Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0008233

Physical Location & Seq

Genomic Coordinates Reverse (-)

53292468 .. 53296791

Gene Structure 4324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00258880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGAAAGGCAGCCTGAACAAAGATTCGGGAGAGAAAGTGATTTGGGATCAGATGCGGAGCTCCACAGGGAACCCTTTACCTGGTCCTGGTTCTCAATCTTCTCGAACCACCCCTAAACTCCTCGTCTGGCTCATCCTCTTCGTCTCCGTCACTTACATCGTCTACACCCTCAAGCTCGTCTCCACCTCACGCGCCGCCTGCGACGACGTCGACGATCCCTTCTCCACCCCCCGCCACATCACCACCACCACCTCATTACTCGCCAACACCAACAACAACAACGTCACGGAAGATCGAACCGCCCAGATTCTCCGGCTCAAACCGGAGCCGGAGAAAACCGACGTCAAGCACATAGCGTTCGGCATTGCCGCGTCGGGCAAGCTGTGGGCCCAGAGGAAGAGCTACATCAAGCTCTGGTACAAGCCGGACTCCATGCGCGGCGTAGTGTGGCTGGACCGGGGCGTGGCCAATCGCAGCGGCGAGGGGCTCCCGCCGCTCAAGATCTCCGGCGACACCTCCGGGTTCGGGTACACCAACAAGCAGGGCCACCGCTCCGCCATCCGGATCTCGCGGATCGTCTCCGAAACGCTGCGTTTGGGCCTCAAGGACGTCCGCTGGTTCGTCATGGGCGACGACGACACCGTCTTCATCACCGACAACCTCGTACGCGTCCTCCGGAAATACGACCACACCCAGTACTACTACATTGGCTCCCTGTCGGAATCCCACTTGCAGAACATCTTCTTCTCGTACGGCATGGCGTACGGCGGCGGCGGCTTCGCCATCAGCTACCCTCTGGCCGAGGCCCTAAGCAAAATGCAAGACAGGTGCATACAACGTTATCCCGGTCTGTACGGCTCCGACGACCGAATGCAGGCGTGCATGGCCGAACTCGGTGTTCCACTCACTAAAGAACTCGGCTTTCACCAGTATGACGTGTATGGGAACCTATTTGGACTCCTTGCAGCACACCCGGTGGCACCCTTGGTTACATTGCATCACCTTGATGTGGTTGAGCCCATCTTTCCCAACGTTACCCGAGTTCAAGCCCTTCAGCAGCTTATGGTCCCAGTGAAGCTGGACTCAGCAGGAATCATGCAACAATCTATCTGTTATGACAAGTCAAAGAGCTGGACCATTTCCGTTTCATGGGGCTTTGCTGTCCAAATTTTTCGAGGAGTTTTTTCACCCCGGGAGATGGAAATGCCTTCCCGAACGTTTTTGAACTGGTACAGAAGAGCAGATTTCACTGCATATGCATTCAACACGCGTCCAGTTAGCCGAAACCCTTGCCAGAAACCTTTTGTGTTTTACTTGTCAAAGGCAAAATTCAATTCTACAATGAATACGACATTCAGCGAGTATGTCCAGCATCGCGCCCCTCATCCCTTGTGCAAGTGGAAGATGGCTGATCCTGCTAGATTTGAGAAAGTTGAGGTCTATAAGAAGCCTGACCCTCAGCTGTGGAATAGATCGCCGAGGAGAAATTGCTGCAGGGTCAGAAACCCGAAGCAGAAGAAAGGAACCATGGTGATAGATGTTGGTTTATGTAAAGAGGGTGAGATCAGTGAAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF604

Protein Analysis

525

Amino Acids

59.54

Weight (kDa)

9.49

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fringe	PF02434	182 - 310	6.2e-15	Fringe-like
DUF604	PF04646	245 - 498	1.1e-117	Protein of unknown function, DUF604

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11350 AT4G11350 AT4G23490 AT5G41460
fragaria_vesca	FvH4_5g02990 FvH4_5g02990
malus_domestica	MD00G1086500.v1.1 MD06G1088800.v1.1
prunus_persica	Prupe.5G104700_v2.0.a1
pyrus_communis	pycom06g08470 pycom14g10430
rosa_chinensis	RchiOBHm_Chr7g0196881 RchiOBHm_Chr7g0196891
rosa_laevigata	RLG00000003981
rosa_multiflora	Rmu_co8224972.1_g000001 Rmu_co8340915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258880
rosa_rugosa	Rorug07G0036400
rosa_samantha	Rh7AG160900 Rh7BG163100 Rh7CG169200 Rh7DG162500
rosa_wichuraiana	Rw7G014070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	641
AatII	GACGTC	3 cut(s)	210, 345, 612
AccB1I	GGYRCC	1 cut(s)	979
AccBSI	CCGCTC	2 cut(s)	496, 552
AccI	GTMKAC	2 cut(s)	162, 210
AccII	CGCG	7 cut(s)	192, 371, 438, 571, 669, 1270, 1377
AccIII	TCCGGA	2 cut(s)	561, 675
AclI	AACGTT	3 cut(s)	838, 1032, 1217
AclWI	GGATC	5 cut(s)	54, 209, 572, 581, 1406
AcoI	YGGCCR	3 cut(s)	465, 798, 885
AcsI	RAATTY	2 cut(s)	1167, 1328
AcuI	CTGAAG	1 cut(s)	1037
AcyI	GRCGYC	3 cut(s)	207, 342, 609
AdeI	CACNNNGTG	1 cut(s)	976
AfaI	GTAC	8 cut(s)	419, 530, 666, 698, 752, 764, 854, 1232
AfiI	CCNNNNNNNGG	9 cut(s)	80, 86, 463, 525, 561, 874, 1009, 1149, 1198
AflIII	ACRYGT	3 cut(s)	667, 936, 1268
AgsI	TTSAA	4 cut(s)	1046, 1225, 1264, 1333
AjiI	CACGTC	1 cut(s)	937
AjnI	CCWGG	2 cut(s)	79, 85
Alw21I	GWGCWC	1 cut(s)	62
Alw26I	GTCTC	3 cut(s)	148, 184, 583
AlwI	GGATC	5 cut(s)	54, 209, 572, 581, 1406
Ama87I	CYCGRG	2 cut(s)	1038, 1191
Aor13HI	TCCGGA	2 cut(s)	561, 675
AoxI	GGCC	7 cut(s)	387, 465, 544, 598, 798, 804, 885
ApaI	GGGCCC	1 cut(s)	391
ApeKI	GCWGC	6 cut(s)	9, 474, 589, 965, 1057, 1491
ApoI	RAATTY	2 cut(s)	1167, 1328
Asp700I	GAANNNNTTC	1 cut(s)	740
AspLEI	GCGC	3 cut(s)	194, 438, 1379
AspS9I	GGNCC	9 cut(s)	83, 387, 388, 454, 544, 598, 805, 1066, 1134
AsuC2I	CCSGG	6 cut(s)	458, 520, 846, 974, 1192, 1193
AsuHPI	GGTGA	7 cut(s)	232, 643, 917, 992, 1179, 1543, 1571
AvaI	CYCGRG	2 cut(s)	1038, 1191
AvaII	GGWCC	4 cut(s)	83, 454, 1066, 1134
BaeGI	GKGCMC	1 cut(s)	391
BalI	TGGCCA	1 cut(s)	467
BanI	GGYRCC	1 cut(s)	979
BanII	GRGCYC	4 cut(s)	62, 391, 489, 1020
BbsI	GAAGAC	1 cut(s)	637
Bbv12I	GWGCWC	1 cut(s)	62
BbvCI	CCTCAGC	1 cut(s)	1458
BbvI	GCAGC	6 cut(s)	21, 486, 576, 977, 1069, 1478
BccI	CCATC	5 cut(s)	566, 791, 1028, 1192, 1399
BceAI	ACGGC	3 cut(s)	769, 781, 871
BcgI	CGANNNNNNTGC	2 cut(s)	1272, 1306
BciT130I	CCWGG	2 cut(s)	81, 87
BcnI	CCSGG	6 cut(s)	458, 520, 846, 974, 1192, 1193
BcoDI	GTCTC	3 cut(s)	148, 184, 583
BfaI	CTAG	1 cut(s)	1419
BfmI	CTRYAG	1 cut(s)	1492
BglII	AGATCT	1 cut(s)	501
BmcAI	AGTACT	1 cut(s)	698
Bme1390I	CCNGG	8 cut(s)	81, 87, 458, 520, 846, 974, 1192, 1193
Bme18I	GGWCC	4 cut(s)	83, 454, 1066, 1134
BmeT110I	CYCGRG	2 cut(s)	1038, 1191
BmgBI	CACGTC	1 cut(s)	937
BmgT120I	GGNCC	9 cut(s)	83, 387, 388, 454, 544, 598, 805, 1066, 1134
BmrFI	CCNGG	8 cut(s)	81, 87, 458, 520, 846, 974, 1192, 1193
BmrI	ACTGGG	2 cut(s)	688, 1064
BmsI	GCATC	3 cut(s)	42, 1006, 1381
BmuI	ACTGGG	2 cut(s)	688, 1064
BpiI	GAAGAC	1 cut(s)	637
Bpu10I	CCTNAGC	2 cut(s)	809, 1458
BpuEI	CTTGAG	3 cut(s)	155, 482, 587
BpuMI	CCSGG	6 cut(s)	458, 520, 846, 974, 1192, 1193
BsaHI	GRCGYC	3 cut(s)	207, 342, 609
BsaJI	CCNNGG	7 cut(s)	457, 801, 984, 1190, 1191, 1478, 1527
BsaWI	WCCGGW	3 cut(s)	322, 561, 675
BsaXI	ACNNNNNCTCC	6 cut(s)	21, 51, 657, 687, 695, 725
Bsc4I	CCNNNNNNNGG	9 cut(s)	80, 86, 463, 525, 561, 874, 1009, 1149, 1198
Bse1I	ACTGG	5 cut(s)	694, 928, 1070, 1232, 1274
Bse3DI	GCAATG	2 cut(s)	363, 992
BseAI	TCCGGA	2 cut(s)	561, 675
BseBI	CCWGG	2 cut(s)	81, 87
BseDI	CCNNGG	7 cut(s)	457, 801, 984, 1190, 1191, 1478, 1527
BseGI	GGATG	3 cut(s)	132, 558, 1384
BseLI	CCNNNNNNNGG	9 cut(s)	80, 86, 463, 525, 561, 874, 1009, 1149, 1198
BseMI	GCAATG	2 cut(s)	363, 992
BseMII	CTCAG	2 cut(s)	1098, 1472
BseNI	ACTGG	5 cut(s)	694, 928, 1070, 1232, 1274
BseRI	GAGGAG	3 cut(s)	110, 1191, 1495
BseSI	GKGCMC	1 cut(s)	391
BseXI	GCAGC	6 cut(s)	21, 486, 576, 977, 1069, 1478
Bsh1236I	CGCG	7 cut(s)	192, 371, 438, 571, 669, 1270, 1377
Bsh1285I	CGRYCG	1 cut(s)	868
BshFI	GGCC	7 cut(s)	389, 467, 546, 600, 800, 806, 887
BshNI	GGYRCC	1 cut(s)	979
BsiEI	CGRYCG	1 cut(s)	868
BsiHKAI	GWGCWC	1 cut(s)	62
BsiHKCI	CYCGRG	2 cut(s)	1038, 1191
BsiWI	CGTACG	3 cut(s)	664, 750, 762
BslFI	GGGAC	1 cut(s)	1052
BslI	CCNNNNNNNGG	9 cut(s)	80, 86, 463, 525, 561, 874, 1009, 1149, 1198
BsmAI	GTCTC	3 cut(s)	148, 184, 583
BsmBI	CGTCTC	3 cut(s)	148, 184, 583
BsmFI	GGGAC	1 cut(s)	1052
BsmI	GAATGC	2 cut(s)	876, 1259
BsnI	GGCC	7 cut(s)	389, 467, 546, 600, 800, 806, 887
BsoBI	CYCGRG	2 cut(s)	1038, 1191
Bsp120I	GGGCCC	1 cut(s)	387
Bsp1286I	GDGCHC	4 cut(s)	62, 391, 489, 1020
Bsp13I	TCCGGA	2 cut(s)	561, 675
Bsp143I	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
Bsp19I	CCATGG	1 cut(s)	1527
BspANI	GGCC	7 cut(s)	389, 467, 546, 600, 800, 806, 887
BspCNI	CTCAG	2 cut(s)	1097, 1471
BspEI	TCCGGA	2 cut(s)	561, 675
BspFNI	CGCG	7 cut(s)	192, 371, 438, 571, 669, 1270, 1377
BspMAI	CTGCAG	1 cut(s)	1496
BspPI	GGATC	5 cut(s)	54, 209, 572, 581, 1406
BspQI	GCTCTTC	2 cut(s)	392, 1231
BspT107I	GGYRCC	1 cut(s)	979
BsrBI	CCGCTC	2 cut(s)	496, 552
BsrDI	GCAATG	2 cut(s)	363, 992
BsrI	ACTGG	5 cut(s)	694, 928, 1070, 1232, 1274
BssECI	CCNNGG	7 cut(s)	457, 801, 984, 1190, 1191, 1478, 1527
BssMI	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
BssNI	GRCGYC	3 cut(s)	207, 342, 609
BssT1I	CCWWGG	2 cut(s)	984, 1527
Bst2UI	CCWGG	2 cut(s)	81, 87
Bst4CI	ACNGT	1 cut(s)	643
Bst6I	CTCTTC	3 cut(s)	143, 392, 1231
BstACI	GRCGYC	3 cut(s)	207, 342, 609
BstC8I	GCNNGC	4 cut(s)	199, 380, 876, 880
BstDEI	CTNAG	3 cut(s)	809, 1084, 1458
BstDSI	CCRYGG	1 cut(s)	1527
BstF5I	GGATG	3 cut(s)	132, 558, 1384
BstFNI	CGCG	7 cut(s)	192, 371, 438, 571, 669, 1270, 1377
BstHHI	GCGC	3 cut(s)	194, 438, 1379
BstKTI	GATC	9 cut(s)	49, 217, 295, 504, 567, 576, 1414, 1475, 1566
BstMAI	GTCTC	3 cut(s)	148, 184, 583
BstMBI	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
BstMCI	CGRYCG	1 cut(s)	868
BstMWI	GCNNNNNNNGC	5 cut(s)	198, 493, 774, 884, 1415
BstNI	CCWGG	2 cut(s)	81, 87
BstSCI	CCNGG	8 cut(s)	79, 85, 456, 518, 844, 972, 1190, 1191
BstSFI	CTRYAG	1 cut(s)	1492
BstSLI	GKGCMC	1 cut(s)	391
BstUI	CGCG	7 cut(s)	192, 371, 438, 571, 669, 1270, 1377
BstV1I	GCAGC	6 cut(s)	21, 486, 576, 977, 1069, 1478
BstV2I	GAAGAC	1 cut(s)	637
BstX2I	RGATCY	2 cut(s)	501, 564
BstYI	RGATCY	2 cut(s)	501, 564
BsuRI	GGCC	7 cut(s)	389, 467, 546, 600, 800, 806, 887
BtgI	CCRYGG	1 cut(s)	1527
BtgZI	GCGATG	1 cut(s)	1358
BtrI	CACGTC	1 cut(s)	937
BtsCI	GGATG	3 cut(s)	132, 558, 1384
BtsI	GCAGTG	1 cut(s)	1248
BtsIMutI	CAGTG	3 cut(s)	1077, 1248, 1573
Cac8I	GCNNGC	4 cut(s)	199, 380, 876, 880
CfoI	GCGC	3 cut(s)	194, 438, 1379
Cfr13I	GGNCC	9 cut(s)	83, 387, 388, 454, 544, 598, 805, 1066, 1134
Cfr9I	CCCGGG	1 cut(s)	1191
CseI	GACGC	3 cut(s)	360, 658, 1259
CsiI	ACCWGGT	1 cut(s)	79
Csp6I	GTAC	8 cut(s)	418, 529, 665, 697, 751, 763, 853, 1231
CviAII	CATG	7 cut(s)	433, 625, 757, 883, 1096, 1149, 1528
CviQI	GTAC	8 cut(s)	418, 529, 665, 697, 751, 763, 853, 1231
DdeI	CTNAG	3 cut(s)	809, 1084, 1458
DpnI	GATC	9 cut(s)	48, 216, 294, 503, 566, 575, 1413, 1474, 1565
DpnII	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
DraIII	CACNNNGTG	1 cut(s)	976
DrdI	GACNNNNNNGTC	1 cut(s)	641
DseDI	GACNNNNNNGTC	1 cut(s)	641
EaeI	YGGCCR	3 cut(s)	465, 798, 885
Eam1104I	CTCTTC	3 cut(s)	143, 392, 1231
EarI	CTCTTC	3 cut(s)	143, 392, 1231
EciI	GGCGGA	1 cut(s)	544
Ecl136II	GAGCTC	1 cut(s)	60
Eco130I	CCWWGG	2 cut(s)	984, 1527
Eco24I	GRGCYC	4 cut(s)	62, 391, 489, 1020
Eco47I	GGWCC	4 cut(s)	83, 454, 1066, 1134
Eco53kI	GAGCTC	1 cut(s)	60
Eco57I	CTGAAG	1 cut(s)	1037
Eco88I	CYCGRG	2 cut(s)	1038, 1191
EcoICRI	GAGCTC	1 cut(s)	60
EcoO109I	RGGNCCY	1 cut(s)	805
EcoRII	CCWGG	2 cut(s)	79, 85
EcoT14I	CCWWGG	2 cut(s)	984, 1527
EcoT22I	ATGCAT	1 cut(s)	1261
EcoT38I	GRGCYC	4 cut(s)	62, 391, 489, 1020
ErhI	CCWWGG	2 cut(s)	984, 1527
Esp3I	CGTCTC	3 cut(s)	148, 184, 583
FaeI	CATG	7 cut(s)	436, 628, 760, 886, 1099, 1152, 1531
FaqI	GGGAC	1 cut(s)	1052
FatI	CATG	7 cut(s)	432, 624, 756, 882, 1095, 1148, 1527
FauI	CCCGC	2 cut(s)	239, 498
FauNDI	CATATG	1 cut(s)	1255
FblI	GTMKAC	2 cut(s)	162, 210
FokI	GGATG	3 cut(s)	119, 545, 1371
FriOI	GRGCYC	4 cut(s)	62, 391, 489, 1020
FspBI	CTAG	1 cut(s)	1419
GlaI	GCGC	3 cut(s)	193, 437, 1378
HaeIII	GGCC	7 cut(s)	389, 467, 546, 600, 800, 806, 887
HgaI	GACGC	3 cut(s)	360, 658, 1259
HhaI	GCGC	3 cut(s)	194, 438, 1379
Hin1I	GRCGYC	3 cut(s)	207, 342, 609
Hin1II	CATG	7 cut(s)	436, 628, 760, 886, 1099, 1152, 1531
Hin6I	GCGC	3 cut(s)	192, 436, 1377
HinP1I	GCGC	3 cut(s)	192, 436, 1377
HincII	GTYRAC	1 cut(s)	211
HindII	GTYRAC	1 cut(s)	211
HinfI	GANTC	7 cut(s)	23, 307, 428, 722, 957, 1082, 1092
HphI	GGTGA	7 cut(s)	232, 643, 917, 992, 1179, 1543, 1571
Hpy166II	GTNNAC	3 cut(s)	163, 211, 531
Hpy188I	TCNGA	5 cut(s)	51, 583, 721, 862, 1502
Hpy188III	TCNNGA	6 cut(s)	27, 102, 499, 562, 676, 1212
Hpy8I	GTNNAC	3 cut(s)	163, 211, 531
Hpy99I	CGWCG	9 cut(s)	206, 209, 212, 215, 344, 376, 635, 638, 866
HpyAV	CCTTC	3 cut(s)	229, 1061, 1218
HpyCH4III	ACNGT	1 cut(s)	643
HpyCH4IV	ACGT	8 cut(s)	207, 282, 342, 609, 838, 936, 1032, 1217
HpyF10VI	GCNNNNNNNGC	5 cut(s)	198, 493, 774, 884, 1415
HpyF3I	CTNAG	3 cut(s)	809, 1084, 1458
HpySE526I	ACGT	8 cut(s)	207, 282, 342, 609, 838, 936, 1032, 1217
Hsp92I	GRCGYC	3 cut(s)	207, 342, 609
Hsp92II	CATG	7 cut(s)	436, 628, 760, 886, 1099, 1152, 1531
HspAI	GCGC	3 cut(s)	192, 436, 1377
Kpn2I	TCCGGA	2 cut(s)	561, 675
Kzo9I	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
LguI	GCTCTTC	2 cut(s)	392, 1231
LmnI	GCTCC	7 cut(s)	57, 65, 325, 492, 557, 716, 863
Lsp1109I	GCAGC	6 cut(s)	21, 486, 576, 977, 1069, 1478
LweI	GCATC	3 cut(s)	42, 1006, 1381
MabI	ACCWGGT	1 cut(s)	79
MaeI	CTAG	1 cut(s)	1419
MaeII	ACGT	8 cut(s)	207, 282, 342, 609, 838, 936, 1032, 1217
MaeIII	GTNAC	4 cut(s)	148, 283, 988, 1033
MalI	GATC	9 cut(s)	48, 216, 294, 503, 566, 575, 1413, 1474, 1565
MbiI	CCGCTC	2 cut(s)	496, 552
MboI	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
MflI	RGATCY	2 cut(s)	501, 564
MhlI	GDGCHC	4 cut(s)	62, 391, 489, 1020
MlsI	TGGCCA	1 cut(s)	467
MluCI	AATT	4 cut(s)	1167, 1328, 1333, 1486
MluI	ACGCGT	2 cut(s)	667, 1268
MluNI	TGGCCA	1 cut(s)	467
MlyI	GAGTC	3 cut(s)	422, 951, 1076
MmeI	TCCRAC	2 cut(s)	699, 885
Mox20I	TGGCCA	1 cut(s)	467
Mph1103I	ATGCAT	1 cut(s)	1261
MroI	TCCGGA	2 cut(s)	561, 675
MroXI	GAANNNNTTC	1 cut(s)	740
MscI	TGGCCA	1 cut(s)	467
MslI	CAYNNNNRTG	2 cut(s)	930, 1005
Msp20I	TGGCCA	1 cut(s)	467
MspA1I	CMGCKG	3 cut(s)	477, 615, 1462
MspR9I	CCNGG	8 cut(s)	81, 87, 458, 520, 846, 974, 1192, 1193
Mva1269I	GAATGC	2 cut(s)	876, 1259
MvaI	CCWGG	2 cut(s)	81, 87
MvnI	CGCG	7 cut(s)	192, 371, 438, 571, 669, 1270, 1377
MwoI	GCNNNNNNNGC	5 cut(s)	198, 493, 774, 884, 1415
NciI	CCSGG	6 cut(s)	458, 520, 846, 974, 1192, 1193
NcoI	CCATGG	1 cut(s)	1527
NdeI	CATATG	1 cut(s)	1255
NdeII	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
NlaIII	CATG	7 cut(s)	436, 628, 760, 886, 1099, 1152, 1531
NmeAIII	GCCGAG	3 cut(s)	826, 897, 1503
NmuCI	GTSAC	2 cut(s)	148, 283
NsiI	ATGCAT	1 cut(s)	1261
PciSI	GCTCTTC	2 cut(s)	392, 1231
PcsI	WCGNNNNNNNCGW	4 cut(s)	210, 627, 639, 861
PctI	GAATGC	2 cut(s)	876, 1259
PdmI	GAANNNNTTC	1 cut(s)	740
PfeI	GAWTC	4 cut(s)	23, 307, 722, 1092
Pfl23II	CGTACG	3 cut(s)	664, 750, 762
PflFI	GACNNNGTC	2 cut(s)	206, 641
PleI	GAGTC	3 cut(s)	422, 951, 1076
PpsI	GAGTC	3 cut(s)	422, 951, 1076
Psp124BI	GAGCTC	1 cut(s)	62
Psp1406I	AACGTT	3 cut(s)	838, 1032, 1217
Psp6I	CCWGG	2 cut(s)	79, 85
PspGI	CCWGG	2 cut(s)	79, 85
PspLI	CGTACG	3 cut(s)	664, 750, 762
PspOMI	GGGCCC	1 cut(s)	387
PspPI	GGNCC	9 cut(s)	83, 387, 388, 454, 544, 598, 805, 1066, 1134
PstI	CTGCAG	1 cut(s)	1496
PsuI	RGATCY	2 cut(s)	501, 564
PsyI	GACNNNGTC	2 cut(s)	206, 641
PvuII	CAGCTG	1 cut(s)	1462
RsaI	GTAC	8 cut(s)	419, 530, 666, 698, 752, 764, 854, 1232
RsaNI	GTAC	8 cut(s)	418, 529, 665, 697, 751, 763, 853, 1231
RseI	CAYNNNNRTG	2 cut(s)	930, 1005
SacI	GAGCTC	1 cut(s)	62
SalI	GTCGAC	1 cut(s)	209
SapI	GCTCTTC	2 cut(s)	392, 1231
Sau3AI	GATC	9 cut(s)	46, 214, 292, 501, 564, 573, 1411, 1472, 1563
Sau96I	GGNCC	9 cut(s)	83, 387, 388, 454, 544, 598, 805, 1066, 1134
ScaI	AGTACT	1 cut(s)	698
SchI	GAGTC	3 cut(s)	422, 951, 1076
ScrFI	CCNGG	8 cut(s)	81, 87, 458, 520, 846, 974, 1192, 1193
SduI	GDGCHC	4 cut(s)	62, 391, 489, 1020
SexAI	ACCWGGT	1 cut(s)	79
SfaNI	GCATC	3 cut(s)	42, 1006, 1381
SfcI	CTRYAG	1 cut(s)	1492
SgrDI	CGTCGACG	1 cut(s)	209
SinI	GGWCC	4 cut(s)	83, 454, 1066, 1134
SmaI	CCCGGG	1 cut(s)	1193
SmiMI	CAYNNNNRTG	2 cut(s)	930, 1005
SmlI	CTYRAG	3 cut(s)	170, 497, 602
SmoI	CTYRAG	3 cut(s)	170, 497, 602
Sse9I	AATT	4 cut(s)	1167, 1328, 1333, 1486
SspMI	CTAG	1 cut(s)	1419
SstI	GAGCTC	1 cut(s)	62
StyD4I	CCNGG	8 cut(s)	79, 85, 456, 518, 844, 972, 1190, 1191
StyI	CCWWGG	2 cut(s)	984, 1527
TaaI	ACNGT	1 cut(s)	643
TaiI	ACGT	8 cut(s)	210, 285, 345, 612, 841, 939, 1035, 1220
TaqI	TCGA	4 cut(s)	103, 210, 295, 1174
TaqII	GACCGA	1 cut(s)	882
TasI	AATT	4 cut(s)	1167, 1328, 1333, 1486
TatI	WGTACW	1 cut(s)	696
TauI	GCSGC	8 cut(s)	197, 371, 441, 480, 496, 771, 774, 777
TfiI	GAWTC	4 cut(s)	23, 307, 722, 1092
TscAI	CASTG	3 cut(s)	1077, 1255, 1573
TseFI	GTSAC	2 cut(s)	148, 283
TseI	GCWGC	6 cut(s)	9, 474, 589, 965, 1057, 1491
Tsp45I	GTSAC	2 cut(s)	148, 283
TspDTI	ATGAA	4 cut(s)	17, 637, 1137, 1358
TspGWI	ACGGA	3 cut(s)	136, 302, 1132
TspMI	CCCGGG	1 cut(s)	1191
TspRI	CASTG	3 cut(s)	1077, 1255, 1573
Tth111I	GACNNNGTC	2 cut(s)	206, 641
VpaK11BI	GGWCC	4 cut(s)	83, 454, 1066, 1134
XapI	RAATTY	2 cut(s)	1167, 1328
XmaI	CCCGGG	1 cut(s)	1191
XmiI	GTMKAC	2 cut(s)	162, 210
XmnI	GAANNNNTTC	1 cut(s)	740
XspI	CTAG	1 cut(s)	1419
ZraI	GACGTC	3 cut(s)	208, 343, 610
ZrmI	AGTACT	1 cut(s)	698
Zsp2I	ATGCAT	1 cut(s)	1261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.