Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0002624

Physical Location & Seq

Genomic Coordinates Reverse (-)

28728810 .. 28738152

Gene Structure 9343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG236900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGCAAGCATCTACCTTACCTGATGCAGGCCTTGATAAAGAGAAAAAGGACTTGACATATTTGCTTGATGTGTTTAGCTCTAGTTGTTCTCTTGAGGACATTGCCTCTGCTTATGTCAAGGCTAGGCACAATGTAAAAATGGCTGGTGAAATTCTTTGCACGTCAAATTTATGTTCCTCAGATGGTGCTAGTGCATCAAAGGCTATATTTGAGGGTGCAAGTGATACATTCTCAGATGGCCTGTCACCTCAAGTGCAGTGTACAAGCGTAGTTCCTGCAGCACTGTCATCTGTCAGCATTCTTCAAAAGACCTCTAATGGAGTTGGCAATACCAGAGCATCAAAGTCAAAAAGACCTCCTCTATCAGTGGGTACCGTTTCTGGTGTGATAGGCAAAGACTACAGTAGGCAGAAGACATCAACAAATGAATCTGCTGAAATGCAGAAACCATTAAAATTAGAATTGAAAGAAATGCCTTTCTCTGATTTATCTAGTGAAGAAGTCCAATCAAGCATGACAGCTAACAACAGTAAGATGCACGCCGATATTGAAGAATTTCTGTTTGAAATGCTTGGAGATGGCTTTAAACTTAATATGAATGTGATCAAAGAAGTTCTCAGCTTTTGTGGATATGATAGGGAAAAGAGCATGGAGAAACTTCGTTTTATGTCAGCATCAACCTTGGAAAATTCTGATGATCTTGTTAGTTTAGAAAGTTCAAAGTCTACAGAGAAGTGTTCAGATCAACATTCTGCTCATAGTAATGGATCTAGAAATGCAAGAAATCCAATAGAAGGTGGGTCTACTGACTCTGCTCTTGAGAAAGAGTTATTTGAAGCATTGTTTGGTGTTCCTGAAAGATTGGAAGAAGCACCTAAAGTAAATCTCCCATCAAGGGGACTGAAGAGAAATGGATGTAGGGGATTTCATGGTAATTTGGTGGTTGAACCTTTTAGAGACACAATTATAGGAAACAAAATTGCGACAGTGGTACGACGAGAAGTCACCAGGGCAGAATCTGAGGATGTTGAGAATAGCTATGAGGTTCTACGTAATTCTGTGAAGGAATATTGGATTACAATGAAGGAGTATTACAAAACTGCTTTAGAAGCATTTTCTGACGGTGATCATGTACATGCAGATAAATTTTTCGAGAAGGGCCATTTCTTTTGCAGAAAGGCACGGGAAGCAGATGACAAATCCACTGAAAAACTTCTTCAGACTAGAGATGATGATGATTCTGTGTCTCTTGACTTGCATGATCATGAACCCAAGGAAGCTATACGTACTCTAAGGCTTGAATTAACCTATCTCTCTGGCATGCCAGCTTTCAAGTACCTTAGGATCATAGTGGGAAGCAATGATGAAGATACCACTCGAGGAGCGCGGAGAAGACTGATTATAAAGCAACTGGAGAAGGAATCGATCAAATGGACTGAGGAGGAGAATGGGCAGATAATATTGATCCGACTCGATGTGATTGACCCGAAACGCTTGAGCTTCTCAAAAAAATCGAATGAAAGAATCCAGAGCTCACCTTCATTTGGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043331 GO:0044237 GO:0044238 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:1901360 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1771

Protein Analysis

517

Amino Acids

57.58

Weight (kDa)

5.61

Isoelectric Point (pI)

42.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_At5g58720	PF24767	12 - 54	4.3e-07	At5g58720 UBA-like domain
DUF1771	PF08590	347 - 409	2.9e-11	Domain of unknown function (DUF1771)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15390 AT3G15390 AT3G15390
fragaria_vesca	FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430
malus_domestica	MD00G1089400.v1.1
prunus_persica	Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1
pyrus_communis	pycom11g21510
rosa_chinensis	RchiOBHm_Chr5g0034321
rosa_laevigata	RLG00000033540
rosa_multiflora	Rmu_sc0000062.1_g000019
rosa_roxburghii	Rroxscaffold_1G00045920 Rroxscaffold_1G00045950
rosa_rugosa	Rorug05G0145300 Rorug05G0145300
rosa_samantha	Rh5AG236900 Rh5BG237400 Rh5CG267200 Rh5DG244900
rosa_wichuraiana	Rw0G022190 Rw5G021270 Rw5G021660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1403
Acc65I	GGTACC	1 cut(s)	371
AccB1I	GGYRCC	1 cut(s)	371
AccI	GTMKAC	2 cut(s)	725, 803
AccII	CGCG	1 cut(s)	1387
AciI	CCGC	1 cut(s)	1387
AclWI	GGATC	3 cut(s)	775, 1352, 1459
AcsI	RAATTY	5 cut(s)	150, 166, 554, 688, 1145
AcuI	CTGAAG	2 cut(s)	923, 1202
AfaI	GTAC	6 cut(s)	262, 373, 993, 1134, 1288, 1337
AfiI	CCNNNNNNNGG	5 cut(s)	26, 794, 895, 896, 1544
AgsI	TTSAA	9 cut(s)	305, 466, 551, 566, 720, 836, 947, 1301, 1333
AhdI	GACNNNNNGTC	1 cut(s)	1001
AjiI	CACGTC	1 cut(s)	162
AjnI	CCWGG	1 cut(s)	1007
AjuI	GAANNNNNNNTTGG	2 cut(s)	828, 860
AluBI	AGCT	8 cut(s)	78, 521, 621, 1038, 1280, 1328, 1500, 1533
AluI	AGCT	8 cut(s)	78, 521, 621, 1038, 1280, 1328, 1500, 1533
Alw21I	GWGCWC	1 cut(s)	1535
Alw26I	GTCTC	2 cut(s)	951, 1251
AlwI	GGATC	3 cut(s)	775, 1352, 1459
AlwNI	CAGNNNCTG	1 cut(s)	1019
Ama87I	CYCGRG	1 cut(s)	1377
AoxI	GGCC	3 cut(s)	28, 238, 1159
ApeKI	GCWGC	1 cut(s)	278
ApoI	RAATTY	5 cut(s)	150, 166, 554, 688, 1145
Asp700I	GAANNNNTTC	2 cut(s)	555, 1212
Asp718I	GGTACC	1 cut(s)	371
AspLEI	GCGC	1 cut(s)	1387
AspS9I	GGNCC	1 cut(s)	1159
AsuHPI	GGTGA	5 cut(s)	158, 237, 997, 1136, 1527
AvaI	CYCGRG	1 cut(s)	1377
AxyI	CCTNAGG	1 cut(s)	1340
BanI	GGYRCC	1 cut(s)	371
BanII	GRGCYC	1 cut(s)	1535
BarI	GAAGNNNNNNTAC	2 cut(s)	1076, 1108
BbsI	GAAGAC	2 cut(s)	419, 1399
Bbv12I	GWGCWC	1 cut(s)	1535
BbvI	GCAGC	1 cut(s)	290
BccI	CCATC	4 cut(s)	176, 230, 572, 898
BciT130I	CCWGG	1 cut(s)	1009
BclI	TGATCA	3 cut(s)	603, 1126, 1261
BcoDI	GTCTC	2 cut(s)	951, 1251
BfaI	CTAG	6 cut(s)	81, 123, 189, 492, 771, 1224
BfmI	CTRYAG	3 cut(s)	276, 400, 726
BisI	GCNGC	1 cut(s)	279
BlsI	GCNGC	1 cut(s)	280
Bme1390I	CCNGG	1 cut(s)	1009
BmeRI	GACNNNNNGTC	1 cut(s)	1001
BmeT110I	CYCGRG	1 cut(s)	1377
BmgBI	CACGTC	1 cut(s)	162
BmgT120I	GGNCC	1 cut(s)	1159
BmiI	GGNNCC	1 cut(s)	373
BmrFI	CCNGG	1 cut(s)	1009
BmsI	GCATC	6 cut(s)	13, 17, 203, 347, 525, 683
BpiI	GAAGAC	2 cut(s)	419, 1399
BpmI	CTGGAG	1 cut(s)	1433
BpuEI	CTTGAG	4 cut(s)	113, 234, 839, 1516
Bsa29I	ATCGAT	1 cut(s)	1424
BsaAI	YACGTR	2 cut(s)	1052, 1286
BsaJI	CCNNGG	3 cut(s)	681, 1008, 1272
Bsc4I	CCNNNNNNNGG	5 cut(s)	26, 794, 895, 896, 1544
Bse1I	ACTGG	1 cut(s)	1416
Bse21I	CCTNAGG	1 cut(s)	1340
Bse3DI	GCAATG	2 cut(s)	99, 1366
BseBI	CCWGG	1 cut(s)	1009
BseCI	ATCGAT	1 cut(s)	1424
BseDI	CCNNGG	3 cut(s)	681, 1008, 1272
BseGI	GGATG	2 cut(s)	920, 1030
BseLI	CCNNNNNNNGG	5 cut(s)	26, 794, 895, 896, 1544
BseMI	GCAATG	2 cut(s)	99, 1366
BseMII	CTCAG	5 cut(s)	192, 246, 631, 1011, 1428
BseNI	ACTGG	1 cut(s)	1416
BseRI	GAGGAG	4 cut(s)	348, 1395, 1454, 1457
BseXI	GCAGC	1 cut(s)	290
BsgI	GTGCAG	1 cut(s)	275
Bsh1236I	CGCG	1 cut(s)	1387
BshFI	GGCC	3 cut(s)	30, 240, 1161
BshNI	GGYRCC	1 cut(s)	371
BshVI	ATCGAT	1 cut(s)	1424
BsiHKAI	GWGCWC	1 cut(s)	1535
BsiHKCI	CYCGRG	1 cut(s)	1377
BslFI	GGGAC	1 cut(s)	912
BslI	CCNNNNNNNGG	5 cut(s)	26, 794, 895, 896, 1544
BsmAI	GTCTC	2 cut(s)	951, 1251
BsmFI	GGGAC	1 cut(s)	912
BsmI	GAATGC	1 cut(s)	297
BsnI	GGCC	3 cut(s)	30, 240, 1161
BsoBI	CYCGRG	1 cut(s)	1377
Bsp1286I	GDGCHC	1 cut(s)	1535
Bsp1407I	TGTACA	2 cut(s)	260, 1132
Bsp143I	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
BspACI	CCGC	1 cut(s)	1387
BspANI	GGCC	3 cut(s)	30, 240, 1161
BspCNI	CTCAG	5 cut(s)	191, 245, 630, 1012, 1429
BspDI	ATCGAT	1 cut(s)	1424
BspFNI	CGCG	1 cut(s)	1387
BspHI	TCATGA	1 cut(s)	1264
BspLI	GGNNCC	1 cut(s)	373
BspMAI	CTGCAG	1 cut(s)	280
BspPI	GGATC	3 cut(s)	775, 1352, 1459
BspT107I	GGYRCC	1 cut(s)	371
BsrDI	GCAATG	2 cut(s)	99, 1366
BsrGI	TGTACA	2 cut(s)	260, 1132
BsrI	ACTGG	1 cut(s)	1416
BssECI	CCNNGG	3 cut(s)	681, 1008, 1272
BssMI	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
BssT1I	CCWWGG	2 cut(s)	681, 1272
Bst2UI	CCWGG	1 cut(s)	1009
Bst4CI	ACNGT	6 cut(s)	285, 376, 404, 530, 988, 1124
Bst6I	CTCTTC	1 cut(s)	899
BstAUI	TGTACA	2 cut(s)	260, 1132
BstBAI	YACGTR	2 cut(s)	1052, 1286
BstC8I	GCNNGC	5 cut(s)	6, 28, 540, 1322, 1326
BstDEI	CTNAG	7 cut(s)	178, 232, 617, 1020, 1292, 1340, 1437
BstENI	CCTNNNNNAGG	1 cut(s)	24
BstF5I	GGATG	2 cut(s)	920, 1030
BstFNI	CGCG	1 cut(s)	1387
BstHHI	GCGC	1 cut(s)	1387
BstKTI	GATC	9 cut(s)	606, 700, 745, 770, 1129, 1264, 1347, 1428, 1467
BstMAI	GTCTC	2 cut(s)	951, 1251
BstMBI	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
BstMWI	GCNNNNNNNGC	3 cut(s)	200, 1109, 1187
BstNI	CCWGG	1 cut(s)	1009
BstNSI	RCATGY	2 cut(s)	1139, 1324
BstSCI	CCNGG	1 cut(s)	1007
BstSFI	CTRYAG	3 cut(s)	276, 400, 726
BstSNI	TACGTA	2 cut(s)	1052, 1286
BstUI	CGCG	1 cut(s)	1387
BstV1I	GCAGC	1 cut(s)	290
BstV2I	GAAGAC	2 cut(s)	419, 1399
BstX2I	RGATCY	1 cut(s)	767
BstYI	RGATCY	1 cut(s)	767
Bsu15I	ATCGAT	1 cut(s)	1424
Bsu36I	CCTNAGG	1 cut(s)	1340
BsuRI	GGCC	3 cut(s)	30, 240, 1161
BsuTUI	ATCGAT	1 cut(s)	1424
BtrI	CACGTC	1 cut(s)	162
BtsCI	GGATG	2 cut(s)	920, 1030
BtsI	GCAGTG	1 cut(s)	263
BtsIMutI	CAGTG	5 cut(s)	263, 281, 372, 993, 1203
Cac8I	GCNNGC	5 cut(s)	6, 28, 540, 1322, 1326
CaiI	CAGNNNCTG	1 cut(s)	1019
CciI	TCATGA	1 cut(s)	1264
CfoI	GCGC	1 cut(s)	1387
Cfr13I	GGNCC	1 cut(s)	1159
ClaI	ATCGAT	1 cut(s)	1424
Csp6I	GTAC	6 cut(s)	261, 372, 992, 1133, 1287, 1336
CviAII	CATG	8 cut(s)	514, 649, 929, 1130, 1136, 1259, 1265, 1321
CviQI	GTAC	6 cut(s)	261, 372, 992, 1133, 1287, 1336
DdeI	CTNAG	7 cut(s)	178, 232, 617, 1020, 1292, 1340, 1437
DpnI	GATC	9 cut(s)	605, 699, 744, 769, 1128, 1263, 1346, 1427, 1466
DpnII	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
DraI	TTTAAA	1 cut(s)	586
DriI	GACNNNNNGTC	1 cut(s)	1001
Eam1104I	CTCTTC	1 cut(s)	899
Eam1105I	GACNNNNNGTC	1 cut(s)	1001
EarI	CTCTTC	1 cut(s)	899
Ecl136II	GAGCTC	1 cut(s)	1533
Eco105I	TACGTA	2 cut(s)	1052, 1286
Eco130I	CCWWGG	2 cut(s)	681, 1272
Eco147I	AGGCCT	1 cut(s)	30
Eco24I	GRGCYC	1 cut(s)	1535
Eco53kI	GAGCTC	1 cut(s)	1533
Eco57I	CTGAAG	2 cut(s)	923, 1202
Eco81I	CCTNAGG	1 cut(s)	1340
Eco88I	CYCGRG	1 cut(s)	1377
EcoICRI	GAGCTC	1 cut(s)	1533
EcoNI	CCTNNNNNAGG	1 cut(s)	24
EcoRII	CCWGG	1 cut(s)	1007
EcoT14I	CCWWGG	2 cut(s)	681, 1272
EcoT38I	GRGCYC	1 cut(s)	1535
ErhI	CCWWGG	2 cut(s)	681, 1272
FaeI	CATG	8 cut(s)	517, 652, 932, 1133, 1139, 1262, 1268, 1324
FaqI	GGGAC	1 cut(s)	912
FatI	CATG	8 cut(s)	513, 648, 928, 1129, 1135, 1258, 1264, 1320
FbaI	TGATCA	3 cut(s)	603, 1126, 1261
FblI	GTMKAC	2 cut(s)	725, 803
Fnu4HI	GCNGC	1 cut(s)	279
FokI	GGATG	2 cut(s)	927, 1037
FriOI	GRGCYC	1 cut(s)	1535
Fsp4HI	GCNGC	1 cut(s)	279
FspBI	CTAG	6 cut(s)	81, 123, 189, 492, 771, 1224
GlaI	GCGC	1 cut(s)	1386
GluI	GCNGC	1 cut(s)	279
GsuI	CTGGAG	1 cut(s)	1433
HaeIII	GGCC	3 cut(s)	30, 240, 1161
HhaI	GCGC	1 cut(s)	1387
Hin1II	CATG	8 cut(s)	517, 652, 932, 1133, 1139, 1262, 1268, 1324
Hin6I	GCGC	1 cut(s)	1385
HinP1I	GCGC	1 cut(s)	1385
HinfI	GANTC	7 cut(s)	428, 809, 1016, 1238, 1421, 1470, 1524
HphI	GGTGA	5 cut(s)	158, 237, 997, 1136, 1527
Hpy166II	GTNNAC	3 cut(s)	261, 726, 804
Hpy188I	TCNGA	9 cut(s)	181, 235, 484, 694, 742, 1021, 1120, 1221, 1469
Hpy188III	TCNNGA	8 cut(s)	92, 771, 818, 854, 1153, 1250, 1265, 1528
Hpy8I	GTNNAC	3 cut(s)	261, 726, 804
Hpy99I	CGWCG	1 cut(s)	999
HpyAV	CCTTC	6 cut(s)	788, 1057, 1078, 1150, 1411, 1548
HpyCH4III	ACNGT	6 cut(s)	285, 376, 404, 530, 988, 1124
HpyCH4IV	ACGT	3 cut(s)	161, 1051, 1285
HpyF10VI	GCNNNNNNNGC	3 cut(s)	200, 1109, 1187
HpyF3I	CTNAG	7 cut(s)	178, 232, 617, 1020, 1292, 1340, 1437
HpySE526I	ACGT	3 cut(s)	161, 1051, 1285
Hsp92II	CATG	8 cut(s)	517, 652, 932, 1133, 1139, 1262, 1268, 1324
HspAI	GCGC	1 cut(s)	1385
KpnI	GGTACC	1 cut(s)	375
Ksp22I	TGATCA	3 cut(s)	603, 1126, 1261
Kzo9I	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
LmnI	GCTCC	1 cut(s)	1382
Lsp1109I	GCAGC	1 cut(s)	290
LweI	GCATC	6 cut(s)	13, 17, 203, 347, 525, 683
MaeI	CTAG	6 cut(s)	81, 123, 189, 492, 771, 1224
MaeII	ACGT	3 cut(s)	161, 1051, 1285
MaeIII	GTNAC	2 cut(s)	243, 1003
MalI	GATC	9 cut(s)	605, 699, 744, 769, 1128, 1263, 1346, 1427, 1466
MboI	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
MboII	GAAGA	9 cut(s)	293, 424, 509, 563, 878, 916, 1208, 1379, 1404
MflI	RGATCY	1 cut(s)	767
MhlI	GDGCHC	1 cut(s)	1535
MlyI	GAGTC	2 cut(s)	803, 1464
MmeI	TCCRAC	1 cut(s)	1492
MroXI	GAANNNNTTC	2 cut(s)	555, 1212
MseI	TTAA	4 cut(s)	452, 585, 591, 1304
MslI	CAYNNNNRTG	3 cut(s)	762, 1134, 1263
MspR9I	CCNGG	1 cut(s)	1009
Mva1269I	GAATGC	1 cut(s)	297
MvaI	CCWGG	1 cut(s)	1009
MvnI	CGCG	1 cut(s)	1387
MwoI	GCNNNNNNNGC	3 cut(s)	200, 1109, 1187
NdeII	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
NlaIII	CATG	8 cut(s)	517, 652, 932, 1133, 1139, 1262, 1268, 1324
NlaIV	GGNNCC	1 cut(s)	373
NmuCI	GTSAC	2 cut(s)	243, 1003
NspI	RCATGY	2 cut(s)	1139, 1324
PaeI	GCATGC	1 cut(s)	1324
PaeR7I	CTCGAG	1 cut(s)	1377
PagI	TCATGA	1 cut(s)	1264
PceI	AGGCCT	1 cut(s)	30
PctI	GAATGC	1 cut(s)	297
PdmI	GAANNNNTTC	2 cut(s)	555, 1212
PfeI	GAWTC	5 cut(s)	428, 1016, 1238, 1421, 1524
PkrI	GCNGC	1 cut(s)	280
PleI	GAGTC	2 cut(s)	803, 1464
PpsI	GAGTC	2 cut(s)	803, 1464
Ppu21I	YACGTR	2 cut(s)	1052, 1286
PsiI	TTATAA	1 cut(s)	1403
Psp124BI	GAGCTC	1 cut(s)	1535
Psp6I	CCWGG	1 cut(s)	1007
PspGI	CCWGG	1 cut(s)	1007
PspN4I	GGNNCC	1 cut(s)	373
PspPI	GGNCC	1 cut(s)	1159
PspXI	VCTCGAGB	1 cut(s)	1377
PstI	CTGCAG	1 cut(s)	280
PstNI	CAGNNNCTG	1 cut(s)	1019
PsuI	RGATCY	1 cut(s)	767
RsaI	GTAC	6 cut(s)	262, 373, 993, 1134, 1288, 1337
RsaNI	GTAC	6 cut(s)	261, 372, 992, 1133, 1287, 1336
RseI	CAYNNNNRTG	3 cut(s)	762, 1134, 1263
SacI	GAGCTC	1 cut(s)	1535
SaqAI	TTAA	4 cut(s)	452, 585, 591, 1304
SatI	GCNGC	1 cut(s)	279
Sau3AI	GATC	9 cut(s)	603, 697, 742, 767, 1126, 1261, 1344, 1425, 1464
Sau96I	GGNCC	1 cut(s)	1159
SchI	GAGTC	2 cut(s)	803, 1464
ScrFI	CCNGG	1 cut(s)	1009
SduI	GDGCHC	1 cut(s)	1535
SfaNI	GCATC	6 cut(s)	13, 17, 203, 347, 525, 683
SfcI	CTRYAG	3 cut(s)	276, 400, 726
Sfr274I	CTCGAG	1 cut(s)	1377
SlaI	CTCGAG	1 cut(s)	1377
SmiMI	CAYNNNNRTG	3 cut(s)	762, 1134, 1263
SmlI	CTYRAG	5 cut(s)	92, 249, 818, 1377, 1495
SmoI	CTYRAG	5 cut(s)	92, 249, 818, 1377, 1495
SnaBI	TACGTA	2 cut(s)	1052, 1286
SphI	GCATGC	1 cut(s)	1324
SseBI	AGGCCT	1 cut(s)	30
SsiI	CCGC	1 cut(s)	1387
SspI	AATATT	2 cut(s)	1070, 1461
SspMI	CTAG	6 cut(s)	81, 123, 189, 492, 771, 1224
SstI	GAGCTC	1 cut(s)	1535
StuI	AGGCCT	1 cut(s)	30
StyD4I	CCNGG	1 cut(s)	1007
StyI	CCWWGG	2 cut(s)	681, 1272
TaaI	ACNGT	6 cut(s)	285, 376, 404, 530, 988, 1124
TaiI	ACGT	3 cut(s)	164, 1054, 1288
TaqI	TCGA	5 cut(s)	1152, 1378, 1424, 1473, 1514
TatI	WGTACW	2 cut(s)	260, 1132
TfiI	GAWTC	5 cut(s)	428, 1016, 1238, 1421, 1524
Tru1I	TTAA	4 cut(s)	452, 585, 591, 1304
Tru9I	TTAA	4 cut(s)	452, 585, 591, 1304
TscAI	CASTG	5 cut(s)	263, 288, 372, 993, 1210
TseFI	GTSAC	2 cut(s)	243, 1003
TseI	GCWGC	1 cut(s)	278
Tsp45I	GTSAC	2 cut(s)	243, 1003
TspDTI	ATGAA	8 cut(s)	441, 611, 917, 1097, 1281, 1380, 1530, 1533
TspRI	CASTG	5 cut(s)	263, 288, 372, 993, 1210
XagI	CCTNNNNNAGG	1 cut(s)	24
XapI	RAATTY	5 cut(s)	150, 166, 554, 688, 1145
XbaI	TCTAGA	1 cut(s)	770
XceI	RCATGY	2 cut(s)	1139, 1324
XhoI	CTCGAG	1 cut(s)	1377
XmiI	GTMKAC	2 cut(s)	725, 803
XmnI	GAANNNNTTC	2 cut(s)	555, 1212
XspI	CTAG	6 cut(s)	81, 123, 189, 492, 771, 1224

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.