Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0007984

Physical Location & Seq

Genomic Coordinates Forward (+)

24629546 .. 24636521

Gene Structure 6976 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g21460.21

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGGACGGATATTCGCGGTTAACCGCGGGTATTTTGCCCATCCCTAGAGGCACCTCTATAGAACAATTAAGGAGATTAGTACTAGATGAAACTTTGAGAGGAATATTTGGAAATAAATACATGATGCATGCATTTATGAATAATTATAAATTTTTATCGAAGAGTATATGTAAACCAAATTGTTGTACTAGCTTTATGTATATGTGTGTGTCTTGTACACTCCCTCTCATGGGATGGGAGACACAACCACCTTTCCGGTGGCTCTGGAGGTTTCAAGGTAGGCAAATGCTTCAACCATCTTCGAAAATGGTGCTTAATCTTCCCACTCTACAAAGTAAGGCTTCAGTTTCTCCAAGATTCAACGTGCTTTCCATTCTACACTCAACTTTGAGTTTCCTATCCGTAGTTATTAGATTATACTATATAGTGTTCCGACTCCTCCGGCCCCTCCCAAAACAAGGATGGAGTTACCGGCAGAAAACTCAGTTCTTTCGAGACCTTTGTACTGGCTCGATAGCCGGGGGCAGGCTAGCAGCTTCAGCAAAACTCAGATTTGGGGCTTGTGAGCTAATATGCTTCATCCCTCACCTTAAACTTGGACACTTCGCTTCCTACTTTCACAACCACACCAGCAACTCATACCCTGGAACTGACCAATGGAGAAAAAGTTCAAACAAACAATTTGTTGTGACGGACGGTTACAATACCTACTTTTGTGGAAAACAAACACATTTGGAAATAAAAATGACGATGTGTTCTCATTTTCTTATTACCGTGAAAATATCTCAAAAATTAGAAAAAGATAGGGAAAGGAGGGTGAAGCAAGCATCACCTCCTATAGGAGAAACTAAATTTGGGCTAAAATCGACATATTTTTCTCTAAAGTTTTATTTTAAAATTTTATTATTTTCATTTAAAAGAACCGATATCGATAATGGCTATTCATTCCTTTATTTAAATACTGAGTGTGATATGAGCCCAACTTTATTGGACCTCCATCAATCTCCGTCACACCGTCACTTTATAATTCCTCGTCTTCCACCTCCACTCTTCCTTTCCGAAACCCTAGTCGCAGGGTTTTGCGCAATTCAAAATCTCAGCCATTTCCCTCATTTTCTCGGCACCACCGCAAAGATGGTGAAGAAGACGGAGAGGAAGGTCAACATCTCCGGCAAGCCGAAGCACTCTCTGGATGCAAACCGTTCCGATGCCAAGGCCAAGAACAAGGACGCGCGTACCGGCGCCACTGTCCGCCGCCTCAAGATGTACAACACCAGGCCCAAGCGTAACAGCAAGGGAACGGTCCTGAGGAACGAGTTTCAGTCCAAGGAGCTGCCTAACACTCGTATCCAGCCTGATCGCCGCTGGTTTGGGAATACTCGGGTTGCGTCTCAGCAGCAGCTTGACATCTTCCGCGAGGAGCACAGTAGGACGGTTTCGAGTAATTACAATGTTATTTTGAAGGGGAAGCAATTGCCGTTGTCTCTCTTGAATGACCATCAGAAGCAAACCAGAGTTCATCTTCTAGAGAGAGAGACATTTTCTGATGTATTTGGACCCAAGACAAAGAGGAAACGTCCAAAGCTCCTCGCGGCAGATTATGAGTCCTTAGCTAAGAAGGCTGATGGTTCTCAGGATGTGTTTCAGGAGAAGCATGCTGATGATAGTGTTGTAGAAGGTAATGAAGCGGATGGATTTAGGGACCTAGTTCGGCATACAATGTTTGAGAAGGGCCAAAGTAAACGTATTTGGGGTGAGCTCTACAAAGTGATAGACTCTTCTGATGTGGTTGTCCAGGTTTTGGATGCAAGGGACCCACAAGGTACAAGATGCCACCACTTAGAGAAGCATTTGAAAGAGCATTGCACGCATAAACACTTAATTCTTTTGTTAAACAAGTGTGATTTGGTTCCTTCATGGGTGCTTAGCCGTTGGTTGAACGTATTAAAGGCTGAATTTCCAACTATTGCATTTCATGCTAGCGTCAATAAATCATTTGGCAAGGGAACTCTTCTATCAGTTTTGAGACAATTCGCCCGTTTGAAAAGTGACAAGCAGGCCATTTCTGTGGGATTTGTTGGGTATCCCAATGTTGGAAAGTCATCTGTTATCAACACATTGCGAACTAAAAATGTTTGCAAAGTTGCTCCTATCCCAGGGGAGACTAAAGTGTGGCAGTATATAACACTCACAAAGAGGATTTTCTTGATTGATTGCCCTGGAGTTGTCTATCAAAGCGGTGATTCTGAAACAGATATTGTACTGAAGGGCGTGGTACGTGTCACAAATTTGCAGGATGCTACAGAACACATAGGAGAAGTTCTAAAACGAGTTAAGAAGATCCACCTGAAAAGAGCATATAAGATAGACAACTGGGAGGATGATAATGACTTCCTGTGTCAGCTATGCAAATTGTCAGGCAAACTTTTGAAGGGTGGTGAACCCGACTTGATGACTGCAGCAAAGATGGTCCTCCACGACTGGCAGAGGGGTAAGATACCATTTTTTGTGCCGCCACCAAAAAGAGAATCGCCAACGGGGGAGCCTGATATAAATCACAATAAAGAAGACACTGTGGAAGATAACAATCAGGCTGCAGCTTATCGAGCCATTGGCGATATTATTGCATCTCAGAAGGTGAGCACTATCCCTGTGCAAAGGGAGATCGATCTTTTCAGTGAAGAAGAGTTAAAGGGCGATGAAGGACCCGAACAGCTCCCAGCCGCTGAAGTATCTGAGAAGTCTCCAGAGTCGGACGATGAAGTATCTAAGCACAGTGACTCCGAGGATGACGCGGCTGAACAGTCTGAGGATTCTGAAGACAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0042254 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NGP1NT

Protein Analysis

943

Amino Acids

107.49

Weight (kDa)

9.39

Isoelectric Point (pI)

48.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52980
fragaria_vesca	FvH4_5g29580 FvH4_5g29580
malus_domestica	MD00G1089700.v1.1 MD03G1224500.v1.1 MD10G1052400.v1.1
prunus_persica	Prupe.4G184700_v2.0.a1
pyrus_communis	pycom10g03710 pycom11g21460
rosa_chinensis	RchiOBHm_Chr7g0222551
rosa_laevigata	RLG00000002045
rosa_multiflora	Rmu_sc0000312.1_g000002 Rmu_sc0011862.1_g000002 Rmu_ssc0000146.1_g000030
rosa_roxburghii	Rroxscaffold_3G00236670 Rroxscaffold_5G00375010
rosa_rugosa	Rorug07G0210800
rosa_samantha	Rh7AG353900 Rh7BG342700 Rh7CG371400 Rh7DG349200
rosa_wichuraiana	Rw0G020100 Rw7G029770 Rw7G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	147, 1025
Acc16I	TGCGCA	1 cut(s)	1084
AccB1I	GGYRCC	3 cut(s)	50, 1121, 1241
AccB7I	CCANNNNNTGG	1 cut(s)	1801
AccII	CGCG	7 cut(s)	16, 26, 1232, 1234, 1416, 1592, 2795
AclWI	GGATC	1 cut(s)	2335
AcsI	RAATTY	5 cut(s)	149, 851, 897, 1955, 2287
AcuI	CTGAAG	4 cut(s)	327, 522, 2285, 2748
AcyI	GRCGYC	1 cut(s)	1242
AfaI	GTAC	9 cut(s)	81, 187, 217, 505, 1237, 1268, 1825, 2262, 2277
AfiI	CCNNNNNNNGG	8 cut(s)	229, 230, 458, 525, 839, 1801, 2093, 2156
AflIII	ACRYGT	1 cut(s)	2278
AjnI	CCWGG	5 cut(s)	643, 1274, 1794, 2155, 2218
AjuI	GAANNNNNNNTTGG	2 cut(s)	837, 869
AloI	GAACNNNNNNTCC	2 cut(s)	652, 684
Alw21I	GWGCWC	3 cut(s)	1425, 1761, 2645
Alw26I	GTCTC	8 cut(s)	233, 489, 1395, 1488, 1529, 2020, 2156, 2748
AlwI	GGATC	1 cut(s)	2335
AlwNI	CAGNNNCTG	1 cut(s)	2726
Ama87I	CYCGRG	1 cut(s)	1380
AoxI	GGCC	5 cut(s)	443, 1215, 1277, 1732, 2058
ApeKI	GCWGC	7 cut(s)	533, 1333, 1396, 1399, 2459, 2594, 2597
ApoI	RAATTY	5 cut(s)	149, 851, 897, 1955, 2287
ArsI	GACNNNNNNTTYG	2 cut(s)	1053, 1085
Asp700I	GAANNNNTTC	1 cut(s)	667
AspLEI	GCGC	3 cut(s)	1085, 1234, 1244
AsuC2I	CCSGG	1 cut(s)	520
AsuHPI	GGTGA	8 cut(s)	578, 822, 829, 1150, 1766, 2252, 2450, 2650
AsuII	TTCGAA	1 cut(s)	302
AsuNHI	GCTAGC	2 cut(s)	529, 1979
AvaI	CYCGRG	1 cut(s)	1380
AvaII	GGWCC	7 cut(s)	991, 1303, 1556, 1702, 1813, 2470, 2705
AxyI	CCTNAGG	1 cut(s)	1307
BaeI	ACNNNNGTAYC	4 cut(s)	1219, 1252, 1330, 1363
BanI	GGYRCC	3 cut(s)	50, 1121, 1241
BanII	GRGCYC	2 cut(s)	980, 1761
BbsI	GAAGAC	3 cut(s)	1028, 1151, 2574
Bbv12I	GWGCWC	3 cut(s)	1425, 1761, 2645
BbvI	GCAGC	7 cut(s)	545, 1320, 1408, 1411, 2471, 2581, 2609
BceAI	ACGGC	2 cut(s)	1462, 1914
BcgI	CGANNNNNNTGC	4 cut(s)	292, 326, 2606, 2640
BciT130I	CCWGG	5 cut(s)	645, 1276, 1796, 2157, 2220
BciVI	GTATCC	2 cut(s)	1358, 2094
BcnI	CCSGG	1 cut(s)	520
BcoDI	GTCTC	8 cut(s)	233, 489, 1395, 1488, 1529, 2020, 2156, 2748
BfaI	CTAG	8 cut(s)	45, 83, 189, 530, 1067, 1526, 1706, 1980
BfmI	CTRYAG	5 cut(s)	57, 837, 2301, 2457, 2595
BfoI	RGCGCY	1 cut(s)	1245
BfuI	GTATCC	2 cut(s)	1358, 2094
BlpI	GCTNAGC	1 cut(s)	1925
BmcAI	AGTACT	1 cut(s)	81
Bme1390I	CCNGG	6 cut(s)	520, 645, 1276, 1796, 2157, 2220
Bme18I	GGWCC	7 cut(s)	991, 1303, 1556, 1702, 1813, 2470, 2705
BmeT110I	CYCGRG	1 cut(s)	1380
BmrFI	CCNGG	6 cut(s)	520, 645, 1276, 1796, 2157, 2220
BmrI	ACTGGG	1 cut(s)	2383
BmsI	GCATC	8 cut(s)	114, 836, 1183, 1198, 1795, 1820, 2287, 2636
BmtI	GCTAGC	2 cut(s)	533, 1983
BmuI	ACTGGG	1 cut(s)	2383
BpiI	GAAGAC	3 cut(s)	1028, 1151, 2574
BpmI	CTGGAG	3 cut(s)	286, 2241, 2730
Bpu10I	CCTNAGC	1 cut(s)	1609
Bpu1102I	GCTNAGC	1 cut(s)	1925
Bpu14I	TTCGAA	1 cut(s)	302
BpuEI	CTTGAG	1 cut(s)	1244
BpuMI	CCSGG	1 cut(s)	520
Bsa29I	ATCGAT	2 cut(s)	930, 2667
BsaAI	YACGTR	1 cut(s)	2279
BsaBI	GATNNNNATC	2 cut(s)	2553, 2586
BsaHI	GRCGYC	1 cut(s)	1242
BsaI	GGTCTC	1 cut(s)	489
BsaJI	CCNNGG	9 cut(s)	24, 519, 643, 1212, 1326, 2155, 2156, 2218, 2784
BsaWI	WCCGGW	1 cut(s)	255
BsaXI	ACNNNNNCTCC	4 cut(s)	652, 682, 2765, 2795
Bsc4I	CCNNNNNNNGG	8 cut(s)	229, 230, 458, 525, 839, 1801, 2093, 2156
Bse118I	RCCGGY	2 cut(s)	471, 1238
Bse1I	ACTGG	3 cut(s)	511, 2378, 2486
Bse21I	CCTNAGG	1 cut(s)	1307
Bse3DI	GCAATG	2 cut(s)	1861, 2117
Bse8I	GATNNNNATC	2 cut(s)	2553, 2586
BseBI	CCWGG	5 cut(s)	645, 1276, 1796, 2157, 2220
BseCI	ATCGAT	2 cut(s)	930, 2667
BseDI	CCNNGG	9 cut(s)	24, 519, 643, 1212, 1326, 2155, 2156, 2218, 2784
BseJI	GATNNNNATC	2 cut(s)	2553, 2586
BseLI	CCNNNNNNNGG	8 cut(s)	229, 230, 458, 525, 839, 1801, 2093, 2156
BseMI	GCAATG	2 cut(s)	1861, 2117
BseNI	ACTGG	3 cut(s)	511, 2378, 2486
BseRI	GAGGAG	3 cut(s)	428, 1433, 1577
BseXI	GCAGC	7 cut(s)	545, 1320, 1408, 1411, 2471, 2581, 2609
BseYI	CCCAGC	1 cut(s)	2719
Bsh1236I	CGCG	7 cut(s)	16, 26, 1232, 1234, 1416, 1592, 2795
BshFI	GGCC	5 cut(s)	445, 1217, 1279, 1734, 2060
BshNI	GGYRCC	3 cut(s)	50, 1121, 1241
BshVI	ATCGAT	2 cut(s)	930, 2667
BsiHKAI	GWGCWC	3 cut(s)	1425, 1761, 2645
BsiHKCI	CYCGRG	1 cut(s)	1380
BsiSI	CCGG	6 cut(s)	256, 442, 472, 519, 1170, 1239
BslFI	GGGAC	2 cut(s)	1715, 1826
BslI	CCNNNNNNNGG	8 cut(s)	229, 230, 458, 525, 839, 1801, 2093, 2156
BsmAI	GTCTC	8 cut(s)	233, 489, 1395, 1488, 1529, 2020, 2156, 2748
BsmBI	CGTCTC	1 cut(s)	1395
BsmFI	GGGAC	2 cut(s)	1715, 1826
BsnI	GGCC	5 cut(s)	445, 1217, 1279, 1734, 2060
Bso31I	GGTCTC	1 cut(s)	489
BsoBI	CYCGRG	1 cut(s)	1380
Bsp119I	TTCGAA	1 cut(s)	302
Bsp1286I	GDGCHC	4 cut(s)	980, 1425, 1761, 2645
Bsp1407I	TGTACA	2 cut(s)	215, 1266
Bsp143I	GATC	4 cut(s)	1357, 2340, 2664, 2668
Bsp1720I	GCTNAGC	1 cut(s)	1925
BspANI	GGCC	5 cut(s)	445, 1217, 1279, 1734, 2060
BspDI	ATCGAT	2 cut(s)	930, 2667
BspFNI	CGCG	7 cut(s)	16, 26, 1232, 1234, 1416, 1592, 2795
BspMAI	CTGCAG	2 cut(s)	2461, 2599
BspOI	GCTAGC	2 cut(s)	533, 1983
BspPI	GGATC	1 cut(s)	2335
BspT104I	TTCGAA	1 cut(s)	302
BspT107I	GGYRCC	3 cut(s)	50, 1121, 1241
BspTNI	GGTCTC	1 cut(s)	489
BsrDI	GCAATG	2 cut(s)	1861, 2117
BsrFI	RCCGGY	2 cut(s)	471, 1238
BsrGI	TGTACA	2 cut(s)	215, 1266
BsrI	ACTGG	3 cut(s)	511, 2378, 2486
BssAI	RCCGGY	2 cut(s)	471, 1238
BssECI	CCNNGG	9 cut(s)	24, 519, 643, 1212, 1326, 2155, 2156, 2218, 2784
BssMI	GATC	4 cut(s)	1357, 2340, 2664, 2668
BssNI	GRCGYC	1 cut(s)	1242
BssT1I	CCWWGG	2 cut(s)	1212, 1326
Bst2UI	CCWGG	5 cut(s)	645, 1276, 1796, 2157, 2220
Bst6I	CTCTTC	5 cut(s)	155, 1055, 1783, 2016, 2679
BstACI	GRCGYC	1 cut(s)	1242
BstAPI	GCANNNNNTGC	1 cut(s)	1976
BstAUI	TGTACA	2 cut(s)	215, 1266
BstBAI	YACGTR	1 cut(s)	2279
BstBI	TTCGAA	1 cut(s)	302
BstC8I	GCNNGC	9 cut(s)	129, 527, 531, 825, 1175, 1656, 1868, 1981, 2058
BstDSI	CCRYGG	1 cut(s)	24
BstENI	CCTNNNNNAGG	2 cut(s)	837, 2154
BstFNI	CGCG	7 cut(s)	16, 26, 1232, 1234, 1416, 1592, 2795
BstH2I	RGCGCY	1 cut(s)	1245
BstHHI	GCGC	3 cut(s)	1085, 1234, 1244
BstKTI	GATC	4 cut(s)	1360, 2343, 2667, 2671
BstMAI	GTCTC	8 cut(s)	233, 489, 1395, 1488, 1529, 2020, 2156, 2748
BstMBI	GATC	4 cut(s)	1357, 2340, 2664, 2668
BstMWI	GCNNNNNNNGC	5 cut(s)	539, 1619, 1867, 1976, 2606
BstNI	CCWGG	5 cut(s)	645, 1276, 1796, 2157, 2220
BstNSI	RCATGY	2 cut(s)	131, 1658
BstSCI	CCNGG	6 cut(s)	518, 643, 1274, 1794, 2155, 2218
BstSFI	CTRYAG	5 cut(s)	57, 837, 2301, 2457, 2595
BstUI	CGCG	7 cut(s)	16, 26, 1232, 1234, 1416, 1592, 2795
BstV1I	GCAGC	7 cut(s)	545, 1320, 1408, 1411, 2471, 2581, 2609
BstV2I	GAAGAC	3 cut(s)	1028, 1151, 2574
BstX2I	RGATCY	1 cut(s)	2340
BstXI	CCANNNNNNTGG	1 cut(s)	2068
BstYI	RGATCY	1 cut(s)	2340
Bsu15I	ATCGAT	2 cut(s)	930, 2667
Bsu36I	CCTNAGG	1 cut(s)	1307
BsuI	GTATCC	2 cut(s)	1358, 2094
BsuRI	GGCC	5 cut(s)	445, 1217, 1279, 1734, 2060
BsuTUI	ATCGAT	2 cut(s)	930, 2667
BtgI	CCRYGG	1 cut(s)	24
BtgZI	GCGATG	1 cut(s)	2712
BtsIMutI	CAGTG	4 cut(s)	1245, 2571, 2683, 2782
Cac8I	GCNNGC	9 cut(s)	129, 527, 531, 825, 1175, 1656, 1868, 1981, 2058
CaiI	CAGNNNCTG	1 cut(s)	2726
CfoI	GCGC	3 cut(s)	1085, 1234, 1244
Cfr10I	RCCGGY	2 cut(s)	471, 1238
Cfr42I	CCGCGG	1 cut(s)	27
ClaI	ATCGAT	2 cut(s)	930, 2667
CseI	GACGC	4 cut(s)	1238, 1377, 1972, 2801
Csp6I	GTAC	9 cut(s)	80, 186, 216, 504, 1236, 1267, 1824, 2261, 2276
CviAII	CATG	6 cut(s)	121, 128, 229, 1655, 1917, 1976
CviQI	GTAC	9 cut(s)	80, 186, 216, 504, 1236, 1267, 1824, 2261, 2276
DinI	GGCGCC	1 cut(s)	1243
DpnI	GATC	4 cut(s)	1359, 2342, 2666, 2670
DpnII	GATC	4 cut(s)	1357, 2340, 2664, 2668
DraI	TTTAAA	3 cut(s)	895, 916, 957
Eam1104I	CTCTTC	5 cut(s)	155, 1055, 1783, 2016, 2679
EarI	CTCTTC	5 cut(s)	155, 1055, 1783, 2016, 2679
EciI	GGCGGA	1 cut(s)	1241
Ecl136II	GAGCTC	1 cut(s)	1759
Eco130I	CCWWGG	2 cut(s)	1212, 1326
Eco24I	GRGCYC	2 cut(s)	980, 1761
Eco31I	GGTCTC	1 cut(s)	489
Eco32I	GATATC	1 cut(s)	928
Eco47I	GGWCC	7 cut(s)	991, 1303, 1556, 1702, 1813, 2470, 2705
Eco53kI	GAGCTC	1 cut(s)	1759
Eco57I	CTGAAG	4 cut(s)	327, 522, 2285, 2748
Eco81I	CCTNAGG	1 cut(s)	1307
Eco88I	CYCGRG	1 cut(s)	1380
EcoICRI	GAGCTC	1 cut(s)	1759
EcoNI	CCTNNNNNAGG	2 cut(s)	837, 2154
EcoO109I	RGGNCCY	3 cut(s)	1702, 1813, 2705
EcoRII	CCWGG	5 cut(s)	643, 1274, 1794, 2155, 2218
EcoRV	GATATC	1 cut(s)	928
EcoT14I	CCWWGG	2 cut(s)	1212, 1326
EcoT22I	ATGCAT	2 cut(s)	129, 133
EcoT38I	GRGCYC	2 cut(s)	980, 1761
EgeI	GGCGCC	1 cut(s)	1243
EheI	GGCGCC	1 cut(s)	1243
ErhI	CCWWGG	2 cut(s)	1212, 1326
Esp3I	CGTCTC	1 cut(s)	1395
FaeI	CATG	6 cut(s)	124, 131, 232, 1658, 1920, 1979
FalI	AAGNNNNNCTT	2 cut(s)	325, 357
FaqI	GGGAC	2 cut(s)	1715, 1826
FatI	CATG	6 cut(s)	120, 127, 228, 1654, 1916, 1975
FauI	CCCGC	1 cut(s)	19
FriOI	GRGCYC	2 cut(s)	980, 1761
FspBI	CTAG	8 cut(s)	45, 83, 189, 530, 1067, 1526, 1706, 1980
FspI	TGCGCA	1 cut(s)	1084
GlaI	GCGC	3 cut(s)	1084, 1233, 1243
GsaI	CCCAGC	1 cut(s)	2723
GsuI	CTGGAG	3 cut(s)	286, 2241, 2730
HaeII	RGCGCY	1 cut(s)	1245
HaeIII	GGCC	5 cut(s)	445, 1217, 1279, 1734, 2060
HapII	CCGG	6 cut(s)	256, 442, 472, 519, 1170, 1239
HgaI	GACGC	4 cut(s)	1238, 1377, 1972, 2801
HhaI	GCGC	3 cut(s)	1085, 1234, 1244
Hin1I	GRCGYC	1 cut(s)	1242
Hin1II	CATG	6 cut(s)	124, 131, 232, 1658, 1920, 1979
Hin6I	GCGC	3 cut(s)	1083, 1232, 1242
HinP1I	GCGC	3 cut(s)	1083, 1232, 1242
HincII	GTYRAC	2 cut(s)	21, 1162
HindII	GTYRAC	2 cut(s)	21, 1162
HinfI	GANTC	9 cut(s)	357, 435, 1604, 1775, 2243, 2528, 2750, 2780, 2813
HpaI	GTTAAC	1 cut(s)	21
HpaII	CCGG	6 cut(s)	256, 442, 472, 519, 1170, 1239
HphI	GGTGA	8 cut(s)	578, 822, 829, 1150, 1766, 2252, 2450, 2650
Hpy166II	GTNNAC	6 cut(s)	21, 173, 218, 1162, 1742, 2441
Hpy8I	GTNNAC	6 cut(s)	21, 173, 218, 1162, 1742, 2441
HpyCH4IV	ACGT	5 cut(s)	363, 1576, 1744, 1941, 2278
HpyF10VI	GCNNNNNNNGC	5 cut(s)	539, 1619, 1867, 1976, 2606
HpySE526I	ACGT	5 cut(s)	363, 1576, 1744, 1941, 2278
Hsp92I	GRCGYC	1 cut(s)	1242
Hsp92II	CATG	6 cut(s)	124, 131, 232, 1658, 1920, 1979
HspAI	GCGC	3 cut(s)	1083, 1232, 1242
KasI	GGCGCC	1 cut(s)	1241
KflI	GGGWCCC	1 cut(s)	1813
KspAI	GTTAAC	1 cut(s)	21
KspI	CCGCGG	1 cut(s)	27
Kzo9I	GATC	4 cut(s)	1357, 2340, 2664, 2668
LmnI	GCTCC	6 cut(s)	1330, 1420, 1590, 2152, 2542, 2721
Lsp1109I	GCAGC	7 cut(s)	545, 1320, 1408, 1411, 2471, 2581, 2609
LweI	GCATC	8 cut(s)	114, 836, 1183, 1198, 1795, 1820, 2287, 2636
MaeI	CTAG	8 cut(s)	45, 83, 189, 530, 1067, 1526, 1706, 1980
MaeII	ACGT	5 cut(s)	363, 1576, 1744, 1941, 2278
MaeIII	GTNAC	9 cut(s)	467, 688, 698, 1008, 1016, 1286, 2048, 2281, 2777
MalI	GATC	4 cut(s)	1359, 2342, 2666, 2670
MboI	GATC	4 cut(s)	1357, 2340, 2664, 2668
MfeI	CAATTG	1 cut(s)	1472
MflI	RGATCY	1 cut(s)	2340
MhlI	GDGCHC	4 cut(s)	980, 1425, 1761, 2645
Mly113I	GGCGCC	1 cut(s)	1242
MlyI	GAGTC	5 cut(s)	429, 1613, 1769, 2759, 2774
MmeI	TCCRAC	4 cut(s)	457, 1985, 2074, 2733
Mph1103I	ATGCAT	2 cut(s)	129, 133
MroXI	GAANNNNTTC	1 cut(s)	667
MslI	CAYNNNNRTG	2 cut(s)	1659, 2066
MspA1I	CMGCKG	3 cut(s)	26, 1365, 2726
MspI	CCGG	6 cut(s)	256, 442, 472, 519, 1170, 1239
MspR9I	CCNGG	6 cut(s)	520, 645, 1276, 1796, 2157, 2220
MunI	CAATTG	1 cut(s)	1472
MvaI	CCWGG	5 cut(s)	645, 1276, 1796, 2157, 2220
MvnI	CGCG	7 cut(s)	16, 26, 1232, 1234, 1416, 1592, 2795
MwoI	GCNNNNNNNGC	5 cut(s)	539, 1619, 1867, 1976, 2606
NarI	GGCGCC	1 cut(s)	1242
NciI	CCSGG	1 cut(s)	520
NdeII	GATC	4 cut(s)	1357, 2340, 2664, 2668
NheI	GCTAGC	2 cut(s)	529, 1979
NlaIII	CATG	6 cut(s)	124, 131, 232, 1658, 1920, 1979
NmeAIII	GCCGAG	1 cut(s)	1098
NmuCI	GTSAC	6 cut(s)	688, 1008, 1016, 2048, 2281, 2777
NsbI	TGCGCA	1 cut(s)	1084
NsiI	ATGCAT	2 cut(s)	129, 133
NspI	RCATGY	2 cut(s)	131, 1658
NspV	TTCGAA	1 cut(s)	302
PaeI	GCATGC	2 cut(s)	131, 1658
PasI	CCCWGGG	1 cut(s)	2156
PdmI	GAANNNNTTC	1 cut(s)	667
PfeI	GAWTC	4 cut(s)	357, 2243, 2528, 2813
PflMI	CCANNNNNTGG	1 cut(s)	1801
PleI	GAGTC	5 cut(s)	429, 1612, 1769, 2758, 2774
PluTI	GGCGCC	1 cut(s)	1245
PpsI	GAGTC	5 cut(s)	429, 1612, 1769, 2758, 2774
Ppu21I	YACGTR	1 cut(s)	2279
PpuMI	RGGWCCY	3 cut(s)	1702, 1813, 2705
PsiI	TTATAA	2 cut(s)	147, 1025
Psp124BI	GAGCTC	1 cut(s)	1761
Psp5II	RGGWCCY	3 cut(s)	1702, 1813, 2705
Psp6I	CCWGG	5 cut(s)	643, 1274, 1794, 2155, 2218
PspFI	CCCAGC	1 cut(s)	2719
PspGI	CCWGG	5 cut(s)	643, 1274, 1794, 2155, 2218
PspPPI	RGGWCCY	3 cut(s)	1702, 1813, 2705
PstI	CTGCAG	2 cut(s)	2461, 2599
PstNI	CAGNNNCTG	1 cut(s)	2726
PsuI	RGATCY	1 cut(s)	2340
RsaI	GTAC	9 cut(s)	81, 187, 217, 505, 1237, 1268, 1825, 2262, 2277
RsaNI	GTAC	9 cut(s)	80, 186, 216, 504, 1236, 1267, 1824, 2261, 2276
RseI	CAYNNNNRTG	2 cut(s)	1659, 2066
SacI	GAGCTC	1 cut(s)	1761
SacII	CCGCGG	1 cut(s)	27
Sau3AI	GATC	4 cut(s)	1357, 2340, 2664, 2668
ScaI	AGTACT	1 cut(s)	81
SchI	GAGTC	5 cut(s)	429, 1613, 1769, 2759, 2774
ScrFI	CCNGG	6 cut(s)	520, 645, 1276, 1796, 2157, 2220
SduI	GDGCHC	4 cut(s)	980, 1425, 1761, 2645
SfaNI	GCATC	8 cut(s)	114, 836, 1183, 1198, 1795, 1820, 2287, 2636
SfcI	CTRYAG	5 cut(s)	57, 837, 2301, 2457, 2595
SfoI	GGCGCC	1 cut(s)	1243
Sfr303I	CCGCGG	1 cut(s)	27
SfuI	TTCGAA	1 cut(s)	302
SgrBI	CCGCGG	1 cut(s)	27
SinI	GGWCC	7 cut(s)	991, 1303, 1556, 1702, 1813, 2470, 2705
SmiI	ATTTAAAT	1 cut(s)	957
SmiMI	CAYNNNNRTG	2 cut(s)	1659, 2066
SmlI	CTYRAG	1 cut(s)	1259
SmoI	CTYRAG	1 cut(s)	1259
SphI	GCATGC	2 cut(s)	131, 1658
SspDI	GGCGCC	1 cut(s)	1241
SspI	AATATT	1 cut(s)	105
SspMI	CTAG	8 cut(s)	45, 83, 189, 530, 1067, 1526, 1706, 1980
SstI	GAGCTC	1 cut(s)	1761
StyD4I	CCNGG	6 cut(s)	518, 643, 1274, 1794, 2155, 2218
StyI	CCWWGG	2 cut(s)	1212, 1326
SwaI	ATTTAAAT	1 cut(s)	957
TaiI	ACGT	5 cut(s)	366, 1579, 1747, 1944, 2281
TaqI	TCGA	9 cut(s)	158, 302, 493, 512, 866, 930, 1439, 2605, 2667
TatI	WGTACW	6 cut(s)	79, 185, 215, 503, 1266, 2260
TauI	GCSGC	6 cut(s)	1257, 1365, 1595, 2515, 2726, 2798
TfiI	GAWTC	4 cut(s)	357, 2243, 2528, 2813
TscAI	CASTG	4 cut(s)	1252, 2578, 2683, 2782
TseFI	GTSAC	6 cut(s)	688, 1008, 1016, 2048, 2281, 2777
TseI	GCWGC	7 cut(s)	533, 1333, 1396, 1399, 2459, 2594, 2597
Tsp45I	GTSAC	6 cut(s)	688, 1008, 1016, 2048, 2281, 2777
TspGWI	ACGGA	5 cut(s)	21, 391, 707, 996, 1163
TspRI	CASTG	4 cut(s)	1252, 2578, 2683, 2782
Van91I	CCANNNNNTGG	1 cut(s)	1801
VpaK11BI	GGWCC	7 cut(s)	991, 1303, 1556, 1702, 1813, 2470, 2705
XagI	CCTNNNNNAGG	2 cut(s)	837, 2154
XapI	RAATTY	5 cut(s)	149, 851, 897, 1955, 2287
XbaI	TCTAGA	1 cut(s)	1525
XceI	RCATGY	2 cut(s)	131, 1658
XcmI	CCANNNNNNNNNTGG	3 cut(s)	255, 459, 1132
XmnI	GAANNNNTTC	1 cut(s)	667
XspI	CTAG	8 cut(s)	45, 83, 189, 530, 1067, 1526, 1706, 1980
ZrmI	AGTACT	1 cut(s)	81
Zsp2I	ATGCAT	2 cut(s)	129, 133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.