Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0008233

Physical Location & Seq

Genomic Coordinates Reverse (-)

21653709 .. 21657819

Gene Structure 4111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1088800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGAAAGCGAGCCAGAAAGATCAAGAGAAAGTGATTTGGGATCAGATGCGGAGCTCCACAGGGACCCCGATTCCTGGACCCGGCTCCCAATCTAGAGCCACCCCTAAACTCCTCGTCTGGCTCATCCTCTTCGTCTCTCTCACTTACATCGTCTACACTCTCAAGCTCGTCTCCACCTCACGCGCCGCCTGCTCAGACGACAGCGACCCCTTCAACCCTCTCCGCATCTCCTCCTCCTCCTCCTCTTCCGCCAACACCACCACCGCCCAAGATCGGACTTCCCAAATTCTCCAGCTCAAAACCCAAAAACCCGATAAAGCAAACCAGCCGACGGAGATAAACGACATCGTTTTCGGCATTGCCGCCTCCGCCAAGCTCTGGGAACAGAGGAAGAACTACATCAAGCTCTGGTACAAGCCCAAGTCGATGCGCGGGATAGTCTGGCTGGACCGCGAAGTTGAGGATAAAAACCCGGAAGGCGGCGGTCTCCCGCCGATTAAAATCTCCGGCGACACCTCCGGGTTCACCTACACCAACAAACAGGGCCACCGGTCCGCGATTCGGATATCCCGGATCGTGAGCGAAACGCTGCGTCTTGGCCTCAAGGACGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCATCACCGACAACCTCGTCCGGGTCCTGAGGAAGTACGACCACACGCAGTACTATTATATCGGGAGCTTATCAGAAAGCCACCTGCAGAACATTTTCTTCTCGTATGGCATGGCGTACGGCGGCGGCGGCTTCGCCATCAGCTACCCGCTGGCGCTGGCGCTGAGCAAAATGCAGGACCGGTGCATTCAGAGGTACCCAGGACTCTACGGCTCCGACGACCGAATGCAGGCGTGCATGGCGGAACTCGGCGTCCCACTCACTAAAGAACTCGGATTTCACCAGTATGATGTGTACGGAAACCTGTTCGGGCTCCTTGCAGCACACCCAGTGGCACCCTTAGTGACAATGCATCACCTGGATGTGGTTGAGCCCATCTTCCCCAATGTGACCCGTATTCAAGCCCTTCAGCGGCTTTTTATACCAGTGAAGCTGGACTCAGCAGGAATCATACAACAATCCATCTGCTACGACAAATCAAAGAGCTGGACCATTTCAGTTTCATGGGGCTTTGCTGTTCAAATTTTTCGGGGAGTCTTTTCACCCCGCGAGATGGAAATGCCTTCCCGGACGTTTTTGAATTGGTACAGAAGGGCAGATTACACAGCATATGCATTCAACACTCGTCCAGTCAGCCGAAACCCATGCCAGAAGCCTTTTGTCTATTACTTGTCAAAGGTAAGGTTTAATGCGACAACGAATTCAACAATCAGCGAGTATGTCCAGCATCGTACCCCTCATCCCCACTGCAAGTGGAAGATGGCTAATCCTTCCAATCTTGACAAAGTCGAGGTTCATAAGAAGCCTGACCCGCACCTATGGGATAGATCTCCGAGGCGAAATTGTTGCAGGATCATGGAGTCGAAGAAGAAGGGGACCATGGTGATAAATGTTGGTTTATGTAAAGAGGGTGAGATCAGTGAAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF604

Protein Analysis

525

Amino Acids

59.56

Weight (kDa)

9.44

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fringe	PF02434	110 - 310	3.5e-17	Fringe-like
DUF604	PF04646	245 - 498	2.3e-117	Protein of unknown function, DUF604

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11350 AT4G11350 AT4G23490 AT5G41460
fragaria_vesca	FvH4_5g02990 FvH4_5g02990
malus_domestica	MD00G1086500.v1.1 MD06G1088800.v1.1
prunus_persica	Prupe.5G104700_v2.0.a1
pyrus_communis	pycom06g08470 pycom14g10430
rosa_chinensis	RchiOBHm_Chr7g0196881 RchiOBHm_Chr7g0196891
rosa_laevigata	RLG00000003981
rosa_multiflora	Rmu_co8224972.1_g000001 Rmu_co8340915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258880
rosa_rugosa	Rorug07G0036400
rosa_samantha	Rh7AG160900 Rh7BG163100 Rh7CG169200 Rh7DG162500
rosa_wichuraiana	Rw7G014070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	738
AasI	GACNNNNNNGTC	1 cut(s)	662
Acc36I	ACCTGC	1 cut(s)	738
Acc65I	GGTACC	1 cut(s)	840
AccB1I	GGYRCC	2 cut(s)	840, 979
AccB7I	CCANNNNNTGG	1 cut(s)	378
AccI	GTMKAC	1 cut(s)	153
AccII	CGCG	5 cut(s)	183, 432, 453, 557, 1194
AclWI	GGATC	3 cut(s)	48, 581, 1505
AcsI	RAATTY	3 cut(s)	285, 1167, 1345
AcuI	CTGAAG	1 cut(s)	1037
AcyI	GRCGYC	1 cut(s)	897
AdeI	CACNNNGTG	1 cut(s)	976
AfaI	GTAC	8 cut(s)	413, 683, 698, 764, 842, 941, 1232, 1378
AgeI	ACCGGT	2 cut(s)	549, 825
AgsI	TTSAA	6 cut(s)	214, 1046, 1166, 1225, 1264, 1350
AjiI	CACGTC	1 cut(s)	610
AjnI	CCWGG	3 cut(s)	73, 844, 1002
AloI	GAACNNNNNNTCC	2 cut(s)	882, 914
AluBI	AGCT	9 cut(s)	54, 166, 295, 376, 406, 714, 789, 1078, 1131
AluI	AGCT	9 cut(s)	54, 166, 295, 376, 406, 714, 789, 1078, 1131
Alw21I	GWGCWC	1 cut(s)	56
Alw26I	GTCTC	3 cut(s)	139, 175, 491
AlwI	GGATC	3 cut(s)	48, 581, 1505
AoxI	GGCC	2 cut(s)	544, 598
ApeKI	GCWGC	2 cut(s)	589, 965
ApoI	RAATTY	3 cut(s)	285, 1167, 1345
ArsI	GACNNNNNNTTYG	2 cut(s)	335, 367
AsiGI	ACCGGT	2 cut(s)	549, 825
Asp700I	GAANNNNTTC	1 cut(s)	740
Asp718I	GGTACC	1 cut(s)	840
AspLEI	GCGC	4 cut(s)	185, 432, 802, 808
AspS9I	GGNCC	9 cut(s)	63, 77, 448, 544, 552, 670, 823, 1134, 1521
AsuC2I	CCSGG	6 cut(s)	81, 473, 520, 571, 668, 1213
AsuHPI	GGTGA	7 cut(s)	517, 643, 917, 992, 1179, 1540, 1568
AvaII	GGWCC	8 cut(s)	63, 77, 448, 552, 670, 823, 1134, 1521
AxyI	CCTNAGG	1 cut(s)	674
BanI	GGYRCC	2 cut(s)	840, 979
BanII	GRGCYC	3 cut(s)	56, 960, 1020
Bbv12I	GWGCWC	1 cut(s)	56
BbvI	GCAGC	2 cut(s)	576, 977
BccI	CCATC	6 cut(s)	619, 791, 1028, 1115, 1192, 1399
BceAI	ACGGC	2 cut(s)	781, 871
BcgI	CGANNNNNNTGC	4 cut(s)	1272, 1306, 1473, 1507
BciT130I	CCWGG	3 cut(s)	75, 846, 1004
BcnI	CCSGG	6 cut(s)	81, 473, 520, 571, 668, 1213
BcoDI	GTCTC	3 cut(s)	139, 175, 491
BfaI	CTAG	1 cut(s)	93
BfmI	CTRYAG	1 cut(s)	731
BfoI	RGCGCY	2 cut(s)	803, 809
BfuAI	ACCTGC	1 cut(s)	738
BglII	AGATCT	1 cut(s)	1472
BisI	GCNGC	9 cut(s)	186, 363, 481, 590, 769, 772, 775, 966, 1058
BlpI	GCTNAGC	1 cut(s)	809
BlsI	GCNGC	9 cut(s)	187, 364, 482, 591, 770, 773, 776, 967, 1059
BmcAI	AGTACT	1 cut(s)	698
Bme1390I	CCNGG	9 cut(s)	75, 81, 473, 520, 571, 668, 846, 1004, 1213
Bme18I	GGWCC	8 cut(s)	63, 77, 448, 552, 670, 823, 1134, 1521
BmgBI	CACGTC	1 cut(s)	610
BmgT120I	GGNCC	9 cut(s)	63, 77, 448, 544, 552, 670, 823, 1134, 1521
BmrFI	CCNGG	9 cut(s)	75, 81, 473, 520, 571, 668, 846, 1004, 1213
BmrI	ACTGGG	1 cut(s)	968
BmsI	GCATC	5 cut(s)	36, 234, 417, 1006, 1381
BmuI	ACTGGG	1 cut(s)	968
BpmI	CTGGAG	1 cut(s)	275
Bpu1102I	GCTNAGC	1 cut(s)	809
BpuEI	CTTGAG	2 cut(s)	146, 587
BpuMI	CCSGG	6 cut(s)	81, 473, 520, 571, 668, 1213
BsaBI	GATNNNNATC	1 cut(s)	500
BsaHI	GRCGYC	1 cut(s)	897
BsaI	GGTCTC	1 cut(s)	491
BsaJI	CCNNGG	3 cut(s)	844, 1478, 1524
BsaWI	WCCGGW	2 cut(s)	549, 825
Bse118I	RCCGGY	2 cut(s)	549, 825
Bse1I	ACTGG	4 cut(s)	928, 974, 1070, 1274
Bse21I	CCTNAGG	1 cut(s)	674
Bse3DI	GCAATG	1 cut(s)	357
Bse8I	GATNNNNATC	1 cut(s)	500
BseBI	CCWGG	3 cut(s)	75, 846, 1004
BseDI	CCNNGG	3 cut(s)	844, 1478, 1524
BseGI	GGATG	3 cut(s)	123, 1012, 1384
BseJI	GATNNNNATC	1 cut(s)	500
BseMI	GCAATG	1 cut(s)	357
BseMII	CTCAG	4 cut(s)	207, 665, 800, 1098
BseNI	ACTGG	4 cut(s)	928, 974, 1070, 1274
BseRI	GAGGAG	6 cut(s)	101, 220, 223, 226, 229, 232
BseXI	GCAGC	2 cut(s)	576, 977
Bsh1236I	CGCG	5 cut(s)	183, 432, 453, 557, 1194
Bsh1285I	CGRYCG	1 cut(s)	868
BshFI	GGCC	2 cut(s)	546, 600
BshNI	GGYRCC	2 cut(s)	840, 979
BshTI	ACCGGT	2 cut(s)	549, 825
BsiEI	CGRYCG	1 cut(s)	868
BsiHKAI	GWGCWC	1 cut(s)	56
BsiSI	CCGG	9 cut(s)	81, 473, 507, 519, 550, 571, 667, 826, 1213
BsiWI	CGTACG	1 cut(s)	762
BslFI	GGGAC	3 cut(s)	76, 884, 1534
BsmAI	GTCTC	3 cut(s)	139, 175, 491
BsmBI	CGTCTC	2 cut(s)	139, 175
BsmFI	GGGAC	3 cut(s)	76, 884, 1534
BsmI	GAATGC	3 cut(s)	831, 876, 1259
BsnI	GGCC	2 cut(s)	546, 600
Bso31I	GGTCTC	1 cut(s)	491
Bsp1286I	GDGCHC	3 cut(s)	56, 960, 1020
Bsp143I	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
Bsp1720I	GCTNAGC	1 cut(s)	809
Bsp19I	CCATGG	1 cut(s)	1524
BspANI	GGCC	2 cut(s)	546, 600
BspCNI	CTCAG	4 cut(s)	206, 666, 801, 1097
BspFNI	CGCG	5 cut(s)	183, 432, 453, 557, 1194
BspMAI	CTGCAG	1 cut(s)	735
BspMI	ACCTGC	1 cut(s)	738
BspPI	GGATC	3 cut(s)	48, 581, 1505
BspT107I	GGYRCC	2 cut(s)	840, 979
BspTNI	GGTCTC	1 cut(s)	491
BsrDI	GCAATG	1 cut(s)	357
BsrFI	RCCGGY	2 cut(s)	549, 825
BsrI	ACTGG	4 cut(s)	928, 974, 1070, 1274
BssAI	RCCGGY	2 cut(s)	549, 825
BssECI	CCNNGG	3 cut(s)	844, 1478, 1524
BssMI	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
BssNI	GRCGYC	1 cut(s)	897
BssT1I	CCWWGG	1 cut(s)	1524
Bst2UI	CCWGG	3 cut(s)	75, 846, 1004
Bst4CI	ACNGT	1 cut(s)	643
Bst6I	CTCTTC	2 cut(s)	134, 250
BstACI	GRCGYC	1 cut(s)	897
BstC8I	GCNNGC	6 cut(s)	10, 190, 798, 804, 876, 880
BstDEI	CTNAG	5 cut(s)	193, 674, 809, 985, 1084
BstDSI	CCRYGG	1 cut(s)	1524
BstF5I	GGATG	3 cut(s)	123, 1012, 1384
BstFNI	CGCG	5 cut(s)	183, 432, 453, 557, 1194
BstH2I	RGCGCY	2 cut(s)	803, 809
BstHHI	GCGC	4 cut(s)	185, 432, 802, 808
BstKTI	GATC	7 cut(s)	22, 43, 274, 576, 1475, 1500, 1563
BstMAI	GTCTC	3 cut(s)	139, 175, 491
BstMBI	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
BstMCI	CGRYCG	1 cut(s)	868
BstMWI	GCNNNNNNNGC	5 cut(s)	189, 368, 774, 884, 1456
BstNI	CCWGG	3 cut(s)	75, 846, 1004
BstSCI	CCNGG	9 cut(s)	73, 79, 471, 518, 569, 666, 844, 1002, 1211
BstSFI	CTRYAG	1 cut(s)	731
BstUI	CGCG	5 cut(s)	183, 432, 453, 557, 1194
BstV1I	GCAGC	2 cut(s)	576, 977
BstX2I	RGATCY	1 cut(s)	1472
BstYI	RGATCY	1 cut(s)	1472
Bsu36I	CCTNAGG	1 cut(s)	674
BsuRI	GGCC	2 cut(s)	546, 600
BtgI	CCRYGG	1 cut(s)	1524
BtrI	CACGTC	1 cut(s)	610
BtsCI	GGATG	3 cut(s)	123, 1012, 1384
BtsI	GCAGTG	1 cut(s)	1390
BtsIMutI	CAGTG	4 cut(s)	981, 1077, 1390, 1570
BveI	ACCTGC	1 cut(s)	738
Cac8I	GCNNGC	6 cut(s)	10, 190, 798, 804, 876, 880
CfoI	GCGC	4 cut(s)	185, 432, 802, 808
Cfr10I	RCCGGY	2 cut(s)	549, 825
Cfr13I	GGNCC	9 cut(s)	63, 77, 448, 544, 552, 670, 823, 1134, 1521
CpoI	CGGWCCG	1 cut(s)	552
CseI	GACGC	2 cut(s)	581, 886
Csp6I	GTAC	8 cut(s)	412, 682, 697, 763, 841, 940, 1231, 1377
CspAI	ACCGGT	2 cut(s)	549, 825
CspI	CGGWCCG	1 cut(s)	552
CviAII	CATG	6 cut(s)	757, 883, 1149, 1290, 1501, 1525
CviQI	GTAC	8 cut(s)	412, 682, 697, 763, 841, 940, 1231, 1377
DdeI	CTNAG	5 cut(s)	193, 674, 809, 985, 1084
DpnI	GATC	7 cut(s)	21, 42, 273, 575, 1474, 1499, 1562
DpnII	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
DraIII	CACNNNGTG	1 cut(s)	976
DrdI	GACNNNNNNGTC	1 cut(s)	662
DseDI	GACNNNNNNGTC	1 cut(s)	662
Eam1104I	CTCTTC	2 cut(s)	134, 250
EarI	CTCTTC	2 cut(s)	134, 250
EciI	GGCGGA	3 cut(s)	238, 358, 902
Ecl136II	GAGCTC	1 cut(s)	54
Eco130I	CCWWGG	1 cut(s)	1524
Eco24I	GRGCYC	3 cut(s)	56, 960, 1020
Eco31I	GGTCTC	1 cut(s)	491
Eco32I	GATATC	1 cut(s)	567
Eco47I	GGWCC	8 cut(s)	63, 77, 448, 552, 670, 823, 1134, 1521
Eco53kI	GAGCTC	1 cut(s)	54
Eco57I	CTGAAG	1 cut(s)	1037
Eco81I	CCTNAGG	1 cut(s)	674
EcoICRI	GAGCTC	1 cut(s)	54
EcoO109I	RGGNCCY	2 cut(s)	63, 670
EcoRI	GAATTC	1 cut(s)	1345
EcoRII	CCWGG	3 cut(s)	73, 844, 1002
EcoRV	GATATC	1 cut(s)	567
EcoT14I	CCWWGG	1 cut(s)	1524
EcoT22I	ATGCAT	2 cut(s)	999, 1261
EcoT38I	GRGCYC	3 cut(s)	56, 960, 1020
ErhI	CCWWGG	1 cut(s)	1524
Esp3I	CGTCTC	2 cut(s)	139, 175
FaeI	CATG	6 cut(s)	760, 886, 1152, 1293, 1504, 1528
FaqI	GGGAC	3 cut(s)	76, 884, 1534
FatI	CATG	6 cut(s)	756, 882, 1148, 1289, 1500, 1524
FauI	CCCGC	5 cut(s)	425, 498, 801, 1199, 1464
FauNDI	CATATG	1 cut(s)	1255
FblI	GTMKAC	1 cut(s)	153
Fnu4HI	GCNGC	9 cut(s)	186, 363, 481, 590, 769, 772, 775, 966, 1058
FokI	GGATG	3 cut(s)	110, 1019, 1371
FriOI	GRGCYC	3 cut(s)	56, 960, 1020
Fsp4HI	GCNGC	9 cut(s)	186, 363, 481, 590, 769, 772, 775, 966, 1058
FspBI	CTAG	1 cut(s)	93
GlaI	GCGC	4 cut(s)	184, 431, 801, 807
GluI	GCNGC	9 cut(s)	186, 363, 481, 590, 769, 772, 775, 966, 1058
GsuI	CTGGAG	1 cut(s)	275
HaeII	RGCGCY	2 cut(s)	803, 809
HaeIII	GGCC	2 cut(s)	546, 600
HapII	CCGG	9 cut(s)	81, 473, 507, 519, 550, 571, 667, 826, 1213
HgaI	GACGC	2 cut(s)	581, 886
HhaI	GCGC	4 cut(s)	185, 432, 802, 808
Hin1I	GRCGYC	1 cut(s)	897
Hin1II	CATG	6 cut(s)	760, 886, 1152, 1293, 1504, 1528
Hin6I	GCGC	4 cut(s)	183, 430, 800, 806
HinP1I	GCGC	4 cut(s)	183, 430, 800, 806
HinfI	GANTC	7 cut(s)	70, 559, 849, 1082, 1092, 1179, 1505
HpaII	CCGG	9 cut(s)	81, 473, 507, 519, 550, 571, 667, 826, 1213
HphI	GGTGA	7 cut(s)	517, 643, 917, 992, 1179, 1540, 1568
Hpy166II	GTNNAC	3 cut(s)	154, 525, 940
Hpy188I	TCNGA	9 cut(s)	45, 196, 276, 564, 721, 837, 862, 920, 1479
Hpy188III	TCNNGA	7 cut(s)	23, 93, 577, 622, 673, 709, 1424
Hpy8I	GTNNAC	3 cut(s)	154, 525, 940
Hpy99I	CGWCG	4 cut(s)	334, 635, 638, 866
HpyAV	CCTTC	7 cut(s)	220, 470, 1061, 1218, 1230, 1425, 1510
HpyCH4III	ACNGT	1 cut(s)	643
HpyCH4IV	ACGT	2 cut(s)	609, 1217
HpyF10VI	GCNNNNNNNGC	5 cut(s)	189, 368, 774, 884, 1456
HpyF3I	CTNAG	5 cut(s)	193, 674, 809, 985, 1084
HpySE526I	ACGT	2 cut(s)	609, 1217
Hsp92I	GRCGYC	1 cut(s)	897
Hsp92II	CATG	6 cut(s)	760, 886, 1152, 1293, 1504, 1528
HspAI	GCGC	4 cut(s)	183, 430, 800, 806
KflI	GGGWCCC	1 cut(s)	63
KpnI	GGTACC	1 cut(s)	844
Kzo9I	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
LmnI	GCTCC	6 cut(s)	51, 59, 89, 711, 863, 963
Lsp1109I	GCAGC	2 cut(s)	576, 977
LweI	GCATC	5 cut(s)	36, 234, 417, 1006, 1381
MaeI	CTAG	1 cut(s)	93
MaeII	ACGT	2 cut(s)	609, 1217
MaeIII	GTNAC	2 cut(s)	988, 1033
MalI	GATC	7 cut(s)	21, 42, 273, 575, 1474, 1499, 1562
MboI	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
MboII	GAAGA	8 cut(s)	121, 237, 403, 736, 1015, 1414, 1522, 1525
MflI	RGATCY	1 cut(s)	1472
MhlI	GDGCHC	3 cut(s)	56, 960, 1020
MluCI	AATT	5 cut(s)	285, 1167, 1225, 1345, 1486
MlyI	GAGTC	4 cut(s)	843, 1076, 1188, 1514
MmeI	TCCRAC	1 cut(s)	885
Mph1103I	ATGCAT	2 cut(s)	999, 1261
MroXI	GAANNNNTTC	1 cut(s)	740
MseI	TTAA	2 cut(s)	498, 1332
MslI	CAYNNNNRTG	2 cut(s)	930, 1005
MspA1I	CMGCKG	2 cut(s)	796, 1057
MspI	CCGG	9 cut(s)	81, 473, 507, 519, 550, 571, 667, 826, 1213
MspR9I	CCNGG	9 cut(s)	75, 81, 473, 520, 571, 668, 846, 1004, 1213
Mva1269I	GAATGC	3 cut(s)	831, 876, 1259
MvaI	CCWGG	3 cut(s)	75, 846, 1004
MvnI	CGCG	5 cut(s)	183, 432, 453, 557, 1194
MwoI	GCNNNNNNNGC	5 cut(s)	189, 368, 774, 884, 1456
NciI	CCSGG	6 cut(s)	81, 473, 520, 571, 668, 1213
NcoI	CCATGG	1 cut(s)	1524
NdeI	CATATG	1 cut(s)	1255
NdeII	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
NlaIII	CATG	6 cut(s)	760, 886, 1152, 1293, 1504, 1528
NmeAIII	GCCGAG	1 cut(s)	873
NmuCI	GTSAC	2 cut(s)	988, 1033
NsiI	ATGCAT	2 cut(s)	999, 1261
PaqCI	CACCTGC	1 cut(s)	738
PcsI	WCGNNNNNNNCGW	3 cut(s)	627, 639, 861
PctI	GAATGC	3 cut(s)	831, 876, 1259
PdmI	GAANNNNTTC	1 cut(s)	740
PfeI	GAWTC	3 cut(s)	70, 559, 1092
Pfl23II	CGTACG	1 cut(s)	762
PflFI	GACNNNGTC	1 cut(s)	1430
PflMI	CCANNNNNTGG	1 cut(s)	378
PfoI	TCCNGGA	3 cut(s)	73, 569, 1211
PinAI	ACCGGT	2 cut(s)	549, 825
PkrI	GCNGC	9 cut(s)	187, 364, 482, 591, 770, 773, 776, 967, 1059
PleI	GAGTC	4 cut(s)	843, 1076, 1187, 1513
PpsI	GAGTC	4 cut(s)	843, 1076, 1187, 1513
PpuMI	RGGWCCY	2 cut(s)	63, 670
Psp124BI	GAGCTC	1 cut(s)	56
Psp5II	RGGWCCY	2 cut(s)	63, 670
Psp6I	CCWGG	3 cut(s)	73, 844, 1002
PspGI	CCWGG	3 cut(s)	73, 844, 1002
PspLI	CGTACG	1 cut(s)	762
PspPI	GGNCC	9 cut(s)	63, 77, 448, 544, 552, 670, 823, 1134, 1521
PspPPI	RGGWCCY	2 cut(s)	63, 670
PstI	CTGCAG	1 cut(s)	735
PsuI	RGATCY	1 cut(s)	1472
PsyI	GACNNNGTC	1 cut(s)	1430
RsaI	GTAC	8 cut(s)	413, 683, 698, 764, 842, 941, 1232, 1378
RsaNI	GTAC	8 cut(s)	412, 682, 697, 763, 841, 940, 1231, 1377
RseI	CAYNNNNRTG	2 cut(s)	930, 1005
Rsr2I	CGGWCCG	1 cut(s)	552
RsrII	CGGWCCG	1 cut(s)	552
SacI	GAGCTC	1 cut(s)	56
SaqAI	TTAA	2 cut(s)	498, 1332
SatI	GCNGC	9 cut(s)	186, 363, 481, 590, 769, 772, 775, 966, 1058
Sau3AI	GATC	7 cut(s)	19, 40, 271, 573, 1472, 1497, 1560
Sau96I	GGNCC	9 cut(s)	63, 77, 448, 544, 552, 670, 823, 1134, 1521
ScaI	AGTACT	1 cut(s)	698
SchI	GAGTC	4 cut(s)	843, 1076, 1188, 1514
ScrFI	CCNGG	9 cut(s)	75, 81, 473, 520, 571, 668, 846, 1004, 1213
SduI	GDGCHC	3 cut(s)	56, 960, 1020
SfaNI	GCATC	5 cut(s)	36, 234, 417, 1006, 1381
SfcI	CTRYAG	1 cut(s)	731
SinI	GGWCC	8 cut(s)	63, 77, 448, 552, 670, 823, 1134, 1521
SmiMI	CAYNNNNRTG	2 cut(s)	930, 1005
SmlI	CTYRAG	2 cut(s)	161, 602
SmoI	CTYRAG	2 cut(s)	161, 602
Sse9I	AATT	5 cut(s)	285, 1167, 1225, 1345, 1486
SspMI	CTAG	1 cut(s)	93
SstI	GAGCTC	1 cut(s)	56
StyD4I	CCNGG	9 cut(s)	73, 79, 471, 518, 569, 666, 844, 1002, 1211
StyI	CCWWGG	1 cut(s)	1524
TaaI	ACNGT	1 cut(s)	643
TaiI	ACGT	2 cut(s)	612, 1220
TaqI	TCGA	3 cut(s)	425, 1434, 1508
TaqII	GACCGA	1 cut(s)	882
TasI	AATT	5 cut(s)	285, 1167, 1225, 1345, 1486
TatI	WGTACW	1 cut(s)	696
TauI	GCSGC	7 cut(s)	188, 365, 483, 771, 774, 777, 1060
TfiI	GAWTC	3 cut(s)	70, 559, 1092
Tru1I	TTAA	2 cut(s)	498, 1332
Tru9I	TTAA	2 cut(s)	498, 1332
TscAI	CASTG	4 cut(s)	981, 1077, 1397, 1570
TseFI	GTSAC	2 cut(s)	988, 1033
TseI	GCWGC	2 cut(s)	589, 965
Tsp45I	GTSAC	2 cut(s)	988, 1033
TspDTI	ATGAA	4 cut(s)	17, 637, 1137, 1430
TspGWI	ACGGA	2 cut(s)	347, 957
TspRI	CASTG	4 cut(s)	981, 1077, 1397, 1570
Tth111I	GACNNNGTC	1 cut(s)	1430
Van91I	CCANNNNNTGG	1 cut(s)	378
VpaK11BI	GGWCC	8 cut(s)	63, 77, 448, 552, 670, 823, 1134, 1521
XapI	RAATTY	3 cut(s)	285, 1167, 1345
XbaI	TCTAGA	1 cut(s)	92
XmiI	GTMKAC	1 cut(s)	153
XmnI	GAANNNNTTC	1 cut(s)	740
XspI	CTAG	1 cut(s)	93
ZrmI	AGTACT	1 cut(s)	698
Zsp2I	ATGCAT	2 cut(s)	999, 1261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.