MD00G1089400.v1.1

DUF1771

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
18475463 .. 18486672
11210 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1089400.v1.1.491

Sequence Viewer

Length: 1416 bp
ATGGTTTCTCTTAAGGACATAGCCTCCGCATACTGCCAGGCGAAGTGCAATGTAGAAATGGCTGGTGAAATTCTTTGCAGATCACATTTAACTTCCTCAAACGGTGCTAGTTCCTCAAAAGTTAAGCTTGAGGGTGCAAGCGCAACTTCTTTGGAAGGCCCGGAATCTGGACGGGACTTTGCAAGTGCAGTTCATGCAGGTGTGTCAACCGCCAAAAGTATTCAGAATCCCTTCAATGGAATGGACAACACCAGAGCATTGAAGTCAAAAAAACTTTCTGCTTCAGTGGGTACTGTTTCAGGGATGATTGGAAAGGAGTACAGTAGGCCCAGAGCATCAACAATTGAATATACTGAAGTGAAGAAACCATTAAAACTAGATTGGAAAGAAGTGCCTGCCTCTGCGATATGGAGTGAAGAAGTCCAATCAACCACGCCACCAACAAACAGCAAACTGCAAGCTGATGCTGAAGAATTTCTGTGTAAAATGCTTGGAGAGGGCTTTAAACTTGATATGAATGTGATCCGAGAAGTTCTTGGCCTTTGTGGATATGATGTGCAGAAGAGCATGGAGAATCTTCTTTTCATGTCAGCATCAACATTGGAGAAGTCTGATGATGTTGTCGGCTTAGCTGGTTTGAAGTCTGCAGAGAAGCGTCCAGATCAACATTCTGCCCATAGTGATTTATCTGAATCACCAGTAGGAGAAGGAGATGGGCTTCTTAGCCAACAGGTTTTACAAGCATTGTTTCATGTTCCTGAAAGAACTGACGAAGCACCTAAAAGAAGTCTCCCATCGAGGGAAGTGAAAAGATATAAATACAAGGGACTTAAGGGATACGTGGTTAAACCATTTATAGACACGGTTGTAGAATGTAAAGCTACTGTAGCACTAGCACCACAAGGAGTTTCCGGGCCAGATGGAGATGATGATAATGGCTATGAGGTCCTACGTAAATCTGTGAAAGAATACTGGATCACAATGAAGGAATACTATAAAGCTGCTTTTAATGCATTTTGTGAGGGTGATCGTGCACGTTCAGACAAACTGCTAGAGAAGGGACATTACTTTAACAAAATGGCACGGGAAGCAGACGAAAAATCTGCTCAAATGCTTATTCAAGCTCAGAGTAGTGAAGATGATGTGTCTCTTGACTTGCAAAACCACGAGCCCAAGGAAGCTATACGTCTTCTAAGATCTCAGTTAACCTATCTCTCTGGCATCCCAGCTTTCAAGTATCTTCGGGTCATAGTGGGATTGAATGATGAAGATACAACAGGAGGAGCCCGGAGAAGACTGATTGTGAAGCAACTGGAGAAGGAATCGATCAAATGGACCGAGGAGGAGAACGGGAGGACAATATCGATCCGAGTGGATGAAATTGACCCGAAAAGCTTGAGCTTCTCAAAAAAATGA

Protein Analysis

472

Amino Acids

51.93

Weight (kDa)

6.27

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1771 PF08590 314 - 375 7.3e-11 Domain of unknown function (DUF1771)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 188
Acc36I ACCTGC 1 cut(s) 188
AciI CCGC 2 cut(s) 27, 210
AclWI GGATC 3 cut(s) 517, 983, 1360
AcsI RAATTY 2 cut(s) 69, 473
AcuI CTGAAG 3 cut(s) 267, 375, 489
AfaI GTAC 2 cut(s) 292, 320
AfiI CCNNNNNNNGG 3 cut(s) 167, 236, 799
AflII CTTAAG 2 cut(s) 11, 830
AgsI TTSAA 7 cut(s) 235, 262, 347, 640, 1121, 1234, 1261
AjnI CCWGG 1 cut(s) 36
Alw21I GWGCWC 1 cut(s) 1036
Alw26I GTCTC 2 cut(s) 794, 1152
Alw44I GTGCAC 1 cut(s) 1032
AlwI GGATC 3 cut(s) 517, 983, 1360
AoxI GGCC 4 cut(s) 157, 326, 538, 914
ApaLI GTGCAC 1 cut(s) 1032
ApeKI GCWGC 1 cut(s) 1001
ApoI RAATTY 2 cut(s) 69, 473
Asp700I GAANNNNTTC 2 cut(s) 230, 474
AspLEI GCGC 1 cut(s) 143
AspS9I GGNCC 5 cut(s) 158, 327, 914, 946, 1335
AsuC2I CCSGG 3 cut(s) 161, 913, 1288
AsuHPI GGTGA 3 cut(s) 77, 687, 1037
AvaII GGWCC 2 cut(s) 946, 1335
BaeGI GKGCMC 1 cut(s) 1036
BanII GRGCYC 2 cut(s) 1173, 1288
BarI GAAGNNNNNNTAC 2 cut(s) 1049, 1081
BauI CACGAG 1 cut(s) 1166
BbsI GAAGAC 2 cut(s) 1181, 1300
Bbv12I GWGCWC 1 cut(s) 1036
BbvI GCAGC 1 cut(s) 988
BccI CCATC 3 cut(s) 707, 802, 914
BcgI CGANNNNNNTGC 2 cut(s) 1085, 1119
BciT130I CCWGG 1 cut(s) 38
BciVI GTATCC 1 cut(s) 830
BcnI CCSGG 3 cut(s) 161, 913, 1288
BcoDI GTCTC 2 cut(s) 794, 1152
BfaI CTAG 4 cut(s) 108, 377, 893, 1052
BfmI CTRYAG 2 cut(s) 645, 885
BfrI CTTAAG 2 cut(s) 11, 830
BfuAI ACCTGC 1 cut(s) 188
BfuI GTATCC 1 cut(s) 830
BglII AGATCT 1 cut(s) 1196
BisI GCNGC 1 cut(s) 1002
BlpI GCTNAGC 1 cut(s) 628
BlsI GCNGC 1 cut(s) 1003
Bme1390I CCNGG 4 cut(s) 38, 161, 913, 1288
Bme18I GGWCC 2 cut(s) 946, 1335
BmgT120I GGNCC 5 cut(s) 158, 327, 914, 946, 1335
BmiI GGNNCC 1 cut(s) 1285
BmrFI CCNGG 4 cut(s) 38, 161, 913, 1288
BmsI GCATC 4 cut(s) 344, 454, 602, 1230
BpiI GAAGAC 2 cut(s) 1181, 1300
BpmI CTGGAG 1 cut(s) 1334
Bpu1102I GCTNAGC 1 cut(s) 628
BpuEI CTTGAG 1 cut(s) 149
BpuMI CCSGG 3 cut(s) 161, 913, 1288
Bsa29I ATCGAT 2 cut(s) 1325, 1364
BsaAI YACGTR 2 cut(s) 841, 953
BsaJI CCNNGG 2 cut(s) 1173, 1338
BsaXI ACNNNNNCTCC 2 cut(s) 8, 38
Bsc4I CCNNNNNNNGG 3 cut(s) 167, 236, 799
Bse1I ACTGG 3 cut(s) 698, 977, 1317
Bse3DI GCAATG 1 cut(s) 55
BseBI CCWGG 1 cut(s) 38
BseCI ATCGAT 2 cut(s) 1325, 1364
BseDI CCNNGG 2 cut(s) 1173, 1338
BseGI GGATG 3 cut(s) 309, 1221, 1381
BseLI CCNNNNNNNGG 3 cut(s) 167, 236, 799
BseMI GCAATG 1 cut(s) 55
BseMII CTCAG 2 cut(s) 1139, 1214
BseNI ACTGG 3 cut(s) 698, 977, 1317
BseRI GAGGAG 3 cut(s) 1296, 1355, 1358
BseSI GKGCMC 1 cut(s) 1036
BseXI GCAGC 1 cut(s) 988
BseYI CCCAGC 1 cut(s) 1225
BsgI GTGCAG 2 cut(s) 207, 578
BshFI GGCC 4 cut(s) 159, 328, 540, 916
BshVI ATCGAT 2 cut(s) 1325, 1364
BsiHKAI GWGCWC 1 cut(s) 1036
BsiSI CCGG 3 cut(s) 161, 912, 1288
BslFI GGGAC 3 cut(s) 188, 840, 1074
BslI CCNNNNNNNGG 3 cut(s) 167, 236, 799
BsmAI GTCTC 2 cut(s) 794, 1152
BsmFI GGGAC 3 cut(s) 188, 840, 1074
BsnI GGCC 4 cut(s) 159, 328, 540, 916
Bsp1286I GDGCHC 3 cut(s) 1036, 1173, 1288
Bsp143I GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
Bsp1720I GCTNAGC 1 cut(s) 628
BspACI CCGC 2 cut(s) 27, 210
BspANI GGCC 4 cut(s) 159, 328, 540, 916
BspCNI CTCAG 2 cut(s) 1138, 1213
BspDI ATCGAT 2 cut(s) 1325, 1364
BspLI GGNNCC 1 cut(s) 1285
BspMAI CTGCAG 1 cut(s) 649
BspMI ACCTGC 1 cut(s) 188
BspPI GGATC 3 cut(s) 517, 983, 1360
BspQI GCTCTTC 1 cut(s) 557
BspTI CTTAAG 2 cut(s) 11, 830
BsrDI GCAATG 1 cut(s) 55
BsrI ACTGG 3 cut(s) 698, 977, 1317
BssECI CCNNGG 2 cut(s) 1173, 1338
BssMI GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
BssSI CACGAG 1 cut(s) 1166
BssT1I CCWWGG 1 cut(s) 1173
Bst2BI CACGAG 1 cut(s) 1166
Bst2UI CCWGG 1 cut(s) 38
Bst4CI ACNGT 5 cut(s) 104, 295, 323, 865, 886
Bst6I CTCTTC 1 cut(s) 557
BstAFI CTTAAG 2 cut(s) 11, 830
BstAPI GCANNNNNTGC 1 cut(s) 194
BstBAI YACGTR 2 cut(s) 841, 953
BstC8I GCNNGC 3 cut(s) 139, 396, 459
BstDEI CTNAG 5 cut(s) 628, 722, 1125, 1193, 1200
BstF5I GGATG 3 cut(s) 309, 1221, 1381
BstHHI GCGC 1 cut(s) 143
BstKTI GATC 8 cut(s) 83, 525, 664, 978, 1030, 1199, 1329, 1368
BstMAI GTCTC 2 cut(s) 794, 1152
BstMBI GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
BstMWI GCNNNNNNNGC 4 cut(s) 194, 887, 1010, 1088
BstNI CCWGG 1 cut(s) 38
BstSCI CCNGG 4 cut(s) 36, 159, 911, 1286
BstSFI CTRYAG 2 cut(s) 645, 885
BstSLI GKGCMC 1 cut(s) 1036
BstSNI TACGTA 1 cut(s) 953
BstV1I GCAGC 1 cut(s) 988
BstV2I GAAGAC 2 cut(s) 1181, 1300
BstX2I RGATCY 1 cut(s) 1196
BstYI RGATCY 1 cut(s) 1196
Bsu15I ATCGAT 2 cut(s) 1325, 1364
BsuI GTATCC 1 cut(s) 830
BsuRI GGCC 4 cut(s) 159, 328, 540, 916
BsuTUI ATCGAT 2 cut(s) 1325, 1364
BtsCI GGATG 3 cut(s) 309, 1221, 1381
BtsIMutI CAGTG 1 cut(s) 291
BveI ACCTGC 1 cut(s) 188
Cac8I GCNNGC 3 cut(s) 139, 396, 459
CfoI GCGC 1 cut(s) 143
Cfr13I GGNCC 5 cut(s) 158, 327, 914, 946, 1335
ClaI ATCGAT 2 cut(s) 1325, 1364
CseI GACGC 1 cut(s) 644
Csp6I GTAC 2 cut(s) 291, 319
CviAII CATG 4 cut(s) 194, 568, 586, 752
CviQI GTAC 2 cut(s) 291, 319
DdeI CTNAG 5 cut(s) 628, 722, 1125, 1193, 1200
DpnI GATC 8 cut(s) 82, 524, 663, 977, 1029, 1198, 1328, 1367
DpnII GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
DraI TTTAAA 1 cut(s) 505
Eam1104I CTCTTC 1 cut(s) 557
EarI CTCTTC 1 cut(s) 557
Eco105I TACGTA 1 cut(s) 953
Eco130I CCWWGG 1 cut(s) 1173
Eco24I GRGCYC 2 cut(s) 1173, 1288
Eco47I GGWCC 2 cut(s) 946, 1335
Eco57I CTGAAG 3 cut(s) 267, 375, 489
EcoO109I RGGNCCY 1 cut(s) 946
EcoRII CCWGG 1 cut(s) 36
EcoT14I CCWWGG 1 cut(s) 1173
EcoT22I ATGCAT 1 cut(s) 1015
EcoT38I GRGCYC 2 cut(s) 1173, 1288
ErhI CCWWGG 1 cut(s) 1173
FaeI CATG 4 cut(s) 197, 571, 589, 755
FalI AAGNNNNNCTT 4 cut(s) 111, 143, 130, 162
FaqI GGGAC 3 cut(s) 188, 840, 1074
FatI CATG 4 cut(s) 193, 567, 585, 751
Fnu4HI GCNGC 1 cut(s) 1002
FokI GGATG 3 cut(s) 316, 1208, 1388
FriOI GRGCYC 2 cut(s) 1173, 1288
Fsp4HI GCNGC 1 cut(s) 1002
FspBI CTAG 4 cut(s) 108, 377, 893, 1052
GlaI GCGC 1 cut(s) 142
GluI GCNGC 1 cut(s) 1002
GsaI CCCAGC 1 cut(s) 1229
GsuI CTGGAG 1 cut(s) 1334
HaeIII GGCC 4 cut(s) 159, 328, 540, 916
HapII CCGG 3 cut(s) 161, 912, 1288
HgaI GACGC 1 cut(s) 644
HhaI GCGC 1 cut(s) 143
Hin1II CATG 4 cut(s) 197, 571, 589, 755
Hin6I GCGC 1 cut(s) 141
HinP1I GCGC 1 cut(s) 141
HincII GTYRAC 2 cut(s) 207, 1206
HindII GTYRAC 2 cut(s) 207, 1206
HindIII AAGCTT 2 cut(s) 125, 1393
HinfI GANTC 5 cut(s) 164, 226, 574, 692, 1322
HpaI GTTAAC 1 cut(s) 1206
HpaII CCGG 3 cut(s) 161, 912, 1288
HphI GGTGA 3 cut(s) 77, 687, 1037
Hpy166II GTNNAC 3 cut(s) 207, 1034, 1206
Hpy188I TCNGA 7 cut(s) 225, 527, 613, 691, 1042, 1128, 1370
Hpy188III TCNNGA 4 cut(s) 168, 659, 758, 1151
Hpy8I GTNNAC 3 cut(s) 207, 1034, 1206
HpyAV CCTTC 6 cut(s) 149, 241, 701, 979, 1051, 1312
HpyCH4III ACNGT 5 cut(s) 104, 295, 323, 865, 886
HpyCH4IV ACGT 4 cut(s) 840, 952, 1036, 1186
HpyF10VI GCNNNNNNNGC 4 cut(s) 194, 887, 1010, 1088
HpyF3I CTNAG 5 cut(s) 628, 722, 1125, 1193, 1200
HpySE526I ACGT 4 cut(s) 840, 952, 1036, 1186
Hsp92II CATG 4 cut(s) 197, 571, 589, 755
HspAI GCGC 1 cut(s) 141
KspAI GTTAAC 1 cut(s) 1206
Kzo9I GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
LguI GCTCTTC 1 cut(s) 557
LmnI GCTCC 1 cut(s) 1283
Lsp1109I GCAGC 1 cut(s) 988
LweI GCATC 4 cut(s) 344, 454, 602, 1230
MaeI CTAG 4 cut(s) 108, 377, 893, 1052
MaeII ACGT 4 cut(s) 840, 952, 1036, 1186
MalI GATC 8 cut(s) 82, 524, 663, 977, 1029, 1198, 1328, 1367
MboI GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
MfeI CAATTG 1 cut(s) 342
MflI RGATCY 1 cut(s) 1196
MhlI GDGCHC 3 cut(s) 1036, 1173, 1288
MluCI AATT 4 cut(s) 69, 342, 473, 1380
Mph1103I ATGCAT 1 cut(s) 1015
MroXI GAANNNNTTC 2 cut(s) 230, 474
MslI CAYNNNNRTG 1 cut(s) 198
MspCI CTTAAG 2 cut(s) 11, 830
MspI CCGG 3 cut(s) 161, 912, 1288
MspR9I CCNGG 4 cut(s) 38, 161, 913, 1288
MunI CAATTG 1 cut(s) 342
MvaI CCWGG 1 cut(s) 38
MwoI GCNNNNNNNGC 4 cut(s) 194, 887, 1010, 1088
NciI CCSGG 3 cut(s) 161, 913, 1288
NdeII GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
NlaIII CATG 4 cut(s) 197, 571, 589, 755
NlaIV GGNNCC 1 cut(s) 1285
NsiI ATGCAT 1 cut(s) 1015
PaqCI CACCTGC 1 cut(s) 188
PciSI GCTCTTC 1 cut(s) 557
PdmI GAANNNNTTC 2 cut(s) 230, 474
PfeI GAWTC 5 cut(s) 164, 226, 574, 692, 1322
PkrI GCNGC 1 cut(s) 1003
Ppu21I YACGTR 2 cut(s) 841, 953
PpuMI RGGWCCY 1 cut(s) 946
Psp5II RGGWCCY 1 cut(s) 946
Psp6I CCWGG 1 cut(s) 36
PspFI CCCAGC 1 cut(s) 1225
PspGI CCWGG 1 cut(s) 36
PspN4I GGNNCC 1 cut(s) 1285
PspPI GGNCC 5 cut(s) 158, 327, 914, 946, 1335
PspPPI RGGWCCY 1 cut(s) 946
PstI CTGCAG 1 cut(s) 649
PsuI RGATCY 1 cut(s) 1196
RsaI GTAC 2 cut(s) 292, 320
RsaNI GTAC 2 cut(s) 291, 319
RseI CAYNNNNRTG 1 cut(s) 198
SapI GCTCTTC 1 cut(s) 557
SatI GCNGC 1 cut(s) 1002
Sau3AI GATC 8 cut(s) 80, 522, 661, 975, 1027, 1196, 1326, 1365
Sau96I GGNCC 5 cut(s) 158, 327, 914, 946, 1335
ScrFI CCNGG 4 cut(s) 38, 161, 913, 1288
SduI GDGCHC 3 cut(s) 1036, 1173, 1288
SfaNI GCATC 4 cut(s) 344, 454, 602, 1230
SfcI CTRYAG 2 cut(s) 645, 885
SinI GGWCC 2 cut(s) 946, 1335
SmiMI CAYNNNNRTG 1 cut(s) 198
SmlI CTYRAG 4 cut(s) 11, 128, 830, 1396
SmoI CTYRAG 4 cut(s) 11, 128, 830, 1396
SnaBI TACGTA 1 cut(s) 953
Sse9I AATT 4 cut(s) 69, 342, 473, 1380
SsiI CCGC 2 cut(s) 27, 210
SspMI CTAG 4 cut(s) 108, 377, 893, 1052
StyD4I CCNGG 4 cut(s) 36, 159, 911, 1286
StyI CCWWGG 1 cut(s) 1173
TaaI ACNGT 5 cut(s) 104, 295, 323, 865, 886
TaiI ACGT 4 cut(s) 843, 955, 1039, 1189
TaqI TCGA 3 cut(s) 797, 1325, 1364
TaqII GACCGA 1 cut(s) 1352
TasI AATT 4 cut(s) 69, 342, 473, 1380
TatI WGTACW 1 cut(s) 318
TfiI GAWTC 5 cut(s) 164, 226, 574, 692, 1322
TscAI CASTG 1 cut(s) 291
TseI GCWGC 1 cut(s) 1001
TspDTI ATGAA 7 cut(s) 182, 530, 574, 740, 998, 1281, 1392
TspRI CASTG 1 cut(s) 291
Vha464I CTTAAG 2 cut(s) 11, 830
VneI GTGCAC 1 cut(s) 1032
VpaK11BI GGWCC 2 cut(s) 946, 1335
XapI RAATTY 2 cut(s) 69, 473
XmnI GAANNNNTTC 2 cut(s) 230, 474
XspI CTAG 4 cut(s) 108, 377, 893, 1052
Zsp2I ATGCAT 1 cut(s) 1015
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.