Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00906

Orthogroup ID

OG0007984

Physical Location & Seq

Genomic Coordinates Forward (+)

966 .. 5766

Gene Structure 4801 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G020100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGCAAACAATGCATTCTTTTCACTTGAAGTTCATGTGAAGGCCGGAGCAGCAACAGCACGTGACCGCAAGGGCAAGTTCATCAGCAACGAATTCCAGTCCAAGGAGTTTCCCAACACTCGAATCCAACCCGATCACCGCTGGTTCGGGAATACTAGGGTCGTGGGCCAGAAGGAGCTTGAAGTCTTTCGTAACGAGCTCGAGAATCACATGTCTAATAGATACAATGTGATTTTGAAGGAGAAGAAATTGCCCATGTCTCTTCTAAATGACCATAAGAAGAGTCAGAGAGAGCCGTTTTCCGATGCATTTGGACCTAAGACAAAGAGGAAGAGTCCAAAACTCTTGGCAAAGCACGATGACATTGCTGCAGAAGCAGGCGAAGCGGATGGATTTAGGGACTTGGTTCGCCATACAATGTTTGAGAAGGGACAGAGTAAACGTATTTGGGGCGAGCTCTACAAAGTGGTAGACTCCTCAGATGTTGTTGTCCAGGTTTTGGATGCAAGGGATCCGCAAGGTACAAGATGTTACCACTTAGAGAAGCATTTGAAAGAGCATTGCAAGCATAAACACTTGATTCTCTTGTTAAACAAGTGTGATTTGGTTCCAGTTTGGGCAACAAAAGGTTGGCTAAAAGTATTGTCGGCGGAGTTTCCAACTCTTGCATTTCATGCTAGCATCAACAAGTCATTTGGCAAGGGTTCTCTTCTATCTGTGTTGAGGCAATTTTCCCGATTAAAAAGTGACAAGCAAGCAATTTCTGTGGGATTTGTTCGGTATCCCAATGTTGGAAAGTCATCTGTTATCAACACACTGCGAACGAAAAATGTTTGCAAGGTTGCTCCTATTCCAGGGGAAACTAAAGTGTGGCAATATGTAACACTCACAAAGAGGATCTTCTTGATTGACTGCCCCGGAGTTGTCTATCAAACCAACGACTCTGAAACAGATATTGTACTGAAGGGCGTGGTACGTGTCACAAACTTGCAGGATGCTTCAGAACACATAGGAGAAGATATTGAAACGAATCCTAACGTGGTTTTATTGTTCTGGGAGGATGATAATGACTTTCTAGTTCAGCTATGCAAATCATCCGGAAAGCTTTTGAAGGGTGGGGAACCTGACCTGATGACAGCGGCAAAGATGATCCTCCATGATTGGCAGAGGGGTAAGATACCATTTTTTGTGCCTCCTCCACAAAGAGAATTGCCATCAGGGGAGCATCCTGCCAATGAAGTAGAAAACGATACACTAATAGATAATAATCAAGCATCAGCATTTAGAGCCATTGCAAATGTTATTTCATCCCAGCAGCAAATGAGTGTCCCGGTTCAAAGGGATCTTTATAACGAAAATGAGTTGAAGGGTTCTAAGACGGCTGAGGCTGAACATGATGTTGAGGCTGAGACATCTGAGAAGTCTGACGCAGAAGATGAGACGTCCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0042254 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NGP1NT

Protein Analysis

483

Amino Acids

54.61

Weight (kDa)

7.27

Isoelectric Point (pI)

32.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NGP1NT	PF08153	19 - 118	1.7e-35	NGP1NT (NUC091) domain
MMR_HSR1	PF01926	256 - 315	1.1e-13	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52980
fragaria_vesca	FvH4_5g29580 FvH4_5g29580
malus_domestica	MD00G1089700.v1.1 MD03G1224500.v1.1 MD10G1052400.v1.1
prunus_persica	Prupe.4G184700_v2.0.a1
pyrus_communis	pycom10g03710 pycom11g21460
rosa_chinensis	RchiOBHm_Chr7g0222551
rosa_laevigata	RLG00000002045
rosa_multiflora	Rmu_sc0000312.1_g000002 Rmu_sc0011862.1_g000002 Rmu_ssc0000146.1_g000030
rosa_roxburghii	Rroxscaffold_3G00236670 Rroxscaffold_5G00375010
rosa_rugosa	Rorug07G0210800
rosa_samantha	Rh7AG353900 Rh7BG342700 Rh7CG371400 Rh7DG349200
rosa_wichuraiana	Rw0G020100 Rw7G029770 Rw7G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1350
AatII	GACGTC	1 cut(s)	1445
AccB7I	CCANNNNNTGG	1 cut(s)	499
AccI	GTMKAC	1 cut(s)	471
AccIII	TCCGGA	1 cut(s)	1097
AciI	CCGC	6 cut(s)	67, 139, 386, 515, 650, 1139
AclWI	GGATC	5 cut(s)	506, 519, 905, 1144, 1350
AcsI	RAATTY	1 cut(s)	92
AcuI	CTGAAG	2 cut(s)	983, 984
AcvI	CACGTG	1 cut(s)	62
AcyI	GRCGYC	1 cut(s)	1442
AfaI	GTAC	3 cut(s)	523, 960, 975
AfiI	CCNNNNNNNGG	4 cut(s)	103, 499, 791, 854
AflIII	ACRYGT	2 cut(s)	210, 976
AgsI	TTSAA	8 cut(s)	29, 182, 238, 553, 1025, 1111, 1337, 1366
AjnI	CCWGG	2 cut(s)	492, 853
AluBI	AGCT	5 cut(s)	178, 199, 457, 1084, 1105
AluI	AGCT	5 cut(s)	178, 199, 457, 1084, 1105
Alw21I	GWGCWC	2 cut(s)	201, 459
Alw26I	GTCTC	3 cut(s)	264, 1403, 1433
AlwI	GGATC	5 cut(s)	506, 519, 905, 1144, 1350
Ama87I	CYCGRG	1 cut(s)	200
Aor13HI	TCCGGA	1 cut(s)	1097
AoxI	GGCC	2 cut(s)	42, 166
ApeKI	GCWGC	3 cut(s)	50, 368, 1315
ApoI	RAATTY	1 cut(s)	92
Asp700I	GAANNNNTTC	1 cut(s)	186
AspS9I	GGNCC	2 cut(s)	166, 314
AsuC2I	CCSGG	2 cut(s)	918, 1331
AsuHPI	GGTGA	1 cut(s)	128
AsuNHI	GCTAGC	1 cut(s)	677
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	1 cut(s)	314
BamHI	GGATCC	1 cut(s)	511
BanII	GRGCYC	2 cut(s)	201, 459
BbrPI	CACGTG	1 cut(s)	62
Bbv12I	GWGCWC	2 cut(s)	201, 459
BbvCI	CCTCAGC	1 cut(s)	1383
BbvI	GCAGC	3 cut(s)	62, 355, 1327
BccI	CCATC	2 cut(s)	383, 1222
BceAI	ACGGC	2 cut(s)	280, 1395
BcgI	CGANNNNNNTGC	2 cut(s)	347, 381
BciT130I	CCWGG	2 cut(s)	494, 855
BciVI	GTATCC	1 cut(s)	792
BcnI	CCSGG	2 cut(s)	918, 1331
BcoDI	GTCTC	3 cut(s)	264, 1403, 1433
BfaI	CTAG	3 cut(s)	156, 678, 1076
BfmI	CTRYAG	1 cut(s)	369
BfuI	GTATCC	1 cut(s)	792
BisI	GCNGC	4 cut(s)	51, 369, 1140, 1316
BlsI	GCNGC	4 cut(s)	52, 370, 1141, 1317
Bme1390I	CCNGG	4 cut(s)	494, 855, 918, 1331
Bme18I	GGWCC	1 cut(s)	314
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	2 cut(s)	166, 314
BmiI	GGNNCC	3 cut(s)	513, 609, 1122
BmrFI	CCNGG	4 cut(s)	494, 855, 918, 1331
BmsI	GCATC	6 cut(s)	295, 493, 690, 985, 1234, 1283
BmtI	GCTAGC	1 cut(s)	681
Bpu10I	CCTNAGC	1 cut(s)	1383
BpuMI	CCSGG	2 cut(s)	918, 1331
BsaAI	YACGTR	2 cut(s)	62, 977
BsaBI	GATNNNNATC	1 cut(s)	1266
BsaHI	GRCGYC	1 cut(s)	1442
BsaJI	CCNNGG	3 cut(s)	102, 854, 916
BsaWI	WCCGGW	1 cut(s)	1097
Bsc4I	CCNNNNNNNGG	4 cut(s)	103, 499, 791, 854
Bse1I	ACTGG	2 cut(s)	97, 611
Bse3DI	GCAATG	3 cut(s)	363, 559, 1290
Bse8I	GATNNNNATC	1 cut(s)	1266
BseAI	TCCGGA	1 cut(s)	1097
BseBI	CCWGG	2 cut(s)	494, 855
BseDI	CCNNGG	3 cut(s)	102, 854, 916
BseGI	GGATG	7 cut(s)	394, 508, 1000, 1066, 1094, 1225, 1307
BseJI	GATNNNNATC	1 cut(s)	1266
BseLI	CCNNNNNNNGG	4 cut(s)	103, 499, 791, 854
BseMI	GCAATG	3 cut(s)	363, 559, 1290
BseMII	CTCAG	4 cut(s)	492, 1374, 1398, 1407
BseNI	ACTGG	2 cut(s)	97, 611
BseRI	GAGGAG	2 cut(s)	466, 1185
BseXI	GCAGC	3 cut(s)	62, 355, 1327
BseYI	CCCAGC	1 cut(s)	1311
BshFI	GGCC	2 cut(s)	44, 168
BsiHKAI	GWGCWC	2 cut(s)	201, 459
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	4 cut(s)	45, 918, 1098, 1331
BslFI	GGGAC	3 cut(s)	413, 444, 1313
BslI	CCNNNNNNNGG	4 cut(s)	103, 499, 791, 854
BsmAI	GTCTC	3 cut(s)	264, 1403, 1433
BsmBI	CGTCTC	1 cut(s)	1433
BsmFI	GGGAC	3 cut(s)	413, 444, 1313
BsmI	GAATGC	1 cut(s)	14
BsnI	GGCC	2 cut(s)	44, 168
BsoBI	CYCGRG	1 cut(s)	200
Bsp1286I	GDGCHC	2 cut(s)	201, 459
Bsp13I	TCCGGA	1 cut(s)	1097
Bsp143I	GATC	5 cut(s)	133, 511, 897, 1149, 1342
BspACI	CCGC	6 cut(s)	67, 139, 386, 515, 650, 1139
BspANI	GGCC	2 cut(s)	44, 168
BspCNI	CTCAG	4 cut(s)	491, 1375, 1399, 1408
BspEI	TCCGGA	1 cut(s)	1097
BspLI	GGNNCC	3 cut(s)	513, 609, 1122
BspMAI	CTGCAG	1 cut(s)	373
BspOI	GCTAGC	1 cut(s)	681
BspPI	GGATC	5 cut(s)	506, 519, 905, 1144, 1350
BsrDI	GCAATG	3 cut(s)	363, 559, 1290
BsrI	ACTGG	2 cut(s)	97, 611
BssECI	CCNNGG	3 cut(s)	102, 854, 916
BssMI	GATC	5 cut(s)	133, 511, 897, 1149, 1342
BssNI	GRCGYC	1 cut(s)	1442
BssT1I	CCWWGG	1 cut(s)	102
Bst2UI	CCWGG	2 cut(s)	494, 855
Bst6I	CTCTTC	4 cut(s)	267, 275, 326, 714
BstACI	GRCGYC	1 cut(s)	1442
BstAPI	GCANNNNNTGC	2 cut(s)	11, 674
BstBAI	YACGTR	2 cut(s)	62, 977
BstC8I	GCNNGC	5 cut(s)	379, 455, 566, 679, 756
BstDEI	CTNAG	7 cut(s)	318, 478, 538, 1374, 1383, 1407, 1416
BstENI	CCTNNNNNAGG	1 cut(s)	852
BstF5I	GGATG	7 cut(s)	394, 508, 1000, 1066, 1094, 1225, 1307
BstKTI	GATC	5 cut(s)	136, 514, 900, 1152, 1345
BstMAI	GTCTC	3 cut(s)	264, 1403, 1433
BstMBI	GATC	5 cut(s)	133, 511, 897, 1149, 1342
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 50, 56, 374, 383, 565, 674, 1286
BstNI	CCWGG	2 cut(s)	494, 855
BstNSI	RCATGY	1 cut(s)	214
BstSCI	CCNGG	4 cut(s)	492, 853, 916, 1329
BstSFI	CTRYAG	1 cut(s)	369
BstV1I	GCAGC	3 cut(s)	62, 355, 1327
BstX2I	RGATCY	3 cut(s)	511, 897, 1342
BstYI	RGATCY	3 cut(s)	511, 897, 1342
BsuI	GTATCC	1 cut(s)	792
BsuRI	GGCC	2 cut(s)	44, 168
BtsCI	GGATG	7 cut(s)	394, 508, 1000, 1066, 1094, 1225, 1307
BtsI	GCAGTG	1 cut(s)	815
BtsIMutI	CAGTG	1 cut(s)	815
Cac8I	GCNNGC	5 cut(s)	379, 455, 566, 679, 756
Cfr13I	GGNCC	2 cut(s)	166, 314
CseI	GACGC	1 cut(s)	1436
Csp6I	GTAC	3 cut(s)	522, 959, 974
CspCI	CAANNNNNGTGG	2 cut(s)	747, 782
CviAII	CATG	6 cut(s)	35, 211, 256, 674, 1157, 1394
CviQI	GTAC	3 cut(s)	522, 959, 974
DdeI	CTNAG	7 cut(s)	318, 478, 538, 1374, 1383, 1407, 1416
DpnI	GATC	5 cut(s)	135, 513, 899, 1151, 1344
DpnII	GATC	5 cut(s)	133, 511, 897, 1149, 1342
Eam1104I	CTCTTC	4 cut(s)	267, 275, 326, 714
EarI	CTCTTC	4 cut(s)	267, 275, 326, 714
EciI	GGCGGA	1 cut(s)	665
Ecl136II	GAGCTC	2 cut(s)	199, 457
Eco130I	CCWWGG	1 cut(s)	102
Eco24I	GRGCYC	2 cut(s)	201, 459
Eco47I	GGWCC	1 cut(s)	314
Eco53kI	GAGCTC	2 cut(s)	199, 457
Eco57I	CTGAAG	2 cut(s)	983, 984
Eco72I	CACGTG	1 cut(s)	62
Eco88I	CYCGRG	1 cut(s)	200
EcoICRI	GAGCTC	2 cut(s)	199, 457
EcoNI	CCTNNNNNAGG	1 cut(s)	852
EcoRI	GAATTC	1 cut(s)	92
EcoRII	CCWGG	2 cut(s)	492, 853
EcoT14I	CCWWGG	1 cut(s)	102
EcoT22I	ATGCAT	2 cut(s)	16, 310
EcoT38I	GRGCYC	2 cut(s)	201, 459
ErhI	CCWWGG	1 cut(s)	102
Esp3I	CGTCTC	1 cut(s)	1433
FaeI	CATG	6 cut(s)	38, 214, 259, 677, 1160, 1397
FalI	AAGNNNNNCTT	2 cut(s)	884, 916
FaqI	GGGAC	3 cut(s)	413, 444, 1313
FatI	CATG	6 cut(s)	34, 210, 255, 673, 1156, 1393
FblI	GTMKAC	1 cut(s)	471
Fnu4HI	GCNGC	4 cut(s)	51, 369, 1140, 1316
FokI	GGATG	7 cut(s)	401, 515, 1007, 1073, 1081, 1212, 1294
FriOI	GRGCYC	2 cut(s)	201, 459
Fsp4HI	GCNGC	4 cut(s)	51, 369, 1140, 1316
FspBI	CTAG	3 cut(s)	156, 678, 1076
GluI	GCNGC	4 cut(s)	51, 369, 1140, 1316
GsaI	CCCAGC	1 cut(s)	1315
HaeIII	GGCC	2 cut(s)	44, 168
HapII	CCGG	4 cut(s)	45, 918, 1098, 1331
HgaI	GACGC	1 cut(s)	1436
Hin1I	GRCGYC	1 cut(s)	1442
Hin1II	CATG	6 cut(s)	38, 214, 259, 677, 1160, 1397
HindIII	AAGCTT	1 cut(s)	1103
HinfI	GANTC	8 cut(s)	123, 205, 283, 334, 473, 580, 941, 1030
HpaII	CCGG	4 cut(s)	45, 918, 1098, 1331
HphI	GGTGA	1 cut(s)	128
Hpy166II	GTNNAC	2 cut(s)	440, 472
Hpy188I	TCNGA	8 cut(s)	288, 304, 481, 946, 1003, 1417, 1426, 1447
Hpy188III	TCNNGA	5 cut(s)	148, 202, 735, 904, 1098
Hpy8I	GTNNAC	2 cut(s)	440, 472
HpyAV	CCTTC	7 cut(s)	34, 166, 232, 421, 958, 1105, 1360
HpyCH4IV	ACGT	5 cut(s)	61, 442, 976, 1038, 1442
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 50, 56, 374, 383, 565, 674, 1286
HpyF3I	CTNAG	7 cut(s)	318, 478, 538, 1374, 1383, 1407, 1416
HpySE526I	ACGT	5 cut(s)	61, 442, 976, 1038, 1442
Hsp92I	GRCGYC	1 cut(s)	1442
Hsp92II	CATG	6 cut(s)	38, 214, 259, 677, 1160, 1397
Kpn2I	TCCGGA	1 cut(s)	1097
Kzo9I	GATC	5 cut(s)	133, 511, 897, 1149, 1342
LmnI	GCTCC	4 cut(s)	47, 175, 850, 1222
Lsp1109I	GCAGC	3 cut(s)	62, 355, 1327
LweI	GCATC	6 cut(s)	295, 493, 690, 985, 1234, 1283
MaeI	CTAG	3 cut(s)	156, 678, 1076
MaeII	ACGT	5 cut(s)	61, 442, 976, 1038, 1442
MaeIII	GTNAC	6 cut(s)	62, 191, 530, 746, 880, 979
MalI	GATC	5 cut(s)	135, 513, 899, 1151, 1344
MboI	GATC	5 cut(s)	133, 511, 897, 1149, 1342
MboII	GAAGA	8 cut(s)	254, 256, 292, 343, 701, 892, 1028, 1445
MflI	RGATCY	3 cut(s)	511, 897, 1342
MhlI	GDGCHC	2 cut(s)	201, 459
MluCI	AATT	5 cut(s)	92, 248, 728, 759, 1208
MlyI	GAGTC	4 cut(s)	292, 343, 467, 935
MmeI	TCCRAC	3 cut(s)	151, 683, 772
Mph1103I	ATGCAT	2 cut(s)	16, 310
MroI	TCCGGA	1 cut(s)	1097
MroXI	GAANNNNTTC	1 cut(s)	186
MseI	TTAA	2 cut(s)	590, 740
MspA1I	CMGCKG	2 cut(s)	141, 1139
MspI	CCGG	4 cut(s)	45, 918, 1098, 1331
MspR9I	CCNGG	4 cut(s)	494, 855, 918, 1331
Mva1269I	GAATGC	1 cut(s)	14
MvaI	CCWGG	2 cut(s)	494, 855
MwoI	GCNNNNNNNGC	8 cut(s)	11, 50, 56, 374, 383, 565, 674, 1286
NciI	CCSGG	2 cut(s)	918, 1331
NdeII	GATC	5 cut(s)	133, 511, 897, 1149, 1342
NheI	GCTAGC	1 cut(s)	677
NlaIII	CATG	6 cut(s)	38, 214, 259, 677, 1160, 1397
NlaIV	GGNNCC	3 cut(s)	513, 609, 1122
NmuCI	GTSAC	3 cut(s)	62, 746, 979
NsiI	ATGCAT	2 cut(s)	16, 310
NspI	RCATGY	1 cut(s)	214
PaeR7I	CTCGAG	1 cut(s)	200
PciI	ACATGT	1 cut(s)	210
PctI	GAATGC	1 cut(s)	14
PdmI	GAANNNNTTC	1 cut(s)	186
PfeI	GAWTC	4 cut(s)	123, 205, 580, 1030
PflMI	CCANNNNNTGG	1 cut(s)	499
PkrI	GCNGC	4 cut(s)	52, 370, 1141, 1317
PleI	GAGTC	4 cut(s)	291, 342, 467, 935
PmaCI	CACGTG	1 cut(s)	62
PmlI	CACGTG	1 cut(s)	62
PpsI	GAGTC	4 cut(s)	291, 342, 467, 935
Ppu21I	YACGTR	2 cut(s)	62, 977
PscI	ACATGT	1 cut(s)	210
PsiI	TTATAA	1 cut(s)	1350
Psp124BI	GAGCTC	2 cut(s)	201, 459
Psp6I	CCWGG	2 cut(s)	492, 853
PspCI	CACGTG	1 cut(s)	62
PspFI	CCCAGC	1 cut(s)	1311
PspGI	CCWGG	2 cut(s)	492, 853
PspN4I	GGNNCC	3 cut(s)	513, 609, 1122
PspPI	GGNCC	2 cut(s)	166, 314
PstI	CTGCAG	1 cut(s)	373
PsuI	RGATCY	3 cut(s)	511, 897, 1342
RsaI	GTAC	3 cut(s)	523, 960, 975
RsaNI	GTAC	3 cut(s)	522, 959, 974
SacI	GAGCTC	2 cut(s)	201, 459
SaqAI	TTAA	2 cut(s)	590, 740
SatI	GCNGC	4 cut(s)	51, 369, 1140, 1316
Sau3AI	GATC	5 cut(s)	133, 511, 897, 1149, 1342
Sau96I	GGNCC	2 cut(s)	166, 314
SchI	GAGTC	4 cut(s)	292, 343, 467, 935
ScrFI	CCNGG	4 cut(s)	494, 855, 918, 1331
SduI	GDGCHC	2 cut(s)	201, 459
SfaNI	GCATC	6 cut(s)	295, 493, 690, 985, 1234, 1283
SfcI	CTRYAG	1 cut(s)	369
Sfr274I	CTCGAG	1 cut(s)	200
SinI	GGWCC	1 cut(s)	314
SlaI	CTCGAG	1 cut(s)	200
SmlI	CTYRAG	1 cut(s)	200
SmoI	CTYRAG	1 cut(s)	200
Sse9I	AATT	5 cut(s)	92, 248, 728, 759, 1208
SsiI	CCGC	6 cut(s)	67, 139, 386, 515, 650, 1139
SspMI	CTAG	3 cut(s)	156, 678, 1076
SstI	GAGCTC	2 cut(s)	201, 459
StyD4I	CCNGG	4 cut(s)	492, 853, 916, 1329
StyI	CCWWGG	1 cut(s)	102
TaiI	ACGT	5 cut(s)	64, 445, 979, 1041, 1445
TaqI	TCGA	2 cut(s)	121, 201
TasI	AATT	5 cut(s)	92, 248, 728, 759, 1208
TatI	WGTACW	1 cut(s)	958
TauI	GCSGC	1 cut(s)	1142
TfiI	GAWTC	4 cut(s)	123, 205, 580, 1030
Tru1I	TTAA	2 cut(s)	590, 740
Tru9I	TTAA	2 cut(s)	590, 740
TscAI	CASTG	1 cut(s)	822
TseFI	GTSAC	3 cut(s)	62, 746, 979
TseI	GCWGC	3 cut(s)	50, 368, 1315
Tsp45I	GTSAC	3 cut(s)	62, 746, 979
TspDTI	ATGAA	5 cut(s)	23, 70, 662, 1251, 1296
TspRI	CASTG	1 cut(s)	822
Van91I	CCANNNNNTGG	1 cut(s)	499
VpaK11BI	GGWCC	1 cut(s)	314
XagI	CCTNNNNNAGG	1 cut(s)	852
XapI	RAATTY	1 cut(s)	92
XceI	RCATGY	1 cut(s)	214
XhoI	CTCGAG	1 cut(s)	200
XmiI	GTMKAC	1 cut(s)	471
XmnI	GAANNNNTTC	1 cut(s)	186
XspI	CTAG	3 cut(s)	156, 678, 1076
ZraI	GACGTC	1 cut(s)	1443
Zsp2I	ATGCAT	2 cut(s)	16, 310

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.