Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0007984

Physical Location & Seq

Genomic Coordinates Forward (+)

6937250 .. 6938929

Gene Structure 1680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1052400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGTGAAGAAGACGGAGAGGAAAGTGAACATCTCTGGGAATCCGAAGCACTCTCTGGACGCAAATCGTTCCGATGGCAAGGTCAAGAACAAGGACGCGCGTACCGGCGCCACCGTCCGCCGCCTCCAGATGTACAACACTAGGCCCAAACGTAACCGCAAGGGAAAGGTCTTGAGGAACAAGTTCCAGTCCAAGGAGTTGCCTAACACTCGTATCCAGCCCGATCGCGGCCTGTTTGGGGTTACTCGGGCTGCGTCTCAGCAGCAGATCGACATTTTCCGTGAGGAGCACGGTAGGACGGGTTCAAGTAACTACAATGTTATTTTGAAGGAGAAGCAATTGCCATGGTCCCTCTTGAATGACCATCAGAAGCTAACCAGATTCCATCTTTTAGAGAGAGAGACATTTTCTAATGTCTTTGGACCTAAGACAAAGAGGAAACGTCCAAAGCTCCTCGCAGCAGATTATGAATCCTTAGCTAAGAAGGCTGATGTGTTTCAGGAGAAGCATGCTGCTGACAATGTTGTAGAAGGTAGTGAAACGGATGGATTTCGGGACCTGGTTCGGCATACAATGTTTGAGAAGGGCCAAAGTAAACGTATTTGGAGTGAGCTCTACAAAGTCATAGACTCTTCTGATGTGGTTGTCCAGGTTTTGGATGCAAGGGATCCACAAGGTACAAGATGCCACCACTTAGAGAAATATTTGAAAGAGCACTGCATGCATAAACACTTAATTCTTTTGTTAAACAAGTGTGATTTGATTCCTTCATGGGTGCTTAGACGCTGGTTGAACGTACTGAAGGCTGAATTTCCAACTATTGCATTTCATGCTAGCATCAATAAATCGTTTGGCAAGGGAACTCTTCTATCGGTTTTGAGACAATTCGCCCGTTTGAAAAGCGACAAGCAAGCAATTTCTGTTGGATTTGTTGGGTATCCCAATGTTGGAAAGTCATCTGTTATCAACACATTGCGAACTAAAAATGTTTGCAAAGTTGCTCCTATCCCAGGGGAGACTAAAGTGTGGCAGTATATAACACTTACAAAGAGGATTTTCTTGATTGATTGCCCTGGAGTTGTCTATCAAAGCGGTGACTCTGAAACAGATATCGTACTGAAGGGCGTGGTACGTGTCACAAATTTGCAGGATGCTACAGAACACATAGGAGAAGTTTTGAAACGAGTTCAAAAAATCCACCTGAAAAGAGCATATAAGATAGAGAAGTGGGAAGATGATAATGACTTCCTATGTCAGCTATGCAAATTGTCAGGCAAACTTTTGAAGGGTGGTGAACCCGACTTGATGACTGCAGCAAAGATGGTCCTCCACGACTGGCAGAGGGGTAAGATACCATTTTTTGTGCCGCCACCAAAAAGTGAATCATCAACCGGGGAGCCTGATACCAATCACAATAAAGATGACACTGTGGAAGATAACAATCAGGAGGCTGCTTATCGAGTCATTGGAGATATTATTTCATTTCAGAAGATCTGCACTATCCCGGTGCAAAGGGATCTTTTCAGTGAAGAAGAGTTAAATGGCGATGAGGGGCCTGAACAGCTTCCAGCCACTGAAGTATCTGAGAAGTCTCCGGAGTCGGATGATGAAATATCTGAGCAGTCACTGGACTTGGAGGATGACACGGCTGAACAGTCTGGAAATCCTAAACACATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0042254 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NGP1NT

Protein Analysis

560

Amino Acids

63.65

Weight (kDa)

9.11

Isoelectric Point (pI)

45.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NGP1NT	PF08153	44 - 167	5.1e-37	NGP1NT (NUC091) domain
MMR_HSR1	PF01926	308 - 390	7.1e-16	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52980
fragaria_vesca	FvH4_5g29580 FvH4_5g29580
malus_domestica	MD00G1089700.v1.1 MD03G1224500.v1.1 MD10G1052400.v1.1
prunus_persica	Prupe.4G184700_v2.0.a1
pyrus_communis	pycom10g03710 pycom11g21460
rosa_chinensis	RchiOBHm_Chr7g0222551
rosa_laevigata	RLG00000002045
rosa_multiflora	Rmu_sc0000312.1_g000002 Rmu_sc0011862.1_g000002 Rmu_ssc0000146.1_g000030
rosa_roxburghii	Rroxscaffold_3G00236670 Rroxscaffold_5G00375010
rosa_rugosa	Rorug07G0210800
rosa_samantha	Rh7AG353900 Rh7BG342700 Rh7CG371400 Rh7DG349200
rosa_wichuraiana	Rw0G020100 Rw7G029770 Rw7G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	107
AccB7I	CCANNNNNTGG	1 cut(s)	655
AccII	CGCG	3 cut(s)	98, 100, 228
AccIII	TCCGGA	1 cut(s)	1594
AciI	CCGC	6 cut(s)	118, 121, 157, 228, 1092, 1367
AclWI	GGATC	3 cut(s)	662, 675, 1524
AcsI	RAATTY	2 cut(s)	809, 1141
AcuI	CTGAAG	3 cut(s)	821, 1139, 1596
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	6 cut(s)	103, 134, 679, 798, 1116, 1131
AfiI	CCNNNNNNNGG	6 cut(s)	193, 227, 238, 655, 947, 1010
AflIII	ACRYGT	1 cut(s)	1132
AgsI	TTSAA	9 cut(s)	306, 328, 358, 709, 793, 898, 1180, 1190, 1285
AjnI	CCWGG	4 cut(s)	558, 648, 1009, 1072
AluBI	AGCT	6 cut(s)	373, 451, 479, 613, 1258, 1564
AluI	AGCT	6 cut(s)	373, 451, 479, 613, 1258, 1564
Alw21I	GWGCWC	3 cut(s)	291, 615, 717
Alw26I	GTCTC	5 cut(s)	261, 395, 874, 1010, 1596
AlwI	GGATC	3 cut(s)	662, 675, 1524
AlwNI	CAGNNNCTG	2 cut(s)	1574, 1627
Ama87I	CYCGRG	1 cut(s)	246
Aor13HI	TCCGGA	1 cut(s)	1594
AoxI	GGCC	4 cut(s)	143, 229, 586, 1553
ApeKI	GCWGC	6 cut(s)	251, 262, 458, 512, 1313, 1451
ApoI	RAATTY	2 cut(s)	809, 1141
Asp700I	GAANNNNTTC	2 cut(s)	182, 1563
AspLEI	GCGC	2 cut(s)	100, 110
AspS9I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1324, 1553
AsuC2I	CCSGG	2 cut(s)	1393, 1505
AsuHPI	GGTGA	3 cut(s)	16, 1106, 1304
AsuNHI	GCTAGC	1 cut(s)	833
AvaI	CYCGRG	1 cut(s)	246
AvaII	GGWCC	4 cut(s)	348, 422, 556, 1324
BaeI	ACNNNNGTAYC	6 cut(s)	85, 118, 196, 229, 1563, 1596
BamHI	GGATCC	1 cut(s)	667
BanI	GGYRCC	1 cut(s)	107
BanII	GRGCYC	1 cut(s)	615
BbsI	GAAGAC	1 cut(s)	17
Bbv12I	GWGCWC	3 cut(s)	291, 615, 717
BbvI	GCAGC	6 cut(s)	238, 274, 470, 499, 1325, 1438
BccI	CCATC	5 cut(s)	68, 372, 393, 539, 1315
BceAI	ACGGC	1 cut(s)	1662
BciT130I	CCWGG	4 cut(s)	560, 650, 1011, 1074
BciVI	GTATCC	2 cut(s)	224, 948
BcnI	CCSGG	2 cut(s)	1393, 1505
BcoDI	GTCTC	5 cut(s)	261, 395, 874, 1010, 1596
BfaI	CTAG	2 cut(s)	141, 834
BfmI	CTRYAG	2 cut(s)	1155, 1311
BfoI	RGCGCY	1 cut(s)	111
BfuI	GTATCC	2 cut(s)	224, 948
BglII	AGATCT	1 cut(s)	1491
BisI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1314, 1367, 1452
BlsI	GCNGC	9 cut(s)	122, 230, 253, 264, 460, 514, 1315, 1368, 1453
Bme1390I	CCNGG	6 cut(s)	560, 650, 1011, 1074, 1393, 1505
Bme18I	GGWCC	4 cut(s)	348, 422, 556, 1324
BmeT110I	CYCGRG	1 cut(s)	246
BmgT120I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1324, 1553
BmiI	GGNNCC	6 cut(s)	109, 350, 557, 669, 1398, 1554
BmrFI	CCNGG	6 cut(s)	560, 650, 1011, 1074, 1393, 1505
BmsI	GCATC	4 cut(s)	649, 674, 846, 1141
BmtI	GCTAGC	1 cut(s)	837
BpiI	GAAGAC	1 cut(s)	17
BpmI	CTGGAG	2 cut(s)	110, 1095
Bpu10I	CCTNAGC	1 cut(s)	475
BpuEI	CTTGAG	1 cut(s)	193
BpuMI	CCSGG	2 cut(s)	1393, 1505
BsaAI	YACGTR	1 cut(s)	1133
BsaBI	GATNNNNATC	2 cut(s)	1407, 1440
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	6 cut(s)	192, 344, 1009, 1010, 1072, 1392
BsaWI	WCCGGW	1 cut(s)	1594
Bsc4I	CCNNNNNNNGG	6 cut(s)	193, 227, 238, 655, 947, 1010
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	3 cut(s)	187, 1340, 1632
Bse3DI	GCAATG	1 cut(s)	971
Bse8I	GATNNNNATC	2 cut(s)	1407, 1440
BseAI	TCCGGA	1 cut(s)	1594
BseBI	CCWGG	4 cut(s)	560, 650, 1011, 1074
BseDI	CCNNGG	6 cut(s)	192, 344, 1009, 1010, 1072, 1392
BseGI	GGATG	5 cut(s)	550, 664, 1156, 1609, 1645
BseJI	GATNNNNATC	2 cut(s)	1407, 1440
BseLI	CCNNNNNNNGG	6 cut(s)	193, 227, 238, 655, 947, 1010
BseMI	GCAATG	1 cut(s)	971
BseMII	CTCAG	3 cut(s)	272, 1575, 1608
BseNI	ACTGG	3 cut(s)	187, 1340, 1632
BseRI	GAGGAG	2 cut(s)	299, 443
BseXI	GCAGC	6 cut(s)	238, 274, 470, 499, 1325, 1438
BsgI	GTGCAG	1 cut(s)	1480
Bsh1236I	CGCG	3 cut(s)	98, 100, 228
Bsh1285I	CGRYCG	1 cut(s)	226
BshFI	GGCC	4 cut(s)	145, 231, 588, 1555
BshNI	GGYRCC	1 cut(s)	107
BsiEI	CGRYCG	1 cut(s)	226
BsiHKAI	GWGCWC	3 cut(s)	291, 615, 717
BsiHKCI	CYCGRG	1 cut(s)	246
BsiSI	CCGG	4 cut(s)	105, 1392, 1505, 1595
BslFI	GGGAC	2 cut(s)	334, 569
BslI	CCNNNNNNNGG	6 cut(s)	193, 227, 238, 655, 947, 1010
BsmAI	GTCTC	5 cut(s)	261, 395, 874, 1010, 1596
BsmBI	CGTCTC	1 cut(s)	261
BsmFI	GGGAC	2 cut(s)	334, 569
BsnI	GGCC	4 cut(s)	145, 231, 588, 1555
BsoBI	CYCGRG	1 cut(s)	246
Bsp1286I	GDGCHC	3 cut(s)	291, 615, 717
Bsp13I	TCCGGA	1 cut(s)	1594
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	5 cut(s)	223, 267, 667, 1491, 1516
Bsp19I	CCATGG	1 cut(s)	344
BspACI	CCGC	6 cut(s)	118, 121, 157, 228, 1092, 1367
BspANI	GGCC	4 cut(s)	145, 231, 588, 1555
BspCNI	CTCAG	3 cut(s)	271, 1576, 1609
BspEI	TCCGGA	1 cut(s)	1594
BspFNI	CGCG	3 cut(s)	98, 100, 228
BspLI	GGNNCC	6 cut(s)	109, 350, 557, 669, 1398, 1554
BspMAI	CTGCAG	1 cut(s)	1315
BspOI	GCTAGC	1 cut(s)	837
BspPI	GGATC	3 cut(s)	662, 675, 1524
BspT107I	GGYRCC	1 cut(s)	107
BsrDI	GCAATG	1 cut(s)	971
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	3 cut(s)	187, 1340, 1632
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	6 cut(s)	192, 344, 1009, 1010, 1072, 1392
BssMI	GATC	5 cut(s)	223, 267, 667, 1491, 1516
BssNI	GRCGYC	1 cut(s)	108
BssT1I	CCWWGG	2 cut(s)	192, 344
Bst2UI	CCWGG	4 cut(s)	560, 650, 1011, 1074
Bst4CI	ACNGT	4 cut(s)	115, 293, 1429, 1656
Bst6I	CTCTTC	3 cut(s)	637, 870, 1527
BstACI	GRCGYC	1 cut(s)	108
BstAPI	GCANNNNNTGC	2 cut(s)	721, 830
BstAUI	TGTACA	1 cut(s)	132
BstBAI	YACGTR	1 cut(s)	1133
BstC8I	GCNNGC	4 cut(s)	510, 722, 835, 912
BstDEI	CTNAG	8 cut(s)	258, 426, 475, 480, 694, 779, 1584, 1617
BstDSI	CCRYGG	1 cut(s)	344
BstENI	CCTNNNNNAGG	1 cut(s)	1008
BstF5I	GGATG	5 cut(s)	550, 664, 1156, 1609, 1645
BstFNI	CGCG	3 cut(s)	98, 100, 228
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	2 cut(s)	100, 110
BstKTI	GATC	5 cut(s)	226, 270, 670, 1494, 1519
BstMAI	GTCTC	5 cut(s)	261, 395, 874, 1010, 1596
BstMBI	GATC	5 cut(s)	223, 267, 667, 1491, 1516
BstMCI	CGRYCG	1 cut(s)	226
BstMWI	GCNNNNNNNGC	4 cut(s)	485, 721, 830, 1561
BstNI	CCWGG	4 cut(s)	560, 650, 1011, 1074
BstNSI	RCATGY	2 cut(s)	512, 724
BstSCI	CCNGG	6 cut(s)	558, 648, 1009, 1072, 1391, 1503
BstSFI	CTRYAG	2 cut(s)	1155, 1311
BstUI	CGCG	3 cut(s)	98, 100, 228
BstV1I	GCAGC	6 cut(s)	238, 274, 470, 499, 1325, 1438
BstV2I	GAAGAC	1 cut(s)	17
BstX2I	RGATCY	3 cut(s)	667, 1491, 1516
BstYI	RGATCY	3 cut(s)	667, 1491, 1516
BsuI	GTATCC	2 cut(s)	224, 948
BsuRI	GGCC	4 cut(s)	145, 231, 588, 1555
BtgI	CCRYGG	1 cut(s)	344
BtgZI	GCGATG	1 cut(s)	1560
BtsCI	GGATG	5 cut(s)	550, 664, 1156, 1609, 1645
BtsI	GCAGTG	1 cut(s)	715
BtsIMutI	CAGTG	5 cut(s)	715, 1425, 1531, 1572, 1625
Cac8I	GCNNGC	4 cut(s)	510, 722, 835, 912
CaiI	CAGNNNCTG	2 cut(s)	1574, 1627
CfoI	GCGC	2 cut(s)	100, 110
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1324, 1553
CseI	GACGC	4 cut(s)	68, 104, 243, 792
CsiI	ACCWGGT	1 cut(s)	558
Csp6I	GTAC	6 cut(s)	102, 133, 678, 797, 1115, 1130
CviAII	CATG	5 cut(s)	345, 509, 721, 771, 830
CviQI	GTAC	6 cut(s)	102, 133, 678, 797, 1115, 1130
DdeI	CTNAG	8 cut(s)	258, 426, 475, 480, 694, 779, 1584, 1617
DinI	GGCGCC	1 cut(s)	109
DpnI	GATC	5 cut(s)	225, 269, 669, 1493, 1518
DpnII	GATC	5 cut(s)	223, 267, 667, 1491, 1516
Eam1104I	CTCTTC	3 cut(s)	637, 870, 1527
EarI	CTCTTC	3 cut(s)	637, 870, 1527
EciI	GGCGGA	1 cut(s)	107
Ecl136II	GAGCTC	1 cut(s)	613
Eco130I	CCWWGG	2 cut(s)	192, 344
Eco24I	GRGCYC	1 cut(s)	615
Eco32I	GATATC	1 cut(s)	1111
Eco47I	GGWCC	4 cut(s)	348, 422, 556, 1324
Eco53kI	GAGCTC	1 cut(s)	613
Eco57I	CTGAAG	3 cut(s)	821, 1139, 1596
Eco88I	CYCGRG	1 cut(s)	246
EcoICRI	GAGCTC	1 cut(s)	613
EcoNI	CCTNNNNNAGG	1 cut(s)	1008
EcoO109I	RGGNCCY	2 cut(s)	556, 1553
EcoRII	CCWGG	4 cut(s)	558, 648, 1009, 1072
EcoRV	GATATC	1 cut(s)	1111
EcoT14I	CCWWGG	2 cut(s)	192, 344
EcoT22I	ATGCAT	1 cut(s)	726
EcoT38I	GRGCYC	1 cut(s)	615
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	2 cut(s)	192, 344
Esp3I	CGTCTC	1 cut(s)	261
FaeI	CATG	5 cut(s)	348, 512, 724, 774, 833
FaqI	GGGAC	2 cut(s)	334, 569
FatI	CATG	5 cut(s)	344, 508, 720, 770, 829
Fnu4HI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1314, 1367, 1452
FokI	GGATG	5 cut(s)	557, 671, 1163, 1616, 1652
FriOI	GRGCYC	1 cut(s)	615
Fsp4HI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1314, 1367, 1452
FspBI	CTAG	2 cut(s)	141, 834
GlaI	GCGC	2 cut(s)	99, 109
GluI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1314, 1367, 1452
GsuI	CTGGAG	2 cut(s)	110, 1095
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	4 cut(s)	145, 231, 588, 1555
HapII	CCGG	4 cut(s)	105, 1392, 1505, 1595
HgaI	GACGC	4 cut(s)	68, 104, 243, 792
HhaI	GCGC	2 cut(s)	100, 110
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	5 cut(s)	348, 512, 724, 774, 833
Hin6I	GCGC	2 cut(s)	98, 108
HinP1I	GCGC	2 cut(s)	98, 108
HinfI	GANTC	9 cut(s)	40, 381, 470, 629, 763, 1097, 1382, 1461, 1598
HpaII	CCGG	4 cut(s)	105, 1392, 1505, 1595
HphI	GGTGA	3 cut(s)	16, 1106, 1304
Hpy166II	GTNNAC	3 cut(s)	28, 596, 1295
Hpy188I	TCNGA	9 cut(s)	45, 73, 369, 637, 1102, 1488, 1585, 1603, 1618
Hpy8I	GTNNAC	3 cut(s)	28, 596, 1295
HpyAV	CCTTC	8 cut(s)	322, 478, 524, 577, 777, 796, 1114, 1279
HpyCH4III	ACNGT	4 cut(s)	115, 293, 1429, 1656
HpyCH4IV	ACGT	5 cut(s)	151, 442, 598, 795, 1132
HpyF10VI	GCNNNNNNNGC	4 cut(s)	485, 721, 830, 1561
HpyF3I	CTNAG	8 cut(s)	258, 426, 475, 480, 694, 779, 1584, 1617
HpySE526I	ACGT	5 cut(s)	151, 442, 598, 795, 1132
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	5 cut(s)	348, 512, 724, 774, 833
HspAI	GCGC	2 cut(s)	98, 108
KasI	GGCGCC	1 cut(s)	107
Kpn2I	TCCGGA	1 cut(s)	1594
Kzo9I	GATC	5 cut(s)	223, 267, 667, 1491, 1516
LmnI	GCTCC	4 cut(s)	286, 456, 1006, 1396
Lsp1109I	GCAGC	6 cut(s)	238, 274, 470, 499, 1325, 1438
LweI	GCATC	4 cut(s)	649, 674, 846, 1141
MabI	ACCWGGT	1 cut(s)	558
MaeI	CTAG	2 cut(s)	141, 834
MaeII	ACGT	5 cut(s)	151, 442, 598, 795, 1132
MaeIII	GTNAC	6 cut(s)	152, 241, 308, 1094, 1135, 1623
MalI	GATC	5 cut(s)	225, 269, 669, 1493, 1518
MboI	GATC	5 cut(s)	223, 267, 667, 1491, 1516
MboII	GAAGA	9 cut(s)	19, 22, 624, 857, 1244, 1445, 1501, 1541, 1544
MfeI	CAATTG	1 cut(s)	338
MflI	RGATCY	3 cut(s)	667, 1491, 1516
MhlI	GDGCHC	3 cut(s)	291, 615, 717
MluCI	AATT	7 cut(s)	338, 735, 809, 884, 915, 1141, 1265
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	4 cut(s)	623, 1091, 1470, 1607
MmeI	TCCRAC	4 cut(s)	839, 904, 928, 1581
Mph1103I	ATGCAT	1 cut(s)	726
MroI	TCCGGA	1 cut(s)	1594
MroXI	GAANNNNTTC	2 cut(s)	182, 1563
MseI	TTAA	3 cut(s)	734, 746, 1538
MspI	CCGG	4 cut(s)	105, 1392, 1505, 1595
MspR9I	CCNGG	6 cut(s)	560, 650, 1011, 1074, 1393, 1505
MunI	CAATTG	1 cut(s)	338
MvaI	CCWGG	4 cut(s)	560, 650, 1011, 1074
MvnI	CGCG	3 cut(s)	98, 100, 228
MwoI	GCNNNNNNNGC	4 cut(s)	485, 721, 830, 1561
NarI	GGCGCC	1 cut(s)	108
NciI	CCSGG	2 cut(s)	1393, 1505
NcoI	CCATGG	1 cut(s)	344
NdeII	GATC	5 cut(s)	223, 267, 667, 1491, 1516
NheI	GCTAGC	1 cut(s)	833
NlaIII	CATG	5 cut(s)	348, 512, 724, 774, 833
NlaIV	GGNNCC	6 cut(s)	109, 350, 557, 669, 1398, 1554
NmuCI	GTSAC	3 cut(s)	1094, 1135, 1623
NsiI	ATGCAT	1 cut(s)	726
NspI	RCATGY	2 cut(s)	512, 724
PaeI	GCATGC	2 cut(s)	512, 724
PasI	CCCWGGG	1 cut(s)	1010
PdmI	GAANNNNTTC	2 cut(s)	182, 1563
PfeI	GAWTC	5 cut(s)	40, 381, 470, 763, 1382
PflMI	CCANNNNNTGG	1 cut(s)	655
PkrI	GCNGC	9 cut(s)	122, 230, 253, 264, 460, 514, 1315, 1368, 1453
Ple19I	CGATCG	1 cut(s)	226
PleI	GAGTC	4 cut(s)	623, 1091, 1469, 1606
PluTI	GGCGCC	1 cut(s)	111
PpsI	GAGTC	4 cut(s)	623, 1091, 1469, 1606
Ppu21I	YACGTR	1 cut(s)	1133
PpuMI	RGGWCCY	1 cut(s)	556
Psp124BI	GAGCTC	1 cut(s)	615
Psp5II	RGGWCCY	1 cut(s)	556
Psp6I	CCWGG	4 cut(s)	558, 648, 1009, 1072
PspGI	CCWGG	4 cut(s)	558, 648, 1009, 1072
PspN4I	GGNNCC	6 cut(s)	109, 350, 557, 669, 1398, 1554
PspPI	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1324, 1553
PspPPI	RGGWCCY	1 cut(s)	556
PsrI	GAACNNNNNNTAC	2 cut(s)	286, 318
PstI	CTGCAG	1 cut(s)	1315
PstNI	CAGNNNCTG	2 cut(s)	1574, 1627
PsuI	RGATCY	3 cut(s)	667, 1491, 1516
PvuI	CGATCG	1 cut(s)	226
RsaI	GTAC	6 cut(s)	103, 134, 679, 798, 1116, 1131
RsaNI	GTAC	6 cut(s)	102, 133, 678, 797, 1115, 1130
SacI	GAGCTC	1 cut(s)	615
SaqAI	TTAA	3 cut(s)	734, 746, 1538
SatI	GCNGC	9 cut(s)	121, 229, 252, 263, 459, 513, 1314, 1367, 1452
Sau3AI	GATC	5 cut(s)	223, 267, 667, 1491, 1516
Sau96I	GGNCC	7 cut(s)	144, 348, 422, 556, 586, 1324, 1553
SchI	GAGTC	4 cut(s)	623, 1091, 1470, 1607
ScrFI	CCNGG	6 cut(s)	560, 650, 1011, 1074, 1393, 1505
SduI	GDGCHC	3 cut(s)	291, 615, 717
SexAI	ACCWGGT	1 cut(s)	558
SfaNI	GCATC	4 cut(s)	649, 674, 846, 1141
SfcI	CTRYAG	2 cut(s)	1155, 1311
SfoI	GGCGCC	1 cut(s)	109
SinI	GGWCC	4 cut(s)	348, 422, 556, 1324
SmlI	CTYRAG	1 cut(s)	172
SmoI	CTYRAG	1 cut(s)	172
SphI	GCATGC	2 cut(s)	512, 724
Sse9I	AATT	7 cut(s)	338, 735, 809, 884, 915, 1141, 1265
SsiI	CCGC	6 cut(s)	118, 121, 157, 228, 1092, 1367
SspDI	GGCGCC	1 cut(s)	107
SspI	AATATT	1 cut(s)	704
SspMI	CTAG	2 cut(s)	141, 834
SstI	GAGCTC	1 cut(s)	615
StyD4I	CCNGG	6 cut(s)	558, 648, 1009, 1072, 1391, 1503
StyI	CCWWGG	2 cut(s)	192, 344
TaaI	ACNGT	4 cut(s)	115, 293, 1429, 1656
TaiI	ACGT	5 cut(s)	154, 445, 601, 798, 1135
TaqI	TCGA	2 cut(s)	270, 1459
TasI	AATT	7 cut(s)	338, 735, 809, 884, 915, 1141, 1265
TatI	WGTACW	1 cut(s)	132
TauI	GCSGC	3 cut(s)	123, 231, 1369
TfiI	GAWTC	5 cut(s)	40, 381, 470, 763, 1382
Tru1I	TTAA	3 cut(s)	734, 746, 1538
Tru9I	TTAA	3 cut(s)	734, 746, 1538
TscAI	CASTG	5 cut(s)	722, 1432, 1531, 1579, 1632
TseFI	GTSAC	3 cut(s)	1094, 1135, 1623
TseI	GCWGC	6 cut(s)	251, 262, 458, 512, 1313, 1451
Tsp45I	GTSAC	3 cut(s)	1094, 1135, 1623
TspDTI	ATGAA	5 cut(s)	483, 759, 818, 1470, 1623
TspGWI	ACGGA	3 cut(s)	29, 269, 557
TspRI	CASTG	5 cut(s)	722, 1432, 1531, 1579, 1632
Van91I	CCANNNNNTGG	1 cut(s)	655
VpaK11BI	GGWCC	4 cut(s)	348, 422, 556, 1324
XagI	CCTNNNNNAGG	1 cut(s)	1008
XapI	RAATTY	2 cut(s)	809, 1141
XceI	RCATGY	2 cut(s)	512, 724
XmnI	GAANNNNTTC	2 cut(s)	182, 1563
XspI	CTAG	2 cut(s)	141, 834
Zsp2I	ATGCAT	1 cut(s)	726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.