCTCTGGTACAAGCCCAAGTCGATGCGCGGGATAGTCTGGCTGGACCGCGAAGTAGAGGATAAAAACCCGGAAGGCGTCGGCCTCCCGCCGATTAAAATCTCCGGCGACACCTCCGGGTTCGCCTACACGAACAAACAGGGCCACCGGTCCGCGATTCGGATATCCCGGATCGTGAGCGAAACGCTGCGTCTCGGCCTCAAGGACGTTCGGTGGTTCGTGATGGGAGACGATGACACCGTTTTCATCACCGACAACCTCGTCCGGGTCCTGAGGAAGTACGACCACACGCAGTACTATTATATCGGGAGCTTATCGGAGAGCCACCTGCAGAACATTTTCTTCTCGTACGGCATGGCGTACGGCGGCGGCGGTTTTGCCATCAGCTACCCACTGGCGATGGCGCTGAGCAAAATGCAGGACCGGTGCATTCAGAGGTACCCCGGGCTCTACGGCTCCGACGACCGAATGCATGCGTGCATGGCGGAACTCGGCGTCCCACTCACTAAAGAACTCGGATTTCACCAGTACGATGTGTACGGAAACCTGTTCGGGCTCCTTGCAGCACACCCAGTCGCACCCTTAGTAACGATGCATCACTTGGATGTGGTCGAGCCCATCTTCCCCAATGTGACCCGTATTCAAGCCCTTCAGCTGCTTTTTGCACCAGTGAAGCTGGACTCGGCAGGAATTATGCAACAATCCATCTGCTACGACAAGTCAAAGAGCTGGACCATTTCAGTTTCATGGGGCTTTGCTGTACAAATTTTTCGGGGAGTCTTTTCTCCCCGTGAGATGGAAATGCCATCCCGAACGTTTTTAAATTGGTACAGAAGAGCAGATTACACTGCATATGCATTCAACACCCGTCCTGTTAGCCGAAACGCATGCCAGAAACCTTTTGTCTATTACTTGTCAAAGGTAAGGTTTAATGCTACGACGAATTCAACAATTAGCGAGTATGTCCAGCATCGTACCCCTCATCCCCACTGCAAGTGGAAGATGGCTAATCCTTCTAGTCTAGACAAAGTTGAGGTTCATAAGAAGCCCGACCCGCATCTATGGGATAGATCTCCGAGGCGAAATTGTTGCAGGATCGTGGACTCGAAGAAGAAGGGGACCATGGTGATAGATGTTGGTTTATGTAAAGAGGGTGAGATCAGTGAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF604

Protein Analysis

524

Amino Acids

59.35

Weight (kDa)

9.4

Isoelectric Point (pI)

42.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fringe	PF02434	109 - 309	2.5e-16	Fringe-like
DUF604	PF04646	244 - 497	2.5e-117	Protein of unknown function, DUF604

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11350 AT4G11350 AT4G23490 AT5G41460
fragaria_vesca	FvH4_5g02990 FvH4_5g02990
malus_domestica	MD00G1086500.v1.1 MD06G1088800.v1.1
prunus_persica	Prupe.5G104700_v2.0.a1
pyrus_communis	pycom06g08470 pycom14g10430
rosa_chinensis	RchiOBHm_Chr7g0196881 RchiOBHm_Chr7g0196891
rosa_laevigata	RLG00000003981
rosa_multiflora	Rmu_co8224972.1_g000001 Rmu_co8340915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258880
rosa_rugosa	Rorug07G0036400
rosa_samantha	Rh7AG160900 Rh7BG163100 Rh7CG169200 Rh7DG162500
rosa_wichuraiana	Rw7G014070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	735
AasI	GACNNNNNNGTC	1 cut(s)	659
Acc36I	ACCTGC	1 cut(s)	735
Acc65I	GGTACC	1 cut(s)	837
AccB1I	GGYRCC	1 cut(s)	837
AccB7I	CCANNNNNTGG	2 cut(s)	74, 375
AccII	CGCG	4 cut(s)	183, 429, 450, 554
AclI	AACGTT	1 cut(s)	1214
AclWI	GGATC	3 cut(s)	48, 578, 1502
AcsI	RAATTY	3 cut(s)	1164, 1342, 1566
AcuI	CTGAAG	1 cut(s)	1034
AcyI	GRCGYC	2 cut(s)	477, 894
AfiI	CCNNNNNNNGG	7 cut(s)	74, 80, 270, 375, 558, 664, 1195
AgeI	ACCGGT	2 cut(s)	546, 822
AgsI	TTSAA	3 cut(s)	1043, 1261, 1347
AjnI	CCWGG	1 cut(s)	73
AloI	GAACNNNNNNTCC	2 cut(s)	879, 911
AluBI	AGCT	9 cut(s)	54, 292, 373, 403, 711, 786, 1054, 1075, 1128
AluI	AGCT	9 cut(s)	54, 292, 373, 403, 711, 786, 1054, 1075, 1128
Alw21I	GWGCWC	1 cut(s)	56
Alw26I	GTCTC	4 cut(s)	139, 175, 596, 621
AlwI	GGATC	3 cut(s)	48, 578, 1502
Ama87I	CYCGRG	2 cut(s)	93, 842
AoxI	GGCC	3 cut(s)	481, 541, 595
ApeKI	GCWGC	3 cut(s)	586, 962, 1054
ApoI	RAATTY	3 cut(s)	1164, 1342, 1566
ArsI	GACNNNNNNTTYG	2 cut(s)	332, 364
AsiGI	ACCGGT	2 cut(s)	546, 822
Asp700I	GAANNNNTTC	1 cut(s)	737
Asp718I	GGTACC	1 cut(s)	837
AspLEI	GCGC	3 cut(s)	185, 429, 805
AspS9I	GGNCC	9 cut(s)	63, 77, 445, 541, 549, 667, 820, 1131, 1518
AsuC2I	CCSGG	7 cut(s)	81, 470, 517, 568, 665, 843, 844
AsuHPI	GGTGA	4 cut(s)	640, 914, 1537, 1565
AvaI	CYCGRG	2 cut(s)	93, 842
AvaII	GGWCC	8 cut(s)	63, 77, 445, 549, 667, 820, 1131, 1518
AxyI	CCTNAGG	1 cut(s)	671
BanI	GGYRCC	1 cut(s)	837
BanII	GRGCYC	4 cut(s)	56, 849, 957, 1017
Bbv12I	GWGCWC	1 cut(s)	56
BbvI	GCAGC	3 cut(s)	573, 974, 1041
BccI	CCATC	8 cut(s)	616, 788, 793, 1025, 1112, 1189, 1213, 1396
BceAI	ACGGC	3 cut(s)	766, 778, 868
BcgI	CGANNNNNNTGC	4 cut(s)	1269, 1303, 1470, 1504
BciT130I	CCWGG	1 cut(s)	75
BcnI	CCSGG	7 cut(s)	81, 470, 517, 568, 665, 843, 844
BcoDI	GTCTC	4 cut(s)	139, 175, 596, 621
BfaI	CTAG	2 cut(s)	1416, 1421
BfmI	CTRYAG	1 cut(s)	728
BfoI	RGCGCY	1 cut(s)	806
BfuAI	ACCTGC	1 cut(s)	735
BglII	AGATCT	1 cut(s)	1469
BisI	GCNGC	7 cut(s)	186, 360, 587, 766, 769, 963, 1055
BlpI	GCTNAGC	1 cut(s)	806
BlsI	GCNGC	7 cut(s)	187, 361, 588, 767, 770, 964, 1056
BmcAI	AGTACT	1 cut(s)	695
Bme1390I	CCNGG	8 cut(s)	75, 81, 470, 517, 568, 665, 843, 844
Bme18I	GGWCC	8 cut(s)	63, 77, 445, 549, 667, 820, 1131, 1518
BmeT110I	CYCGRG	2 cut(s)	93, 842
BmgT120I	GGNCC	9 cut(s)	63, 77, 445, 541, 549, 667, 820, 1131, 1518
BmrFI	CCNGG	8 cut(s)	75, 81, 470, 517, 568, 665, 843, 844
BmrI	ACTGGG	1 cut(s)	965
BmsI	GCATC	7 cut(s)	36, 273, 414, 981, 1003, 1378, 1465
BmuI	ACTGGG	1 cut(s)	965
BpmI	CTGGAG	1 cut(s)	272
Bpu1102I	GCTNAGC	1 cut(s)	806
BpuEI	CTTGAG	2 cut(s)	146, 584
BpuMI	CCSGG	7 cut(s)	81, 470, 517, 568, 665, 843, 844
BsaBI	GATNNNNATC	1 cut(s)	497
BsaHI	GRCGYC	2 cut(s)	477, 894
BsaJI	CCNNGG	4 cut(s)	841, 842, 1475, 1521
BsaWI	WCCGGW	2 cut(s)	546, 822
Bsc4I	CCNNNNNNNGG	7 cut(s)	74, 80, 270, 375, 558, 664, 1195
Bse118I	RCCGGY	3 cut(s)	245, 546, 822
Bse1I	ACTGG	4 cut(s)	798, 925, 971, 1067
Bse21I	CCTNAGG	1 cut(s)	671
Bse3DI	GCAATG	1 cut(s)	354
Bse8I	GATNNNNATC	1 cut(s)	497
BseBI	CCWGG	1 cut(s)	75
BseDI	CCNNGG	4 cut(s)	841, 842, 1475, 1521
BseGI	GGATG	3 cut(s)	1009, 1205, 1381
BseJI	GATNNNNATC	1 cut(s)	497
BseLI	CCNNNNNNNGG	7 cut(s)	74, 80, 270, 375, 558, 664, 1195
BseMI	GCAATG	1 cut(s)	354
BseMII	CTCAG	2 cut(s)	662, 797
BseNI	ACTGG	4 cut(s)	798, 925, 971, 1067
BseRI	GAGGAG	7 cut(s)	101, 113, 116, 220, 223, 226, 229
BseXI	GCAGC	3 cut(s)	573, 974, 1041
Bsh1236I	CGCG	4 cut(s)	183, 429, 450, 554
Bsh1285I	CGRYCG	1 cut(s)	865
BshFI	GGCC	3 cut(s)	483, 543, 597
BshNI	GGYRCC	1 cut(s)	837
BshTI	ACCGGT	2 cut(s)	546, 822
BsiEI	CGRYCG	1 cut(s)	865
BsiHKAI	GWGCWC	1 cut(s)	56
BsiHKCI	CYCGRG	2 cut(s)	93, 842
BsiWI	CGTACG	2 cut(s)	747, 759
BslFI	GGGAC	3 cut(s)	76, 881, 1531
BslI	CCNNNNNNNGG	7 cut(s)	74, 80, 270, 375, 558, 664, 1195
BsmAI	GTCTC	4 cut(s)	139, 175, 596, 621
BsmBI	CGTCTC	4 cut(s)	139, 175, 596, 621
BsmFI	GGGAC	3 cut(s)	76, 881, 1531
BsmI	GAATGC	3 cut(s)	828, 873, 1256
BsnI	GGCC	3 cut(s)	483, 543, 597
BsoBI	CYCGRG	2 cut(s)	93, 842
Bsp1286I	GDGCHC	4 cut(s)	56, 849, 957, 1017
Bsp1407I	TGTACA	2 cut(s)	153, 1159
Bsp143I	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
Bsp1720I	GCTNAGC	1 cut(s)	806
Bsp19I	CCATGG	1 cut(s)	1521
BspANI	GGCC	3 cut(s)	483, 543, 597
BspCNI	CTCAG	2 cut(s)	663, 798
BspFNI	CGCG	4 cut(s)	183, 429, 450, 554
BspMAI	CTGCAG	1 cut(s)	732
BspMI	ACCTGC	1 cut(s)	735
BspPI	GGATC	3 cut(s)	48, 578, 1502
BspQI	GCTCTTC	1 cut(s)	1228
BspT107I	GGYRCC	1 cut(s)	837
BsrDI	GCAATG	1 cut(s)	354
BsrFI	RCCGGY	3 cut(s)	245, 546, 822
BsrGI	TGTACA	2 cut(s)	153, 1159
BsrI	ACTGG	4 cut(s)	798, 925, 971, 1067
BssAI	RCCGGY	3 cut(s)	245, 546, 822
BssECI	CCNNGG	4 cut(s)	841, 842, 1475, 1521
BssMI	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
BssNI	GRCGYC	2 cut(s)	477, 894
BssT1I	CCWWGG	1 cut(s)	1521
Bst2UI	CCWGG	1 cut(s)	75
Bst4CI	ACNGT	1 cut(s)	640
Bst6I	CTCTTC	2 cut(s)	134, 1228
BstACI	GRCGYC	2 cut(s)	477, 894
BstAUI	TGTACA	2 cut(s)	153, 1159
BstC8I	GCNNGC	4 cut(s)	190, 873, 877, 1288
BstDEI	CTNAG	3 cut(s)	671, 806, 982
BstDSI	CCRYGG	1 cut(s)	1521
BstF5I	GGATG	3 cut(s)	1009, 1205, 1381
BstFNI	CGCG	4 cut(s)	183, 429, 450, 554
BstH2I	RGCGCY	1 cut(s)	806
BstHHI	GCGC	3 cut(s)	185, 429, 805
BstKTI	GATC	7 cut(s)	22, 43, 271, 573, 1472, 1497, 1560
BstMAI	GTCTC	4 cut(s)	139, 175, 596, 621
BstMBI	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
BstMCI	CGRYCG	1 cut(s)	865
BstMWI	GCNNNNNNNGC	4 cut(s)	189, 365, 881, 1453
BstNI	CCWGG	1 cut(s)	75
BstNSI	RCATGY	2 cut(s)	875, 1290
BstSCI	CCNGG	8 cut(s)	73, 79, 468, 515, 566, 663, 841, 842
BstSFI	CTRYAG	1 cut(s)	728
BstUI	CGCG	4 cut(s)	183, 429, 450, 554
BstV1I	GCAGC	3 cut(s)	573, 974, 1041
BstX2I	RGATCY	1 cut(s)	1469
BstYI	RGATCY	1 cut(s)	1469
Bsu36I	CCTNAGG	1 cut(s)	671
BsuRI	GGCC	3 cut(s)	483, 543, 597
BtgI	CCRYGG	1 cut(s)	1521
BtgZI	GCGATG	1 cut(s)	812
BtsCI	GGATG	3 cut(s)	1009, 1205, 1381
BtsI	GCAGTG	2 cut(s)	1245, 1387
BtsIMutI	CAGTG	5 cut(s)	791, 1074, 1245, 1387, 1567
BveI	ACCTGC	1 cut(s)	735
Cac8I	GCNNGC	4 cut(s)	190, 873, 877, 1288
CfoI	GCGC	3 cut(s)	185, 429, 805
Cfr10I	RCCGGY	3 cut(s)	245, 546, 822
Cfr13I	GGNCC	9 cut(s)	63, 77, 445, 541, 549, 667, 820, 1131, 1518
Cfr9I	CCCGGG	1 cut(s)	842
CpoI	CGGWCCG	1 cut(s)	549
CseI	GACGC	3 cut(s)	466, 578, 883
CspAI	ACCGGT	2 cut(s)	546, 822
CspI	CGGWCCG	1 cut(s)	549
CviAII	CATG	6 cut(s)	754, 872, 880, 1146, 1287, 1522
DdeI	CTNAG	3 cut(s)	671, 806, 982
DpnI	GATC	7 cut(s)	21, 42, 270, 572, 1471, 1496, 1559
DpnII	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
DraI	TTTAAA	1 cut(s)	1221
DrdI	GACNNNNNNGTC	1 cut(s)	659
DseDI	GACNNNNNNGTC	1 cut(s)	659
Eam1104I	CTCTTC	2 cut(s)	134, 1228
EarI	CTCTTC	2 cut(s)	134, 1228
EciI	GGCGGA	3 cut(s)	212, 355, 899
Ecl136II	GAGCTC	1 cut(s)	54
Eco130I	CCWWGG	1 cut(s)	1521
Eco24I	GRGCYC	4 cut(s)	56, 849, 957, 1017
Eco32I	GATATC	1 cut(s)	564
Eco47I	GGWCC	8 cut(s)	63, 77, 445, 549, 667, 820, 1131, 1518
Eco53kI	GAGCTC	1 cut(s)	54
Eco57I	CTGAAG	1 cut(s)	1034
Eco81I	CCTNAGG	1 cut(s)	671
Eco88I	CYCGRG	2 cut(s)	93, 842
EcoICRI	GAGCTC	1 cut(s)	54
EcoO109I	RGGNCCY	2 cut(s)	63, 667
EcoRI	GAATTC	1 cut(s)	1342
EcoRII	CCWGG	1 cut(s)	73
EcoRV	GATATC	1 cut(s)	564
EcoT14I	CCWWGG	1 cut(s)	1521
EcoT22I	ATGCAT	3 cut(s)	873, 996, 1258
EcoT38I	GRGCYC	4 cut(s)	56, 849, 957, 1017
ErhI	CCWWGG	1 cut(s)	1521
Esp3I	CGTCTC	4 cut(s)	139, 175, 596, 621
FaeI	CATG	6 cut(s)	757, 875, 883, 1149, 1290, 1525
FaqI	GGGAC	3 cut(s)	76, 881, 1531
FatI	CATG	6 cut(s)	753, 871, 879, 1145, 1286, 1521
FauI	CCCGC	3 cut(s)	422, 495, 1461
FauNDI	CATATG	1 cut(s)	1252
Fnu4HI	GCNGC	7 cut(s)	186, 360, 587, 766, 769, 963, 1055
FokI	GGATG	3 cut(s)	1016, 1192, 1368
FriOI	GRGCYC	4 cut(s)	56, 849, 957, 1017
Fsp4HI	GCNGC	7 cut(s)	186, 360, 587, 766, 769, 963, 1055
FspBI	CTAG	2 cut(s)	1416, 1421
GlaI	GCGC	3 cut(s)	184, 428, 804
GluI	GCNGC	7 cut(s)	186, 360, 587, 766, 769, 963, 1055
GsuI	CTGGAG	1 cut(s)	272
HaeII	RGCGCY	1 cut(s)	806
HaeIII	GGCC	3 cut(s)	483, 543, 597
HgaI	GACGC	3 cut(s)	466, 578, 883
HhaI	GCGC	3 cut(s)	185, 429, 805
Hin1I	GRCGYC	2 cut(s)	477, 894
Hin1II	CATG	6 cut(s)	757, 875, 883, 1149, 1290, 1525
Hin6I	GCGC	3 cut(s)	183, 427, 803
HinP1I	GCGC	3 cut(s)	183, 427, 803
HinfI	GANTC	4 cut(s)	556, 1079, 1176, 1502
HphI	GGTGA	4 cut(s)	640, 914, 1537, 1565
Hpy166II	GTNNAC	4 cut(s)	154, 156, 937, 1501
Hpy188I	TCNGA	9 cut(s)	45, 196, 273, 561, 718, 834, 859, 917, 1476
Hpy188III	TCNNGA	9 cut(s)	23, 93, 376, 574, 619, 670, 706, 1209, 1421
Hpy8I	GTNNAC	4 cut(s)	154, 156, 937, 1501
Hpy99I	CGWCG	4 cut(s)	200, 482, 863, 1342
HpyAV	CCTTC	4 cut(s)	467, 1058, 1422, 1507
HpyCH4III	ACNGT	1 cut(s)	640
HpyCH4IV	ACGT	2 cut(s)	606, 1214
HpyF10VI	GCNNNNNNNGC	4 cut(s)	189, 365, 881, 1453
HpyF3I	CTNAG	3 cut(s)	671, 806, 982
HpySE526I	ACGT	2 cut(s)	606, 1214
Hsp92I	GRCGYC	2 cut(s)	477, 894
Hsp92II	CATG	6 cut(s)	757, 875, 883, 1149, 1290, 1525
HspAI	GCGC	3 cut(s)	183, 427, 803
KflI	GGGWCCC	1 cut(s)	63
KpnI	GGTACC	1 cut(s)	841
Kzo9I	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
LguI	GCTCTTC	1 cut(s)	1228
Lsp1109I	GCAGC	3 cut(s)	573, 974, 1041
LweI	GCATC	7 cut(s)	36, 273, 414, 981, 1003, 1378, 1465
MaeI	CTAG	2 cut(s)	1416, 1421
MaeII	ACGT	2 cut(s)	606, 1214
MaeIII	GTNAC	2 cut(s)	985, 1030
MalI	GATC	7 cut(s)	21, 42, 270, 572, 1471, 1496, 1559
MboI	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
MboII	GAAGA	8 cut(s)	121, 400, 733, 1012, 1245, 1411, 1519, 1522
MflI	RGATCY	1 cut(s)	1469
MhlI	GDGCHC	4 cut(s)	56, 849, 957, 1017
MluCI	AATT	8 cut(s)	69, 1089, 1164, 1222, 1342, 1350, 1483, 1566
MlyI	GAGTC	3 cut(s)	1073, 1185, 1496
MmeI	TCCRAC	2 cut(s)	219, 882
Mph1103I	ATGCAT	3 cut(s)	873, 996, 1258
MroXI	GAANNNNTTC	1 cut(s)	737
MseI	TTAA	4 cut(s)	495, 1220, 1329, 1570
MslI	CAYNNNNRTG	1 cut(s)	1002
MspA1I	CMGCKG	1 cut(s)	1054
MspR9I	CCNGG	8 cut(s)	75, 81, 470, 517, 568, 665, 843, 844
Mva1269I	GAATGC	3 cut(s)	828, 873, 1256
MvaI	CCWGG	1 cut(s)	75
MvnI	CGCG	4 cut(s)	183, 429, 450, 554
MwoI	GCNNNNNNNGC	4 cut(s)	189, 365, 881, 1453
NciI	CCSGG	7 cut(s)	81, 470, 517, 568, 665, 843, 844
NcoI	CCATGG	1 cut(s)	1521
NdeI	CATATG	1 cut(s)	1252
NdeII	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
NlaIII	CATG	6 cut(s)	757, 875, 883, 1149, 1290, 1525
NmeAIII	GCCGAG	3 cut(s)	573, 870, 1061
NmuCI	GTSAC	1 cut(s)	1030
NsiI	ATGCAT	3 cut(s)	873, 996, 1258
NspI	RCATGY	2 cut(s)	875, 1290
PaeI	GCATGC	2 cut(s)	875, 1290
PaeR7I	CTCGAG	1 cut(s)	93
PaqCI	CACCTGC	1 cut(s)	735
PciSI	GCTCTTC	1 cut(s)	1228
PcsI	WCGNNNNNNNCGW	2 cut(s)	636, 858
PctI	GAATGC	3 cut(s)	828, 873, 1256
PdmI	GAANNNNTTC	1 cut(s)	737
PfeI	GAWTC	1 cut(s)	556
Pfl23II	CGTACG	2 cut(s)	747, 759
PflMI	CCANNNNNTGG	2 cut(s)	74, 375
PfoI	TCCNGGA	2 cut(s)	73, 566
PinAI	ACCGGT	2 cut(s)	546, 822
PkrI	GCNGC	7 cut(s)	187, 361, 588, 767, 770, 964, 1056
PleI	GAGTC	3 cut(s)	1073, 1184, 1496
PpsI	GAGTC	3 cut(s)	1073, 1184, 1496
PpuMI	RGGWCCY	2 cut(s)	63, 667
Psp124BI	GAGCTC	1 cut(s)	56
Psp1406I	AACGTT	1 cut(s)	1214
Psp5II	RGGWCCY	2 cut(s)	63, 667
Psp6I	CCWGG	1 cut(s)	73
PspGI	CCWGG	1 cut(s)	73
PspLI	CGTACG	2 cut(s)	747, 759
PspPI	GGNCC	9 cut(s)	63, 77, 445, 541, 549, 667, 820, 1131, 1518
PspPPI	RGGWCCY	2 cut(s)	63, 667
PstI	CTGCAG	1 cut(s)	732
PsuI	RGATCY	1 cut(s)	1469
PvuII	CAGCTG	1 cut(s)	1054
RseI	CAYNNNNRTG	1 cut(s)	1002
Rsr2I	CGGWCCG	1 cut(s)	549
RsrII	CGGWCCG	1 cut(s)	549
SacI	GAGCTC	1 cut(s)	56
SapI	GCTCTTC	1 cut(s)	1228
SaqAI	TTAA	4 cut(s)	495, 1220, 1329, 1570
SatI	GCNGC	7 cut(s)	186, 360, 587, 766, 769, 963, 1055
Sau3AI	GATC	7 cut(s)	19, 40, 268, 570, 1469, 1494, 1557
Sau96I	GGNCC	9 cut(s)	63, 77, 445, 541, 549, 667, 820, 1131, 1518
ScaI	AGTACT	1 cut(s)	695
SchI	GAGTC	3 cut(s)	1073, 1185, 1496
ScrFI	CCNGG	8 cut(s)	75, 81, 470, 517, 568, 665, 843, 844
SduI	GDGCHC	4 cut(s)	56, 849, 957, 1017
SfaNI	GCATC	7 cut(s)	36, 273, 414, 981, 1003, 1378, 1465
SfcI	CTRYAG	1 cut(s)	728
Sfr274I	CTCGAG	1 cut(s)	93
SinI	GGWCC	8 cut(s)	63, 77, 445, 549, 667, 820, 1131, 1518
SlaI	CTCGAG	1 cut(s)	93
SmaI	CCCGGG	1 cut(s)	844
SmiMI	CAYNNNNRTG	1 cut(s)	1002
SmlI	CTYRAG	3 cut(s)	93, 161, 599
SmoI	CTYRAG	3 cut(s)	93, 161, 599
SphI	GCATGC	2 cut(s)	875, 1290
Sse9I	AATT	8 cut(s)	69, 1089, 1164, 1222, 1342, 1350, 1483, 1566
SspMI	CTAG	2 cut(s)	1416, 1421
SstI	GAGCTC	1 cut(s)	56
StyD4I	CCNGG	8 cut(s)	73, 79, 468, 515, 566, 663, 841, 842
StyI	CCWWGG	1 cut(s)	1521
TaaI	ACNGT	1 cut(s)	640
TaiI	ACGT	2 cut(s)	609, 1217
TaqI	TCGA	4 cut(s)	94, 422, 1011, 1505
TaqII	GACCGA	1 cut(s)	879
TasI	AATT	8 cut(s)	69, 1089, 1164, 1222, 1342, 1350, 1483, 1566
TatI	WGTACW	3 cut(s)	153, 693, 1159
TauI	GCSGC	4 cut(s)	188, 362, 768, 771
TfiI	GAWTC	1 cut(s)	556
Tru1I	TTAA	4 cut(s)	495, 1220, 1329, 1570
Tru9I	TTAA	4 cut(s)	495, 1220, 1329, 1570
TscAI	CASTG	5 cut(s)	798, 1074, 1252, 1394, 1567
TseFI	GTSAC	1 cut(s)	1030
TseI	GCWGC	3 cut(s)	586, 962, 1054
Tsp45I	GTSAC	1 cut(s)	1030
TspDTI	ATGAA	4 cut(s)	17, 634, 1134, 1427
TspGWI	ACGGA	1 cut(s)	954
TspMI	CCCGGG	1 cut(s)	842
TspRI	CASTG	5 cut(s)	798, 1074, 1252, 1394, 1567
Van91I	CCANNNNNTGG	2 cut(s)	74, 375
VpaK11BI	GGWCC	8 cut(s)	63, 77, 445, 549, 667, 820, 1131, 1518
XapI	RAATTY	3 cut(s)	1164, 1342, 1566
XbaI	TCTAGA	1 cut(s)	1420
XceI	RCATGY	2 cut(s)	875, 1290
XhoI	CTCGAG	1 cut(s)	93
XmaI	CCCGGG	1 cut(s)	842
XmnI	GAANNNNTTC	1 cut(s)	737
XspI	CTAG	2 cut(s)	1416, 1421
ZrmI	AGTACT	1 cut(s)	695
Zsp2I	ATGCAT	3 cut(s)	873, 996, 1258

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.