Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0007984

Physical Location & Seq

Genomic Coordinates Forward (+)

4021898 .. 4023570

Gene Structure 1673 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g03710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGTGAAGAAGACGGAGAGAAAAGTGAACATCTCTGAAAATCCGAAGCACTCTCTGGACGCAAACCGTTCCGATGGCAAGGCCAATAACAAGGACGCGCGTACCGGCGCCACCGTCCGCCGCCTCAAGATGTACAACACTAGGCCCAAACGTAACCGCAAGGGAACGGTCTTGAGGAACAAGTTCCAGTCCAAGGAGTTGCCTAACACTCGTATCCAGCCCGATCGCGGCCTGTTTGGGGTTACTCGGGCTGCGTCTCAGCAGCAGATCGACATTTTCCGTGAGGAGCACGGTAGGACGGTTTCAAGTAACTACAATGTTATTTTGAAGGAGAAGCAATTACCATGGTCCCTCTTGAATGACCATCAGAAGCAAACCAGATTCCATCTTTTAGAGAAAGAGACATTTTCTAATGTCTTTGGACCTATAACAAAGAGGAAACGTCCAAAGCTCCTCGCAGCAGATTATGAATCCTTAGCTAAGAAGGCTGATGTGTTTCAGGAGAACCATGCCGCTGACAATGTTGTAGAAGGTAGTGAAGCGGATGGATTTCGGGACCTGGTTCGGCATACAATGTTTGAGAAGGGCCAAAGTAAACGTATTTGGGGTGAGCTCTACAAAGTCGTAGACTCTTCTGATGTGGTTGTCCACGTTTTGGATGCAAGGGATCCACAAGGTACAAGATGCCACCACTTAGAGAAATATTTGAAAGAGCACTGCATGCATAAACACTTAATTCTTTTGTTGAACAAGTGTGATTTGATTCCTTCATGGGTGCTTAGACGTTGGTTGAACGTACAAAAGGCTGAATTTCCAACTATTGCATTTCATGCTAGCATCAATAAATCGTTTGGCAAGGGAACTCTTCTATCAGTTTTGAGACAATTCGCCCGTTTGAAAAGCAACAAGCAATCATCTGTTATCAACACATTGCGAACTAAAAATGTTTGCAAAGTTGCTCCTATCCCGGGGAAGACTAAAGTGTGGCAGTATATAACACTCACAACGAGGATTGTCTTGATTGATTGCCCTGGAGTTGTCTATCAAAGCGGTGACTCTGAAACAGATATTGTACTGAAGGGCGTGGTACGTGTCACAATCCACCTGAAAAGAGCATATAAGATAGAGAAGTGGGAAGATGATAATGACTTCCTATGTCAGCTATGCAAATTGTCAGGCAAACTTTTGAAGGGTGGTGAACCCGACTTGATGACTGCAGCTAAGATGGTCCTCCACGACTGGCAGAGGGGTAAGATACCATTTTTTATGCCGCCACCAAAAAGTGATTCGTCAACCGGGGAGCCTGATATCAATCACAATAAAGATGACACTGTGGAAGATAACAATCAGGAGGCAGCTTATCGAGCCATTGGAGATATTATTTCATTTCAGAAGATCTGCACTATCCCGGTGCAAAGGGATCTTTTCAGTGAAGAAGAGTTAAATGGCGATGAGGTACCTGAACAGCTTCCAGCCACTGAAGTGTCTGAGAAGTCTCCGGAGTCGGATGATGAAATATCTGGGCAGTCACTGGACCTGGAGGATGACACGGCCGAACAGTCTGGAAATCCTAAACACATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0042254 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NGP1NT

Protein Analysis

528

Amino Acids

60.05

Weight (kDa)

9.04

Isoelectric Point (pI)

47.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NGP1NT	PF08153	44 - 167	1.7e-36	NGP1NT (NUC091) domain
MMR_HSR1	PF01926	305 - 354	9e-07	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52980
fragaria_vesca	FvH4_5g29580 FvH4_5g29580
malus_domestica	MD00G1089700.v1.1 MD03G1224500.v1.1 MD10G1052400.v1.1
prunus_persica	Prupe.4G184700_v2.0.a1
pyrus_communis	pycom10g03710 pycom11g21460
rosa_chinensis	RchiOBHm_Chr7g0222551
rosa_laevigata	RLG00000002045
rosa_multiflora	Rmu_sc0000312.1_g000002 Rmu_sc0011862.1_g000002 Rmu_ssc0000146.1_g000030
rosa_roxburghii	Rroxscaffold_3G00236670 Rroxscaffold_5G00375010
rosa_rugosa	Rorug07G0210800
rosa_samantha	Rh7AG353900 Rh7BG342700 Rh7CG371400 Rh7DG349200
rosa_wichuraiana	Rw0G020100 Rw7G029770 Rw7G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1456
AccB1I	GGYRCC	2 cut(s)	107, 1456
AccB7I	CCANNNNNTGG	1 cut(s)	655
AccI	GTMKAC	1 cut(s)	627
AccII	CGCG	3 cut(s)	98, 100, 228
AccIII	TCCGGA	1 cut(s)	1498
AciI	CCGC	8 cut(s)	118, 121, 157, 228, 513, 542, 1050, 1271
AclWI	GGATC	3 cut(s)	662, 675, 1428
AcoI	YGGCCR	1 cut(s)	1551
AcsI	RAATTY	1 cut(s)	809
AcuI	CTGAAG	2 cut(s)	1097, 1500
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	7 cut(s)	103, 134, 679, 798, 1074, 1089, 1458
AfiI	CCNNNNNNNGG	5 cut(s)	193, 227, 238, 655, 968
AflIII	ACRYGT	1 cut(s)	1090
AgsI	TTSAA	8 cut(s)	306, 328, 358, 709, 748, 793, 898, 1189
AjnI	CCWGG	3 cut(s)	558, 1030, 1536
AjuI	GAANNNNNNNTTGG	2 cut(s)	1270, 1302
AleI	CACNNNNGTG	1 cut(s)	1481
AluBI	AGCT	7 cut(s)	451, 479, 613, 1162, 1220, 1358, 1468
AluI	AGCT	7 cut(s)	451, 479, 613, 1162, 1220, 1358, 1468
Alw21I	GWGCWC	3 cut(s)	291, 615, 717
Alw26I	GTCTC	4 cut(s)	261, 395, 874, 1500
AlwI	GGATC	3 cut(s)	662, 675, 1428
AlwNI	CAGNNNCTG	2 cut(s)	1478, 1531
Ama87I	CYCGRG	2 cut(s)	246, 967
Aor13HI	TCCGGA	1 cut(s)	1498
AoxI	GGCC	5 cut(s)	81, 143, 229, 586, 1551
ApeKI	GCWGC	5 cut(s)	251, 262, 458, 1217, 1355
ApoI	RAATTY	1 cut(s)	809
Asp700I	GAANNNNTTC	2 cut(s)	182, 1467
Asp718I	GGTACC	1 cut(s)	1456
AspLEI	GCGC	2 cut(s)	100, 110
AspS9I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1228, 1534
AsuC2I	CCSGG	4 cut(s)	968, 969, 1297, 1409
AsuHPI	GGTGA	4 cut(s)	16, 620, 1064, 1208
AsuNHI	GCTAGC	1 cut(s)	833
AvaI	CYCGRG	2 cut(s)	246, 967
AvaII	GGWCC	5 cut(s)	348, 422, 556, 1228, 1534
BaeI	ACNNNNGTAYC	4 cut(s)	85, 118, 196, 229
BamHI	GGATCC	1 cut(s)	667
BanI	GGYRCC	2 cut(s)	107, 1456
BanII	GRGCYC	1 cut(s)	615
BbsI	GAAGAC	2 cut(s)	17, 980
Bbv12I	GWGCWC	3 cut(s)	291, 615, 717
BbvI	GCAGC	5 cut(s)	238, 274, 470, 1229, 1367
BccI	CCATC	5 cut(s)	68, 372, 393, 539, 1219
BceAI	ACGGC	1 cut(s)	1566
BciT130I	CCWGG	3 cut(s)	560, 1032, 1538
BciVI	GTATCC	1 cut(s)	224
BcnI	CCSGG	4 cut(s)	968, 969, 1297, 1409
BcoDI	GTCTC	4 cut(s)	261, 395, 874, 1500
BfaI	CTAG	2 cut(s)	141, 834
BfmI	CTRYAG	1 cut(s)	1215
BfoI	RGCGCY	1 cut(s)	111
BfuI	GTATCC	1 cut(s)	224
BglII	AGATCT	1 cut(s)	1395
BisI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1218, 1271, 1356
BlsI	GCNGC	9 cut(s)	122, 230, 253, 264, 460, 514, 1219, 1272, 1357
Bme1390I	CCNGG	7 cut(s)	560, 968, 969, 1032, 1297, 1409, 1538
Bme18I	GGWCC	5 cut(s)	348, 422, 556, 1228, 1534
BmeT110I	CYCGRG	2 cut(s)	246, 967
BmgT120I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1228, 1534
BmiI	GGNNCC	6 cut(s)	109, 350, 557, 669, 1302, 1458
BmrFI	CCNGG	7 cut(s)	560, 968, 969, 1032, 1297, 1409, 1538
BmsI	GCATC	3 cut(s)	649, 674, 846
BmtI	GCTAGC	1 cut(s)	837
BpiI	GAAGAC	2 cut(s)	17, 980
BpmI	CTGGAG	2 cut(s)	1053, 1559
Bpu10I	CCTNAGC	1 cut(s)	475
BpuEI	CTTGAG	2 cut(s)	110, 193
BpuMI	CCSGG	4 cut(s)	968, 969, 1297, 1409
BsaAI	YACGTR	1 cut(s)	1091
BsaBI	GATNNNNATC	2 cut(s)	1311, 1344
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	6 cut(s)	192, 344, 967, 968, 1030, 1296
BsaWI	WCCGGW	1 cut(s)	1498
Bsc4I	CCNNNNNNNGG	5 cut(s)	193, 227, 238, 655, 968
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	3 cut(s)	187, 1244, 1536
Bse3DI	GCAATG	1 cut(s)	929
Bse8I	GATNNNNATC	2 cut(s)	1311, 1344
BseAI	TCCGGA	1 cut(s)	1498
BseBI	CCWGG	3 cut(s)	560, 1032, 1538
BseDI	CCNNGG	6 cut(s)	192, 344, 967, 968, 1030, 1296
BseGI	GGATG	4 cut(s)	550, 664, 1513, 1549
BseJI	GATNNNNATC	2 cut(s)	1311, 1344
BseLI	CCNNNNNNNGG	5 cut(s)	193, 227, 238, 655, 968
BseMI	GCAATG	1 cut(s)	929
BseMII	CTCAG	2 cut(s)	272, 1479
BseNI	ACTGG	3 cut(s)	187, 1244, 1536
BseRI	GAGGAG	2 cut(s)	299, 443
BseX3I	CGGCCG	1 cut(s)	1551
BseXI	GCAGC	5 cut(s)	238, 274, 470, 1229, 1367
BsgI	GTGCAG	1 cut(s)	1384
Bsh1236I	CGCG	3 cut(s)	98, 100, 228
Bsh1285I	CGRYCG	2 cut(s)	226, 1554
BshFI	GGCC	5 cut(s)	83, 145, 231, 588, 1553
BshNI	GGYRCC	2 cut(s)	107, 1456
BsiEI	CGRYCG	2 cut(s)	226, 1554
BsiHKAI	GWGCWC	3 cut(s)	291, 615, 717
BsiHKCI	CYCGRG	2 cut(s)	246, 967
BsiSI	CCGG	5 cut(s)	105, 968, 1296, 1409, 1499
BslFI	GGGAC	2 cut(s)	334, 569
BslI	CCNNNNNNNGG	5 cut(s)	193, 227, 238, 655, 968
BsmAI	GTCTC	4 cut(s)	261, 395, 874, 1500
BsmBI	CGTCTC	1 cut(s)	261
BsmFI	GGGAC	2 cut(s)	334, 569
BsnI	GGCC	5 cut(s)	83, 145, 231, 588, 1553
BsoBI	CYCGRG	2 cut(s)	246, 967
Bsp1286I	GDGCHC	3 cut(s)	291, 615, 717
Bsp13I	TCCGGA	1 cut(s)	1498
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	5 cut(s)	223, 267, 667, 1395, 1420
Bsp19I	CCATGG	1 cut(s)	344
BspACI	CCGC	8 cut(s)	118, 121, 157, 228, 513, 542, 1050, 1271
BspANI	GGCC	5 cut(s)	83, 145, 231, 588, 1553
BspCNI	CTCAG	2 cut(s)	271, 1480
BspEI	TCCGGA	1 cut(s)	1498
BspFNI	CGCG	3 cut(s)	98, 100, 228
BspLI	GGNNCC	6 cut(s)	109, 350, 557, 669, 1302, 1458
BspMAI	CTGCAG	1 cut(s)	1219
BspOI	GCTAGC	1 cut(s)	837
BspPI	GGATC	3 cut(s)	662, 675, 1428
BspT107I	GGYRCC	2 cut(s)	107, 1456
BsrDI	GCAATG	1 cut(s)	929
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	3 cut(s)	187, 1244, 1536
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	6 cut(s)	192, 344, 967, 968, 1030, 1296
BssMI	GATC	5 cut(s)	223, 267, 667, 1395, 1420
BssNI	GRCGYC	1 cut(s)	108
BssT1I	CCWWGG	2 cut(s)	192, 344
Bst2UI	CCWGG	3 cut(s)	560, 1032, 1538
Bst4CI	ACNGT	7 cut(s)	68, 115, 169, 293, 301, 1333, 1560
Bst6I	CTCTTC	3 cut(s)	637, 870, 1431
BstACI	GRCGYC	1 cut(s)	108
BstAPI	GCANNNNNTGC	2 cut(s)	721, 830
BstAUI	TGTACA	1 cut(s)	132
BstBAI	YACGTR	1 cut(s)	1091
BstC8I	GCNNGC	2 cut(s)	722, 835
BstDEI	CTNAG	7 cut(s)	258, 475, 480, 694, 779, 1221, 1488
BstDSI	CCRYGG	1 cut(s)	344
BstF5I	GGATG	4 cut(s)	550, 664, 1513, 1549
BstFNI	CGCG	3 cut(s)	98, 100, 228
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	2 cut(s)	100, 110
BstKTI	GATC	5 cut(s)	226, 270, 670, 1398, 1423
BstMAI	GTCTC	4 cut(s)	261, 395, 874, 1500
BstMBI	GATC	5 cut(s)	223, 267, 667, 1395, 1420
BstMCI	CGRYCG	2 cut(s)	226, 1554
BstMWI	GCNNNNNNNGC	4 cut(s)	485, 721, 830, 1364
BstNI	CCWGG	3 cut(s)	560, 1032, 1538
BstNSI	RCATGY	1 cut(s)	724
BstSCI	CCNGG	7 cut(s)	558, 966, 967, 1030, 1295, 1407, 1536
BstSFI	CTRYAG	1 cut(s)	1215
BstUI	CGCG	3 cut(s)	98, 100, 228
BstV1I	GCAGC	5 cut(s)	238, 274, 470, 1229, 1367
BstV2I	GAAGAC	2 cut(s)	17, 980
BstX2I	RGATCY	3 cut(s)	667, 1395, 1420
BstYI	RGATCY	3 cut(s)	667, 1395, 1420
BstZI	CGGCCG	1 cut(s)	1551
BsuI	GTATCC	1 cut(s)	224
BsuRI	GGCC	5 cut(s)	83, 145, 231, 588, 1553
BtgI	CCRYGG	1 cut(s)	344
BtgZI	GCGATG	1 cut(s)	1464
BtsCI	GGATG	4 cut(s)	550, 664, 1513, 1549
BtsI	GCAGTG	1 cut(s)	715
BtsIMutI	CAGTG	5 cut(s)	715, 1329, 1435, 1476, 1529
Cac8I	GCNNGC	2 cut(s)	722, 835
CaiI	CAGNNNCTG	2 cut(s)	1478, 1531
CfoI	GCGC	2 cut(s)	100, 110
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1228, 1534
Cfr9I	CCCGGG	1 cut(s)	967
CseI	GACGC	3 cut(s)	68, 104, 243
CsiI	ACCWGGT	1 cut(s)	558
Csp6I	GTAC	7 cut(s)	102, 133, 678, 797, 1073, 1088, 1457
CviAII	CATG	5 cut(s)	345, 509, 721, 771, 830
CviQI	GTAC	7 cut(s)	102, 133, 678, 797, 1073, 1088, 1457
DdeI	CTNAG	7 cut(s)	258, 475, 480, 694, 779, 1221, 1488
DinI	GGCGCC	1 cut(s)	109
DpnI	GATC	5 cut(s)	225, 269, 669, 1397, 1422
DpnII	GATC	5 cut(s)	223, 267, 667, 1395, 1420
EaeI	YGGCCR	1 cut(s)	1551
EagI	CGGCCG	1 cut(s)	1551
Eam1104I	CTCTTC	3 cut(s)	637, 870, 1431
EarI	CTCTTC	3 cut(s)	637, 870, 1431
EciI	GGCGGA	1 cut(s)	107
Ecl136II	GAGCTC	1 cut(s)	613
EclXI	CGGCCG	1 cut(s)	1551
Eco130I	CCWWGG	2 cut(s)	192, 344
Eco24I	GRGCYC	1 cut(s)	615
Eco32I	GATATC	1 cut(s)	1309
Eco47I	GGWCC	5 cut(s)	348, 422, 556, 1228, 1534
Eco52I	CGGCCG	1 cut(s)	1551
Eco53kI	GAGCTC	1 cut(s)	613
Eco57I	CTGAAG	2 cut(s)	1097, 1500
Eco88I	CYCGRG	2 cut(s)	246, 967
EcoICRI	GAGCTC	1 cut(s)	613
EcoO109I	RGGNCCY	1 cut(s)	556
EcoRII	CCWGG	3 cut(s)	558, 1030, 1536
EcoRV	GATATC	1 cut(s)	1309
EcoT14I	CCWWGG	2 cut(s)	192, 344
EcoT22I	ATGCAT	1 cut(s)	726
EcoT38I	GRGCYC	1 cut(s)	615
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	2 cut(s)	192, 344
Esp3I	CGTCTC	1 cut(s)	261
FaeI	CATG	5 cut(s)	348, 512, 724, 774, 833
FaqI	GGGAC	2 cut(s)	334, 569
FatI	CATG	5 cut(s)	344, 508, 720, 770, 829
FblI	GTMKAC	1 cut(s)	627
Fnu4HI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1218, 1271, 1356
FokI	GGATG	4 cut(s)	557, 671, 1520, 1556
FriOI	GRGCYC	1 cut(s)	615
Fsp4HI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1218, 1271, 1356
FspBI	CTAG	2 cut(s)	141, 834
GlaI	GCGC	2 cut(s)	99, 109
GluI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1218, 1271, 1356
GsuI	CTGGAG	2 cut(s)	1053, 1559
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	5 cut(s)	83, 145, 231, 588, 1553
HapII	CCGG	5 cut(s)	105, 968, 1296, 1409, 1499
HgaI	GACGC	3 cut(s)	68, 104, 243
HhaI	GCGC	2 cut(s)	100, 110
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	5 cut(s)	348, 512, 724, 774, 833
Hin6I	GCGC	2 cut(s)	98, 108
HinP1I	GCGC	2 cut(s)	98, 108
HincII	GTYRAC	1 cut(s)	1293
HindII	GTYRAC	1 cut(s)	1293
HinfI	GANTC	7 cut(s)	381, 470, 629, 763, 1055, 1286, 1502
HpaII	CCGG	5 cut(s)	105, 968, 1296, 1409, 1499
HphI	GGTGA	4 cut(s)	16, 620, 1064, 1208
Hpy166II	GTNNAC	6 cut(s)	28, 596, 628, 649, 1199, 1293
Hpy8I	GTNNAC	6 cut(s)	28, 596, 628, 649, 1199, 1293
HpyAV	CCTTC	7 cut(s)	322, 478, 524, 577, 777, 1072, 1183
HpyCH4III	ACNGT	7 cut(s)	68, 115, 169, 293, 301, 1333, 1560
HpyCH4IV	ACGT	7 cut(s)	151, 442, 598, 651, 784, 795, 1090
HpyCH4V	TGCA	9 cut(s)	662, 720, 724, 824, 951, 1167, 1217, 1401, 1414
HpyF10VI	GCNNNNNNNGC	4 cut(s)	485, 721, 830, 1364
HpyF3I	CTNAG	7 cut(s)	258, 475, 480, 694, 779, 1221, 1488
HpySE526I	ACGT	7 cut(s)	151, 442, 598, 651, 784, 795, 1090
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	5 cut(s)	348, 512, 724, 774, 833
HspAI	GCGC	2 cut(s)	98, 108
KasI	GGCGCC	1 cut(s)	107
Kpn2I	TCCGGA	1 cut(s)	1498
KpnI	GGTACC	1 cut(s)	1460
Kzo9I	GATC	5 cut(s)	223, 267, 667, 1395, 1420
LmnI	GCTCC	4 cut(s)	286, 456, 964, 1300
Lsp1109I	GCAGC	5 cut(s)	238, 274, 470, 1229, 1367
LweI	GCATC	3 cut(s)	649, 674, 846
MabI	ACCWGGT	1 cut(s)	558
MaeI	CTAG	2 cut(s)	141, 834
MaeII	ACGT	7 cut(s)	151, 442, 598, 651, 784, 795, 1090
MaeIII	GTNAC	6 cut(s)	152, 241, 308, 1052, 1093, 1527
MalI	GATC	5 cut(s)	225, 269, 669, 1397, 1422
MboI	GATC	5 cut(s)	223, 267, 667, 1395, 1420
MflI	RGATCY	3 cut(s)	667, 1395, 1420
MhlI	GDGCHC	3 cut(s)	291, 615, 717
MluCI	AATT	5 cut(s)	338, 735, 809, 884, 1169
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	3 cut(s)	623, 1049, 1511
MmeI	TCCRAC	2 cut(s)	839, 1485
Mph1103I	ATGCAT	1 cut(s)	726
MroI	TCCGGA	1 cut(s)	1498
MroXI	GAANNNNTTC	2 cut(s)	182, 1467
MseI	TTAA	2 cut(s)	734, 1442
MslI	CAYNNNNRTG	1 cut(s)	1481
MspA1I	CMGCKG	1 cut(s)	515
MspI	CCGG	5 cut(s)	105, 968, 1296, 1409, 1499
MspR9I	CCNGG	7 cut(s)	560, 968, 969, 1032, 1297, 1409, 1538
MvaI	CCWGG	3 cut(s)	560, 1032, 1538
MvnI	CGCG	3 cut(s)	98, 100, 228
MwoI	GCNNNNNNNGC	4 cut(s)	485, 721, 830, 1364
NarI	GGCGCC	1 cut(s)	108
NciI	CCSGG	4 cut(s)	968, 969, 1297, 1409
NcoI	CCATGG	1 cut(s)	344
NdeII	GATC	5 cut(s)	223, 267, 667, 1395, 1420
NheI	GCTAGC	1 cut(s)	833
NlaIII	CATG	5 cut(s)	348, 512, 724, 774, 833
NlaIV	GGNNCC	6 cut(s)	109, 350, 557, 669, 1302, 1458
NmuCI	GTSAC	3 cut(s)	1052, 1093, 1527
NsiI	ATGCAT	1 cut(s)	726
NspI	RCATGY	1 cut(s)	724
OliI	CACNNNNGTG	1 cut(s)	1481
PaeI	GCATGC	1 cut(s)	724
PdmI	GAANNNNTTC	2 cut(s)	182, 1467
PfeI	GAWTC	4 cut(s)	381, 470, 763, 1286
PflMI	CCANNNNNTGG	1 cut(s)	655
PkrI	GCNGC	9 cut(s)	122, 230, 253, 264, 460, 514, 1219, 1272, 1357
Ple19I	CGATCG	1 cut(s)	226
PleI	GAGTC	3 cut(s)	623, 1049, 1510
PluTI	GGCGCC	1 cut(s)	111
PpsI	GAGTC	3 cut(s)	623, 1049, 1510
Ppu21I	YACGTR	1 cut(s)	1091
PpuMI	RGGWCCY	1 cut(s)	556
Psp124BI	GAGCTC	1 cut(s)	615
Psp5II	RGGWCCY	1 cut(s)	556
Psp6I	CCWGG	3 cut(s)	558, 1030, 1536
PspGI	CCWGG	3 cut(s)	558, 1030, 1536
PspN4I	GGNNCC	6 cut(s)	109, 350, 557, 669, 1302, 1458
PspPI	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1228, 1534
PspPPI	RGGWCCY	1 cut(s)	556
PstI	CTGCAG	1 cut(s)	1219
PstNI	CAGNNNCTG	2 cut(s)	1478, 1531
PsuI	RGATCY	3 cut(s)	667, 1395, 1420
PvuI	CGATCG	1 cut(s)	226
RsaI	GTAC	7 cut(s)	103, 134, 679, 798, 1074, 1089, 1458
RsaNI	GTAC	7 cut(s)	102, 133, 678, 797, 1073, 1088, 1457
RseI	CAYNNNNRTG	1 cut(s)	1481
SacI	GAGCTC	1 cut(s)	615
SaqAI	TTAA	2 cut(s)	734, 1442
SatI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1218, 1271, 1356
Sau3AI	GATC	5 cut(s)	223, 267, 667, 1395, 1420
Sau96I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1228, 1534
SchI	GAGTC	3 cut(s)	623, 1049, 1511
ScrFI	CCNGG	7 cut(s)	560, 968, 969, 1032, 1297, 1409, 1538
SduI	GDGCHC	3 cut(s)	291, 615, 717
SexAI	ACCWGGT	1 cut(s)	558
SfaNI	GCATC	3 cut(s)	649, 674, 846
SfcI	CTRYAG	1 cut(s)	1215
SfoI	GGCGCC	1 cut(s)	109
SinI	GGWCC	5 cut(s)	348, 422, 556, 1228, 1534
SmaI	CCCGGG	1 cut(s)	969
SmiMI	CAYNNNNRTG	1 cut(s)	1481
SmlI	CTYRAG	2 cut(s)	125, 172
SmoI	CTYRAG	2 cut(s)	125, 172
SphI	GCATGC	1 cut(s)	724
Sse9I	AATT	5 cut(s)	338, 735, 809, 884, 1169
SsiI	CCGC	8 cut(s)	118, 121, 157, 228, 513, 542, 1050, 1271
SspDI	GGCGCC	1 cut(s)	107
SspI	AATATT	1 cut(s)	704
SspMI	CTAG	2 cut(s)	141, 834
SstI	GAGCTC	1 cut(s)	615
StyD4I	CCNGG	7 cut(s)	558, 966, 967, 1030, 1295, 1407, 1536
StyI	CCWWGG	2 cut(s)	192, 344
TaaI	ACNGT	7 cut(s)	68, 115, 169, 293, 301, 1333, 1560
TaiI	ACGT	7 cut(s)	154, 445, 601, 654, 787, 798, 1093
TaqI	TCGA	2 cut(s)	270, 1363
TasI	AATT	5 cut(s)	338, 735, 809, 884, 1169
TatI	WGTACW	2 cut(s)	132, 1072
TauI	GCSGC	4 cut(s)	123, 231, 515, 1273
TfiI	GAWTC	4 cut(s)	381, 470, 763, 1286
Tru1I	TTAA	2 cut(s)	734, 1442
Tru9I	TTAA	2 cut(s)	734, 1442
TscAI	CASTG	5 cut(s)	722, 1336, 1435, 1483, 1536
TseFI	GTSAC	3 cut(s)	1052, 1093, 1527
TseI	GCWGC	5 cut(s)	251, 262, 458, 1217, 1355
Tsp45I	GTSAC	3 cut(s)	1052, 1093, 1527
TspDTI	ATGAA	5 cut(s)	483, 759, 818, 1374, 1527
TspGWI	ACGGA	2 cut(s)	29, 269
TspMI	CCCGGG	1 cut(s)	967
TspRI	CASTG	5 cut(s)	722, 1336, 1435, 1483, 1536
Van91I	CCANNNNNTGG	1 cut(s)	655
VpaK11BI	GGWCC	5 cut(s)	348, 422, 556, 1228, 1534
XapI	RAATTY	1 cut(s)	809
XceI	RCATGY	1 cut(s)	724
XmaI	CCCGGG	1 cut(s)	967
XmiI	GTMKAC	1 cut(s)	627
XmnI	GAANNNNTTC	2 cut(s)	182, 1467
XspI	CTAG	2 cut(s)	141, 834
Zsp2I	ATGCAT	1 cut(s)	726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.