Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0007984

Physical Location & Seq

Genomic Coordinates Forward (+)

55905129 .. 55909472

Gene Structure 4344 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00375010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGACGAAGAAGACAGAGAGGAAAGTGAACGTTTCCGGGAGGCCGAAGCACTCTCTGGACGCGAACCGTACGGATGGGAAGAACAAAGAGCAGCGTAGTGCGGCCACCGTGCGCCGCCTCAAGATGTACAAGGTCAGGCCCAAGCGTGACGTCAAGGGCAAGTTCATCAGCAACGAATTCCAGTCCAAGGAGTTGCCCAACACTCGAATCCAACCCGATCGCCGCTGGTTCGGGAATACTAGGGTTGTGGGCCAGAAGGAGCTTCAAGTCTTTCGTGACGAGCTCGAGAATCACATGTCTAACAGATACAATGTGATTTTGAAGGAGAAGAAATTGCCCACGTCTCTTCTTAATGACCATAACAAGCAATCAAGAGTTCATCTGCTTGAGAGAGAGCCGTTTTCCGATGCATTTGGACCTAAGACAAAGAGGAAGCGTCCAAAACTCTTGGCAGCCAATTACGAGTCCCTAGCTAAGAAAGCCGATGGTTCTCAGGATGTGTTTGAGCAGAAGCACGATGACATTGCTGCAGAAGCAGGCGAAGCGGATGGATTTAGGGACTTGGTTCGCCATACAATGTTTGAGAAGGGACAGAGTAAACGTATTTGGGGCGAGCTCTACAAAGTGGTAGACTCCTCAGATGTTGTTGTCCAGGTTTTGGATGCAAGGGATCCGCAAGGTACAAGATGTTACCACTTAGAGAAGCATTTGAAAGAGCATTGCAAGCATAAACACTTGATTCTCTTGTTAAACAAGTGTAACAATATCAGTACTTTTATCTCCAGTGTGATTTGGTTCCCGCTTGGGGTTCCCGCTTGGGCAACAAAAGGTTGGCTAAAAGTATTGTCGGCGGAGTTTCCAACTCTTGCATTTCATGCTAGCATCAACAAGTCATTTGGCAAGGGTTCTCTTCTATCTGTGTTGAGGCAATTTTCCCGATTAAAAAGTGACAAGCAAGCAATTTCTGTGGGATTCGTTGGGTATCCCAATGTTGGAAAGTCATCTGTTATCAACACACTGCGAACGAAAAATGTTTGCAAGGTTGCTCCTATTCCAGGGGAAACTAAAGTGTGGCAATATATAACACTCACAAAGAGGATATTCTTGATTGACTGCCCCGGAGTTGTCTATCAAACCAACGACTCTGAAACAGATATTGTACTGAAGGGCGTGGTACGTGTCACAAACTTGCAGGATGCTTCAGAACACATAGGAGAAGTATTGAAACGAGTTAAGAAAGAGCACTTGCAAAGAGCATATAAGATAAAAGACTGGTATGATGCTTTTCTGTCTGATGAATTTGATGTTAGTATCCCGGATCCTAACGTGGTTTTGTTGTTCAGGGAGGATGATAATGACTTTCTAGTTCAGCTATGCAAATCATCCGGAAAGCTTTTGAAGGGTGGCGAACCTGACCTGATGACAGCGGCAAAGATGATCCTTCATGATTGGCAGAGGGGTAAGATACCATTTTTTGTGCCTCCTCCACAAAGAGAATTGCCATCAGGGGAGCATCCTGCCAATGAAGTAGAAAACGATACACTAATAGATAATAATCAAGCATCAGCATTTAGAGCCATTGCAAATGTTATTTCATCCCAGCAGCAAATGAGTGTCCCAGTTCAAAGGGATCTTTATAACGAAAATGAGTTGAAGGGTTCCAAGACGGAGAACCTTCCTGAACATGATGTTGAGGCTGAGACATCTGAGAAGTCTGAGGCCTTGGAGGATGAGGTGTCTGAGCAGTCTTGTGACGCAGAAGATGAGACGTCCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0042254 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NGP1NT

Protein Analysis

592

Amino Acids

67.41

Weight (kDa)

8.82

Isoelectric Point (pI)

40.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NGP1NT	PF08153	42 - 166	2.4e-45	NGP1NT (NUC091) domain
MMR_HSR1	PF01926	323 - 385	8.4e-16	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52980
fragaria_vesca	FvH4_5g29580 FvH4_5g29580
malus_domestica	MD00G1089700.v1.1 MD03G1224500.v1.1 MD10G1052400.v1.1
prunus_persica	Prupe.4G184700_v2.0.a1
pyrus_communis	pycom10g03710 pycom11g21460
rosa_chinensis	RchiOBHm_Chr7g0222551
rosa_laevigata	RLG00000002045
rosa_multiflora	Rmu_sc0000312.1_g000002 Rmu_sc0011862.1_g000002 Rmu_ssc0000146.1_g000030
rosa_roxburghii	Rroxscaffold_3G00236670 Rroxscaffold_5G00375010
rosa_rugosa	Rorug07G0210800
rosa_samantha	Rh7AG353900 Rh7BG342700 Rh7CG371400 Rh7DG349200
rosa_wichuraiana	Rw0G020100 Rw7G029770 Rw7G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1638
AatII	GACGTC	2 cut(s)	153, 1772
AccB7I	CCANNNNNTGG	1 cut(s)	658
AccI	GTMKAC	1 cut(s)	630
AccII	CGCG	1 cut(s)	62
AccIII	TCCGGA	1 cut(s)	1385
AciI	CCGC	9 cut(s)	101, 115, 223, 545, 674, 800, 813, 851, 1427
AclI	AACGTT	1 cut(s)	30
AclWI	GGATC	6 cut(s)	665, 678, 1313, 1326, 1432, 1638
AcoI	YGGCCR	1 cut(s)	102
AcsI	RAATTY	2 cut(s)	176, 1298
AcuI	CTGAAG	2 cut(s)	1184, 1185
AcyI	GRCGYC	2 cut(s)	150, 1769
AfaI	GTAC	6 cut(s)	70, 128, 682, 772, 1161, 1176
AfiI	CCNNNNNNNGG	5 cut(s)	187, 658, 805, 992, 1055
AflIII	ACRYGT	2 cut(s)	294, 1177
AgsI	TTSAA	7 cut(s)	266, 322, 712, 1225, 1399, 1625, 1654
AjiI	CACGTC	1 cut(s)	342
AjnI	CCWGG	2 cut(s)	651, 1054
AluBI	AGCT	6 cut(s)	262, 283, 473, 616, 1372, 1393
AluI	AGCT	6 cut(s)	262, 283, 473, 616, 1372, 1393
Alw21I	GWGCWC	3 cut(s)	285, 618, 1245
Alw26I	GTCTC	3 cut(s)	348, 1694, 1760
AlwI	GGATC	6 cut(s)	665, 678, 1313, 1326, 1432, 1638
Ama87I	CYCGRG	1 cut(s)	284
Aor13HI	TCCGGA	1 cut(s)	1385
AoxI	GGCC	5 cut(s)	41, 102, 137, 250, 1719
ApeKI	GCWGC	4 cut(s)	91, 452, 527, 1603
ApoI	RAATTY	2 cut(s)	176, 1298
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	3 cut(s)	138, 250, 416
AsuC2I	CCSGG	3 cut(s)	37, 1119, 1316
AsuNHI	GCTAGC	1 cut(s)	878
AvaI	CYCGRG	1 cut(s)	284
AvaII	GGWCC	1 cut(s)	416
BamHI	GGATCC	2 cut(s)	670, 1318
BanII	GRGCYC	2 cut(s)	285, 618
BbsI	GAAGAC	1 cut(s)	17
Bbv12I	GWGCWC	3 cut(s)	285, 618, 1245
BbvI	GCAGC	4 cut(s)	103, 464, 514, 1615
BccI	CCATC	4 cut(s)	68, 479, 542, 1510
BceAI	ACGGC	1 cut(s)	382
BcgI	CGANNNNNNTGC	2 cut(s)	506, 540
BciT130I	CCWGG	2 cut(s)	653, 1056
BciVI	GTATCC	2 cut(s)	993, 1322
BcnI	CCSGG	3 cut(s)	37, 1119, 1316
BcoDI	GTCTC	3 cut(s)	348, 1694, 1760
BfaI	CTAG	4 cut(s)	240, 470, 879, 1364
BfmI	CTRYAG	1 cut(s)	528
BfuI	GTATCC	2 cut(s)	993, 1322
BisI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1428, 1604
BlsI	GCNGC	8 cut(s)	93, 103, 116, 224, 454, 529, 1429, 1605
BmcAI	AGTACT	1 cut(s)	772
Bme1390I	CCNGG	5 cut(s)	37, 653, 1056, 1119, 1316
Bme18I	GGWCC	1 cut(s)	416
BmeT110I	CYCGRG	1 cut(s)	284
BmgBI	CACGTC	1 cut(s)	342
BmgT120I	GGNCC	3 cut(s)	138, 250, 416
BmiI	GGNNCC	5 cut(s)	672, 797, 810, 1320, 1660
BmrFI	CCNGG	5 cut(s)	37, 653, 1056, 1119, 1316
BmrI	ACTGGG	1 cut(s)	1613
BmsI	GCATC	7 cut(s)	397, 652, 891, 1186, 1270, 1522, 1571
BmtI	GCTAGC	1 cut(s)	882
BmuI	ACTGGG	1 cut(s)	1613
BpiI	GAAGAC	1 cut(s)	17
BpmI	CTGGAG	1 cut(s)	766
BpuEI	CTTGAG	2 cut(s)	104, 407
BpuMI	CCSGG	3 cut(s)	37, 1119, 1316
BsaAI	YACGTR	1 cut(s)	1178
BsaBI	GATNNNNATC	1 cut(s)	1554
BsaHI	GRCGYC	2 cut(s)	150, 1769
BsaJI	CCNNGG	4 cut(s)	186, 1055, 1117, 1722
BsaWI	WCCGGW	1 cut(s)	1385
Bsc4I	CCNNNNNNNGG	5 cut(s)	187, 658, 805, 992, 1055
Bse1I	ACTGG	4 cut(s)	181, 783, 1277, 1619
Bse3DI	GCAATG	3 cut(s)	522, 718, 1578
Bse8I	GATNNNNATC	1 cut(s)	1554
BseAI	TCCGGA	1 cut(s)	1385
BseBI	CCWGG	2 cut(s)	653, 1056
BseDI	CCNNGG	4 cut(s)	186, 1055, 1117, 1722
BseJI	GATNNNNATC	1 cut(s)	1554
BseLI	CCNNNNNNNGG	5 cut(s)	187, 658, 805, 992, 1055
BseMI	GCAATG	3 cut(s)	522, 718, 1578
BseMII	CTCAG	6 cut(s)	506, 651, 1689, 1698, 1707, 1731
BseNI	ACTGG	4 cut(s)	181, 783, 1277, 1619
BseRI	GAGGAG	2 cut(s)	625, 1473
BseXI	GCAGC	4 cut(s)	103, 464, 514, 1615
BseYI	CCCAGC	1 cut(s)	1599
Bsh1236I	CGCG	1 cut(s)	62
Bsh1285I	CGRYCG	1 cut(s)	220
BshFI	GGCC	5 cut(s)	43, 104, 139, 252, 1721
BsiEI	CGRYCG	1 cut(s)	220
BsiHKAI	GWGCWC	3 cut(s)	285, 618, 1245
BsiHKCI	CYCGRG	1 cut(s)	284
BsiSI	CCGG	4 cut(s)	36, 1119, 1316, 1386
BsiWI	CGTACG	1 cut(s)	68
BslFI	GGGAC	4 cut(s)	451, 572, 603, 1601
BslI	CCNNNNNNNGG	5 cut(s)	187, 658, 805, 992, 1055
BsmAI	GTCTC	3 cut(s)	348, 1694, 1760
BsmBI	CGTCTC	2 cut(s)	348, 1760
BsmFI	GGGAC	4 cut(s)	451, 572, 603, 1601
BsnI	GGCC	5 cut(s)	43, 104, 139, 252, 1721
BsoBI	CYCGRG	1 cut(s)	284
Bsp1286I	GDGCHC	3 cut(s)	285, 618, 1245
Bsp13I	TCCGGA	1 cut(s)	1385
Bsp1407I	TGTACA	1 cut(s)	126
Bsp143I	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
BspACI	CCGC	9 cut(s)	101, 115, 223, 545, 674, 800, 813, 851, 1427
BspANI	GGCC	5 cut(s)	43, 104, 139, 252, 1721
BspCNI	CTCAG	6 cut(s)	505, 650, 1690, 1699, 1708, 1732
BspEI	TCCGGA	1 cut(s)	1385
BspFNI	CGCG	1 cut(s)	62
BspHI	TCATGA	1 cut(s)	1444
BspLI	GGNNCC	5 cut(s)	672, 797, 810, 1320, 1660
BspMAI	CTGCAG	1 cut(s)	532
BspOI	GCTAGC	1 cut(s)	882
BspPI	GGATC	6 cut(s)	665, 678, 1313, 1326, 1432, 1638
BsrDI	GCAATG	3 cut(s)	522, 718, 1578
BsrGI	TGTACA	1 cut(s)	126
BsrI	ACTGG	4 cut(s)	181, 783, 1277, 1619
BssECI	CCNNGG	4 cut(s)	186, 1055, 1117, 1722
BssMI	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
BssNI	GRCGYC	2 cut(s)	150, 1769
BssT1I	CCWWGG	2 cut(s)	186, 1722
Bst2UI	CCWGG	2 cut(s)	653, 1056
Bst4CI	ACNGT	2 cut(s)	68, 109
Bst6I	CTCTTC	2 cut(s)	351, 915
BstACI	GRCGYC	2 cut(s)	150, 1769
BstAPI	GCANNNNNTGC	1 cut(s)	875
BstAUI	TGTACA	1 cut(s)	126
BstBAI	YACGTR	1 cut(s)	1178
BstC8I	GCNNGC	5 cut(s)	538, 614, 725, 880, 957
BstDEI	CTNAG	9 cut(s)	420, 474, 492, 637, 697, 1698, 1707, 1716, 1740
BstENI	CCTNNNNNAGG	1 cut(s)	1053
BstFNI	CGCG	1 cut(s)	62
BstHHI	GCGC	1 cut(s)	114
BstKTI	GATC	5 cut(s)	220, 673, 1321, 1440, 1633
BstMAI	GTCTC	3 cut(s)	348, 1694, 1760
BstMBI	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
BstMCI	CGRYCG	1 cut(s)	220
BstMWI	GCNNNNNNNGC	6 cut(s)	479, 533, 542, 724, 875, 1574
BstNI	CCWGG	2 cut(s)	653, 1056
BstNSI	RCATGY	1 cut(s)	298
BstSCI	CCNGG	5 cut(s)	35, 651, 1054, 1117, 1314
BstSFI	CTRYAG	1 cut(s)	528
BstUI	CGCG	1 cut(s)	62
BstV1I	GCAGC	4 cut(s)	103, 464, 514, 1615
BstV2I	GAAGAC	1 cut(s)	17
BstX2I	RGATCY	3 cut(s)	670, 1318, 1630
BstYI	RGATCY	3 cut(s)	670, 1318, 1630
BsuI	GTATCC	2 cut(s)	993, 1322
BsuRI	GGCC	5 cut(s)	43, 104, 139, 252, 1721
BtrI	CACGTC	1 cut(s)	342
BtsI	GCAGTG	1 cut(s)	1016
BtsIMutI	CAGTG	2 cut(s)	790, 1016
Cac8I	GCNNGC	5 cut(s)	538, 614, 725, 880, 957
CciI	TCATGA	1 cut(s)	1444
CfoI	GCGC	1 cut(s)	114
Cfr13I	GGNCC	3 cut(s)	138, 250, 416
CseI	GACGC	3 cut(s)	68, 425, 1763
Csp6I	GTAC	6 cut(s)	69, 127, 681, 771, 1160, 1175
CspCI	CAANNNNNGTGG	2 cut(s)	948, 983
CviAII	CATG	4 cut(s)	295, 875, 1445, 1685
CviQI	GTAC	6 cut(s)	69, 127, 681, 771, 1160, 1175
DdeI	CTNAG	9 cut(s)	420, 474, 492, 637, 697, 1698, 1707, 1716, 1740
DpnI	GATC	5 cut(s)	219, 672, 1320, 1439, 1632
DpnII	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
EaeI	YGGCCR	1 cut(s)	102
Eam1104I	CTCTTC	2 cut(s)	351, 915
EarI	CTCTTC	2 cut(s)	351, 915
EciI	GGCGGA	1 cut(s)	866
Ecl136II	GAGCTC	2 cut(s)	283, 616
Eco130I	CCWWGG	2 cut(s)	186, 1722
Eco147I	AGGCCT	1 cut(s)	1721
Eco24I	GRGCYC	2 cut(s)	285, 618
Eco47I	GGWCC	1 cut(s)	416
Eco53kI	GAGCTC	2 cut(s)	283, 616
Eco57I	CTGAAG	2 cut(s)	1184, 1185
Eco88I	CYCGRG	1 cut(s)	284
EcoICRI	GAGCTC	2 cut(s)	283, 616
EcoNI	CCTNNNNNAGG	1 cut(s)	1053
EcoRI	GAATTC	1 cut(s)	176
EcoRII	CCWGG	2 cut(s)	651, 1054
EcoT14I	CCWWGG	2 cut(s)	186, 1722
EcoT22I	ATGCAT	1 cut(s)	412
EcoT38I	GRGCYC	2 cut(s)	285, 618
ErhI	CCWWGG	2 cut(s)	186, 1722
Esp3I	CGTCTC	2 cut(s)	348, 1760
FaeI	CATG	4 cut(s)	298, 878, 1448, 1688
FaqI	GGGAC	4 cut(s)	451, 572, 603, 1601
FatI	CATG	4 cut(s)	294, 874, 1444, 1684
FauI	CCCGC	2 cut(s)	807, 820
FblI	GTMKAC	1 cut(s)	630
Fnu4HI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1428, 1604
FriOI	GRGCYC	2 cut(s)	285, 618
Fsp4HI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1428, 1604
FspBI	CTAG	4 cut(s)	240, 470, 879, 1364
GlaI	GCGC	1 cut(s)	113
GluI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1428, 1604
GsaI	CCCAGC	1 cut(s)	1603
GsuI	CTGGAG	1 cut(s)	766
HaeIII	GGCC	5 cut(s)	43, 104, 139, 252, 1721
HapII	CCGG	4 cut(s)	36, 1119, 1316, 1386
HgaI	GACGC	3 cut(s)	68, 425, 1763
HhaI	GCGC	1 cut(s)	114
Hin1I	GRCGYC	2 cut(s)	150, 1769
Hin1II	CATG	4 cut(s)	298, 878, 1448, 1688
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HindIII	AAGCTT	1 cut(s)	1391
HinfI	GANTC	7 cut(s)	207, 289, 464, 632, 739, 972, 1142
HpaII	CCGG	4 cut(s)	36, 1119, 1316, 1386
Hpy166II	GTNNAC	3 cut(s)	28, 599, 631
Hpy188I	TCNGA	9 cut(s)	406, 640, 1147, 1204, 1294, 1708, 1717, 1741, 1774
Hpy8I	GTNNAC	3 cut(s)	28, 599, 631
HpyAV	CCTTC	8 cut(s)	250, 316, 580, 1159, 1393, 1451, 1648, 1685
HpyCH4III	ACNGT	2 cut(s)	68, 109
HpyCH4IV	ACGT	7 cut(s)	30, 150, 341, 601, 1177, 1326, 1769
HpyF10VI	GCNNNNNNNGC	6 cut(s)	479, 533, 542, 724, 875, 1574
HpyF3I	CTNAG	9 cut(s)	420, 474, 492, 637, 697, 1698, 1707, 1716, 1740
HpySE526I	ACGT	7 cut(s)	30, 150, 341, 601, 1177, 1326, 1769
Hsp92I	GRCGYC	2 cut(s)	150, 1769
Hsp92II	CATG	4 cut(s)	298, 878, 1448, 1688
HspAI	GCGC	1 cut(s)	112
Kpn2I	TCCGGA	1 cut(s)	1385
Kzo9I	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
LmnI	GCTCC	3 cut(s)	259, 1051, 1510
Lsp1109I	GCAGC	4 cut(s)	103, 464, 514, 1615
LweI	GCATC	7 cut(s)	397, 652, 891, 1186, 1270, 1522, 1571
MaeI	CTAG	4 cut(s)	240, 470, 879, 1364
MaeII	ACGT	7 cut(s)	30, 150, 341, 601, 1177, 1326, 1769
MaeIII	GTNAC	7 cut(s)	146, 275, 689, 758, 947, 1180, 1751
MalI	GATC	5 cut(s)	219, 672, 1320, 1439, 1632
MboI	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
MboII	GAAGA	7 cut(s)	19, 22, 91, 338, 340, 902, 1772
MflI	RGATCY	3 cut(s)	670, 1318, 1630
MhlI	GDGCHC	3 cut(s)	285, 618, 1245
MluCI	AATT	7 cut(s)	176, 332, 457, 929, 960, 1298, 1496
MlyI	GAGTC	3 cut(s)	473, 626, 1136
MmeI	TCCRAC	3 cut(s)	235, 884, 973
Mph1103I	ATGCAT	1 cut(s)	412
MroI	TCCGGA	1 cut(s)	1385
MseI	TTAA	4 cut(s)	351, 749, 941, 1233
MspA1I	CMGCKG	2 cut(s)	225, 1427
MspI	CCGG	4 cut(s)	36, 1119, 1316, 1386
MspR9I	CCNGG	5 cut(s)	37, 653, 1056, 1119, 1316
MvaI	CCWGG	2 cut(s)	653, 1056
MvnI	CGCG	1 cut(s)	62
MwoI	GCNNNNNNNGC	6 cut(s)	479, 533, 542, 724, 875, 1574
NciI	CCSGG	3 cut(s)	37, 1119, 1316
NdeII	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
NheI	GCTAGC	1 cut(s)	878
NlaIII	CATG	4 cut(s)	298, 878, 1448, 1688
NlaIV	GGNNCC	5 cut(s)	672, 797, 810, 1320, 1660
NmuCI	GTSAC	5 cut(s)	146, 275, 947, 1180, 1751
NsiI	ATGCAT	1 cut(s)	412
NspI	RCATGY	1 cut(s)	298
PaeR7I	CTCGAG	1 cut(s)	284
PagI	TCATGA	1 cut(s)	1444
PceI	AGGCCT	1 cut(s)	1721
PciI	ACATGT	1 cut(s)	294
PfeI	GAWTC	4 cut(s)	207, 289, 739, 972
Pfl23II	CGTACG	1 cut(s)	68
PflMI	CCANNNNNTGG	1 cut(s)	658
PfoI	TCCNGGA	2 cut(s)	35, 1314
PkrI	GCNGC	8 cut(s)	93, 103, 116, 224, 454, 529, 1429, 1605
Ple19I	CGATCG	1 cut(s)	220
PleI	GAGTC	3 cut(s)	472, 626, 1136
PpsI	GAGTC	3 cut(s)	472, 626, 1136
Ppu21I	YACGTR	1 cut(s)	1178
PscI	ACATGT	1 cut(s)	294
PsiI	TTATAA	1 cut(s)	1638
Psp124BI	GAGCTC	2 cut(s)	285, 618
Psp1406I	AACGTT	1 cut(s)	30
Psp6I	CCWGG	2 cut(s)	651, 1054
PspFI	CCCAGC	1 cut(s)	1599
PspGI	CCWGG	2 cut(s)	651, 1054
PspLI	CGTACG	1 cut(s)	68
PspN4I	GGNNCC	5 cut(s)	672, 797, 810, 1320, 1660
PspPI	GGNCC	3 cut(s)	138, 250, 416
PstI	CTGCAG	1 cut(s)	532
PsuI	RGATCY	3 cut(s)	670, 1318, 1630
PvuI	CGATCG	1 cut(s)	220
RsaI	GTAC	6 cut(s)	70, 128, 682, 772, 1161, 1176
RsaNI	GTAC	6 cut(s)	69, 127, 681, 771, 1160, 1175
SacI	GAGCTC	2 cut(s)	285, 618
SaqAI	TTAA	4 cut(s)	351, 749, 941, 1233
SatI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1428, 1604
Sau3AI	GATC	5 cut(s)	217, 670, 1318, 1437, 1630
Sau96I	GGNCC	3 cut(s)	138, 250, 416
ScaI	AGTACT	1 cut(s)	772
SchI	GAGTC	3 cut(s)	473, 626, 1136
ScrFI	CCNGG	5 cut(s)	37, 653, 1056, 1119, 1316
SduI	GDGCHC	3 cut(s)	285, 618, 1245
SfaNI	GCATC	7 cut(s)	397, 652, 891, 1186, 1270, 1522, 1571
SfcI	CTRYAG	1 cut(s)	528
Sfr274I	CTCGAG	1 cut(s)	284
SinI	GGWCC	1 cut(s)	416
SlaI	CTCGAG	1 cut(s)	284
SmlI	CTYRAG	3 cut(s)	119, 284, 386
SmoI	CTYRAG	3 cut(s)	119, 284, 386
Sse9I	AATT	7 cut(s)	176, 332, 457, 929, 960, 1298, 1496
SseBI	AGGCCT	1 cut(s)	1721
SsiI	CCGC	9 cut(s)	101, 115, 223, 545, 674, 800, 813, 851, 1427
SspMI	CTAG	4 cut(s)	240, 470, 879, 1364
SstI	GAGCTC	2 cut(s)	285, 618
StuI	AGGCCT	1 cut(s)	1721
StyD4I	CCNGG	5 cut(s)	35, 651, 1054, 1117, 1314
StyI	CCWWGG	2 cut(s)	186, 1722
TaaI	ACNGT	2 cut(s)	68, 109
TaiI	ACGT	7 cut(s)	33, 153, 344, 604, 1180, 1329, 1772
TaqI	TCGA	2 cut(s)	205, 285
TasI	AATT	7 cut(s)	176, 332, 457, 929, 960, 1298, 1496
TatI	WGTACW	3 cut(s)	126, 770, 1159
TauI	GCSGC	4 cut(s)	104, 117, 225, 1430
TfiI	GAWTC	4 cut(s)	207, 289, 739, 972
Tru1I	TTAA	4 cut(s)	351, 749, 941, 1233
Tru9I	TTAA	4 cut(s)	351, 749, 941, 1233
TscAI	CASTG	2 cut(s)	790, 1023
TseFI	GTSAC	5 cut(s)	146, 275, 947, 1180, 1751
TseI	GCWGC	4 cut(s)	91, 452, 527, 1603
Tsp45I	GTSAC	5 cut(s)	146, 275, 947, 1180, 1751
TspDTI	ATGAA	7 cut(s)	154, 368, 863, 1311, 1433, 1539, 1584
TspGWI	ACGGA	2 cut(s)	86, 1682
TspRI	CASTG	2 cut(s)	790, 1023
Van91I	CCANNNNNTGG	1 cut(s)	658
VpaK11BI	GGWCC	1 cut(s)	416
XagI	CCTNNNNNAGG	1 cut(s)	1053
XapI	RAATTY	2 cut(s)	176, 1298
XceI	RCATGY	1 cut(s)	298
XhoI	CTCGAG	1 cut(s)	284
XmiI	GTMKAC	1 cut(s)	630
XspI	CTAG	4 cut(s)	240, 470, 879, 1364
ZraI	GACGTC	2 cut(s)	151, 1770
ZrmI	AGTACT	1 cut(s)	772
Zsp2I	ATGCAT	1 cut(s)	412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.