Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002624

Physical Location & Seq

Genomic Coordinates Reverse (-)

28324507 .. 28333597

Gene Structure 9091 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG237400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGTGTGGAACAAGATGGTGCATCACGCAAGACAATTGTAGAAAGACCGAAAGAGAAAGAGAAGCTCTCAAGGCCTCAGTCATCTTCTCTTCTCCAGAACACATAAAAATGGAAGCGTCTACCTTACCTGATGCAGGCCTTGGTAAAGAGAAAAAGGACTTGACATATTTGCTTGATGTGTTTAGCTCTAGTTGTTCTCTTGAGGACATTGCCTCTGCTTATGTCAAGGCTAGGTACAATGTAAAAATGGCTGGTGAAATTCTTTGCACGTCACATTTATGTTCCTCAGATGGTGCTAGTTCATCAAAGGCTATATTTGAGGGTGCAAGTGATACATTTTCAGATGCCCTGTCACCTCAAGTGCAGTGTACAAGCGTAGTTCCTGCAGCACTGTCATCTGTCAGCATTCTTCAGAAGACCTCTAATGGAGTTGGCAATACCAGAGCATCAAAGTCAAAAAGACCTCCTCTATCAGTGGGTACCGTTTCTGGTGTGATAGGAAAAGACTACAGTACGCAGAAGACATCAACAAATGAATCTGCTGAAATGCCAAAACCATTAAAATTAGAATTGAAAGAAATGCCTTTCTCTGATTTATCTAGTGAAGAAGTCCAATCAAGCATGACAGCTAACAACAGTAAGATGCACGCCGATATTGAAGAATTTCTGTTTGAAATGCTTGGAGATGGCTTTAAACTTAATATGAATGTGATCAAAGAAGTTCTCAGCTTTTGTGGATATGATAAGGAAAAGAGCATGGAGAAACTTCTTTTTATGTCAGCATCAACCTTGGAAAATTCTGATGATCTTGTTAGTTTAGAAAGTTCAAAGTCTACAGAGAAGTGTTCAGATCAACATTCTGCTCATAGTAATGGATCTAGAAATGCAAGAAATCCAATAGAAGGTGGGTCTACTGACTCTGCTCTTGAGAAAGAGTTATTTGAAGCATTGTTTGGTGTTCCTGAAAGATTGGAAGAAGCACCGAAAGTAAATCTCCCATCAAGGGGACTGAAGAGGAATGGATATAGGGGATTTCATGGTAATTTGGTGGTTGAACCTTTTAGAGACACAATTATAGAAAGCAAAATTGCGACAGTGGTACGACGAGAAGTCACCAGGGCAGAATCTGAGGATGTTGAGAATAGCTATGAGGTTCTACGTAATTCTGTGAAGGAATATTGGATTACAATGAAGGAGTATTACAAAACTGCTTTAGAAGCATTTTCTGAGGGTGATCATGTACGTGCAGATAAATTTTTTGAGAAGGGCCATTTCTTTTGCAGAAAGGCACGGGAAGTAGATGACAAATCCACTGAAAAACTTCTTCAGACTAGAGATGATGATGATTCTGTGTCTCTTGACTTGCATGATCATGAACCCAAGGAAGCTATACGTACTCTAAGGTTTGAATTAACCTATCTCTCCGGCATGCCAGCTTTCAAGTACCTTAGGATCATAGTGGGAAGCAATGATGAAGATACCACTCGAGGAGCGCGGAGAAGACTGATTATAAAGCAACTGGAGAAGGAATCGATCAAATGGACTGAGGAGGAGAATGGGCAGATAATATTGATCCGACTCGATGTGATTGACCCGAAACGCTTGAGCTTCTCAAAAAAATCGAATGAAAGAATCCAGAGCTCACCTTCATTTGGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043331 GO:0044237 GO:0044238 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:1901360 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1771

Protein Analysis

553

Amino Acids

61.85

Weight (kDa)

5.64

Isoelectric Point (pI)

44.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_At5g58720	PF24767	49 - 90	5e-07	At5g58720 UBA-like domain
DUF1771	PF08590	383 - 445	4.5e-11	Domain of unknown function (DUF1771)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15390 AT3G15390 AT3G15390
fragaria_vesca	FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430
malus_domestica	MD00G1089400.v1.1
prunus_persica	Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1
pyrus_communis	pycom11g21510
rosa_chinensis	RchiOBHm_Chr5g0034321
rosa_laevigata	RLG00000033540
rosa_multiflora	Rmu_sc0000062.1_g000019
rosa_roxburghii	Rroxscaffold_1G00045920 Rroxscaffold_1G00045950
rosa_rugosa	Rorug05G0145300 Rorug05G0145300
rosa_samantha	Rh5AG236900 Rh5BG237400 Rh5CG267200 Rh5DG244900
rosa_wichuraiana	Rw0G022190 Rw5G021270 Rw5G021660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1511
Acc65I	GGTACC	1 cut(s)	479
AccB1I	GGYRCC	1 cut(s)	479
AccI	GTMKAC	3 cut(s)	119, 833, 911
AccII	CGCG	1 cut(s)	1495
AciI	CCGC	1 cut(s)	1495
AclWI	GGATC	3 cut(s)	883, 1460, 1567
AcsI	RAATTY	4 cut(s)	258, 662, 796, 1253
AcuI	CTGAAG	3 cut(s)	395, 1031, 1310
AfaI	GTAC	8 cut(s)	236, 370, 481, 514, 1101, 1242, 1396, 1445
AfiI	CCNNNNNNNGG	5 cut(s)	134, 902, 1003, 1004, 1652
AgsI	TTSAA	8 cut(s)	574, 659, 674, 828, 944, 1055, 1409, 1441
AhdI	GACNNNNNGTC	1 cut(s)	1109
AjiI	CACGTC	1 cut(s)	270
AjnI	CCWGG	1 cut(s)	1115
AjuI	GAANNNNNNNTTGG	2 cut(s)	936, 968
AluBI	AGCT	9 cut(s)	65, 186, 629, 729, 1146, 1388, 1436, 1608, 1641
AluI	AGCT	9 cut(s)	65, 186, 629, 729, 1146, 1388, 1436, 1608, 1641
Alw21I	GWGCWC	1 cut(s)	1643
Alw26I	GTCTC	2 cut(s)	1059, 1359
AlwI	GGATC	3 cut(s)	883, 1460, 1567
AlwNI	CAGNNNCTG	1 cut(s)	1127
Ama87I	CYCGRG	1 cut(s)	1485
AoxI	GGCC	3 cut(s)	72, 136, 1267
ApeKI	GCWGC	1 cut(s)	386
ApoI	RAATTY	4 cut(s)	258, 662, 796, 1253
Asp700I	GAANNNNTTC	2 cut(s)	663, 1320
Asp718I	GGTACC	1 cut(s)	479
AspLEI	GCGC	1 cut(s)	1495
AspS9I	GGNCC	1 cut(s)	1267
AsuHPI	GGTGA	5 cut(s)	266, 345, 1105, 1244, 1635
AvaI	CYCGRG	1 cut(s)	1485
AxyI	CCTNAGG	1 cut(s)	1448
BanI	GGYRCC	1 cut(s)	479
BanII	GRGCYC	1 cut(s)	1643
BarI	GAAGNNNNNNTAC	2 cut(s)	1184, 1216
BbsI	GAAGAC	3 cut(s)	422, 527, 1507
Bbv12I	GWGCWC	1 cut(s)	1643
BbvI	GCAGC	1 cut(s)	398
BccI	CCATC	4 cut(s)	9, 284, 680, 1006
BciT130I	CCWGG	1 cut(s)	1117
BclI	TGATCA	3 cut(s)	711, 1234, 1369
BcoDI	GTCTC	2 cut(s)	1059, 1359
BfaI	CTAG	6 cut(s)	189, 231, 297, 600, 879, 1332
BfmI	CTRYAG	3 cut(s)	384, 508, 834
BisI	GCNGC	1 cut(s)	387
BlsI	GCNGC	1 cut(s)	388
Bme1390I	CCNGG	1 cut(s)	1117
BmeRI	GACNNNNNGTC	1 cut(s)	1109
BmeT110I	CYCGRG	1 cut(s)	1485
BmgBI	CACGTC	1 cut(s)	270
BmgT120I	GGNCC	1 cut(s)	1267
BmiI	GGNNCC	1 cut(s)	481
BmrFI	CCNGG	1 cut(s)	1117
BmsI	GCATC	6 cut(s)	30, 121, 334, 455, 633, 791
BpiI	GAAGAC	3 cut(s)	422, 527, 1507
BplI	GAGNNNNNCTC	2 cut(s)	51, 83
BpmI	CTGGAG	2 cut(s)	78, 1541
BpuEI	CTTGAG	5 cut(s)	53, 221, 342, 947, 1624
Bsa29I	ATCGAT	1 cut(s)	1532
BsaAI	YACGTR	3 cut(s)	1160, 1244, 1394
BsaJI	CCNNGG	4 cut(s)	139, 789, 1116, 1380
Bsc4I	CCNNNNNNNGG	5 cut(s)	134, 902, 1003, 1004, 1652
Bse1I	ACTGG	1 cut(s)	1524
Bse21I	CCTNAGG	1 cut(s)	1448
Bse3DI	GCAATG	2 cut(s)	207, 1474
BseBI	CCWGG	1 cut(s)	1117
BseCI	ATCGAT	1 cut(s)	1532
BseDI	CCNNGG	4 cut(s)	139, 789, 1116, 1380
BseGI	GGATG	1 cut(s)	1138
BseLI	CCNNNNNNNGG	5 cut(s)	134, 902, 1003, 1004, 1652
BseMI	GCAATG	2 cut(s)	207, 1474
BseMII	CTCAG	6 cut(s)	90, 300, 739, 1119, 1218, 1536
BseNI	ACTGG	1 cut(s)	1524
BseRI	GAGGAG	4 cut(s)	456, 1503, 1562, 1565
BseXI	GCAGC	1 cut(s)	398
BsgI	GTGCAG	2 cut(s)	383, 1266
Bsh1236I	CGCG	1 cut(s)	1495
BshFI	GGCC	3 cut(s)	74, 138, 1269
BshNI	GGYRCC	1 cut(s)	479
BshVI	ATCGAT	1 cut(s)	1532
BsiHKAI	GWGCWC	1 cut(s)	1643
BsiHKCI	CYCGRG	1 cut(s)	1485
BsiSI	CCGG	1 cut(s)	1425
BslFI	GGGAC	1 cut(s)	1020
BslI	CCNNNNNNNGG	5 cut(s)	134, 902, 1003, 1004, 1652
BsmAI	GTCTC	2 cut(s)	1059, 1359
BsmFI	GGGAC	1 cut(s)	1020
BsmI	GAATGC	1 cut(s)	405
BsnI	GGCC	3 cut(s)	74, 138, 1269
BsoBI	CYCGRG	1 cut(s)	1485
Bsp1286I	GDGCHC	1 cut(s)	1643
Bsp1407I	TGTACA	1 cut(s)	368
Bsp143I	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
BspACI	CCGC	1 cut(s)	1495
BspANI	GGCC	3 cut(s)	74, 138, 1269
BspCNI	CTCAG	6 cut(s)	89, 299, 738, 1120, 1219, 1537
BspDI	ATCGAT	1 cut(s)	1532
BspFNI	CGCG	1 cut(s)	1495
BspHI	TCATGA	1 cut(s)	1372
BspLI	GGNNCC	1 cut(s)	481
BspMAI	CTGCAG	1 cut(s)	388
BspPI	GGATC	3 cut(s)	883, 1460, 1567
BspT107I	GGYRCC	1 cut(s)	479
BsrDI	GCAATG	2 cut(s)	207, 1474
BsrGI	TGTACA	1 cut(s)	368
BsrI	ACTGG	1 cut(s)	1524
BssECI	CCNNGG	4 cut(s)	139, 789, 1116, 1380
BssMI	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
BssT1I	CCWWGG	3 cut(s)	139, 789, 1380
Bst2UI	CCWGG	1 cut(s)	1117
Bst4CI	ACNGT	5 cut(s)	393, 484, 512, 638, 1096
Bst6I	CTCTTC	2 cut(s)	94, 1007
BstAUI	TGTACA	1 cut(s)	368
BstBAI	YACGTR	3 cut(s)	1160, 1244, 1394
BstC8I	GCNNGC	4 cut(s)	136, 648, 1430, 1434
BstDEI	CTNAG	8 cut(s)	76, 286, 725, 1128, 1227, 1400, 1448, 1545
BstENI	CCTNNNNNAGG	1 cut(s)	132
BstF5I	GGATG	1 cut(s)	1138
BstFNI	CGCG	1 cut(s)	1495
BstHHI	GCGC	1 cut(s)	1495
BstKTI	GATC	9 cut(s)	714, 808, 853, 878, 1237, 1372, 1455, 1536, 1575
BstMAI	GTCTC	2 cut(s)	1059, 1359
BstMBI	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
BstMWI	GCNNNNNNNGC	2 cut(s)	71, 1217
BstNI	CCWGG	1 cut(s)	1117
BstNSI	RCATGY	1 cut(s)	1432
BstSCI	CCNGG	1 cut(s)	1115
BstSFI	CTRYAG	3 cut(s)	384, 508, 834
BstSNI	TACGTA	2 cut(s)	1160, 1394
BstUI	CGCG	1 cut(s)	1495
BstV1I	GCAGC	1 cut(s)	398
BstV2I	GAAGAC	3 cut(s)	422, 527, 1507
BstX2I	RGATCY	1 cut(s)	875
BstYI	RGATCY	1 cut(s)	875
Bsu15I	ATCGAT	1 cut(s)	1532
Bsu36I	CCTNAGG	1 cut(s)	1448
BsuRI	GGCC	3 cut(s)	74, 138, 1269
BsuTUI	ATCGAT	1 cut(s)	1532
BtrI	CACGTC	1 cut(s)	270
BtsCI	GGATG	1 cut(s)	1138
BtsI	GCAGTG	1 cut(s)	371
BtsIMutI	CAGTG	5 cut(s)	371, 389, 480, 1101, 1311
Cac8I	GCNNGC	4 cut(s)	136, 648, 1430, 1434
CaiI	CAGNNNCTG	1 cut(s)	1127
CciI	TCATGA	1 cut(s)	1372
CfoI	GCGC	1 cut(s)	1495
Cfr13I	GGNCC	1 cut(s)	1267
ClaI	ATCGAT	1 cut(s)	1532
CseI	GACGC	1 cut(s)	105
Csp6I	GTAC	8 cut(s)	235, 369, 480, 513, 1100, 1241, 1395, 1444
CviAII	CATG	7 cut(s)	622, 757, 1037, 1238, 1367, 1373, 1429
CviQI	GTAC	8 cut(s)	235, 369, 480, 513, 1100, 1241, 1395, 1444
DdeI	CTNAG	8 cut(s)	76, 286, 725, 1128, 1227, 1400, 1448, 1545
DpnI	GATC	9 cut(s)	713, 807, 852, 877, 1236, 1371, 1454, 1535, 1574
DpnII	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
DraI	TTTAAA	1 cut(s)	694
DriI	GACNNNNNGTC	1 cut(s)	1109
Eam1104I	CTCTTC	2 cut(s)	94, 1007
Eam1105I	GACNNNNNGTC	1 cut(s)	1109
EarI	CTCTTC	2 cut(s)	94, 1007
Ecl136II	GAGCTC	1 cut(s)	1641
Eco105I	TACGTA	2 cut(s)	1160, 1394
Eco130I	CCWWGG	3 cut(s)	139, 789, 1380
Eco147I	AGGCCT	2 cut(s)	74, 138
Eco24I	GRGCYC	1 cut(s)	1643
Eco53kI	GAGCTC	1 cut(s)	1641
Eco57I	CTGAAG	3 cut(s)	395, 1031, 1310
Eco81I	CCTNAGG	1 cut(s)	1448
Eco88I	CYCGRG	1 cut(s)	1485
EcoICRI	GAGCTC	1 cut(s)	1641
EcoNI	CCTNNNNNAGG	1 cut(s)	132
EcoRII	CCWGG	1 cut(s)	1115
EcoT14I	CCWWGG	3 cut(s)	139, 789, 1380
EcoT38I	GRGCYC	1 cut(s)	1643
ErhI	CCWWGG	3 cut(s)	139, 789, 1380
FaeI	CATG	7 cut(s)	625, 760, 1040, 1241, 1370, 1376, 1432
FaqI	GGGAC	1 cut(s)	1020
FatI	CATG	7 cut(s)	621, 756, 1036, 1237, 1366, 1372, 1428
FbaI	TGATCA	3 cut(s)	711, 1234, 1369
FblI	GTMKAC	3 cut(s)	119, 833, 911
Fnu4HI	GCNGC	1 cut(s)	387
FokI	GGATG	1 cut(s)	1145
FriOI	GRGCYC	1 cut(s)	1643
Fsp4HI	GCNGC	1 cut(s)	387
FspBI	CTAG	6 cut(s)	189, 231, 297, 600, 879, 1332
GlaI	GCGC	1 cut(s)	1494
GluI	GCNGC	1 cut(s)	387
GsuI	CTGGAG	2 cut(s)	78, 1541
HaeIII	GGCC	3 cut(s)	74, 138, 1269
HapII	CCGG	1 cut(s)	1425
HgaI	GACGC	1 cut(s)	105
HhaI	GCGC	1 cut(s)	1495
Hin1II	CATG	7 cut(s)	625, 760, 1040, 1241, 1370, 1376, 1432
Hin6I	GCGC	1 cut(s)	1493
HinP1I	GCGC	1 cut(s)	1493
HinfI	GANTC	7 cut(s)	536, 917, 1124, 1346, 1529, 1578, 1632
HpaII	CCGG	1 cut(s)	1425
HphI	GGTGA	5 cut(s)	266, 345, 1105, 1244, 1635
Hpy166II	GTNNAC	4 cut(s)	120, 369, 834, 912
Hpy188III	TCNNGA	8 cut(s)	95, 200, 879, 926, 962, 1358, 1373, 1636
Hpy8I	GTNNAC	4 cut(s)	120, 369, 834, 912
Hpy99I	CGWCG	1 cut(s)	1107
HpyAV	CCTTC	6 cut(s)	896, 1165, 1186, 1258, 1519, 1656
HpyCH4III	ACNGT	5 cut(s)	393, 484, 512, 638, 1096
HpyCH4IV	ACGT	4 cut(s)	269, 1159, 1243, 1393
HpyF10VI	GCNNNNNNNGC	2 cut(s)	71, 1217
HpyF3I	CTNAG	8 cut(s)	76, 286, 725, 1128, 1227, 1400, 1448, 1545
HpySE526I	ACGT	4 cut(s)	269, 1159, 1243, 1393
Hsp92II	CATG	7 cut(s)	625, 760, 1040, 1241, 1370, 1376, 1432
HspAI	GCGC	1 cut(s)	1493
KpnI	GGTACC	1 cut(s)	483
Ksp22I	TGATCA	3 cut(s)	711, 1234, 1369
Kzo9I	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
LmnI	GCTCC	1 cut(s)	1490
Lsp1109I	GCAGC	1 cut(s)	398
LweI	GCATC	6 cut(s)	30, 121, 334, 455, 633, 791
MaeI	CTAG	6 cut(s)	189, 231, 297, 600, 879, 1332
MaeII	ACGT	4 cut(s)	269, 1159, 1243, 1393
MaeIII	GTNAC	3 cut(s)	270, 351, 1111
MalI	GATC	9 cut(s)	713, 807, 852, 877, 1236, 1371, 1454, 1535, 1574
MboI	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
MfeI	CAATTG	1 cut(s)	34
MflI	RGATCY	1 cut(s)	875
MhlI	GDGCHC	1 cut(s)	1643
MlyI	GAGTC	2 cut(s)	911, 1572
MmeI	TCCRAC	1 cut(s)	1600
MroXI	GAANNNNTTC	2 cut(s)	663, 1320
MseI	TTAA	4 cut(s)	560, 693, 699, 1412
MslI	CAYNNNNRTG	5 cut(s)	107, 277, 870, 1242, 1371
MspI	CCGG	1 cut(s)	1425
MspR9I	CCNGG	1 cut(s)	1117
MunI	CAATTG	1 cut(s)	34
Mva1269I	GAATGC	1 cut(s)	405
MvaI	CCWGG	1 cut(s)	1117
MvnI	CGCG	1 cut(s)	1495
MwoI	GCNNNNNNNGC	2 cut(s)	71, 1217
NdeII	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
NlaIII	CATG	7 cut(s)	625, 760, 1040, 1241, 1370, 1376, 1432
NlaIV	GGNNCC	1 cut(s)	481
NmuCI	GTSAC	3 cut(s)	270, 351, 1111
NspI	RCATGY	1 cut(s)	1432
PaeI	GCATGC	1 cut(s)	1432
PaeR7I	CTCGAG	1 cut(s)	1485
PagI	TCATGA	1 cut(s)	1372
PceI	AGGCCT	2 cut(s)	74, 138
PctI	GAATGC	1 cut(s)	405
PdmI	GAANNNNTTC	2 cut(s)	663, 1320
PfeI	GAWTC	5 cut(s)	536, 1124, 1346, 1529, 1632
PkrI	GCNGC	1 cut(s)	388
PleI	GAGTC	2 cut(s)	911, 1572
PpsI	GAGTC	2 cut(s)	911, 1572
Ppu21I	YACGTR	3 cut(s)	1160, 1244, 1394
PsiI	TTATAA	1 cut(s)	1511
Psp124BI	GAGCTC	1 cut(s)	1643
Psp6I	CCWGG	1 cut(s)	1115
PspGI	CCWGG	1 cut(s)	1115
PspN4I	GGNNCC	1 cut(s)	481
PspPI	GGNCC	1 cut(s)	1267
PspXI	VCTCGAGB	1 cut(s)	1485
PstI	CTGCAG	1 cut(s)	388
PstNI	CAGNNNCTG	1 cut(s)	1127
PsuI	RGATCY	1 cut(s)	875
RsaI	GTAC	8 cut(s)	236, 370, 481, 514, 1101, 1242, 1396, 1445
RsaNI	GTAC	8 cut(s)	235, 369, 480, 513, 1100, 1241, 1395, 1444
RseI	CAYNNNNRTG	5 cut(s)	107, 277, 870, 1242, 1371
SacI	GAGCTC	1 cut(s)	1643
SaqAI	TTAA	4 cut(s)	560, 693, 699, 1412
SatI	GCNGC	1 cut(s)	387
Sau3AI	GATC	9 cut(s)	711, 805, 850, 875, 1234, 1369, 1452, 1533, 1572
Sau96I	GGNCC	1 cut(s)	1267
SchI	GAGTC	2 cut(s)	911, 1572
ScrFI	CCNGG	1 cut(s)	1117
SduI	GDGCHC	1 cut(s)	1643
SfaNI	GCATC	6 cut(s)	30, 121, 334, 455, 633, 791
SfcI	CTRYAG	3 cut(s)	384, 508, 834
Sfr274I	CTCGAG	1 cut(s)	1485
SlaI	CTCGAG	1 cut(s)	1485
SmiMI	CAYNNNNRTG	5 cut(s)	107, 277, 870, 1242, 1371
SmlI	CTYRAG	6 cut(s)	68, 200, 357, 926, 1485, 1603
SmoI	CTYRAG	6 cut(s)	68, 200, 357, 926, 1485, 1603
SnaBI	TACGTA	2 cut(s)	1160, 1394
SphI	GCATGC	1 cut(s)	1432
SseBI	AGGCCT	2 cut(s)	74, 138
SsiI	CCGC	1 cut(s)	1495
SspI	AATATT	2 cut(s)	1178, 1569
SspMI	CTAG	6 cut(s)	189, 231, 297, 600, 879, 1332
SstI	GAGCTC	1 cut(s)	1643
StuI	AGGCCT	2 cut(s)	74, 138
StyD4I	CCNGG	1 cut(s)	1115
StyI	CCWWGG	3 cut(s)	139, 789, 1380
TaaI	ACNGT	5 cut(s)	393, 484, 512, 638, 1096
TaiI	ACGT	4 cut(s)	272, 1162, 1246, 1396
TaqI	TCGA	4 cut(s)	1486, 1532, 1581, 1622
TaqII	GACCGA	1 cut(s)	62
TatI	WGTACW	1 cut(s)	368
TfiI	GAWTC	5 cut(s)	536, 1124, 1346, 1529, 1632
Tru1I	TTAA	4 cut(s)	560, 693, 699, 1412
Tru9I	TTAA	4 cut(s)	560, 693, 699, 1412
TscAI	CASTG	5 cut(s)	371, 396, 480, 1101, 1318
TseFI	GTSAC	3 cut(s)	270, 351, 1111
TseI	GCWGC	1 cut(s)	386
Tsp45I	GTSAC	3 cut(s)	270, 351, 1111
TspDTI	ATGAA	9 cut(s)	291, 549, 719, 1025, 1205, 1389, 1488, 1638, 1641
TspRI	CASTG	5 cut(s)	371, 396, 480, 1101, 1318
XagI	CCTNNNNNAGG	1 cut(s)	132
XapI	RAATTY	4 cut(s)	258, 662, 796, 1253
XbaI	TCTAGA	1 cut(s)	878
XceI	RCATGY	1 cut(s)	1432
XhoI	CTCGAG	1 cut(s)	1485
XmiI	GTMKAC	3 cut(s)	119, 833, 911
XmnI	GAANNNNTTC	2 cut(s)	663, 1320
XspI	CTAG	6 cut(s)	189, 231, 297, 600, 879, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.