Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0007984

Physical Location & Seq

Genomic Coordinates Reverse (-)

41548307 .. 41552582

Gene Structure 4276 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G029770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGACGAAGAAGACAGAGAGGAAAGTGAACGTTTCCGGGAAGCCGAAGCACTCTCTGGACGCGAACCGCACGGATGGGAAGAACAAAGAGCAGCGAAGTGCGGCCACCGTGCGCCGCCTCAAGATGTACAAGGTCAGGCCCAAGCGTGACCGCAAGGGCAAGTTCATCAGCAACGAATTCCAGTCCAAGGAGGTCGTGGGCCAGAAGGAGCTTCAAGTCTTTCGTGACGAGCTCGAGAATCACATGTCTAATAGATACAATGTGATTTTGAAGGAGAAGAAATTGCCCATGTCTCTTCTTAATGACCATAAGAAGCAATCCAGAGTTCATCTGCTTGAGAGAGAGCCGTTTTCCGATGCATTTGGACCTAAGACAAAGAGGAAGCGTCCAAAACTCTTGGCAGCTAATTACGAGTCCCTAGCTAAGAAAGCCGATGGTTCTCAGGATGTGTTTGAGCAGAAGCACGATGACATTGCTGCAGAAGCAGGCGAAGCGGATGGCTTTAGGGACTTGGTTCGCCATTCAATGTTTGAGAAGGGACAGAGTAAACGTATTTGGGGCGAGCTCTACAAAGTGGTAGACTCCTCAGATGTTGTTGTCCAGGTTTTGGATGCAAGGGATCCGCAAGGTACAAGATGTTACCACTTAGAGAAGCATTTGAAAGAGCATTGCAAACATAAACACTTGATTCTCTTGTTAAACAAGTGTGATTTGGTTCCCGCTTGGGCAACAAAAGGTTGGCTAAAAGTATTGTCGGCGGAGTTTCCAACTCTTGCATTTCATGCTAGCATCAACAAGTCGTTTGGCAAGGGTTCCCTTCTATCAGTGTTGAGGCAATTTTCCCGATTAAAAAGTGACAAGCAAGCAATTTCTGTGGGATTCGTTGGGTATCCCAATGTTGGAAAGTCATCTGTTATCAACACACTGCGAACAAAAAATGTTTGCAAGGTTGCTCCTATTCCAGGGGAAACGAAAGTGTGGCAATATATAACACTCACAAAGAGGATCTTCTTGATTGACTGCCCTGGAGTTGTCTATCAAACCAACGACTCTGAAACAGATATTGTACTGAAGGGCGTGGTACGCGTCACAAACTTGCAGGATGCTTCAGAACACATAGGAGAAGTTTTGAAACGAGTTAAGAAAGAGCACTTGCAAAGAGCATATAAGATAAAAGACTGGGAGGATGATAATGACTTTCTAGTTCAGCTATGCAAATCATCCGGAAAGCTTTTGAAGGGTGGGGAACCTGACCTGATGACAGCGGCAAAGATGATCCTCCATGATTGGCAGAGGGGTAAGATACCATTTTTTGTGCCTCCTCCACAAAGAGAATTGCCATCAGAGGAGCATCCTGCCAATGAAGTAGAAAACGATACACTAATAGATAATAATCAAGCATCAGCATTTAGAGCCATTGCAAATGTTATTTCATCCCAGCAGCAAATGAATGTCCCGGTTCAAAGGGATCTTTATAACGAAAATGAGTTGAAGGAATCTAAGACGGAGAACCTTCCTGAACATGATGTTGAGGCCGAGGCATCTGAGAAGTCTAAGGATTCAGATAGTGAGACTTCTGAGAAGTCTGAGGACTTGGAGGTTGAGGTGTCTGAGCAGTCTTCTGATGCAGAGGATGAAACGTCCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0042254 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NGP1NT

Protein Analysis

549

Amino Acids

62.51

Weight (kDa)

8.67

Isoelectric Point (pI)

40.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NGP1NT	PF08153	60 - 149	2.5e-27	NGP1NT (NUC091) domain
MMR_HSR1	PF01926	292 - 357	6.1e-16	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52980
fragaria_vesca	FvH4_5g29580 FvH4_5g29580
malus_domestica	MD00G1089700.v1.1 MD03G1224500.v1.1 MD10G1052400.v1.1
prunus_persica	Prupe.4G184700_v2.0.a1
pyrus_communis	pycom10g03710 pycom11g21460
rosa_chinensis	RchiOBHm_Chr7g0222551
rosa_laevigata	RLG00000002045
rosa_multiflora	Rmu_sc0000312.1_g000002 Rmu_sc0011862.1_g000002 Rmu_ssc0000146.1_g000030
rosa_roxburghii	Rroxscaffold_3G00236670 Rroxscaffold_5G00375010
rosa_rugosa	Rorug07G0210800
rosa_samantha	Rh7AG353900 Rh7BG342700 Rh7CG371400 Rh7DG349200
rosa_wichuraiana	Rw0G020100 Rw7G029770 Rw7G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1476
AccB7I	CCANNNNNTGG	1 cut(s)	607
AccI	GTMKAC	1 cut(s)	579
AccII	CGCG	2 cut(s)	62, 1086
AccIII	TCCGGA	1 cut(s)	1223
AciI	CCGC	9 cut(s)	67, 101, 115, 151, 494, 623, 720, 758, 1265
AclI	AACGTT	1 cut(s)	30
AclWI	GGATC	5 cut(s)	614, 627, 1013, 1270, 1476
AcoI	YGGCCR	1 cut(s)	102
AcsI	RAATTY	1 cut(s)	176
AcuI	CTGAAG	2 cut(s)	1091, 1092
AfaI	GTAC	4 cut(s)	128, 631, 1068, 1083
AfiI	CCNNNNNNNGG	4 cut(s)	187, 607, 899, 962
AflIII	ACRYGT	2 cut(s)	243, 1084
AgsI	TTSAA	8 cut(s)	215, 271, 525, 661, 1132, 1237, 1463, 1492
AjnI	CCWGG	3 cut(s)	600, 961, 1024
AluBI	AGCT	7 cut(s)	211, 232, 404, 422, 565, 1210, 1231
AluI	AGCT	7 cut(s)	211, 232, 404, 422, 565, 1210, 1231
Alw21I	GWGCWC	3 cut(s)	234, 567, 1152
Alw26I	GTCTC	2 cut(s)	297, 1565
AlwI	GGATC	5 cut(s)	614, 627, 1013, 1270, 1476
Ama87I	CYCGRG	1 cut(s)	233
Aor13HI	TCCGGA	1 cut(s)	1223
AoxI	GGCC	4 cut(s)	102, 137, 199, 1533
ApeKI	GCWGC	4 cut(s)	91, 401, 476, 1441
ApoI	RAATTY	1 cut(s)	176
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	3 cut(s)	138, 199, 365
AsuC2I	CCSGG	2 cut(s)	37, 1457
AsuNHI	GCTAGC	1 cut(s)	785
AvaI	CYCGRG	1 cut(s)	233
AvaII	GGWCC	1 cut(s)	365
BamHI	GGATCC	1 cut(s)	619
BanII	GRGCYC	2 cut(s)	234, 567
BbsI	GAAGAC	2 cut(s)	17, 1611
Bbv12I	GWGCWC	3 cut(s)	234, 567, 1152
BbvI	GCAGC	4 cut(s)	103, 413, 463, 1453
BccI	CCATC	4 cut(s)	68, 428, 491, 1348
BceAI	ACGGC	1 cut(s)	331
BcgI	CGANNNNNNTGC	2 cut(s)	455, 489
BciT130I	CCWGG	3 cut(s)	602, 963, 1026
BciVI	GTATCC	1 cut(s)	900
BcnI	CCSGG	2 cut(s)	37, 1457
BcoDI	GTCTC	2 cut(s)	297, 1565
BfaI	CTAG	3 cut(s)	419, 786, 1202
BfmI	CTRYAG	1 cut(s)	477
BfuI	GTATCC	1 cut(s)	900
BisI	GCNGC	7 cut(s)	92, 102, 115, 402, 477, 1266, 1442
BlsI	GCNGC	7 cut(s)	93, 103, 116, 403, 478, 1267, 1443
Bme1390I	CCNGG	5 cut(s)	37, 602, 963, 1026, 1457
Bme18I	GGWCC	1 cut(s)	365
BmeT110I	CYCGRG	1 cut(s)	233
BmgT120I	GGNCC	3 cut(s)	138, 199, 365
BmiI	GGNNCC	4 cut(s)	621, 717, 814, 1248
BmrFI	CCNGG	5 cut(s)	37, 602, 963, 1026, 1457
BmrI	ACTGGG	1 cut(s)	1189
BmsI	GCATC	8 cut(s)	346, 601, 798, 1093, 1360, 1409, 1550, 1615
BmtI	GCTAGC	1 cut(s)	789
BmuI	ACTGGG	1 cut(s)	1189
BpiI	GAAGAC	2 cut(s)	17, 1611
BpmI	CTGGAG	1 cut(s)	1047
BpuEI	CTTGAG	2 cut(s)	104, 356
BpuMI	CCSGG	2 cut(s)	37, 1457
BsaBI	GATNNNNATC	1 cut(s)	1392
BsaJI	CCNNGG	4 cut(s)	186, 962, 1024, 1536
BsaWI	WCCGGW	1 cut(s)	1223
Bsc4I	CCNNNNNNNGG	4 cut(s)	187, 607, 899, 962
Bse1I	ACTGG	2 cut(s)	181, 1184
Bse3DI	GCAATG	3 cut(s)	471, 667, 1416
Bse8I	GATNNNNATC	1 cut(s)	1392
BseAI	TCCGGA	1 cut(s)	1223
BseBI	CCWGG	3 cut(s)	602, 963, 1026
BseDI	CCNNGG	4 cut(s)	186, 962, 1024, 1536
BseJI	GATNNNNATC	1 cut(s)	1392
BseLI	CCNNNNNNNGG	4 cut(s)	187, 607, 899, 962
BseMI	GCAATG	3 cut(s)	471, 667, 1416
BseMII	CTCAG	6 cut(s)	455, 600, 1536, 1569, 1578, 1602
BseNI	ACTGG	2 cut(s)	181, 1184
BseRI	GAGGAG	3 cut(s)	574, 1311, 1361
BseXI	GCAGC	4 cut(s)	103, 413, 463, 1453
BseYI	CCCAGC	1 cut(s)	1437
Bsh1236I	CGCG	2 cut(s)	62, 1086
BshFI	GGCC	4 cut(s)	104, 139, 201, 1535
BsiHKAI	GWGCWC	3 cut(s)	234, 567, 1152
BsiHKCI	CYCGRG	1 cut(s)	233
BsiSI	CCGG	3 cut(s)	36, 1224, 1457
BslFI	GGGAC	4 cut(s)	400, 521, 552, 1439
BslI	CCNNNNNNNGG	4 cut(s)	187, 607, 899, 962
BsmAI	GTCTC	2 cut(s)	297, 1565
BsmFI	GGGAC	4 cut(s)	400, 521, 552, 1439
BsnI	GGCC	4 cut(s)	104, 139, 201, 1535
BsoBI	CYCGRG	1 cut(s)	233
Bsp1286I	GDGCHC	3 cut(s)	234, 567, 1152
Bsp13I	TCCGGA	1 cut(s)	1223
Bsp1407I	TGTACA	1 cut(s)	126
Bsp143I	GATC	4 cut(s)	619, 1005, 1275, 1468
BspACI	CCGC	9 cut(s)	67, 101, 115, 151, 494, 623, 720, 758, 1265
BspANI	GGCC	4 cut(s)	104, 139, 201, 1535
BspCNI	CTCAG	6 cut(s)	454, 599, 1537, 1570, 1579, 1603
BspEI	TCCGGA	1 cut(s)	1223
BspFNI	CGCG	2 cut(s)	62, 1086
BspLI	GGNNCC	4 cut(s)	621, 717, 814, 1248
BspMAI	CTGCAG	1 cut(s)	481
BspOI	GCTAGC	1 cut(s)	789
BspPI	GGATC	5 cut(s)	614, 627, 1013, 1270, 1476
BsrDI	GCAATG	3 cut(s)	471, 667, 1416
BsrGI	TGTACA	1 cut(s)	126
BsrI	ACTGG	2 cut(s)	181, 1184
BssECI	CCNNGG	4 cut(s)	186, 962, 1024, 1536
BssMI	GATC	4 cut(s)	619, 1005, 1275, 1468
BssT1I	CCWWGG	1 cut(s)	186
Bst2UI	CCWGG	3 cut(s)	602, 963, 1026
Bst4CI	ACNGT	1 cut(s)	109
Bst6I	CTCTTC	1 cut(s)	300
BstAPI	GCANNNNNTGC	1 cut(s)	782
BstAUI	TGTACA	1 cut(s)	126
BstC8I	GCNNGC	4 cut(s)	487, 563, 787, 864
BstENI	CCTNNNNNAGG	1 cut(s)	960
BstFNI	CGCG	2 cut(s)	62, 1086
BstHHI	GCGC	1 cut(s)	114
BstKTI	GATC	4 cut(s)	622, 1008, 1278, 1471
BstMAI	GTCTC	2 cut(s)	297, 1565
BstMBI	GATC	4 cut(s)	619, 1005, 1275, 1468
BstMWI	GCNNNNNNNGC	6 cut(s)	428, 482, 491, 782, 1083, 1412
BstNI	CCWGG	3 cut(s)	602, 963, 1026
BstNSI	RCATGY	1 cut(s)	247
BstSCI	CCNGG	5 cut(s)	35, 600, 961, 1024, 1455
BstSFI	CTRYAG	1 cut(s)	477
BstUI	CGCG	2 cut(s)	62, 1086
BstV1I	GCAGC	4 cut(s)	103, 413, 463, 1453
BstV2I	GAAGAC	2 cut(s)	17, 1611
BstX2I	RGATCY	3 cut(s)	619, 1005, 1468
BstYI	RGATCY	3 cut(s)	619, 1005, 1468
BsuI	GTATCC	1 cut(s)	900
BsuRI	GGCC	4 cut(s)	104, 139, 201, 1535
BtsI	GCAGTG	1 cut(s)	923
BtsIMutI	CAGTG	2 cut(s)	831, 923
Cac8I	GCNNGC	4 cut(s)	487, 563, 787, 864
CfoI	GCGC	1 cut(s)	114
Cfr13I	GGNCC	3 cut(s)	138, 199, 365
CseI	GACGC	3 cut(s)	68, 374, 1075
Csp6I	GTAC	4 cut(s)	127, 630, 1067, 1082
CspCI	CAANNNNNGTGG	2 cut(s)	855, 890
CviAII	CATG	5 cut(s)	244, 289, 782, 1283, 1523
CviQI	GTAC	4 cut(s)	127, 630, 1067, 1082
DpnI	GATC	4 cut(s)	621, 1007, 1277, 1470
DpnII	GATC	4 cut(s)	619, 1005, 1275, 1468
EaeI	YGGCCR	1 cut(s)	102
Eam1104I	CTCTTC	1 cut(s)	300
EarI	CTCTTC	1 cut(s)	300
EciI	GGCGGA	1 cut(s)	773
Ecl136II	GAGCTC	2 cut(s)	232, 565
Eco130I	CCWWGG	1 cut(s)	186
Eco24I	GRGCYC	2 cut(s)	234, 567
Eco47I	GGWCC	1 cut(s)	365
Eco53kI	GAGCTC	2 cut(s)	232, 565
Eco57I	CTGAAG	2 cut(s)	1091, 1092
Eco88I	CYCGRG	1 cut(s)	233
EcoICRI	GAGCTC	2 cut(s)	232, 565
EcoNI	CCTNNNNNAGG	1 cut(s)	960
EcoRI	GAATTC	1 cut(s)	176
EcoRII	CCWGG	3 cut(s)	600, 961, 1024
EcoT14I	CCWWGG	1 cut(s)	186
EcoT22I	ATGCAT	1 cut(s)	361
EcoT38I	GRGCYC	2 cut(s)	234, 567
ErhI	CCWWGG	1 cut(s)	186
FaeI	CATG	5 cut(s)	247, 292, 785, 1286, 1526
FalI	AAGNNNNNCTT	2 cut(s)	992, 1024
FaqI	GGGAC	4 cut(s)	400, 521, 552, 1439
FatI	CATG	5 cut(s)	243, 288, 781, 1282, 1522
FauI	CCCGC	1 cut(s)	727
FblI	GTMKAC	1 cut(s)	579
Fnu4HI	GCNGC	7 cut(s)	92, 102, 115, 402, 477, 1266, 1442
FriOI	GRGCYC	2 cut(s)	234, 567
Fsp4HI	GCNGC	7 cut(s)	92, 102, 115, 402, 477, 1266, 1442
FspBI	CTAG	3 cut(s)	419, 786, 1202
GlaI	GCGC	1 cut(s)	113
GluI	GCNGC	7 cut(s)	92, 102, 115, 402, 477, 1266, 1442
GsaI	CCCAGC	1 cut(s)	1441
GsuI	CTGGAG	1 cut(s)	1047
HaeIII	GGCC	4 cut(s)	104, 139, 201, 1535
HapII	CCGG	3 cut(s)	36, 1224, 1457
HgaI	GACGC	3 cut(s)	68, 374, 1075
HhaI	GCGC	1 cut(s)	114
Hin1II	CATG	5 cut(s)	247, 292, 785, 1286, 1526
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HindIII	AAGCTT	1 cut(s)	1229
HinfI	GANTC	8 cut(s)	238, 413, 581, 688, 879, 1049, 1496, 1559
HpaII	CCGG	3 cut(s)	36, 1224, 1457
Hpy166II	GTNNAC	3 cut(s)	28, 548, 580
Hpy8I	GTNNAC	3 cut(s)	28, 548, 580
HpyAV	CCTTC	8 cut(s)	199, 265, 529, 827, 1066, 1231, 1486, 1523
HpyCH4III	ACNGT	1 cut(s)	109
HpyCH4IV	ACGT	3 cut(s)	30, 550, 1640
HpyF10VI	GCNNNNNNNGC	6 cut(s)	428, 482, 491, 782, 1083, 1412
HpySE526I	ACGT	3 cut(s)	30, 550, 1640
Hsp92II	CATG	5 cut(s)	247, 292, 785, 1286, 1526
HspAI	GCGC	1 cut(s)	112
Kpn2I	TCCGGA	1 cut(s)	1223
Kzo9I	GATC	4 cut(s)	619, 1005, 1275, 1468
LmnI	GCTCC	3 cut(s)	208, 958, 1348
Lsp1109I	GCAGC	4 cut(s)	103, 413, 463, 1453
LweI	GCATC	8 cut(s)	346, 601, 798, 1093, 1360, 1409, 1550, 1615
MaeI	CTAG	3 cut(s)	419, 786, 1202
MaeII	ACGT	3 cut(s)	30, 550, 1640
MaeIII	GTNAC	5 cut(s)	146, 224, 638, 854, 1087
MalI	GATC	4 cut(s)	621, 1007, 1277, 1470
MboI	GATC	4 cut(s)	619, 1005, 1275, 1468
MboII	GAAGA	7 cut(s)	19, 22, 91, 287, 289, 1000, 1611
MflI	RGATCY	3 cut(s)	619, 1005, 1468
MhlI	GDGCHC	3 cut(s)	234, 567, 1152
MluCI	AATT	6 cut(s)	176, 281, 406, 836, 867, 1334
MluI	ACGCGT	1 cut(s)	1084
MlyI	GAGTC	3 cut(s)	422, 575, 1043
MmeI	TCCRAC	2 cut(s)	791, 880
Mph1103I	ATGCAT	1 cut(s)	361
MroI	TCCGGA	1 cut(s)	1223
MseI	TTAA	4 cut(s)	300, 698, 848, 1140
MspA1I	CMGCKG	1 cut(s)	1265
MspI	CCGG	3 cut(s)	36, 1224, 1457
MspR9I	CCNGG	5 cut(s)	37, 602, 963, 1026, 1457
MvaI	CCWGG	3 cut(s)	602, 963, 1026
MvnI	CGCG	2 cut(s)	62, 1086
MwoI	GCNNNNNNNGC	6 cut(s)	428, 482, 491, 782, 1083, 1412
NciI	CCSGG	2 cut(s)	37, 1457
NdeII	GATC	4 cut(s)	619, 1005, 1275, 1468
NheI	GCTAGC	1 cut(s)	785
NlaIII	CATG	5 cut(s)	247, 292, 785, 1286, 1526
NlaIV	GGNNCC	4 cut(s)	621, 717, 814, 1248
NmeAIII	GCCGAG	1 cut(s)	1561
NmuCI	GTSAC	4 cut(s)	146, 224, 854, 1087
NsiI	ATGCAT	1 cut(s)	361
NspI	RCATGY	1 cut(s)	247
PaeR7I	CTCGAG	1 cut(s)	233
PciI	ACATGT	1 cut(s)	243
PfeI	GAWTC	5 cut(s)	238, 688, 879, 1496, 1559
PflMI	CCANNNNNTGG	1 cut(s)	607
PfoI	TCCNGGA	1 cut(s)	35
PkrI	GCNGC	7 cut(s)	93, 103, 116, 403, 478, 1267, 1443
PleI	GAGTC	3 cut(s)	421, 575, 1043
PpsI	GAGTC	3 cut(s)	421, 575, 1043
PscI	ACATGT	1 cut(s)	243
PsiI	TTATAA	1 cut(s)	1476
Psp124BI	GAGCTC	2 cut(s)	234, 567
Psp1406I	AACGTT	1 cut(s)	30
Psp6I	CCWGG	3 cut(s)	600, 961, 1024
PspFI	CCCAGC	1 cut(s)	1437
PspGI	CCWGG	3 cut(s)	600, 961, 1024
PspN4I	GGNNCC	4 cut(s)	621, 717, 814, 1248
PspPI	GGNCC	3 cut(s)	138, 199, 365
PstI	CTGCAG	1 cut(s)	481
PsuI	RGATCY	3 cut(s)	619, 1005, 1468
RsaI	GTAC	4 cut(s)	128, 631, 1068, 1083
RsaNI	GTAC	4 cut(s)	127, 630, 1067, 1082
SacI	GAGCTC	2 cut(s)	234, 567
SaqAI	TTAA	4 cut(s)	300, 698, 848, 1140
SatI	GCNGC	7 cut(s)	92, 102, 115, 402, 477, 1266, 1442
Sau3AI	GATC	4 cut(s)	619, 1005, 1275, 1468
Sau96I	GGNCC	3 cut(s)	138, 199, 365
SchI	GAGTC	3 cut(s)	422, 575, 1043
ScrFI	CCNGG	5 cut(s)	37, 602, 963, 1026, 1457
SduI	GDGCHC	3 cut(s)	234, 567, 1152
SfaNI	GCATC	8 cut(s)	346, 601, 798, 1093, 1360, 1409, 1550, 1615
SfcI	CTRYAG	1 cut(s)	477
Sfr274I	CTCGAG	1 cut(s)	233
SinI	GGWCC	1 cut(s)	365
SlaI	CTCGAG	1 cut(s)	233
SmlI	CTYRAG	3 cut(s)	119, 233, 335
SmoI	CTYRAG	3 cut(s)	119, 233, 335
Sse9I	AATT	6 cut(s)	176, 281, 406, 836, 867, 1334
SsiI	CCGC	9 cut(s)	67, 101, 115, 151, 494, 623, 720, 758, 1265
SspMI	CTAG	3 cut(s)	419, 786, 1202
SstI	GAGCTC	2 cut(s)	234, 567
StyD4I	CCNGG	5 cut(s)	35, 600, 961, 1024, 1455
StyI	CCWWGG	1 cut(s)	186
TaaI	ACNGT	1 cut(s)	109
TaiI	ACGT	3 cut(s)	33, 553, 1643
TaqI	TCGA	1 cut(s)	234
TasI	AATT	6 cut(s)	176, 281, 406, 836, 867, 1334
TatI	WGTACW	2 cut(s)	126, 1066
TauI	GCSGC	3 cut(s)	104, 117, 1268
TfiI	GAWTC	5 cut(s)	238, 688, 879, 1496, 1559
Tru1I	TTAA	4 cut(s)	300, 698, 848, 1140
Tru9I	TTAA	4 cut(s)	300, 698, 848, 1140
TscAI	CASTG	2 cut(s)	831, 930
TseFI	GTSAC	4 cut(s)	146, 224, 854, 1087
TseI	GCWGC	4 cut(s)	91, 401, 476, 1441
Tsp45I	GTSAC	4 cut(s)	146, 224, 854, 1087
TspDTI	ATGAA	7 cut(s)	154, 317, 770, 1377, 1422, 1463, 1650
TspGWI	ACGGA	2 cut(s)	86, 1520
TspRI	CASTG	2 cut(s)	831, 930
Van91I	CCANNNNNTGG	1 cut(s)	607
VpaK11BI	GGWCC	1 cut(s)	365
XagI	CCTNNNNNAGG	1 cut(s)	960
XapI	RAATTY	1 cut(s)	176
XceI	RCATGY	1 cut(s)	247
XcmI	CCANNNNNNNNNTGG	1 cut(s)	193
XhoI	CTCGAG	1 cut(s)	233
XmiI	GTMKAC	1 cut(s)	579
XspI	CTAG	3 cut(s)	419, 786, 1202
Zsp2I	ATGCAT	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.