Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0007984

Physical Location & Seq

Genomic Coordinates Reverse (-)

18509757 .. 18515764

Gene Structure 6008 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1089700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGTGAAGAAGACGGAGAGGAAGGTCAACATCTCCGGCAAGCCGAAGCACTCTCTGGATGCAAACCGTTCCGATGCCAAGGCCAAGAACAAGGACGCGCGTACCGGCGCCACCGTCCGCCGCCTTAAGATGTACAACACCAGGCCCAAGCGTAACAGAAAGGGAAAGGTCCTGAGGAACGAGTTCCAGTCCAAGGAGCTGCCTAACACTCGTATCCAGCCTGATCGCCGCTGGTTTGGGAATACTCGGGTTGCGTCTCAGCAGCAGCTTGACATCTTCCGCGAGGAGCACAGTAGGACGGTTTCGAGTAATTACAATGTTATTTTGAAGGGGAAGGAATTGCCATTGTCTCTCTTGAATGACCATCAGAAGCAAACCAGAGTTCATCTTCTAGAGAGAGAGACATTTTCTGATGTATTTGGACCTAAGACAAAGAGGAAACGTCCAAAGCTCCTCGCGGCAGATTATGAGTCCTTAGCTAAGAAGGCTGATGGTTCTCAGGATGTGTTTCAGGAGAAGCATGCTGATGACAGTGTTGTAGAAGGTAATGAAGCGGATGGATTTAGGGACCTAGTTCGGCATACAATGTTTGAGAAGGGCCAAAGTAAACGTATTTGGGGTGAGCTCTACAAAGTGATAGACTCTTCTGATGTGGTTGTCCAGGTTTTGGATGCAAGGGACCCACAAGGTACAAGATGCCACCACTTAGAGAAGCATTTGAAAGAGCATTGCACGCATAAACACTTAATTCTTTTGTTAAACAAGTGTGATTTGGTTCCTTCATGGGTGCTTAGCCGTTGGTTGAACGTATTAAAGGCTGAATTTCCAACTATTGCATTTCATGCTAGCGTCAATAAATCATTTGGCAAGGGAACTCTTCTATCAGTTTTGAGACAATTCGCCCGTTTGAAAAGTGACAAGCAGGCCATTTCTGTGGGATTTGTTGGGTATCCCAATGTTGGAAAGTCATCTGTTATCAACACATTGCGAACTAAAAATGTTTGCAAAGTTGCTCCTATCCCAGGGGAGACTAAAGTGTGGCAGTATATAACACTCACAAAGAGGATTTTCTTGATTGATTGCCCTGGAGTTGTCTATCAAAGCGGTGATTCTGAAACAGATATTGTACTGAAGGGGGTGGTACGTGTCACAAATTTGCAGGATGCTACAGAACACATAGGAGAAGTTCTGAAACGAGTTAAGAAGATCCACCTGAAAAGAGCATATAAGATAGAGAACTGGGAGGATGATAATGACTTCCTGTGTCAGCTATGCAAATTGTCAGGCAAACTTTTGAAGGGTGGTGAACCCGACTTGATGACTGCAGCAAAGATGGTCCTCCATGACTGGCAGAGGGGTAAGATACCATTTTTTGTGCCGCCACCAAAAAGAGAATCGCCAACAGGGGAGCCTGATATAAATCACAATAAAGAAGACACTGTGGAAGATAACAATCAGGCTGCAGCTTATCGAGCCATTGGAGATATTATTGCATCTCAGAAGGTGAGCACTATCCCTGTGCAAAGGGATCTTTTCAGTGAAGAAGAGTTAAGGGGCGATGAAGGACCGGAACATCTCCCAGCCGCTGAAGTATCTGAGAAGTCTCCAGAGTCGGACGATGAAGTATCTGAGCACAGTGACTCCGAGGATGACGCGGCTGAACAGTCTGAGGATTCTGAAGGCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0042254 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NGP1NT

Protein Analysis

563

Amino Acids

63.71

Weight (kDa)

8.91

Isoelectric Point (pI)

45.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NGP1NT	PF08153	44 - 168	3.3e-44	NGP1NT (NUC091) domain
MMR_HSR1	PF01926	312 - 396	7.2e-16	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52980
fragaria_vesca	FvH4_5g29580 FvH4_5g29580
malus_domestica	MD00G1089700.v1.1 MD03G1224500.v1.1 MD10G1052400.v1.1
prunus_persica	Prupe.4G184700_v2.0.a1
pyrus_communis	pycom10g03710 pycom11g21460
rosa_chinensis	RchiOBHm_Chr7g0222551
rosa_laevigata	RLG00000002045
rosa_multiflora	Rmu_sc0000312.1_g000002 Rmu_sc0011862.1_g000002 Rmu_ssc0000146.1_g000030
rosa_roxburghii	Rroxscaffold_3G00236670 Rroxscaffold_5G00375010
rosa_rugosa	Rorug07G0210800
rosa_samantha	Rh7AG353900 Rh7BG342700 Rh7CG371400 Rh7DG349200
rosa_wichuraiana	Rw0G020100 Rw7G029770 Rw7G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	107
AccB7I	CCANNNNNTGG	1 cut(s)	667
AccII	CGCG	5 cut(s)	98, 100, 282, 458, 1655
AclWI	GGATC	2 cut(s)	1201, 1536
AcsI	RAATTY	2 cut(s)	821, 1153
AcuI	CTGAAG	2 cut(s)	1151, 1608
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	5 cut(s)	103, 134, 691, 1128, 1143
AfiI	CCNNNNNNNGG	4 cut(s)	193, 667, 959, 1022
AflII	CTTAAG	1 cut(s)	125
AflIII	ACRYGT	1 cut(s)	1144
AgsI	TTSAA	6 cut(s)	328, 358, 721, 805, 910, 1297
AjnI	CCWGG	4 cut(s)	140, 660, 1021, 1084
AluBI	AGCT	7 cut(s)	199, 268, 451, 479, 625, 1270, 1466
AluI	AGCT	7 cut(s)	199, 268, 451, 479, 625, 1270, 1466
Alw21I	GWGCWC	4 cut(s)	291, 627, 1511, 1635
Alw26I	GTCTC	6 cut(s)	261, 354, 395, 886, 1022, 1608
AlwI	GGATC	2 cut(s)	1201, 1536
AlwNI	CAGNNNCTG	1 cut(s)	1586
Ama87I	CYCGRG	1 cut(s)	246
AoxI	GGCC	4 cut(s)	81, 143, 598, 924
ApeKI	GCWGC	6 cut(s)	199, 262, 265, 1325, 1460, 1463
ApoI	RAATTY	2 cut(s)	821, 1153
Asp700I	GAANNNNTTC	1 cut(s)	182
AspLEI	GCGC	2 cut(s)	100, 110
AspS9I	GGNCC	8 cut(s)	144, 169, 422, 568, 598, 679, 1336, 1565
AsuHPI	GGTGA	5 cut(s)	16, 632, 1118, 1316, 1516
AsuNHI	GCTAGC	1 cut(s)	845
AvaI	CYCGRG	1 cut(s)	246
AvaII	GGWCC	6 cut(s)	169, 422, 568, 679, 1336, 1565
AxyI	CCTNAGG	1 cut(s)	173
BaeI	ACNNNNGTAYC	4 cut(s)	85, 118, 196, 229
BanI	GGYRCC	1 cut(s)	107
BanII	GRGCYC	1 cut(s)	627
BbsI	GAAGAC	2 cut(s)	17, 1440
Bbv12I	GWGCWC	4 cut(s)	291, 627, 1511, 1635
BbvI	GCAGC	6 cut(s)	186, 274, 277, 1337, 1447, 1475
BccI	CCATC	4 cut(s)	372, 485, 551, 1327
BceAI	ACGGC	1 cut(s)	780
BciT130I	CCWGG	4 cut(s)	142, 662, 1023, 1086
BciVI	GTATCC	2 cut(s)	224, 960
BcoDI	GTCTC	6 cut(s)	261, 354, 395, 886, 1022, 1608
BfaI	CTAG	3 cut(s)	392, 572, 846
BfmI	CTRYAG	3 cut(s)	1167, 1323, 1461
BfoI	RGCGCY	1 cut(s)	111
BfrI	CTTAAG	1 cut(s)	125
BfuI	GTATCC	2 cut(s)	224, 960
BlpI	GCTNAGC	1 cut(s)	791
Bme1390I	CCNGG	4 cut(s)	142, 662, 1023, 1086
Bme18I	GGWCC	6 cut(s)	169, 422, 568, 679, 1336, 1565
BmeT110I	CYCGRG	1 cut(s)	246
BmgT120I	GGNCC	8 cut(s)	144, 169, 422, 568, 598, 679, 1336, 1565
BmiI	GGNNCC	6 cut(s)	109, 569, 680, 681, 777, 1410
BmrFI	CCNGG	4 cut(s)	142, 662, 1023, 1086
BmrI	ACTGGG	1 cut(s)	1249
BmsI	GCATC	6 cut(s)	49, 64, 661, 686, 1153, 1502
BmtI	GCTAGC	1 cut(s)	849
BmuI	ACTGGG	1 cut(s)	1249
BpiI	GAAGAC	2 cut(s)	17, 1440
BpmI	CTGGAG	2 cut(s)	1107, 1590
Bpu10I	CCTNAGC	1 cut(s)	475
Bpu1102I	GCTNAGC	1 cut(s)	791
BsaAI	YACGTR	1 cut(s)	1145
BsaBI	GATNNNNATC	2 cut(s)	1419, 1452
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	6 cut(s)	78, 192, 1021, 1022, 1084, 1644
BsaWI	WCCGGW	1 cut(s)	1567
BsaXI	ACNNNNNCTCC	2 cut(s)	1625, 1655
Bsc4I	CCNNNNNNNGG	4 cut(s)	193, 667, 959, 1022
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	3 cut(s)	187, 1244, 1352
Bse21I	CCTNAGG	1 cut(s)	173
Bse3DI	GCAATG	2 cut(s)	727, 983
Bse8I	GATNNNNATC	2 cut(s)	1419, 1452
BseBI	CCWGG	4 cut(s)	142, 662, 1023, 1086
BseDI	CCNNGG	6 cut(s)	78, 192, 1021, 1022, 1084, 1644
BseGI	GGATG	7 cut(s)	64, 508, 562, 676, 1168, 1252, 1654
BseJI	GATNNNNATC	2 cut(s)	1419, 1452
BseLI	CCNNNNNNNGG	4 cut(s)	193, 667, 959, 1022
BseMI	GCAATG	2 cut(s)	727, 983
BseMII	CTCAG	7 cut(s)	164, 272, 512, 1511, 1587, 1620, 1659
BseNI	ACTGG	3 cut(s)	187, 1244, 1352
BseRI	GAGGAG	2 cut(s)	299, 443
BseXI	GCAGC	6 cut(s)	186, 274, 277, 1337, 1447, 1475
BseYI	CCCAGC	1 cut(s)	1579
Bsh1236I	CGCG	5 cut(s)	98, 100, 282, 458, 1655
BshFI	GGCC	4 cut(s)	83, 145, 600, 926
BshNI	GGYRCC	1 cut(s)	107
BsiHKAI	GWGCWC	4 cut(s)	291, 627, 1511, 1635
BsiHKCI	CYCGRG	1 cut(s)	246
BsiSI	CCGG	3 cut(s)	36, 105, 1568
BslFI	GGGAC	2 cut(s)	581, 692
BslI	CCNNNNNNNGG	4 cut(s)	193, 667, 959, 1022
BsmAI	GTCTC	6 cut(s)	261, 354, 395, 886, 1022, 1608
BsmBI	CGTCTC	1 cut(s)	261
BsmFI	GGGAC	2 cut(s)	581, 692
BsnI	GGCC	4 cut(s)	83, 145, 600, 926
BsoBI	CYCGRG	1 cut(s)	246
Bsp1286I	GDGCHC	4 cut(s)	291, 627, 1511, 1635
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	3 cut(s)	223, 1206, 1528
Bsp1720I	GCTNAGC	1 cut(s)	791
BspANI	GGCC	4 cut(s)	83, 145, 600, 926
BspCNI	CTCAG	7 cut(s)	165, 271, 511, 1510, 1588, 1621, 1660
BspFNI	CGCG	5 cut(s)	98, 100, 282, 458, 1655
BspLI	GGNNCC	6 cut(s)	109, 569, 680, 681, 777, 1410
BspMAI	CTGCAG	2 cut(s)	1327, 1465
BspOI	GCTAGC	1 cut(s)	849
BspPI	GGATC	2 cut(s)	1201, 1536
BspT107I	GGYRCC	1 cut(s)	107
BspTI	CTTAAG	1 cut(s)	125
BsrDI	GCAATG	2 cut(s)	727, 983
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	3 cut(s)	187, 1244, 1352
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	6 cut(s)	78, 192, 1021, 1022, 1084, 1644
BssMI	GATC	3 cut(s)	223, 1206, 1528
BssNI	GRCGYC	1 cut(s)	108
BssT1I	CCWWGG	2 cut(s)	78, 192
Bst2UI	CCWGG	4 cut(s)	142, 662, 1023, 1086
Bst4CI	ACNGT	8 cut(s)	68, 115, 293, 301, 533, 1441, 1637, 1665
Bst6I	CTCTTC	3 cut(s)	649, 882, 1539
BstACI	GRCGYC	1 cut(s)	108
BstAFI	CTTAAG	1 cut(s)	125
BstAPI	GCANNNNNTGC	1 cut(s)	842
BstAUI	TGTACA	1 cut(s)	132
BstBAI	YACGTR	1 cut(s)	1145
BstC8I	GCNNGC	5 cut(s)	41, 522, 734, 847, 924
BstENI	CCTNNNNNAGG	1 cut(s)	1020
BstF5I	GGATG	7 cut(s)	64, 508, 562, 676, 1168, 1252, 1654
BstFNI	CGCG	5 cut(s)	98, 100, 282, 458, 1655
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	2 cut(s)	100, 110
BstKTI	GATC	3 cut(s)	226, 1209, 1531
BstMAI	GTCTC	6 cut(s)	261, 354, 395, 886, 1022, 1608
BstMBI	GATC	3 cut(s)	223, 1206, 1528
BstMWI	GCNNNNNNNGC	4 cut(s)	485, 733, 842, 1472
BstNI	CCWGG	4 cut(s)	142, 662, 1023, 1086
BstNSI	RCATGY	1 cut(s)	524
BstSCI	CCNGG	4 cut(s)	140, 660, 1021, 1084
BstSFI	CTRYAG	3 cut(s)	1167, 1323, 1461
BstUI	CGCG	5 cut(s)	98, 100, 282, 458, 1655
BstV1I	GCAGC	6 cut(s)	186, 274, 277, 1337, 1447, 1475
BstV2I	GAAGAC	2 cut(s)	17, 1440
BstX2I	RGATCY	2 cut(s)	1206, 1528
BstXI	CCANNNNNNTGG	1 cut(s)	934
BstYI	RGATCY	2 cut(s)	1206, 1528
Bsu36I	CCTNAGG	1 cut(s)	173
BsuI	GTATCC	2 cut(s)	224, 960
BsuRI	GGCC	4 cut(s)	83, 145, 600, 926
BtgZI	GCGATG	1 cut(s)	1572
BtsCI	GGATG	7 cut(s)	64, 508, 562, 676, 1168, 1252, 1654
BtsIMutI	CAGTG	4 cut(s)	538, 1437, 1543, 1642
Cac8I	GCNNGC	5 cut(s)	41, 522, 734, 847, 924
CaiI	CAGNNNCTG	1 cut(s)	1586
CfoI	GCGC	2 cut(s)	100, 110
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	8 cut(s)	144, 169, 422, 568, 598, 679, 1336, 1565
CseI	GACGC	4 cut(s)	104, 243, 838, 1661
Csp6I	GTAC	5 cut(s)	102, 133, 690, 1127, 1142
CviAII	CATG	4 cut(s)	521, 783, 842, 1343
CviQI	GTAC	5 cut(s)	102, 133, 690, 1127, 1142
DinI	GGCGCC	1 cut(s)	109
DpnI	GATC	3 cut(s)	225, 1208, 1530
DpnII	GATC	3 cut(s)	223, 1206, 1528
Eam1104I	CTCTTC	3 cut(s)	649, 882, 1539
EarI	CTCTTC	3 cut(s)	649, 882, 1539
EciI	GGCGGA	1 cut(s)	107
Ecl136II	GAGCTC	1 cut(s)	625
Eco130I	CCWWGG	2 cut(s)	78, 192
Eco24I	GRGCYC	1 cut(s)	627
Eco47I	GGWCC	6 cut(s)	169, 422, 568, 679, 1336, 1565
Eco53kI	GAGCTC	1 cut(s)	625
Eco57I	CTGAAG	2 cut(s)	1151, 1608
Eco81I	CCTNAGG	1 cut(s)	173
Eco88I	CYCGRG	1 cut(s)	246
EcoICRI	GAGCTC	1 cut(s)	625
EcoNI	CCTNNNNNAGG	1 cut(s)	1020
EcoO109I	RGGNCCY	3 cut(s)	169, 568, 679
EcoRII	CCWGG	4 cut(s)	140, 660, 1021, 1084
EcoT14I	CCWWGG	2 cut(s)	78, 192
EcoT38I	GRGCYC	1 cut(s)	627
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	2 cut(s)	78, 192
Esp3I	CGTCTC	1 cut(s)	261
FaeI	CATG	4 cut(s)	524, 786, 845, 1346
FaqI	GGGAC	2 cut(s)	581, 692
FatI	CATG	4 cut(s)	520, 782, 841, 1342
FokI	GGATG	7 cut(s)	71, 515, 569, 683, 1175, 1259, 1661
FriOI	GRGCYC	1 cut(s)	627
FspBI	CTAG	3 cut(s)	392, 572, 846
GlaI	GCGC	2 cut(s)	99, 109
GsaI	CCCAGC	1 cut(s)	1583
GsuI	CTGGAG	2 cut(s)	1107, 1590
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	4 cut(s)	83, 145, 600, 926
HapII	CCGG	3 cut(s)	36, 105, 1568
HgaI	GACGC	4 cut(s)	104, 243, 838, 1661
HhaI	GCGC	2 cut(s)	100, 110
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	4 cut(s)	524, 786, 845, 1346
Hin6I	GCGC	2 cut(s)	98, 108
HinP1I	GCGC	2 cut(s)	98, 108
HincII	GTYRAC	1 cut(s)	28
HindII	GTYRAC	1 cut(s)	28
HinfI	GANTC	7 cut(s)	470, 641, 1109, 1394, 1610, 1640, 1673
HpaII	CCGG	3 cut(s)	36, 105, 1568
HphI	GGTGA	5 cut(s)	16, 632, 1118, 1316, 1516
Hpy166II	GTNNAC	3 cut(s)	28, 608, 1307
Hpy188III	TCNNGA	8 cut(s)	56, 172, 355, 392, 500, 512, 1072, 1607
Hpy8I	GTNNAC	3 cut(s)	28, 608, 1307
HpyCH4III	ACNGT	8 cut(s)	68, 115, 293, 301, 533, 1441, 1637, 1665
HpyCH4IV	ACGT	4 cut(s)	442, 610, 807, 1144
HpyF10VI	GCNNNNNNNGC	4 cut(s)	485, 733, 842, 1472
HpySE526I	ACGT	4 cut(s)	442, 610, 807, 1144
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	4 cut(s)	524, 786, 845, 1346
HspAI	GCGC	2 cut(s)	98, 108
KasI	GGCGCC	1 cut(s)	107
KflI	GGGWCCC	1 cut(s)	679
Kzo9I	GATC	3 cut(s)	223, 1206, 1528
LmnI	GCTCC	5 cut(s)	196, 286, 456, 1018, 1408
Lsp1109I	GCAGC	6 cut(s)	186, 274, 277, 1337, 1447, 1475
LweI	GCATC	6 cut(s)	49, 64, 661, 686, 1153, 1502
MaeI	CTAG	3 cut(s)	392, 572, 846
MaeII	ACGT	4 cut(s)	442, 610, 807, 1144
MaeIII	GTNAC	4 cut(s)	152, 914, 1147, 1637
MalI	GATC	3 cut(s)	225, 1208, 1530
MboI	GATC	3 cut(s)	223, 1206, 1528
MflI	RGATCY	2 cut(s)	1206, 1528
MhlI	GDGCHC	4 cut(s)	291, 627, 1511, 1635
MluCI	AATT	7 cut(s)	310, 338, 747, 821, 896, 1153, 1277
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	4 cut(s)	479, 635, 1619, 1634
MmeI	TCCRAC	3 cut(s)	851, 940, 1593
MroXI	GAANNNNTTC	1 cut(s)	182
MseI	TTAA	6 cut(s)	126, 746, 758, 812, 1200, 1550
MslI	CAYNNNNRTG	2 cut(s)	525, 932
MspA1I	CMGCKG	2 cut(s)	231, 1586
MspCI	CTTAAG	1 cut(s)	125
MspI	CCGG	3 cut(s)	36, 105, 1568
MspR9I	CCNGG	4 cut(s)	142, 662, 1023, 1086
MvaI	CCWGG	4 cut(s)	142, 662, 1023, 1086
MvnI	CGCG	5 cut(s)	98, 100, 282, 458, 1655
MwoI	GCNNNNNNNGC	4 cut(s)	485, 733, 842, 1472
NarI	GGCGCC	1 cut(s)	108
NdeII	GATC	3 cut(s)	223, 1206, 1528
NheI	GCTAGC	1 cut(s)	845
NlaIII	CATG	4 cut(s)	524, 786, 845, 1346
NlaIV	GGNNCC	6 cut(s)	109, 569, 680, 681, 777, 1410
NmuCI	GTSAC	3 cut(s)	914, 1147, 1637
NspI	RCATGY	1 cut(s)	524
PaeI	GCATGC	1 cut(s)	524
PasI	CCCWGGG	1 cut(s)	1022
PdmI	GAANNNNTTC	1 cut(s)	182
PfeI	GAWTC	3 cut(s)	1109, 1394, 1673
PflMI	CCANNNNNTGG	1 cut(s)	667
PleI	GAGTC	4 cut(s)	478, 635, 1618, 1634
PluTI	GGCGCC	1 cut(s)	111
PpsI	GAGTC	4 cut(s)	478, 635, 1618, 1634
Ppu21I	YACGTR	1 cut(s)	1145
PpuMI	RGGWCCY	3 cut(s)	169, 568, 679
Psp124BI	GAGCTC	1 cut(s)	627
Psp5II	RGGWCCY	3 cut(s)	169, 568, 679
Psp6I	CCWGG	4 cut(s)	140, 660, 1021, 1084
PspFI	CCCAGC	1 cut(s)	1579
PspGI	CCWGG	4 cut(s)	140, 660, 1021, 1084
PspN4I	GGNNCC	6 cut(s)	109, 569, 680, 681, 777, 1410
PspPI	GGNCC	8 cut(s)	144, 169, 422, 568, 598, 679, 1336, 1565
PspPPI	RGGWCCY	3 cut(s)	169, 568, 679
PstI	CTGCAG	2 cut(s)	1327, 1465
PstNI	CAGNNNCTG	1 cut(s)	1586
PsuI	RGATCY	2 cut(s)	1206, 1528
RsaI	GTAC	5 cut(s)	103, 134, 691, 1128, 1143
RsaNI	GTAC	5 cut(s)	102, 133, 690, 1127, 1142
RseI	CAYNNNNRTG	2 cut(s)	525, 932
SacI	GAGCTC	1 cut(s)	627
SaqAI	TTAA	6 cut(s)	126, 746, 758, 812, 1200, 1550
Sau3AI	GATC	3 cut(s)	223, 1206, 1528
Sau96I	GGNCC	8 cut(s)	144, 169, 422, 568, 598, 679, 1336, 1565
SchI	GAGTC	4 cut(s)	479, 635, 1619, 1634
ScrFI	CCNGG	4 cut(s)	142, 662, 1023, 1086
SduI	GDGCHC	4 cut(s)	291, 627, 1511, 1635
SfaNI	GCATC	6 cut(s)	49, 64, 661, 686, 1153, 1502
SfcI	CTRYAG	3 cut(s)	1167, 1323, 1461
SfoI	GGCGCC	1 cut(s)	109
SinI	GGWCC	6 cut(s)	169, 422, 568, 679, 1336, 1565
SmiMI	CAYNNNNRTG	2 cut(s)	525, 932
SmlI	CTYRAG	1 cut(s)	125
SmoI	CTYRAG	1 cut(s)	125
SphI	GCATGC	1 cut(s)	524
Sse9I	AATT	7 cut(s)	310, 338, 747, 821, 896, 1153, 1277
SspDI	GGCGCC	1 cut(s)	107
SspMI	CTAG	3 cut(s)	392, 572, 846
SstI	GAGCTC	1 cut(s)	627
StyD4I	CCNGG	4 cut(s)	140, 660, 1021, 1084
StyI	CCWWGG	2 cut(s)	78, 192
TaaI	ACNGT	8 cut(s)	68, 115, 293, 301, 533, 1441, 1637, 1665
TaiI	ACGT	4 cut(s)	445, 613, 810, 1147
TaqI	TCGA	2 cut(s)	305, 1471
TasI	AATT	7 cut(s)	310, 338, 747, 821, 896, 1153, 1277
TatI	WGTACW	2 cut(s)	132, 1126
TauI	GCSGC	6 cut(s)	123, 231, 461, 1381, 1586, 1658
TfiI	GAWTC	3 cut(s)	1109, 1394, 1673
Tru1I	TTAA	6 cut(s)	126, 746, 758, 812, 1200, 1550
Tru9I	TTAA	6 cut(s)	126, 746, 758, 812, 1200, 1550
TscAI	CASTG	4 cut(s)	538, 1444, 1543, 1642
TseFI	GTSAC	3 cut(s)	914, 1147, 1637
TseI	GCWGC	6 cut(s)	199, 262, 265, 1325, 1460, 1463
Tsp45I	GTSAC	3 cut(s)	914, 1147, 1637
TspDTI	ATGAA	6 cut(s)	374, 564, 771, 830, 1575, 1635
TspGWI	ACGGA	1 cut(s)	29
TspRI	CASTG	4 cut(s)	538, 1444, 1543, 1642
Van91I	CCANNNNNTGG	1 cut(s)	667
Vha464I	CTTAAG	1 cut(s)	125
VpaK11BI	GGWCC	6 cut(s)	169, 422, 568, 679, 1336, 1565
XagI	CCTNNNNNAGG	1 cut(s)	1020
XapI	RAATTY	2 cut(s)	821, 1153
XbaI	TCTAGA	1 cut(s)	391
XceI	RCATGY	1 cut(s)	524
XmnI	GAANNNNTTC	1 cut(s)	182
XspI	CTAG	3 cut(s)	392, 572, 846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.