MD01G1222600.v1.1

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
31478394 .. 31481636
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1222600.v1.1.491

Sequence Viewer

Length: 1212 bp
ATGCCGTTTTGCGAGGTTGCGTCGCCGCAGAATGCCGCCGCAGCGGACTCCAAGCTCAACGACGGAATCAAAATCTTCTACGAAACGTACGGCAGCGGACCGACCAAGGTCCTCCTCATCATAGGTTTGGCGGGGACTCACGACTCGTGGGGCCCACAGATTCAGGGACTGACGGTGTCCGTTGCACCCAATGACGACGAGAGGGTGGCAGCCGCCGCCTGCTGCGACAATGAGGCTGGTTTTAGCGGCGGTGACATCGAGGTGTGTGCCTTCGACAACAGAGGCATGGGTCGGAGCTCCATCCCCACGAAAAAATCCGAATATACAACAAGAACAATGGCAAAGGATGCAATTGCATTGATGGATCACTTGGGGTGGACAGAAGCCCATGTTTTCGGGCATTCGATGGGAGCTATGATAGCTTGCAAATTAGCAGCAATGGTGCCCGATAGAATTCTGTCGTTGGCTTTGCTTAATGTGACCGGGGGAGGTTTCGAATGTTTACCAAGGCTTGACCGACAAACACTATCCATTGCTGTCCGGTTTTTTAAGGCAAAGACTCCCGAGCAAAGGGCGGCTGTAGACTTGGACACGCACTACTCGAAGGGATATCTTGAAGAATATGTTGGATCCAACACGAGAAGGGCGATTTTATATCAAGAATATGTCAAAGGTATATCAGCAACCGGGATGCAGTCCAACCATGGTTTCGAGGGTCAAATCAATGCATGCTGGACGCATAAAATGACACGAAAGGAGATTGAATTGATCCGCTCAGCAGGATTTCTCGTTTCAGTCATTCATGGCAGGCATGACGTCATTGCTCAAATATATCATGCAAGGAGACTGGCAGAGAAGCTGCATCCTGTTGCTAGAATGGTAGATCTTCCTGGAGGGCATCTAGTGAGTCATGAAAGGACCGAGGAGGTAAACAAAGCTCTTATGGAGTTGATCAAGGCAACGGAAGCAAAGACCGAGCCACATGATTGGACAAATTTGCCTGAAACAAGTTCGGGGTGGATGGTTACAAGAATTTCCCGTATCAGAAAAAGCAGCGCAGAAGGGAGAAGTGTGTCATTCACGTCCAGCATATCTGAAAAGCTACATCTTTTCCTCTTATACCTCTTTGGCCTCTTTTCATTGGCATTGGAGAATGGAAGGAGAGCCCTCAGAACTATAAAACCAGCAAGAGTCGGACATGCCATCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

404

Amino Acids

44.24

Weight (kDa)

8.39

Isoelectric Point (pI)

42.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 37 - 306 2.2e-23 alpha/beta hydrolase fold
Hydrolase_4 PF12146 83 - 287 4.4e-10 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 83 - 312 3.1e-10 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 819
AccB1I GGYRCC 1 cut(s) 442
AccBSI CCGCTC 1 cut(s) 774
AccI GTMKAC 1 cut(s) 582
AclWI GGATC 4 cut(s) 372, 624, 637, 763
AcsI RAATTY 3 cut(s) 453, 994, 1032
AcyI GRCGYC 1 cut(s) 816
AfaI GTAC 1 cut(s) 89
AfiI CCNNNNNNNGG 1 cut(s) 570
AgsI TTSAA 2 cut(s) 617, 764
AjiI CACGTC 1 cut(s) 1083
AjnI CCWGG 1 cut(s) 889
AjuI GAANNNNNNNTTGG 4 cut(s) 609, 641, 692, 724
AluBI AGCT 7 cut(s) 55, 297, 413, 422, 859, 938, 1102
AluI AGCT 7 cut(s) 55, 297, 413, 422, 859, 938, 1102
Alw21I GWGCWC 1 cut(s) 299
Alw26I GTCTC 1 cut(s) 838
AlwI GGATC 4 cut(s) 372, 624, 637, 763
AlwNI CAGNNNCTG 1 cut(s) 169
Ama87I CYCGRG 1 cut(s) 563
AoxI GGCC 2 cut(s) 151, 1129
ApaI GGGCCC 1 cut(s) 155
ApeKI GCWGC 7 cut(s) 41, 93, 209, 222, 434, 859, 1053
ApoI RAATTY 3 cut(s) 453, 994, 1032
AspLEI GCGC 1 cut(s) 1058
AspS9I GGNCC 5 cut(s) 98, 109, 151, 152, 918
AsuC2I CCSGG 2 cut(s) 484, 688
AsuHPI GGTGA 1 cut(s) 263
AsuII TTCGAA 1 cut(s) 495
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 3 cut(s) 98, 109, 918
BaeGI GKGCMC 2 cut(s) 155, 447
BamHI GGATCC 1 cut(s) 629
BanI GGYRCC 1 cut(s) 442
BanII GRGCYC 3 cut(s) 155, 299, 1168
BauI CACGAG 2 cut(s) 145, 637
Bbv12I GWGCWC 1 cut(s) 299
BbvI GCAGC 7 cut(s) 53, 105, 209, 221, 446, 846, 1065
BccI CCATC 5 cut(s) 308, 355, 400, 1015, 1211
BceAI ACGGC 1 cut(s) 106
BcgI CGANNNNNNTGC 2 cut(s) 248, 282
BciT130I CCWGG 1 cut(s) 891
BclI TGATCA 1 cut(s) 951
BcnI CCSGG 2 cut(s) 484, 688
BcoDI GTCTC 1 cut(s) 838
BfaI CTAG 2 cut(s) 873, 902
BfmI CTRYAG 1 cut(s) 579
BglII AGATCT 1 cut(s) 883
BlpI GCTNAGC 1 cut(s) 775
Bme1390I CCNGG 3 cut(s) 484, 688, 891
Bme18I GGWCC 3 cut(s) 98, 109, 918
BmeT110I CYCGRG 1 cut(s) 563
BmgBI CACGTC 1 cut(s) 1083
BmgT120I GGNCC 5 cut(s) 98, 109, 151, 152, 918
BmiI GGNNCC 4 cut(s) 152, 153, 444, 631
BmrFI CCNGG 3 cut(s) 484, 688, 891
BmsI GCATC 4 cut(s) 337, 681, 871, 907
BoxI GACNNNNGTC 1 cut(s) 107
BpmI CTGGAG 1 cut(s) 912
Bpu1102I GCTNAGC 1 cut(s) 775
Bpu14I TTCGAA 1 cut(s) 495
BpuMI CCSGG 2 cut(s) 484, 688
BsaHI GRCGYC 1 cut(s) 816
BsaJI CCNNGG 5 cut(s) 105, 483, 506, 703, 921
BsaWI WCCGGW 1 cut(s) 540
Bsc4I CCNNNNNNNGG 1 cut(s) 570
Bse1I ACTGG 1 cut(s) 852
Bse3DI GCAATG 3 cut(s) 444, 531, 819
BseBI CCWGG 1 cut(s) 891
BseDI CCNNGG 5 cut(s) 105, 483, 506, 703, 921
BseGI GGATG 5 cut(s) 300, 352, 696, 862, 1026
BseLI CCNNNNNNNGG 1 cut(s) 570
BseMI GCAATG 3 cut(s) 444, 531, 819
BseMII CTCAG 2 cut(s) 789, 1183
BseNI ACTGG 1 cut(s) 852
BseRI GAGGAG 2 cut(s) 104, 938
BseSI GKGCMC 2 cut(s) 155, 447
BseXI GCAGC 7 cut(s) 53, 105, 209, 221, 446, 846, 1065
BshFI GGCC 2 cut(s) 153, 1131
BshNI GGYRCC 1 cut(s) 442
BsiHKAI GWGCWC 1 cut(s) 299
BsiHKCI CYCGRG 1 cut(s) 563
BsiSI CCGG 3 cut(s) 483, 541, 687
BsiWI CGTACG 1 cut(s) 87
BslFI GGGAC 2 cut(s) 148, 180
BslI CCNNNNNNNGG 1 cut(s) 570
BsmAI GTCTC 1 cut(s) 838
BsmFI GGGAC 2 cut(s) 148, 180
BsmI GAATGC 2 cut(s) 37, 400
BsnI GGCC 2 cut(s) 153, 1131
BsoBI CYCGRG 1 cut(s) 563
Bsp119I TTCGAA 1 cut(s) 495
Bsp120I GGGCCC 1 cut(s) 151
Bsp1286I GDGCHC 4 cut(s) 155, 299, 447, 1168
Bsp143I GATC 5 cut(s) 364, 629, 768, 883, 951
Bsp1720I GCTNAGC 1 cut(s) 775
Bsp19I CCATGG 1 cut(s) 703
BspANI GGCC 2 cut(s) 153, 1131
BspCNI CTCAG 2 cut(s) 788, 1182
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 4 cut(s) 152, 153, 444, 631
BspPI GGATC 4 cut(s) 372, 624, 637, 763
BspT104I TTCGAA 1 cut(s) 495
BspT107I GGYRCC 1 cut(s) 442
BsrBI CCGCTC 1 cut(s) 774
BsrDI GCAATG 3 cut(s) 444, 531, 819
BsrI ACTGG 1 cut(s) 852
BssECI CCNNGG 5 cut(s) 105, 483, 506, 703, 921
BssMI GATC 5 cut(s) 364, 629, 768, 883, 951
BssNI GRCGYC 1 cut(s) 816
BssSI CACGAG 2 cut(s) 145, 637
BssT1I CCWWGG 3 cut(s) 105, 506, 703
Bst2BI CACGAG 2 cut(s) 145, 637
Bst2UI CCWGG 1 cut(s) 891
Bst4CI ACNGT 1 cut(s) 175
BstACI GRCGYC 1 cut(s) 816
BstAPI GCANNNNNTGC 1 cut(s) 347
BstBI TTCGAA 1 cut(s) 495
BstC8I GCNNGC 4 cut(s) 220, 424, 730, 809
BstDEI CTNAG 2 cut(s) 775, 1169
BstDSI CCRYGG 1 cut(s) 703
BstF5I GGATG 5 cut(s) 300, 352, 696, 862, 1026
BstHHI GCGC 1 cut(s) 1058
BstKTI GATC 5 cut(s) 367, 632, 771, 886, 954
BstMAI GTCTC 1 cut(s) 838
BstMBI GATC 5 cut(s) 364, 629, 768, 883, 951
BstMWI GCNNNNNNNGC 5 cut(s) 41, 215, 347, 419, 965
BstNI CCWGG 1 cut(s) 891
BstNSI RCATGY 2 cut(s) 732, 1202
BstPAI GACNNNNGTC 1 cut(s) 107
BstSCI CCNGG 3 cut(s) 482, 686, 889
BstSFI CTRYAG 1 cut(s) 579
BstSLI GKGCMC 2 cut(s) 155, 447
BstV1I GCAGC 7 cut(s) 53, 105, 209, 221, 446, 846, 1065
BstX2I RGATCY 2 cut(s) 629, 883
BstXI CCANNNNNNTGG 1 cut(s) 987
BstYI RGATCY 2 cut(s) 629, 883
BsuRI GGCC 2 cut(s) 153, 1131
BtgI CCRYGG 1 cut(s) 703
BtrI CACGTC 1 cut(s) 1083
BtsCI GGATG 5 cut(s) 300, 352, 696, 862, 1026
Cac8I GCNNGC 4 cut(s) 220, 424, 730, 809
CaiI CAGNNNCTG 1 cut(s) 169
CciI TCATGA 1 cut(s) 910
CfoI GCGC 1 cut(s) 1058
Cfr13I GGNCC 5 cut(s) 98, 109, 151, 152, 918
CpoI CGGWCCG 1 cut(s) 98
CseI GACGC 2 cut(s) 9, 745
Csp6I GTAC 1 cut(s) 88
CspI CGGWCCG 1 cut(s) 98
CviQI GTAC 1 cut(s) 88
DdeI CTNAG 2 cut(s) 775, 1169
DpnI GATC 5 cut(s) 366, 631, 770, 885, 953
DpnII GATC 5 cut(s) 364, 629, 768, 883, 951
Ecl136II GAGCTC 1 cut(s) 297
Eco130I CCWWGG 3 cut(s) 105, 506, 703
Eco24I GRGCYC 3 cut(s) 155, 299, 1168
Eco32I GATATC 1 cut(s) 611
Eco47I GGWCC 3 cut(s) 98, 109, 918
Eco53kI GAGCTC 1 cut(s) 297
Eco88I CYCGRG 1 cut(s) 563
EcoICRI GAGCTC 1 cut(s) 297
EcoO109I RGGNCCY 2 cut(s) 109, 151
EcoRI GAATTC 1 cut(s) 453
EcoRII CCWGG 1 cut(s) 889
EcoRV GATATC 1 cut(s) 611
EcoT14I CCWWGG 3 cut(s) 105, 506, 703
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 3 cut(s) 155, 299, 1168
ErhI CCWWGG 3 cut(s) 105, 506, 703
FaqI GGGAC 2 cut(s) 148, 180
FauI CCCGC 1 cut(s) 124
FbaI TGATCA 1 cut(s) 951
FblI GTMKAC 1 cut(s) 582
FokI GGATG 5 cut(s) 287, 359, 703, 849, 1033
FriOI GRGCYC 3 cut(s) 155, 299, 1168
FspBI CTAG 2 cut(s) 873, 902
GlaI GCGC 1 cut(s) 1057
GsuI CTGGAG 1 cut(s) 912
HaeIII GGCC 2 cut(s) 153, 1131
HapII CCGG 3 cut(s) 483, 541, 687
HgaI GACGC 2 cut(s) 9, 745
HhaI GCGC 1 cut(s) 1058
Hin1I GRCGYC 1 cut(s) 816
Hin6I GCGC 1 cut(s) 1056
HinP1I GCGC 1 cut(s) 1056
HinfI GANTC 8 cut(s) 47, 66, 136, 143, 160, 559, 907, 1191
HpaII CCGG 3 cut(s) 483, 541, 687
HphI GGTGA 1 cut(s) 263
Hpy166II GTNNAC 4 cut(s) 378, 503, 583, 931
Hpy188I TCNGA 6 cut(s) 294, 319, 1046, 1096, 1172, 1196
Hpy188III TCNNGA 5 cut(s) 140, 563, 614, 659, 911
Hpy8I GTNNAC 4 cut(s) 378, 503, 583, 931
Hpy99I CGWCG 3 cut(s) 25, 65, 200
HpyAV CCTTC 5 cut(s) 280, 598, 636, 1055, 1152
HpyCH4III ACNGT 1 cut(s) 175
HpyCH4IV ACGT 3 cut(s) 86, 816, 1082
HpyCH4V TGCA 8 cut(s) 185, 350, 356, 426, 694, 728, 839, 862
HpyF10VI GCNNNNNNNGC 5 cut(s) 41, 215, 347, 419, 965
HpyF3I CTNAG 2 cut(s) 775, 1169
HpySE526I ACGT 3 cut(s) 86, 816, 1082
Hsp92I GRCGYC 1 cut(s) 816
HspAI GCGC 1 cut(s) 1056
Ksp22I TGATCA 1 cut(s) 951
Kzo9I GATC 5 cut(s) 364, 629, 768, 883, 951
LmnI GCTCC 3 cut(s) 294, 302, 410
Lsp1109I GCAGC 7 cut(s) 53, 105, 209, 221, 446, 846, 1065
LweI GCATC 4 cut(s) 337, 681, 871, 907
MaeI CTAG 2 cut(s) 873, 902
MaeII ACGT 3 cut(s) 86, 816, 1082
MaeIII GTNAC 3 cut(s) 251, 478, 1024
MalI GATC 5 cut(s) 366, 631, 770, 885, 953
MbiI CCGCTC 1 cut(s) 774
MboI GATC 5 cut(s) 364, 629, 768, 883, 951
MboII GAAGA 3 cut(s) 67, 629, 878
MfeI CAATTG 1 cut(s) 351
MflI RGATCY 2 cut(s) 629, 883
MhlI GDGCHC 4 cut(s) 155, 299, 447, 1168
MluCI AATT 6 cut(s) 351, 428, 453, 764, 994, 1032
MlyI GAGTC 6 cut(s) 41, 130, 137, 553, 916, 1200
MmeI TCCRAC 5 cut(s) 272, 607, 657, 723, 1174
Mph1103I ATGCAT 1 cut(s) 730
MseI TTAA 2 cut(s) 474, 549
MslI CAYNNNNRTG 1 cut(s) 260
MspA1I CMGCKG 2 cut(s) 44, 96
MspI CCGG 3 cut(s) 483, 541, 687
MspR9I CCNGG 3 cut(s) 484, 688, 891
MunI CAATTG 1 cut(s) 351
Mva1269I GAATGC 2 cut(s) 37, 400
MvaI CCWGG 1 cut(s) 891
MwoI GCNNNNNNNGC 5 cut(s) 41, 215, 347, 419, 965
NciI CCSGG 2 cut(s) 484, 688
NcoI CCATGG 1 cut(s) 703
NdeII GATC 5 cut(s) 364, 629, 768, 883, 951
NlaIV GGNNCC 4 cut(s) 152, 153, 444, 631
NmuCI GTSAC 2 cut(s) 251, 478
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 2 cut(s) 732, 1202
NspV TTCGAA 1 cut(s) 495
PaeI GCATGC 1 cut(s) 732
PagI TCATGA 1 cut(s) 910
PcsI WCGNNNNNNNCGW 2 cut(s) 599, 644
PctI GAATGC 2 cut(s) 37, 400
PfeI GAWTC 2 cut(s) 66, 160
Pfl23II CGTACG 1 cut(s) 87
PflFI GACNNNGTC 1 cut(s) 175
PfoI TCCNGGA 1 cut(s) 889
PleI GAGTC 6 cut(s) 41, 130, 137, 553, 915, 1199
PpsI GAGTC 6 cut(s) 41, 130, 137, 553, 915, 1199
PpuMI RGGWCCY 1 cut(s) 109
PshAI GACNNNNGTC 1 cut(s) 107
Psp124BI GAGCTC 1 cut(s) 299
Psp5II RGGWCCY 1 cut(s) 109
Psp6I CCWGG 1 cut(s) 889
PspGI CCWGG 1 cut(s) 889
PspLI CGTACG 1 cut(s) 87
PspN4I GGNNCC 4 cut(s) 152, 153, 444, 631
PspOMI GGGCCC 1 cut(s) 151
PspPI GGNCC 5 cut(s) 98, 109, 151, 152, 918
PspPPI RGGWCCY 1 cut(s) 109
PstNI CAGNNNCTG 1 cut(s) 169
PsuI RGATCY 2 cut(s) 629, 883
PsyI GACNNNGTC 1 cut(s) 175
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
RseI CAYNNNNRTG 1 cut(s) 260
Rsr2I CGGWCCG 1 cut(s) 98
RsrII CGGWCCG 1 cut(s) 98
SacI GAGCTC 1 cut(s) 299
SaqAI TTAA 2 cut(s) 474, 549
Sau3AI GATC 5 cut(s) 364, 629, 768, 883, 951
Sau96I GGNCC 5 cut(s) 98, 109, 151, 152, 918
SchI GAGTC 6 cut(s) 41, 130, 137, 553, 916, 1200
ScrFI CCNGG 3 cut(s) 484, 688, 891
SduI GDGCHC 4 cut(s) 155, 299, 447, 1168
SfaNI GCATC 4 cut(s) 337, 681, 871, 907
SfcI CTRYAG 1 cut(s) 579
SfuI TTCGAA 1 cut(s) 495
SinI GGWCC 3 cut(s) 98, 109, 918
SmiMI CAYNNNNRTG 1 cut(s) 260
SphI GCATGC 1 cut(s) 732
Sse9I AATT 6 cut(s) 351, 428, 453, 764, 994, 1032
SspMI CTAG 2 cut(s) 873, 902
SstI GAGCTC 1 cut(s) 299
StyD4I CCNGG 3 cut(s) 482, 686, 889
StyI CCWWGG 3 cut(s) 105, 506, 703
TaaI ACNGT 1 cut(s) 175
TaiI ACGT 3 cut(s) 89, 819, 1085
TaqI TCGA 6 cut(s) 258, 273, 404, 495, 602, 711
TaqII GACCGA 4 cut(s) 115, 531, 935, 989
TasI AATT 6 cut(s) 351, 428, 453, 764, 994, 1032
TauI GCSGC 7 cut(s) 28, 38, 41, 215, 218, 249, 578
TfiI GAWTC 2 cut(s) 66, 160
Tru1I TTAA 2 cut(s) 474, 549
Tru9I TTAA 2 cut(s) 474, 549
TseFI GTSAC 2 cut(s) 251, 478
TseI GCWGC 7 cut(s) 41, 93, 209, 222, 434, 859, 1053
Tsp45I GTSAC 2 cut(s) 251, 478
TspDTI ATGAA 3 cut(s) 791, 927, 1128
TspGWI ACGGA 3 cut(s) 78, 169, 977
Tth111I GACNNNGTC 1 cut(s) 175
VpaK11BI GGWCC 3 cut(s) 98, 109, 918
XapI RAATTY 3 cut(s) 453, 994, 1032
XceI RCATGY 2 cut(s) 732, 1202
XmiI GTMKAC 1 cut(s) 582
XspI CTAG 2 cut(s) 873, 902
ZraI GACGTC 1 cut(s) 817
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.