pycom01g17120

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
16511643 .. 16514307
2665 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g17120.2

Sequence Viewer

Length: 1185 bp
ATGATGTCATCCCGCTCTATATATACACAATTGTTGTCTATATATACATACAAACTACAAAGCATCGAAAACTTGAACTCCAAAGCTACTAAAAACACCATGAGTTGCCCACAGGATTGGCCAGAGCCAATAGTCCGAGTACAATCCTTATCCAACAGTCCCGTAGTCCCAGATCGATCCATGAAACCCCCACCTGATAGACCCACCTATATCTCATCATCCGATTTTTCTAATCATGCCAACATCCCAGTTATTGACTTACAAGGCTTATCCGGCGAAGACGATCGCCCGCGTGCCGCCACGCTTAGCCAAATCTCGGAGGCGTGCCGTGAGTGGGGATTCTTCCAAGTGGTGAACCACGGCGTTAGCCCGGGACTGATGGACAAAACCCAAGAGGTTTGGCGGGAATTCTTCCACTTGCCGATGGAGTTGAAGCAGGCGTATGCCAACTCACCAAAGACTTATGAAGGGTATGGGAGTAGGCTTGGAATTGAGAGAGGCGCCATTCTTGACTGGAGCGATTACTATTTCCTTCACTATCTTCCGTCGTGCTTAAAGGACTACAACAAGTGGCCTGCCCTCCCTGATTATGGAAGGGAAGTAATAGATGAGTATGGAAAGGAGGTAGTGAAGCTTGGTGGGAGGATATTGAAGGCTTTGTCACTAAACCTTGGATTAGGAGAAGACTTTCTCCAAAATGCATTTGGTGGCCAAGACATTGGGGCATGTCTAAGGACTAACTTTTATCCAAAGTGCCCCCAGCCTGACCTGACCCTTGGCCTGTCGTCGCACTCGGACCCCGGCGGAATGACCATTTTGCTCGCCGACCAACAAGTCCCAGGTCTACAAGTCCGGAAAGATGGGGCTTGGATCACTGTGAAACCATCTCCACACGCTTTTATTGTCAATATTGGGGATCAAATTCAGGTCTTAAGTAATGCAACGTACAAGAGTGTAGAGCACAGGGTCATCGTAAACCCAGCTAAAGAGAGACTCTCGTTGGCCTTCTTCTACAATCCGAAGAGCGACATACCCATTCAACCGGCGAAGGAGCTTGTAACGCCGGACAAGCCTGCACAATATTCTCCTATGACGTTCAATGAATACAGGCTTTACATAAGATTGAATGGCCCTCGAGGAAAATCTCAAGTCGAATCCTTAAAGTCTCCGCGAAATACATCGTGA

Protein Analysis

395

Amino Acids

44.25

Weight (kDa)

7.62

Isoelectric Point (pI)

49.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010173)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 833
AbsI CCTCGAGG 1 cut(s) 1134
AccB1I GGYRCC 1 cut(s) 500
AccBSI CCGCTC 1 cut(s) 15
AccI GTMKAC 1 cut(s) 844
AccII CGCG 2 cut(s) 292, 1171
AccIII TCCGGA 1 cut(s) 852
AciI CCGC 6 cut(s) 13, 290, 297, 403, 804, 1169
AclWI GGATC 3 cut(s) 171, 878, 924
AcoI YGGCCR 2 cut(s) 119, 709
AcsI RAATTY 2 cut(s) 407, 921
AcyI GRCGYC 1 cut(s) 501
AfaI GTAC 2 cut(s) 141, 947
AfiI CCNNNNNNNGG 3 cut(s) 316, 334, 590
AflII CTTAAG 1 cut(s) 931
AgsI TTSAA 6 cut(s) 76, 433, 652, 1040, 1099, 1126
AjnI CCWGG 1 cut(s) 838
AluBI AGCT 4 cut(s) 86, 634, 983, 1054
AluI AGCT 4 cut(s) 86, 634, 983, 1054
Alw21I GWGCWC 1 cut(s) 963
Alw26I GTCTC 2 cut(s) 985, 1170
AlwI GGATC 3 cut(s) 171, 878, 924
Ama87I CYCGRG 2 cut(s) 370, 1134
Aor13HI TCCGGA 1 cut(s) 852
AoxI GGCC 6 cut(s) 119, 572, 709, 778, 1002, 1129
ApoI RAATTY 2 cut(s) 407, 921
Asp700I GAANNNNTTC 1 cut(s) 687
AspLEI GCGC 1 cut(s) 503
AspS9I GGNCC 2 cut(s) 796, 1130
AsuC2I CCSGG 3 cut(s) 371, 372, 801
AsuHPI GGTGA 2 cut(s) 364, 444
AvaI CYCGRG 2 cut(s) 370, 1134
AvaII GGWCC 1 cut(s) 796
BaeGI GKGCMC 1 cut(s) 758
BalI TGGCCA 2 cut(s) 121, 711
BanI GGYRCC 1 cut(s) 500
BbsI GAAGAC 2 cut(s) 285, 690
Bbv12I GWGCWC 1 cut(s) 963
BccI CCATC 4 cut(s) 373, 418, 854, 892
BceAI ACGGC 2 cut(s) 312, 376
BciT130I CCWGG 1 cut(s) 840
BcnI CCSGG 3 cut(s) 371, 372, 801
BcoDI GTCTC 2 cut(s) 985, 1170
BfoI RGCGCY 1 cut(s) 504
BfrI CTTAAG 1 cut(s) 931
BisI GCNGC 1 cut(s) 297
BlpI GCTNAGC 1 cut(s) 305
BlsI GCNGC 1 cut(s) 298
Bme1390I CCNGG 4 cut(s) 371, 372, 801, 840
Bme18I GGWCC 1 cut(s) 796
BmeT110I CYCGRG 2 cut(s) 370, 1134
BmgT120I GGNCC 2 cut(s) 796, 1130
BmiI GGNNCC 2 cut(s) 502, 798
BmrFI CCNGG 4 cut(s) 371, 372, 801, 840
BmrI ACTGGG 1 cut(s) 242
BmsI GCATC 1 cut(s) 72
BmuI ACTGGG 1 cut(s) 242
BpiI GAAGAC 2 cut(s) 285, 690
BplI GAGNNNNNCTC 2 cut(s) 980, 1012
BpmI CTGGAG 1 cut(s) 535
Bpu1102I GCTNAGC 1 cut(s) 305
BpuEI CTTGAG 1 cut(s) 1131
BpuMI CCSGG 3 cut(s) 371, 372, 801
Bsa29I ATCGAT 1 cut(s) 175
BsaHI GRCGYC 1 cut(s) 501
BsaJI CCNNGG 6 cut(s) 358, 370, 670, 775, 799, 838
BsaWI WCCGGW 1 cut(s) 852
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 3 cut(s) 316, 334, 590
Bse118I RCCGGY 1 cut(s) 1042
Bse1I ACTGG 2 cut(s) 248, 518
BseAI TCCGGA 1 cut(s) 852
BseBI CCWGG 1 cut(s) 840
BseCI ATCGAT 1 cut(s) 175
BseDI CCNNGG 6 cut(s) 358, 370, 670, 775, 799, 838
BseGI GGATG 3 cut(s) 8, 218, 243
BseLI CCNNNNNNNGG 3 cut(s) 316, 334, 590
BseNI ACTGG 2 cut(s) 248, 518
BseSI GKGCMC 1 cut(s) 758
BseYI CCCAGC 2 cut(s) 759, 979
BsgI GTGCAG 1 cut(s) 1059
Bsh1236I CGCG 2 cut(s) 292, 1171
Bsh1285I CGRYCG 1 cut(s) 286
BshFI GGCC 6 cut(s) 121, 574, 711, 780, 1004, 1131
BshNI GGYRCC 1 cut(s) 500
BshVI ATCGAT 1 cut(s) 175
BsiEI CGRYCG 1 cut(s) 286
BsiHKAI GWGCWC 1 cut(s) 963
BsiHKCI CYCGRG 2 cut(s) 370, 1134
BsiSI CCGG 6 cut(s) 273, 371, 801, 853, 1043, 1064
BslFI GGGAC 4 cut(s) 144, 152, 387, 821
BslI CCNNNNNNNGG 3 cut(s) 316, 334, 590
BsmAI GTCTC 2 cut(s) 985, 1170
BsmFI GGGAC 4 cut(s) 144, 152, 387, 821
BsnI GGCC 6 cut(s) 121, 574, 711, 780, 1004, 1131
BsoBI CYCGRG 2 cut(s) 370, 1134
Bsp1286I GDGCHC 2 cut(s) 758, 963
Bsp13I TCCGGA 1 cut(s) 852
Bsp143I GATC 5 cut(s) 172, 176, 283, 870, 916
Bsp1720I GCTNAGC 1 cut(s) 305
BspACI CCGC 6 cut(s) 13, 290, 297, 403, 804, 1169
BspANI GGCC 6 cut(s) 121, 574, 711, 780, 1004, 1131
BspDI ATCGAT 1 cut(s) 175
BspEI TCCGGA 1 cut(s) 852
BspFNI CGCG 2 cut(s) 292, 1171
BspLI GGNNCC 2 cut(s) 502, 798
BspPI GGATC 3 cut(s) 171, 878, 924
BspQI GCTCTTC 1 cut(s) 1016
BspT107I GGYRCC 1 cut(s) 500
BspTI CTTAAG 1 cut(s) 931
BsrBI CCGCTC 1 cut(s) 15
BsrFI RCCGGY 1 cut(s) 1042
BsrI ACTGG 2 cut(s) 248, 518
BssAI RCCGGY 1 cut(s) 1042
BssECI CCNNGG 6 cut(s) 358, 370, 670, 775, 799, 838
BssMI GATC 5 cut(s) 172, 176, 283, 870, 916
BssNI GRCGYC 1 cut(s) 501
BssT1I CCWWGG 2 cut(s) 670, 775
Bst2UI CCWGG 1 cut(s) 840
Bst4CI ACNGT 2 cut(s) 158, 877
Bst6I CTCTTC 1 cut(s) 1016
BstACI GRCGYC 1 cut(s) 501
BstAFI CTTAAG 1 cut(s) 931
BstC8I GCNNGC 7 cut(s) 290, 294, 325, 438, 576, 822, 1074
BstDEI CTNAG 2 cut(s) 305, 731
BstDSI CCRYGG 1 cut(s) 358
BstF5I GGATG 3 cut(s) 8, 218, 243
BstFNI CGCG 2 cut(s) 292, 1171
BstH2I RGCGCY 1 cut(s) 504
BstHHI GCGC 1 cut(s) 503
BstKTI GATC 5 cut(s) 175, 179, 286, 873, 919
BstMAI GTCTC 2 cut(s) 985, 1170
BstMBI GATC 5 cut(s) 172, 176, 283, 870, 916
BstMCI CGRYCG 1 cut(s) 286
BstMWI GCNNNNNNNGC 3 cut(s) 273, 1060, 1069
BstNI CCWGG 1 cut(s) 840
BstNSI RCATGY 1 cut(s) 729
BstSCI CCNGG 4 cut(s) 369, 370, 799, 838
BstSLI GKGCMC 1 cut(s) 758
BstUI CGCG 2 cut(s) 292, 1171
BstV2I GAAGAC 2 cut(s) 285, 690
BstXI CCANNNNNNTGG 2 cut(s) 117, 719
Bsu15I ATCGAT 1 cut(s) 175
BsuRI GGCC 6 cut(s) 121, 574, 711, 780, 1004, 1131
BsuTUI ATCGAT 1 cut(s) 175
BtgI CCRYGG 1 cut(s) 358
BtsCI GGATG 3 cut(s) 8, 218, 243
BtsIMutI CAGTG 1 cut(s) 873
Cac8I GCNNGC 7 cut(s) 290, 294, 325, 438, 576, 822, 1074
CfoI GCGC 1 cut(s) 503
Cfr10I RCCGGY 1 cut(s) 1042
Cfr13I GGNCC 2 cut(s) 796, 1130
Cfr9I CCCGGG 1 cut(s) 370
ClaI ATCGAT 1 cut(s) 175
Csp6I GTAC 2 cut(s) 140, 946
CviAII CATG 4 cut(s) 100, 181, 236, 726
CviQI GTAC 2 cut(s) 140, 946
DdeI CTNAG 2 cut(s) 305, 731
DinI GGCGCC 1 cut(s) 502
DpnI GATC 5 cut(s) 174, 178, 285, 872, 918
DpnII GATC 5 cut(s) 172, 176, 283, 870, 916
DrdI GACNNNNNNGTC 1 cut(s) 833
DseDI GACNNNNNNGTC 1 cut(s) 833
EaeI YGGCCR 2 cut(s) 119, 709
Eam1104I CTCTTC 1 cut(s) 1016
EarI CTCTTC 1 cut(s) 1016
EciI GGCGGA 1 cut(s) 819
Eco130I CCWWGG 2 cut(s) 670, 775
Eco47I GGWCC 1 cut(s) 796
Eco88I CYCGRG 2 cut(s) 370, 1134
EcoRI GAATTC 1 cut(s) 407
EcoRII CCWGG 1 cut(s) 838
EcoT14I CCWWGG 2 cut(s) 670, 775
EcoT22I ATGCAT 1 cut(s) 703
EgeI GGCGCC 1 cut(s) 502
EheI GGCGCC 1 cut(s) 502
ErhI CCWWGG 2 cut(s) 670, 775
FaeI CATG 4 cut(s) 103, 184, 239, 729
FaqI GGGAC 4 cut(s) 144, 152, 387, 821
FatI CATG 4 cut(s) 99, 180, 235, 725
FauI CCCGC 3 cut(s) 20, 297, 396
FblI GTMKAC 1 cut(s) 844
Fnu4HI GCNGC 1 cut(s) 297
FokI GGATG 2 cut(s) 205, 230
Fsp4HI GCNGC 1 cut(s) 297
GlaI GCGC 1 cut(s) 502
GluI GCNGC 1 cut(s) 297
GsaI CCCAGC 2 cut(s) 763, 983
GsuI CTGGAG 1 cut(s) 535
HaeII RGCGCY 1 cut(s) 504
HaeIII GGCC 6 cut(s) 121, 574, 711, 780, 1004, 1131
HapII CCGG 6 cut(s) 273, 371, 801, 853, 1043, 1064
HhaI GCGC 1 cut(s) 503
Hin1I GRCGYC 1 cut(s) 501
Hin1II CATG 4 cut(s) 103, 184, 239, 729
Hin6I GCGC 1 cut(s) 501
HinP1I GCGC 1 cut(s) 501
HindIII AAGCTT 1 cut(s) 632
HinfI GANTC 3 cut(s) 339, 993, 1154
HpaII CCGG 6 cut(s) 273, 371, 801, 853, 1043, 1064
HphI GGTGA 2 cut(s) 364, 444
Hpy166II GTNNAC 3 cut(s) 355, 845, 976
Hpy188I TCNGA 5 cut(s) 137, 223, 319, 796, 1020
Hpy188III TCNNGA 3 cut(s) 509, 853, 1182
Hpy8I GTNNAC 3 cut(s) 355, 845, 976
Hpy99I CGWCG 2 cut(s) 550, 790
HpyAV CCTTC 6 cut(s) 461, 542, 588, 646, 1015, 1042
HpyCH4III ACNGT 2 cut(s) 158, 877
HpyCH4IV ACGT 2 cut(s) 944, 1094
HpyCH4V TGCA 3 cut(s) 701, 941, 1076
HpyF10VI GCNNNNNNNGC 3 cut(s) 273, 1060, 1069
HpyF3I CTNAG 2 cut(s) 305, 731
HpySE526I ACGT 2 cut(s) 944, 1094
Hsp92I GRCGYC 1 cut(s) 501
Hsp92II CATG 4 cut(s) 103, 184, 239, 729
HspAI GCGC 1 cut(s) 501
KasI GGCGCC 1 cut(s) 500
Kpn2I TCCGGA 1 cut(s) 852
Kzo9I GATC 5 cut(s) 172, 176, 283, 870, 916
LguI GCTCTTC 1 cut(s) 1016
LmnI GCTCC 2 cut(s) 516, 1051
LweI GCATC 1 cut(s) 72
MaeII ACGT 2 cut(s) 944, 1094
MaeIII GTNAC 2 cut(s) 660, 1057
MalI GATC 5 cut(s) 174, 178, 285, 872, 918
MbiI CCGCTC 1 cut(s) 15
MboI GATC 5 cut(s) 172, 176, 283, 870, 916
MboII GAAGA 7 cut(s) 290, 334, 403, 533, 695, 1000, 1033
MfeI CAATTG 1 cut(s) 29
MhlI GDGCHC 2 cut(s) 758, 963
MlsI TGGCCA 2 cut(s) 121, 711
MluCI AATT 4 cut(s) 29, 407, 489, 921
MluNI TGGCCA 2 cut(s) 121, 711
Mly113I GGCGCC 1 cut(s) 501
MlyI GAGTC 1 cut(s) 987
MmeI TCCRAC 1 cut(s) 177
MnlI CCTC 8 cut(s) 313, 388, 491, 590, 616, 636, 1130, 1143
Mox20I TGGCCA 2 cut(s) 121, 711
Mph1103I ATGCAT 1 cut(s) 703
MroI TCCGGA 1 cut(s) 852
MroXI GAANNNNTTC 1 cut(s) 687
MscI TGGCCA 2 cut(s) 121, 711
MseI TTAA 3 cut(s) 554, 932, 1160
Msp20I TGGCCA 2 cut(s) 121, 711
MspCI CTTAAG 1 cut(s) 931
MspI CCGG 6 cut(s) 273, 371, 801, 853, 1043, 1064
MspR9I CCNGG 4 cut(s) 371, 372, 801, 840
MunI CAATTG 1 cut(s) 29
MvaI CCWGG 1 cut(s) 840
MvnI CGCG 2 cut(s) 292, 1171
MwoI GCNNNNNNNGC 3 cut(s) 273, 1060, 1069
NarI GGCGCC 1 cut(s) 501
NciI CCSGG 3 cut(s) 371, 372, 801
NdeII GATC 5 cut(s) 172, 176, 283, 870, 916
NlaIII CATG 4 cut(s) 103, 184, 239, 729
NlaIV GGNNCC 2 cut(s) 502, 798
NmuCI GTSAC 1 cut(s) 660
NsiI ATGCAT 1 cut(s) 703
NspI RCATGY 1 cut(s) 729
PaeR7I CTCGAG 1 cut(s) 1134
PciSI GCTCTTC 1 cut(s) 1016
PdmI GAANNNNTTC 1 cut(s) 687
PfeI GAWTC 2 cut(s) 339, 1154
PkrI GCNGC 1 cut(s) 298
Ple19I CGATCG 1 cut(s) 286
PleI GAGTC 1 cut(s) 987
PluTI GGCGCC 1 cut(s) 504
PpsI GAGTC 1 cut(s) 987
Psp6I CCWGG 1 cut(s) 838
PspFI CCCAGC 2 cut(s) 759, 979
PspGI CCWGG 1 cut(s) 838
PspN4I GGNNCC 2 cut(s) 502, 798
PspPI GGNCC 2 cut(s) 796, 1130
PspXI VCTCGAGB 1 cut(s) 1134
PvuI CGATCG 1 cut(s) 286
RsaI GTAC 2 cut(s) 141, 947
RsaNI GTAC 2 cut(s) 140, 946
SapI GCTCTTC 1 cut(s) 1016
SaqAI TTAA 3 cut(s) 554, 932, 1160
SatI GCNGC 1 cut(s) 297
Sau3AI GATC 5 cut(s) 172, 176, 283, 870, 916
Sau96I GGNCC 2 cut(s) 796, 1130
SchI GAGTC 1 cut(s) 987
ScrFI CCNGG 4 cut(s) 371, 372, 801, 840
SduI GDGCHC 2 cut(s) 758, 963
SfaNI GCATC 1 cut(s) 72
SfoI GGCGCC 1 cut(s) 502
Sfr274I CTCGAG 1 cut(s) 1134
SinI GGWCC 1 cut(s) 796
SlaI CTCGAG 1 cut(s) 1134
SmaI CCCGGG 1 cut(s) 372
SmlI CTYRAG 3 cut(s) 931, 1134, 1146
SmoI CTYRAG 3 cut(s) 931, 1134, 1146
Sse9I AATT 4 cut(s) 29, 407, 489, 921
SsiI CCGC 6 cut(s) 13, 290, 297, 403, 804, 1169
SspDI GGCGCC 1 cut(s) 500
SspI AATATT 2 cut(s) 910, 1082
StyD4I CCNGG 4 cut(s) 369, 370, 799, 838
StyI CCWWGG 2 cut(s) 670, 775
TaaI ACNGT 2 cut(s) 158, 877
TaiI ACGT 2 cut(s) 947, 1097
TaqI TCGA 4 cut(s) 66, 175, 1135, 1152
TasI AATT 4 cut(s) 29, 407, 489, 921
TatI WGTACW 1 cut(s) 139
TauI GCSGC 1 cut(s) 299
TfiI GAWTC 2 cut(s) 339, 1154
Tru1I TTAA 3 cut(s) 554, 932, 1160
Tru9I TTAA 3 cut(s) 554, 932, 1160
TscAI CASTG 1 cut(s) 880
TseFI GTSAC 1 cut(s) 660
Tsp45I GTSAC 1 cut(s) 660
TspDTI ATGAA 3 cut(s) 197, 480, 1116
TspGWI ACGGA 1 cut(s) 534
TspMI CCCGGG 1 cut(s) 370
TspRI CASTG 1 cut(s) 880
Vha464I CTTAAG 1 cut(s) 931
VpaK11BI GGWCC 1 cut(s) 796
XapI RAATTY 2 cut(s) 407, 921
XceI RCATGY 1 cut(s) 729
XcmI CCANNNNNNNNNTGG 1 cut(s) 701
XhoI CTCGAG 1 cut(s) 1134
XmaI CCCGGG 1 cut(s) 370
XmiI GTMKAC 1 cut(s) 844
XmnI GAANNNNTTC 1 cut(s) 687
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.