MD01G1153600.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
26193698 .. 26196298
2601 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1153600.v1.1.491

Sequence Viewer

Length: 1086 bp
ATGAGTTGCCCACAGGATTGGCCAGAGCCAATAGTCCGAGTACAATCCTTATCCAACAGCCCCGTAGTCCCAGATCGATACATCAAACCCCCACCTGATAGACCCACCTATATCCCATCATCCGATATTTCTGATCATGCCAACATCCCAGTTATTGACTTACAAGGCTTATCCGGCGAAGACGATCGCCTGCGTGCCGCCACGCTTAGCCAAATCTCCGAGGCCTGCCGTGAGTGGGGATTCTTCCAAGTGGTGAACCACGGCGTTAGCCCGGGACTGATGGACAAAACCCAACAGGTTTGGCGGGAATTCTTCCACTTGCCGATGGAGTTGAAACAGGCGTATGCCAACTCACCAAAGACTTATGAAGGGTATGGGAGCAGGCTTGGAATTGAGAGAGGCGCCATTCTTGACTGGAGCGATTACTATTTCCTTCACTATCTTCCGTCGTGCTTAAAGGACTACAACAAGTGGCCTGCCCTCCCTGATTATGGAAGGGAAGTAATAGATGAGTATGGAAAGGAGGTAGTGAAGCTTGGTGGGAGGATATTGAAGGCTTTGTCACTAAACCTTGGATTAGGAGAAGACTTTCTTCAAAATGCATTTGGTGGCCAAGACATTGGGGCATGTCTAAGAACTAACTTCTATCCAAAGTGCCCCCAGCCTGACCTGACCCTTGGCCTGTCGTCGCACTCGGACCCCGGCGGAATGACCATTTTGCTCGCCGACCAACAAGTCCCAGGTCTACAAGTCCGGAAAGATGACGCTTGGATCACTGTGAAACCAGCTCCACACGCTTTTATTGTCAATATTGGGGATCAAATTCAGGTCTTAAGTAATGCAACGTACAAGAGTGTAGAGCACAGGGTCATCGTAAACCCAGCTAAAGAGAGACTCTCGTTGGCCTTCTTCTACAATCCGAAGAGCGACATACCCATTCAACCGGTGAAGGAGCTTGTAACGCCGGACAAGCCTGCACAATATTCTCCTATGACGTTCAATGAATACAGGCTTTACATAAGATTGAATGGCCCTCGAGGAAAATCTCAAGTCGAATCTTTAAAGTCTCCACGAAATACATTGTGA

Protein Analysis

362

Amino Acids

40.59

Weight (kDa)

6.19

Isoelectric Point (pI)

45.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 49 - 160 1.1e-32 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 209 - 307 2.5e-34 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010173)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 734
AbsI CCTCGAGG 1 cut(s) 1035
AccB1I GGYRCC 1 cut(s) 401
AccI GTMKAC 1 cut(s) 745
AccIII TCCGGA 1 cut(s) 753
AciI CCGC 3 cut(s) 198, 304, 705
AclWI GGATC 2 cut(s) 779, 825
AcoI YGGCCR 2 cut(s) 20, 610
AcsI RAATTY 2 cut(s) 308, 822
AcyI GRCGYC 1 cut(s) 402
AfaI GTAC 2 cut(s) 42, 848
AfiI CCNNNNNNNGG 2 cut(s) 235, 491
AflII CTTAAG 1 cut(s) 832
AgeI ACCGGT 1 cut(s) 943
AgsI TTSAA 6 cut(s) 334, 553, 596, 941, 1000, 1027
AjnI CCWGG 1 cut(s) 739
AluBI AGCT 4 cut(s) 535, 788, 884, 955
AluI AGCT 4 cut(s) 535, 788, 884, 955
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 2 cut(s) 886, 1071
AlwI GGATC 2 cut(s) 779, 825
Ama87I CYCGRG 2 cut(s) 271, 1035
Aor13HI TCCGGA 1 cut(s) 753
AoxI GGCC 7 cut(s) 20, 222, 473, 610, 679, 903, 1030
ApoI RAATTY 2 cut(s) 308, 822
AsiGI ACCGGT 1 cut(s) 943
Asp700I GAANNNNTTC 1 cut(s) 588
AspLEI GCGC 1 cut(s) 404
AspS9I GGNCC 2 cut(s) 697, 1031
AsuC2I CCSGG 3 cut(s) 272, 273, 702
AsuHPI GGTGA 3 cut(s) 265, 345, 958
AvaI CYCGRG 2 cut(s) 271, 1035
AvaII GGWCC 1 cut(s) 697
BaeGI GKGCMC 1 cut(s) 659
BalI TGGCCA 2 cut(s) 22, 612
BanI GGYRCC 1 cut(s) 401
BbsI GAAGAC 2 cut(s) 186, 591
Bbv12I GWGCWC 1 cut(s) 864
BccI CCATC 3 cut(s) 124, 274, 319
BceAI ACGGC 2 cut(s) 213, 277
BciT130I CCWGG 1 cut(s) 741
BclI TGATCA 1 cut(s) 133
BcnI CCSGG 3 cut(s) 272, 273, 702
BcoDI GTCTC 2 cut(s) 886, 1071
BfoI RGCGCY 1 cut(s) 405
BfrI CTTAAG 1 cut(s) 832
BisI GCNGC 1 cut(s) 198
BlpI GCTNAGC 1 cut(s) 206
BlsI GCNGC 1 cut(s) 199
Bme1390I CCNGG 4 cut(s) 272, 273, 702, 741
Bme18I GGWCC 1 cut(s) 697
BmeT110I CYCGRG 2 cut(s) 271, 1035
BmgT120I GGNCC 2 cut(s) 697, 1031
BmiI GGNNCC 2 cut(s) 403, 699
BmrFI CCNGG 4 cut(s) 272, 273, 702, 741
BmrI ACTGGG 1 cut(s) 143
BmuI ACTGGG 1 cut(s) 143
BpiI GAAGAC 2 cut(s) 186, 591
BplI GAGNNNNNCTC 2 cut(s) 881, 913
BpmI CTGGAG 1 cut(s) 436
Bpu1102I GCTNAGC 1 cut(s) 206
BpuEI CTTGAG 1 cut(s) 1032
BpuMI CCSGG 3 cut(s) 272, 273, 702
Bsa29I ATCGAT 1 cut(s) 76
BsaHI GRCGYC 1 cut(s) 402
BsaJI CCNNGG 7 cut(s) 219, 259, 271, 571, 676, 700, 739
BsaWI WCCGGW 2 cut(s) 753, 943
Bsc4I CCNNNNNNNGG 2 cut(s) 235, 491
Bse118I RCCGGY 1 cut(s) 943
Bse1I ACTGG 2 cut(s) 149, 419
BseAI TCCGGA 1 cut(s) 753
BseBI CCWGG 1 cut(s) 741
BseCI ATCGAT 1 cut(s) 76
BseDI CCNNGG 7 cut(s) 219, 259, 271, 571, 676, 700, 739
BseGI GGATG 2 cut(s) 119, 144
BseLI CCNNNNNNNGG 2 cut(s) 235, 491
BseNI ACTGG 2 cut(s) 149, 419
BseSI GKGCMC 1 cut(s) 659
BseYI CCCAGC 2 cut(s) 660, 880
BsgI GTGCAG 1 cut(s) 960
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 7 cut(s) 22, 224, 475, 612, 681, 905, 1032
BshNI GGYRCC 1 cut(s) 401
BshTI ACCGGT 1 cut(s) 943
BshVI ATCGAT 1 cut(s) 76
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 864
BsiHKCI CYCGRG 2 cut(s) 271, 1035
BsiSI CCGG 6 cut(s) 174, 272, 702, 754, 944, 965
BslFI GGGAC 3 cut(s) 53, 288, 722
BslI CCNNNNNNNGG 2 cut(s) 235, 491
BsmAI GTCTC 2 cut(s) 886, 1071
BsmFI GGGAC 3 cut(s) 53, 288, 722
BsnI GGCC 7 cut(s) 22, 224, 475, 612, 681, 905, 1032
BsoBI CYCGRG 2 cut(s) 271, 1035
Bsp1286I GDGCHC 2 cut(s) 659, 864
Bsp13I TCCGGA 1 cut(s) 753
Bsp143I GATC 5 cut(s) 73, 133, 184, 771, 817
Bsp1720I GCTNAGC 1 cut(s) 206
BspACI CCGC 3 cut(s) 198, 304, 705
BspANI GGCC 7 cut(s) 22, 224, 475, 612, 681, 905, 1032
BspDI ATCGAT 1 cut(s) 76
BspEI TCCGGA 1 cut(s) 753
BspLI GGNNCC 2 cut(s) 403, 699
BspPI GGATC 2 cut(s) 779, 825
BspQI GCTCTTC 1 cut(s) 917
BspT107I GGYRCC 1 cut(s) 401
BspTI CTTAAG 1 cut(s) 832
BsrFI RCCGGY 1 cut(s) 943
BsrI ACTGG 2 cut(s) 149, 419
BssAI RCCGGY 1 cut(s) 943
BssECI CCNNGG 7 cut(s) 219, 259, 271, 571, 676, 700, 739
BssMI GATC 5 cut(s) 73, 133, 184, 771, 817
BssNI GRCGYC 1 cut(s) 402
BssT1I CCWWGG 2 cut(s) 571, 676
Bst2UI CCWGG 1 cut(s) 741
Bst4CI ACNGT 1 cut(s) 778
Bst6I CTCTTC 1 cut(s) 917
BstACI GRCGYC 1 cut(s) 402
BstAFI CTTAAG 1 cut(s) 832
BstC8I GCNNGC 7 cut(s) 191, 195, 226, 383, 477, 723, 975
BstDEI CTNAG 2 cut(s) 206, 632
BstDSI CCRYGG 1 cut(s) 259
BstF5I GGATG 2 cut(s) 119, 144
BstH2I RGCGCY 1 cut(s) 405
BstHHI GCGC 1 cut(s) 404
BstKTI GATC 5 cut(s) 76, 136, 187, 774, 820
BstMAI GTCTC 2 cut(s) 886, 1071
BstMBI GATC 5 cut(s) 73, 133, 184, 771, 817
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 4 cut(s) 174, 794, 961, 970
BstNI CCWGG 1 cut(s) 741
BstNSI RCATGY 1 cut(s) 630
BstSCI CCNGG 4 cut(s) 270, 271, 700, 739
BstSLI GKGCMC 1 cut(s) 659
BstV2I GAAGAC 2 cut(s) 186, 591
BstXI CCANNNNNNTGG 2 cut(s) 18, 620
Bsu15I ATCGAT 1 cut(s) 76
BsuRI GGCC 7 cut(s) 22, 224, 475, 612, 681, 905, 1032
BsuTUI ATCGAT 1 cut(s) 76
BtgI CCRYGG 1 cut(s) 259
BtsCI GGATG 2 cut(s) 119, 144
BtsIMutI CAGTG 1 cut(s) 774
Cac8I GCNNGC 7 cut(s) 191, 195, 226, 383, 477, 723, 975
CfoI GCGC 1 cut(s) 404
Cfr10I RCCGGY 1 cut(s) 943
Cfr13I GGNCC 2 cut(s) 697, 1031
Cfr9I CCCGGG 1 cut(s) 271
ClaI ATCGAT 1 cut(s) 76
CseI GACGC 1 cut(s) 773
Csp6I GTAC 2 cut(s) 41, 847
CspAI ACCGGT 1 cut(s) 943
CviAII CATG 2 cut(s) 137, 627
CviQI GTAC 2 cut(s) 41, 847
DdeI CTNAG 2 cut(s) 206, 632
DinI GGCGCC 1 cut(s) 403
DpnI GATC 5 cut(s) 75, 135, 186, 773, 819
DpnII GATC 5 cut(s) 73, 133, 184, 771, 817
DraI TTTAAA 1 cut(s) 1062
DrdI GACNNNNNNGTC 1 cut(s) 734
DseDI GACNNNNNNGTC 1 cut(s) 734
EaeI YGGCCR 2 cut(s) 20, 610
Eam1104I CTCTTC 1 cut(s) 917
EarI CTCTTC 1 cut(s) 917
EciI GGCGGA 1 cut(s) 720
Eco130I CCWWGG 2 cut(s) 571, 676
Eco147I AGGCCT 1 cut(s) 224
Eco47I GGWCC 1 cut(s) 697
Eco88I CYCGRG 2 cut(s) 271, 1035
EcoRI GAATTC 1 cut(s) 308
EcoRII CCWGG 1 cut(s) 739
EcoT14I CCWWGG 2 cut(s) 571, 676
EcoT22I ATGCAT 1 cut(s) 604
EgeI GGCGCC 1 cut(s) 403
EheI GGCGCC 1 cut(s) 403
ErhI CCWWGG 2 cut(s) 571, 676
FaeI CATG 2 cut(s) 140, 630
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 3 cut(s) 53, 288, 722
FatI CATG 2 cut(s) 136, 626
FauI CCCGC 1 cut(s) 297
FbaI TGATCA 1 cut(s) 133
FblI GTMKAC 1 cut(s) 745
Fnu4HI GCNGC 1 cut(s) 198
FokI GGATG 2 cut(s) 106, 131
Fsp4HI GCNGC 1 cut(s) 198
GlaI GCGC 1 cut(s) 403
GluI GCNGC 1 cut(s) 198
GsaI CCCAGC 2 cut(s) 664, 884
GsuI CTGGAG 1 cut(s) 436
HaeII RGCGCY 1 cut(s) 405
HaeIII GGCC 7 cut(s) 22, 224, 475, 612, 681, 905, 1032
HapII CCGG 6 cut(s) 174, 272, 702, 754, 944, 965
HgaI GACGC 1 cut(s) 773
HhaI GCGC 1 cut(s) 404
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 2 cut(s) 140, 630
Hin6I GCGC 1 cut(s) 402
HinP1I GCGC 1 cut(s) 402
HindIII AAGCTT 1 cut(s) 533
HinfI GANTC 3 cut(s) 240, 894, 1055
HpaII CCGG 6 cut(s) 174, 272, 702, 754, 944, 965
HphI GGTGA 3 cut(s) 265, 345, 958
Hpy166II GTNNAC 3 cut(s) 256, 746, 877
Hpy188I TCNGA 6 cut(s) 38, 124, 133, 220, 697, 921
Hpy188III TCNNGA 2 cut(s) 410, 754
Hpy8I GTNNAC 3 cut(s) 256, 746, 877
Hpy99I CGWCG 2 cut(s) 451, 691
HpyAV CCTTC 6 cut(s) 362, 443, 489, 547, 916, 943
HpyCH4III ACNGT 1 cut(s) 778
HpyCH4IV ACGT 2 cut(s) 845, 995
HpyCH4V TGCA 3 cut(s) 602, 842, 977
HpyF10VI GCNNNNNNNGC 4 cut(s) 174, 794, 961, 970
HpyF3I CTNAG 2 cut(s) 206, 632
HpySE526I ACGT 2 cut(s) 845, 995
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 2 cut(s) 140, 630
HspAI GCGC 1 cut(s) 402
KasI GGCGCC 1 cut(s) 401
Kpn2I TCCGGA 1 cut(s) 753
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 5 cut(s) 73, 133, 184, 771, 817
LguI GCTCTTC 1 cut(s) 917
LmnI GCTCC 4 cut(s) 378, 417, 793, 952
MaeII ACGT 2 cut(s) 845, 995
MaeIII GTNAC 2 cut(s) 561, 958
MalI GATC 5 cut(s) 75, 135, 186, 773, 819
MboI GATC 5 cut(s) 73, 133, 184, 771, 817
MboII GAAGA 8 cut(s) 191, 235, 304, 434, 584, 596, 901, 934
MhlI GDGCHC 2 cut(s) 659, 864
MlsI TGGCCA 2 cut(s) 22, 612
MluCI AATT 3 cut(s) 308, 390, 822
MluNI TGGCCA 2 cut(s) 22, 612
Mly113I GGCGCC 1 cut(s) 402
MlyI GAGTC 1 cut(s) 888
MmeI TCCRAC 1 cut(s) 78
MnlI CCTC 7 cut(s) 214, 392, 491, 517, 537, 1031, 1044
Mox20I TGGCCA 2 cut(s) 22, 612
Mph1103I ATGCAT 1 cut(s) 604
MroI TCCGGA 1 cut(s) 753
MroXI GAANNNNTTC 1 cut(s) 588
MscI TGGCCA 2 cut(s) 22, 612
MseI TTAA 3 cut(s) 455, 833, 1061
Msp20I TGGCCA 2 cut(s) 22, 612
MspCI CTTAAG 1 cut(s) 832
MspI CCGG 6 cut(s) 174, 272, 702, 754, 944, 965
MspR9I CCNGG 4 cut(s) 272, 273, 702, 741
MvaI CCWGG 1 cut(s) 741
MwoI GCNNNNNNNGC 4 cut(s) 174, 794, 961, 970
NarI GGCGCC 1 cut(s) 402
NciI CCSGG 3 cut(s) 272, 273, 702
NdeII GATC 5 cut(s) 73, 133, 184, 771, 817
NlaIII CATG 2 cut(s) 140, 630
NlaIV GGNNCC 2 cut(s) 403, 699
NmuCI GTSAC 1 cut(s) 561
NsiI ATGCAT 1 cut(s) 604
NspI RCATGY 1 cut(s) 630
PaeR7I CTCGAG 1 cut(s) 1035
PceI AGGCCT 1 cut(s) 224
PciSI GCTCTTC 1 cut(s) 917
PdmI GAANNNNTTC 1 cut(s) 588
PfeI GAWTC 2 cut(s) 240, 1055
PinAI ACCGGT 1 cut(s) 943
PkrI GCNGC 1 cut(s) 199
Ple19I CGATCG 1 cut(s) 187
PleI GAGTC 1 cut(s) 888
PluTI GGCGCC 1 cut(s) 405
PpsI GAGTC 1 cut(s) 888
Psp6I CCWGG 1 cut(s) 739
PspFI CCCAGC 2 cut(s) 660, 880
PspGI CCWGG 1 cut(s) 739
PspN4I GGNNCC 2 cut(s) 403, 699
PspPI GGNCC 2 cut(s) 697, 1031
PspXI VCTCGAGB 1 cut(s) 1035
PvuI CGATCG 1 cut(s) 187
RsaI GTAC 2 cut(s) 42, 848
RsaNI GTAC 2 cut(s) 41, 847
SapI GCTCTTC 1 cut(s) 917
SaqAI TTAA 3 cut(s) 455, 833, 1061
SatI GCNGC 1 cut(s) 198
Sau3AI GATC 5 cut(s) 73, 133, 184, 771, 817
Sau96I GGNCC 2 cut(s) 697, 1031
SchI GAGTC 1 cut(s) 888
ScrFI CCNGG 4 cut(s) 272, 273, 702, 741
SduI GDGCHC 2 cut(s) 659, 864
SfoI GGCGCC 1 cut(s) 403
Sfr274I CTCGAG 1 cut(s) 1035
SinI GGWCC 1 cut(s) 697
SlaI CTCGAG 1 cut(s) 1035
SmaI CCCGGG 1 cut(s) 273
SmlI CTYRAG 3 cut(s) 832, 1035, 1047
SmoI CTYRAG 3 cut(s) 832, 1035, 1047
Sse9I AATT 3 cut(s) 308, 390, 822
SseBI AGGCCT 1 cut(s) 224
SsiI CCGC 3 cut(s) 198, 304, 705
SspDI GGCGCC 1 cut(s) 401
SspI AATATT 2 cut(s) 811, 983
StuI AGGCCT 1 cut(s) 224
StyD4I CCNGG 4 cut(s) 270, 271, 700, 739
StyI CCWWGG 2 cut(s) 571, 676
TaaI ACNGT 1 cut(s) 778
TaiI ACGT 2 cut(s) 848, 998
TaqI TCGA 3 cut(s) 76, 1036, 1053
TasI AATT 3 cut(s) 308, 390, 822
TatI WGTACW 1 cut(s) 40
TauI GCSGC 1 cut(s) 200
TfiI GAWTC 2 cut(s) 240, 1055
Tru1I TTAA 3 cut(s) 455, 833, 1061
Tru9I TTAA 3 cut(s) 455, 833, 1061
TscAI CASTG 1 cut(s) 781
TseFI GTSAC 1 cut(s) 561
Tsp45I GTSAC 1 cut(s) 561
TspDTI ATGAA 2 cut(s) 381, 1017
TspGWI ACGGA 1 cut(s) 435
TspMI CCCGGG 1 cut(s) 271
TspRI CASTG 1 cut(s) 781
Vha464I CTTAAG 1 cut(s) 832
VpaK11BI GGWCC 1 cut(s) 697
XapI RAATTY 2 cut(s) 308, 822
XceI RCATGY 1 cut(s) 630
XhoI CTCGAG 1 cut(s) 1035
XmaI CCCGGG 1 cut(s) 271
XmiI GTMKAC 1 cut(s) 745
XmnI GAANNNNTTC 1 cut(s) 588
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.