Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002624

Physical Location & Seq

Genomic Coordinates Forward (+)

65073680 .. 65081178

Gene Structure 7499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00045920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGCAAGCATCTACCTTACCTGATGCAGGCCTTGATAAAGAGCAAAAGGACTTGACATATTTGCGTGATGTGTTTAGCTCTAGTTGTTCTCTTGAGGACATTGCCTCTGCTTATGTCAAGGCTAGGCACAATGTAGAAATGGCTGGTGAAATTCTTCGCGCGTCACATTTATGTTCCTCAGATGGTGCTAGTTCATCAAAGCCTATATTTGAGGGTGCAAGTGAGACATTTTCAGATGGCCTGTCACCTCAAGTGCAGTGTACAAGCGAAGTTCCTGCAGCACTGTCATCTGACAGCATTCTTCAAAAGACCTCTAATGGAGTTGGCAATAACAGAGCATCAAAGTCAAAAAGACCTCCTCTATCAGTGGGTACCGTTTCTGGTGTGATAGGAAAAGACTACAGTAGGCAGAAGACATCAACAAATGAATCTGCTGAAATGCAGAAACCATTAAAATTAGAATTGAAAGAAATGCCTTTCTCTGATTTATCGAGTGAAGAAGTCCAATCAAGCATGACAGCTAATAACAGTAAGATGCACACCGATATTGAAGAATTTCTGTTTGAAATGCTTGGAGATGGCTTTAAACTTAATATGAATGTGATCAAAGAAGTTCTCAAGCATGGAGAAACTTCTTTTATGTCAGCATCAACCTTGGAAAATTCTGATGATCTTGTTAGTTTAGAAAGTTCAAAGCCTACTGAGAAGTGTTCAGATCAACATTCTGCTCATAGTAATGGATCTAGAACTGCAAGAAATCCAATAGAAGGTGGGTCTACTGACTCTGCTCTTGAGAAAGAGTTATTTGAAGCATTGTTTGGTGTTCCTGAAAGATTGGAAGAAGCACCTAAAGTAAATCTCCCATCAAGGGGACTGAAGAGAAATGGATATAGGGGATTTCATGGTAATTTGGTGGTTGAACCTTTTAGAGACACAATTATAGAAAACAAAATTGCGACAGTGGTACGACGAGAAGTCACCAGGGCAGAAGCTGAGGATGTTGAGAATAGCTATGAGGTTCTACGTAATTCTGTGAAGGAATATTGGATTACAATGAAGGAGTATTACAAAACTGCTTTAGATGCATTTTCTGAGGGTGATCATGCACGTGCAGATAAATTTTTAGAGAAGGGCCATTTCTTTTGCAGAAAGGCACGGGAAGCAGATGACAAATCCACTGAAAAACTTCTTCAGTCTAGAGATGATGCTGATTCTGTGTCTCTTGACTTGCATGATCATGAACCCAAGGAAGCTATACGTACTCTAAGGTCTGAATTAACCTATCTCTCCGGCATGCCAGCTTTCAAGTACCTTAGGATCATAGTGGGAAGCAATGATGAAGATACCACTCGAGGAGCGCGGAGAAGACTGATTATAAAACAACTGGAGGAGGAATCGATCAAATGGACTGAGGAGGAGAATGGGCAGATAATATTGATCCGACTTGATGTGATTGACCCGAAGCGCCTGAGCTTCTCAAAAAAATCGAATGAAAGAATCCAGAGTTCACCTTCATTTGGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043331 GO:0044237 GO:0044238 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:1901360 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1771

Protein Analysis

508

Amino Acids

56.61

Weight (kDa)

5.36

Isoelectric Point (pI)

48.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_At5g58720	PF24767	12 - 54	1.3e-06	At5g58720 UBA-like domain
DUF1771	PF08590	338 - 400	8.6e-13	Domain of unknown function (DUF1771)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15390 AT3G15390 AT3G15390
fragaria_vesca	FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430 FvH4_3g20430
malus_domestica	MD00G1089400.v1.1
prunus_persica	Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1 Prupe.4G184000_v2.0.a1
pyrus_communis	pycom11g21510
rosa_chinensis	RchiOBHm_Chr5g0034321
rosa_laevigata	RLG00000033540
rosa_multiflora	Rmu_sc0000062.1_g000019
rosa_roxburghii	Rroxscaffold_1G00045920 Rroxscaffold_1G00045950
rosa_rugosa	Rorug05G0145300 Rorug05G0145300
rosa_samantha	Rh5AG236900 Rh5BG237400 Rh5CG267200 Rh5DG244900
rosa_wichuraiana	Rw0G022190 Rw5G021270 Rw5G021660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1376
Acc65I	GGTACC	1 cut(s)	371
AccB1I	GGYRCC	1 cut(s)	371
AccI	GTMKAC	1 cut(s)	776
AccII	CGCG	3 cut(s)	159, 161, 1360
AciI	CCGC	1 cut(s)	1360
AclWI	GGATC	3 cut(s)	748, 1325, 1432
AcsI	RAATTY	4 cut(s)	150, 554, 661, 1118
AcuI	CTGAAG	2 cut(s)	896, 1175
AcvI	CACGTG	1 cut(s)	1109
AfaI	GTAC	5 cut(s)	262, 373, 966, 1261, 1310
AfiI	CCNNNNNNNGG	5 cut(s)	26, 767, 868, 869, 1517
AgsI	TTSAA	8 cut(s)	305, 466, 551, 566, 693, 809, 920, 1306
AhdI	GACNNNNNGTC	1 cut(s)	974
AjnI	CCWGG	1 cut(s)	980
AjuI	GAANNNNNNNTTGG	2 cut(s)	801, 833
AluBI	AGCT	7 cut(s)	78, 521, 992, 1011, 1253, 1301, 1473
AluI	AGCT	7 cut(s)	78, 521, 992, 1011, 1253, 1301, 1473
Alw26I	GTCTC	3 cut(s)	218, 924, 1224
AlwI	GGATC	3 cut(s)	748, 1325, 1432
AlwNI	CAGNNNCTG	1 cut(s)	992
Ama87I	CYCGRG	1 cut(s)	1350
AoxI	GGCC	3 cut(s)	28, 238, 1132
ApeKI	GCWGC	1 cut(s)	278
ApoI	RAATTY	4 cut(s)	150, 554, 661, 1118
Asp700I	GAANNNNTTC	3 cut(s)	153, 555, 1185
Asp718I	GGTACC	1 cut(s)	371
AspLEI	GCGC	3 cut(s)	161, 1360, 1467
AspS9I	GGNCC	1 cut(s)	1132
AsuHPI	GGTGA	5 cut(s)	158, 237, 970, 1109, 1500
AvaI	CYCGRG	1 cut(s)	1350
AxyI	CCTNAGG	1 cut(s)	1313
BanI	GGYRCC	1 cut(s)	371
BarI	GAAGNNNNNNTAC	2 cut(s)	1049, 1081
BbrPI	CACGTG	1 cut(s)	1109
BbsI	GAAGAC	2 cut(s)	419, 1372
BbvCI	CCTCAGC	1 cut(s)	993
BbvI	GCAGC	1 cut(s)	290
BccI	CCATC	4 cut(s)	176, 230, 572, 871
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	1 cut(s)	982
BclI	TGATCA	3 cut(s)	603, 1099, 1234
BcoDI	GTCTC	3 cut(s)	218, 924, 1224
BfaI	CTAG	5 cut(s)	81, 123, 189, 744, 1197
BfmI	CTRYAG	2 cut(s)	276, 400
BfoI	RGCGCY	1 cut(s)	1468
BisI	GCNGC	1 cut(s)	279
BlsI	GCNGC	1 cut(s)	280
Bme1390I	CCNGG	1 cut(s)	982
BmeRI	GACNNNNNGTC	1 cut(s)	974
BmeT110I	CYCGRG	1 cut(s)	1350
BmgT120I	GGNCC	1 cut(s)	1132
BmiI	GGNNCC	1 cut(s)	373
BmrFI	CCNGG	1 cut(s)	982
BmsI	GCATC	7 cut(s)	13, 17, 347, 525, 656, 1072, 1195
BpiI	GAAGAC	2 cut(s)	419, 1372
BpmI	CTGGAG	1 cut(s)	1406
Bpu10I	CCTNAGC	2 cut(s)	993, 1469
BpuEI	CTTGAG	4 cut(s)	113, 234, 602, 812
Bsa29I	ATCGAT	1 cut(s)	1397
BsaAI	YACGTR	3 cut(s)	1025, 1109, 1259
BsaJI	CCNNGG	3 cut(s)	654, 981, 1245
Bsc4I	CCNNNNNNNGG	5 cut(s)	26, 767, 868, 869, 1517
Bse1I	ACTGG	1 cut(s)	1389
Bse21I	CCTNAGG	1 cut(s)	1313
Bse3DI	GCAATG	2 cut(s)	99, 1339
BseBI	CCWGG	1 cut(s)	982
BseCI	ATCGAT	1 cut(s)	1397
BseDI	CCNNGG	3 cut(s)	654, 981, 1245
BseGI	GGATG	1 cut(s)	1003
BseLI	CCNNNNNNNGG	5 cut(s)	26, 767, 868, 869, 1517
BseMI	GCAATG	2 cut(s)	99, 1339
BseMII	CTCAG	6 cut(s)	192, 693, 984, 1083, 1401, 1460
BseNI	ACTGG	1 cut(s)	1389
BseRI	GAGGAG	5 cut(s)	348, 1368, 1403, 1427, 1430
BseXI	GCAGC	1 cut(s)	290
BsgI	GTGCAG	2 cut(s)	275, 1131
Bsh1236I	CGCG	3 cut(s)	159, 161, 1360
BshFI	GGCC	3 cut(s)	30, 240, 1134
BshNI	GGYRCC	1 cut(s)	371
BshVI	ATCGAT	1 cut(s)	1397
BsiHKCI	CYCGRG	1 cut(s)	1350
BsiSI	CCGG	1 cut(s)	1290
BslFI	GGGAC	1 cut(s)	885
BslI	CCNNNNNNNGG	5 cut(s)	26, 767, 868, 869, 1517
BsmAI	GTCTC	3 cut(s)	218, 924, 1224
BsmFI	GGGAC	1 cut(s)	885
BsmI	GAATGC	1 cut(s)	297
BsnI	GGCC	3 cut(s)	30, 240, 1134
BsoBI	CYCGRG	1 cut(s)	1350
Bsp1407I	TGTACA	1 cut(s)	260
Bsp143I	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
BspACI	CCGC	1 cut(s)	1360
BspANI	GGCC	3 cut(s)	30, 240, 1134
BspCNI	CTCAG	6 cut(s)	191, 694, 985, 1084, 1402, 1461
BspDI	ATCGAT	1 cut(s)	1397
BspFNI	CGCG	3 cut(s)	159, 161, 1360
BspHI	TCATGA	1 cut(s)	1237
BspLI	GGNNCC	1 cut(s)	373
BspMAI	CTGCAG	1 cut(s)	280
BspPI	GGATC	3 cut(s)	748, 1325, 1432
BspT107I	GGYRCC	1 cut(s)	371
BsrDI	GCAATG	2 cut(s)	99, 1339
BsrGI	TGTACA	1 cut(s)	260
BsrI	ACTGG	1 cut(s)	1389
BssECI	CCNNGG	3 cut(s)	654, 981, 1245
BssMI	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
BssT1I	CCWWGG	2 cut(s)	654, 1245
Bst2UI	CCWGG	1 cut(s)	982
Bst4CI	ACNGT	5 cut(s)	285, 376, 404, 530, 961
Bst6I	CTCTTC	1 cut(s)	872
BstAUI	TGTACA	1 cut(s)	260
BstBAI	YACGTR	3 cut(s)	1025, 1109, 1259
BstC8I	GCNNGC	4 cut(s)	6, 28, 1295, 1299
BstDEI	CTNAG	8 cut(s)	178, 702, 993, 1092, 1265, 1313, 1410, 1469
BstENI	CCTNNNNNAGG	1 cut(s)	24
BstF5I	GGATG	1 cut(s)	1003
BstFNI	CGCG	3 cut(s)	159, 161, 1360
BstH2I	RGCGCY	1 cut(s)	1468
BstHHI	GCGC	3 cut(s)	161, 1360, 1467
BstKTI	GATC	9 cut(s)	606, 673, 718, 743, 1102, 1237, 1320, 1401, 1440
BstMAI	GTCTC	3 cut(s)	218, 924, 1224
BstMBI	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
BstMWI	GCNNNNNNNGC	2 cut(s)	1082, 1160
BstNI	CCWGG	1 cut(s)	982
BstNSI	RCATGY	1 cut(s)	1297
BstSCI	CCNGG	1 cut(s)	980
BstSFI	CTRYAG	2 cut(s)	276, 400
BstSNI	TACGTA	2 cut(s)	1025, 1259
BstUI	CGCG	3 cut(s)	159, 161, 1360
BstV1I	GCAGC	1 cut(s)	290
BstV2I	GAAGAC	2 cut(s)	419, 1372
BstX2I	RGATCY	1 cut(s)	740
BstYI	RGATCY	1 cut(s)	740
Bsu15I	ATCGAT	1 cut(s)	1397
Bsu36I	CCTNAGG	1 cut(s)	1313
BsuRI	GGCC	3 cut(s)	30, 240, 1134
BsuTUI	ATCGAT	1 cut(s)	1397
BtsCI	GGATG	1 cut(s)	1003
BtsI	GCAGTG	1 cut(s)	263
BtsIMutI	CAGTG	5 cut(s)	263, 281, 372, 966, 1176
Cac8I	GCNNGC	4 cut(s)	6, 28, 1295, 1299
CaiI	CAGNNNCTG	1 cut(s)	992
CciI	TCATGA	1 cut(s)	1237
CfoI	GCGC	3 cut(s)	161, 1360, 1467
Cfr13I	GGNCC	1 cut(s)	1132
ClaI	ATCGAT	1 cut(s)	1397
CseI	GACGC	1 cut(s)	150
Csp6I	GTAC	5 cut(s)	261, 372, 965, 1260, 1309
CviAII	CATG	7 cut(s)	514, 623, 902, 1103, 1232, 1238, 1294
CviQI	GTAC	5 cut(s)	261, 372, 965, 1260, 1309
DdeI	CTNAG	8 cut(s)	178, 702, 993, 1092, 1265, 1313, 1410, 1469
DpnI	GATC	9 cut(s)	605, 672, 717, 742, 1101, 1236, 1319, 1400, 1439
DpnII	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
DraI	TTTAAA	1 cut(s)	586
DriI	GACNNNNNGTC	1 cut(s)	974
Eam1104I	CTCTTC	1 cut(s)	872
Eam1105I	GACNNNNNGTC	1 cut(s)	974
EarI	CTCTTC	1 cut(s)	872
Eco105I	TACGTA	2 cut(s)	1025, 1259
Eco130I	CCWWGG	2 cut(s)	654, 1245
Eco147I	AGGCCT	1 cut(s)	30
Eco57I	CTGAAG	2 cut(s)	896, 1175
Eco72I	CACGTG	1 cut(s)	1109
Eco81I	CCTNAGG	1 cut(s)	1313
Eco88I	CYCGRG	1 cut(s)	1350
EcoNI	CCTNNNNNAGG	1 cut(s)	24
EcoRII	CCWGG	1 cut(s)	980
EcoT14I	CCWWGG	2 cut(s)	654, 1245
EcoT22I	ATGCAT	1 cut(s)	1087
ErhI	CCWWGG	2 cut(s)	654, 1245
FaeI	CATG	7 cut(s)	517, 626, 905, 1106, 1235, 1241, 1297
FaqI	GGGAC	1 cut(s)	885
FatI	CATG	7 cut(s)	513, 622, 901, 1102, 1231, 1237, 1293
FbaI	TGATCA	3 cut(s)	603, 1099, 1234
FblI	GTMKAC	1 cut(s)	776
Fnu4HI	GCNGC	1 cut(s)	279
FokI	GGATG	1 cut(s)	1010
Fsp4HI	GCNGC	1 cut(s)	279
FspBI	CTAG	5 cut(s)	81, 123, 189, 744, 1197
GlaI	GCGC	3 cut(s)	160, 1359, 1466
GluI	GCNGC	1 cut(s)	279
GsuI	CTGGAG	1 cut(s)	1406
HaeII	RGCGCY	1 cut(s)	1468
HaeIII	GGCC	3 cut(s)	30, 240, 1134
HapII	CCGG	1 cut(s)	1290
HgaI	GACGC	1 cut(s)	150
HhaI	GCGC	3 cut(s)	161, 1360, 1467
Hin1II	CATG	7 cut(s)	517, 626, 905, 1106, 1235, 1241, 1297
Hin6I	GCGC	3 cut(s)	159, 1358, 1465
HinP1I	GCGC	3 cut(s)	159, 1358, 1465
HinfI	GANTC	5 cut(s)	428, 782, 1211, 1394, 1497
HpaII	CCGG	1 cut(s)	1290
HphI	GGTGA	5 cut(s)	158, 237, 970, 1109, 1500
Hpy166II	GTNNAC	3 cut(s)	261, 777, 1508
Hpy188I	TCNGA	9 cut(s)	181, 235, 292, 484, 667, 715, 1093, 1273, 1442
Hpy188III	TCNNGA	8 cut(s)	92, 744, 791, 827, 1197, 1223, 1238, 1501
Hpy8I	GTNNAC	3 cut(s)	261, 777, 1508
Hpy99I	CGWCG	1 cut(s)	972
HpyAV	CCTTC	5 cut(s)	761, 1030, 1051, 1123, 1521
HpyCH4III	ACNGT	5 cut(s)	285, 376, 404, 530, 961
HpyCH4IV	ACGT	3 cut(s)	1024, 1108, 1258
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1082, 1160
HpyF3I	CTNAG	8 cut(s)	178, 702, 993, 1092, 1265, 1313, 1410, 1469
HpySE526I	ACGT	3 cut(s)	1024, 1108, 1258
Hsp92II	CATG	7 cut(s)	517, 626, 905, 1106, 1235, 1241, 1297
HspAI	GCGC	3 cut(s)	159, 1358, 1465
KpnI	GGTACC	1 cut(s)	375
Ksp22I	TGATCA	3 cut(s)	603, 1099, 1234
Kzo9I	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
LmnI	GCTCC	1 cut(s)	1355
Lsp1109I	GCAGC	1 cut(s)	290
LweI	GCATC	7 cut(s)	13, 17, 347, 525, 656, 1072, 1195
MaeI	CTAG	5 cut(s)	81, 123, 189, 744, 1197
MaeII	ACGT	3 cut(s)	1024, 1108, 1258
MaeIII	GTNAC	3 cut(s)	162, 243, 976
MalI	GATC	9 cut(s)	605, 672, 717, 742, 1101, 1236, 1319, 1400, 1439
MboI	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
MflI	RGATCY	1 cut(s)	740
MlyI	GAGTC	1 cut(s)	776
MmeI	TCCRAC	1 cut(s)	1465
Mph1103I	ATGCAT	1 cut(s)	1087
MroXI	GAANNNNTTC	3 cut(s)	153, 555, 1185
MseI	TTAA	4 cut(s)	452, 585, 591, 1277
MslI	CAYNNNNRTG	4 cut(s)	169, 735, 1107, 1236
MspI	CCGG	1 cut(s)	1290
MspR9I	CCNGG	1 cut(s)	982
Mva1269I	GAATGC	1 cut(s)	297
MvaI	CCWGG	1 cut(s)	982
MvnI	CGCG	3 cut(s)	159, 161, 1360
MwoI	GCNNNNNNNGC	2 cut(s)	1082, 1160
NdeII	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
NlaIII	CATG	7 cut(s)	517, 626, 905, 1106, 1235, 1241, 1297
NlaIV	GGNNCC	1 cut(s)	373
NmuCI	GTSAC	3 cut(s)	162, 243, 976
NsiI	ATGCAT	1 cut(s)	1087
NspI	RCATGY	1 cut(s)	1297
PaeI	GCATGC	1 cut(s)	1297
PaeR7I	CTCGAG	1 cut(s)	1350
PagI	TCATGA	1 cut(s)	1237
PceI	AGGCCT	1 cut(s)	30
PctI	GAATGC	1 cut(s)	297
PdmI	GAANNNNTTC	3 cut(s)	153, 555, 1185
PfeI	GAWTC	4 cut(s)	428, 1211, 1394, 1497
PkrI	GCNGC	1 cut(s)	280
PleI	GAGTC	1 cut(s)	776
PmaCI	CACGTG	1 cut(s)	1109
PmlI	CACGTG	1 cut(s)	1109
PpsI	GAGTC	1 cut(s)	776
Ppu21I	YACGTR	3 cut(s)	1025, 1109, 1259
PsiI	TTATAA	1 cut(s)	1376
Psp6I	CCWGG	1 cut(s)	980
PspCI	CACGTG	1 cut(s)	1109
PspGI	CCWGG	1 cut(s)	980
PspN4I	GGNNCC	1 cut(s)	373
PspPI	GGNCC	1 cut(s)	1132
PspXI	VCTCGAGB	1 cut(s)	1350
PstI	CTGCAG	1 cut(s)	280
PstNI	CAGNNNCTG	1 cut(s)	992
PsuI	RGATCY	1 cut(s)	740
RsaI	GTAC	5 cut(s)	262, 373, 966, 1261, 1310
RsaNI	GTAC	5 cut(s)	261, 372, 965, 1260, 1309
RseI	CAYNNNNRTG	4 cut(s)	169, 735, 1107, 1236
SaqAI	TTAA	4 cut(s)	452, 585, 591, 1277
SatI	GCNGC	1 cut(s)	279
Sau3AI	GATC	9 cut(s)	603, 670, 715, 740, 1099, 1234, 1317, 1398, 1437
Sau96I	GGNCC	1 cut(s)	1132
SchI	GAGTC	1 cut(s)	776
ScrFI	CCNGG	1 cut(s)	982
SfaNI	GCATC	7 cut(s)	13, 17, 347, 525, 656, 1072, 1195
SfcI	CTRYAG	2 cut(s)	276, 400
Sfr274I	CTCGAG	1 cut(s)	1350
SlaI	CTCGAG	1 cut(s)	1350
SmiMI	CAYNNNNRTG	4 cut(s)	169, 735, 1107, 1236
SmlI	CTYRAG	5 cut(s)	92, 249, 617, 791, 1350
SmoI	CTYRAG	5 cut(s)	92, 249, 617, 791, 1350
SnaBI	TACGTA	2 cut(s)	1025, 1259
SphI	GCATGC	1 cut(s)	1297
SseBI	AGGCCT	1 cut(s)	30
SsiI	CCGC	1 cut(s)	1360
SspI	AATATT	2 cut(s)	1043, 1434
SspMI	CTAG	5 cut(s)	81, 123, 189, 744, 1197
StuI	AGGCCT	1 cut(s)	30
StyD4I	CCNGG	1 cut(s)	980
StyI	CCWWGG	2 cut(s)	654, 1245
TaaI	ACNGT	5 cut(s)	285, 376, 404, 530, 961
TaiI	ACGT	3 cut(s)	1027, 1111, 1261
TaqI	TCGA	4 cut(s)	491, 1351, 1397, 1487
TatI	WGTACW	1 cut(s)	260
TfiI	GAWTC	4 cut(s)	428, 1211, 1394, 1497
Tru1I	TTAA	4 cut(s)	452, 585, 591, 1277
Tru9I	TTAA	4 cut(s)	452, 585, 591, 1277
TscAI	CASTG	5 cut(s)	263, 288, 372, 966, 1183
TseFI	GTSAC	3 cut(s)	162, 243, 976
TseI	GCWGC	1 cut(s)	278
Tsp45I	GTSAC	3 cut(s)	162, 243, 976
TspDTI	ATGAA	9 cut(s)	183, 441, 611, 890, 1070, 1254, 1353, 1503, 1506
TspRI	CASTG	5 cut(s)	263, 288, 372, 966, 1183
XagI	CCTNNNNNAGG	1 cut(s)	24
XapI	RAATTY	4 cut(s)	150, 554, 661, 1118
XbaI	TCTAGA	2 cut(s)	743, 1196
XceI	RCATGY	1 cut(s)	1297
XhoI	CTCGAG	1 cut(s)	1350
XmiI	GTMKAC	1 cut(s)	776
XmnI	GAANNNNTTC	3 cut(s)	153, 555, 1185
XspI	CTAG	5 cut(s)	81, 123, 189, 744, 1197
Zsp2I	ATGCAT	1 cut(s)	1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.