Prupe.2G313000_v2.0.a1

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
29517701 .. 29521539
3839 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G313000.1

Sequence Viewer

Length: 1398 bp
ATGGCAACAACCGCTCATTTTTTGCCACGTATTCCCGCCGACCTTCTAGACCATATTAGAGGATACGCCCAGACCCAAAGGATAGCCAAATTCTCATGTTCGTTTCCGGCATCTGAACAAAACGCAGAGTGCCTGACCTCCCAGCCTTTCTCTAAAACCTTTTTCACTTGTTCGTTCATCATCAAGACGATGCCGTATGGCGAGGTCGGGTCGCGGCAGAATGCCACTGGCCACGCCAACCTCAACAATGGAATCAAAATTTTCTATAGAACCTACGGTCAGGGACCGACCAAGGTCCTCCTCATCATAGGTTTGGCGGGGACTCACGATTCATGGGGCCCACAAATCCAGGGGCTGACAGGGTCCGTTACGCCCAATGATGATGATGAAAGGAGGGCCGCCGATGGCTGTGACAATGAGGCTGGTTTTAGTGGCGGTGGCATCGAGGTCTGTGCCTTCGATAACCGTGGTATGGGTCGGAGCTCCGTGCCCACCAAAAAATCCGAATATACAACAAAAACAATGGCAAAGGATGCAATTGCGTTGATGGATCATTTAGGCTGGAGAGAAGCCCATGTTTTCGGGCATTCCATGGGAGCTATGATAGCCTGCAAATTAGCAGCAATGGTGCCTGATAGAATTTTGTCATTGGCTTTGCTTAATGTGACTGGAGGAGGTTTTGAATGTTTACCAAGGCTTGACCGACACACATTATCAATTGCTGTCCGTTTCTTAAAGGCAAAGACTCCTGAGCAAAGGGCAGCTGTTGACTTGGACACCCACTACTCCAAGGGATATCTTGAGGAATATGTTGGATCCAACACGAGAAGGGCAATTTTATATCAAGAATATGTAAAAGGCATATCAGCAACTGGGATGCAGTCTAACCATGGTTTCGAGGGTCAAGTCAATGCATGCTGGACGCATAAGATGAAACAAATGGAAATAGAATTGATCCGCTCTGCAGGATTTCTTGTTTCAGTCATTCATGGAAGGCATGATGTCATTGCTCAAATATATTATGCAAGGCGACTGGCAGAGAAGCTGCACCCTGTTGCTAGAATGGTAGATCTTCCTGGAGGGCATCTAGTGAGTCATGAGAGGACGGAAGAGGTCAACAAAGCTCTTATTGAGTTGATCAAGGCATCAGAAGCAAAGACAGAGCCACATGATTGGACAAATTTGCCTGAAAAAAGTTTGGGGTGGATGGCTACAAGAATGTCACTAATCGGAAAAAGAACTGATGAAGGGAACTGTGTATCTTTCATGTGCAATATGTTCGAAAAGCTACATCTTTGCCTCTTATACCTCTTTGGCCTCTTTGCATTGGCATTTGAGAAGGCAAGGAGAACCTTCAGAAGTATAAAACCAGCTAGAATTGGACATTCCATCACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

466

Amino Acids

51.56

Weight (kDa)

8.85

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 628
AccBSI CCGCTC 2 cut(s) 14, 960
AccII CGCG 1 cut(s) 214
AciI CCGC 7 cut(s) 12, 36, 214, 317, 399, 435, 958
AclWI GGATC 4 cut(s) 558, 810, 823, 949
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 4 cut(s) 89, 258, 639, 1180
AcuI CTGAAG 1 cut(s) 1339
AfiI CCNNNNNNNGG 1 cut(s) 472
AgsI TTSAA 1 cut(s) 683
AjnI CCWGG 2 cut(s) 348, 1075
AluBI AGCT 7 cut(s) 483, 599, 764, 1045, 1124, 1288, 1373
AluI AGCT 7 cut(s) 483, 599, 764, 1045, 1124, 1288, 1373
Alw21I GWGCWC 1 cut(s) 485
AlwI GGATC 4 cut(s) 558, 810, 823, 949
AlwNI CAGNNNCTG 2 cut(s) 355, 872
AoxI GGCC 4 cut(s) 229, 337, 396, 1315
ApaI GGGCCC 1 cut(s) 341
ApeKI GCWGC 3 cut(s) 620, 761, 1045
ApoI RAATTY 4 cut(s) 89, 258, 639, 1180
AspS9I GGNCC 6 cut(s) 284, 295, 337, 338, 363, 396
AsuII TTCGAA 1 cut(s) 1281
AvaII GGWCC 3 cut(s) 284, 295, 363
BaeGI GKGCMC 2 cut(s) 341, 492
BalI TGGCCA 1 cut(s) 231
BamHI GGATCC 1 cut(s) 815
BanI GGYRCC 1 cut(s) 628
BanII GRGCYC 2 cut(s) 341, 485
BauI CACGAG 1 cut(s) 823
Bbv12I GWGCWC 1 cut(s) 485
BbvI GCAGC 3 cut(s) 632, 773, 1032
BccI CCATC 4 cut(s) 398, 541, 1201, 1397
BceAI ACGGC 1 cut(s) 178
BcgI CGANNNNNNTGC 4 cut(s) 434, 468, 1261, 1295
BciT130I CCWGG 2 cut(s) 350, 1077
BciVI GTATCC 1 cut(s) 56
BclI TGATCA 1 cut(s) 1137
BfaI CTAG 4 cut(s) 47, 1059, 1088, 1374
BfmI CTRYAG 2 cut(s) 265, 963
BfuI GTATCC 1 cut(s) 56
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 5 cut(s) 215, 399, 621, 762, 1046
BlsI GCNGC 5 cut(s) 216, 400, 622, 763, 1047
Bme1390I CCNGG 2 cut(s) 350, 1077
Bme18I GGWCC 3 cut(s) 284, 295, 363
BmgT120I GGNCC 6 cut(s) 284, 295, 337, 338, 363, 396
BmiI GGNNCC 6 cut(s) 285, 338, 339, 364, 630, 817
BmrFI CCNGG 2 cut(s) 350, 1077
BmrI ACTGGG 1 cut(s) 882
BmsI GCATC 7 cut(s) 119, 180, 450, 523, 867, 1093, 1154
BmuI ACTGGG 1 cut(s) 882
BoxI GACNNNNGTC 1 cut(s) 293
BpmI CTGGAG 3 cut(s) 583, 690, 1098
Bpu10I CCTNAGC 1 cut(s) 750
Bpu14I TTCGAA 1 cut(s) 1281
BpuEI CTTGAG 1 cut(s) 821
BsaAI YACGTR 1 cut(s) 29
BsaJI CCNNGG 7 cut(s) 291, 349, 466, 591, 692, 789, 889
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse1I ACTGG 4 cut(s) 232, 673, 877, 1038
Bse3DI GCAATG 2 cut(s) 630, 1005
BseBI CCWGG 2 cut(s) 350, 1077
BseDI CCNNGG 7 cut(s) 291, 349, 466, 591, 692, 789, 889
BseGI GGATG 3 cut(s) 538, 882, 1212
BseLI CCNNNNNNNGG 1 cut(s) 472
BseMI GCAATG 2 cut(s) 630, 1005
BseMII CTCAG 1 cut(s) 741
BseNI ACTGG 4 cut(s) 232, 673, 877, 1038
BseRI GAGGAG 2 cut(s) 290, 687
BseSI GKGCMC 2 cut(s) 341, 492
BseXI GCAGC 3 cut(s) 632, 773, 1032
BseYI CCCAGC 1 cut(s) 141
BsgI GTGCAG 1 cut(s) 1031
Bsh1236I CGCG 1 cut(s) 214
BshFI GGCC 4 cut(s) 231, 339, 398, 1317
BshNI GGYRCC 1 cut(s) 628
BsiHKAI GWGCWC 1 cut(s) 485
BsiSI CCGG 1 cut(s) 107
BslFI GGGAC 2 cut(s) 297, 334
BslI CCNNNNNNNGG 1 cut(s) 472
BsmFI GGGAC 2 cut(s) 297, 334
BsmI GAATGC 2 cut(s) 226, 586
BsnI GGCC 4 cut(s) 231, 339, 398, 1317
Bsp119I TTCGAA 1 cut(s) 1281
Bsp120I GGGCCC 1 cut(s) 337
Bsp1286I GDGCHC 3 cut(s) 341, 485, 492
Bsp143I GATC 5 cut(s) 550, 815, 954, 1069, 1137
Bsp19I CCATGG 2 cut(s) 591, 889
BspACI CCGC 7 cut(s) 12, 36, 214, 317, 399, 435, 958
BspANI GGCC 4 cut(s) 231, 339, 398, 1317
BspCNI CTCAG 1 cut(s) 742
BspFNI CGCG 1 cut(s) 214
BspHI TCATGA 1 cut(s) 1096
BspLI GGNNCC 6 cut(s) 285, 338, 339, 364, 630, 817
BspMAI CTGCAG 1 cut(s) 967
BspPI GGATC 4 cut(s) 558, 810, 823, 949
BspT104I TTCGAA 1 cut(s) 1281
BspT107I GGYRCC 1 cut(s) 628
BsrBI CCGCTC 2 cut(s) 14, 960
BsrDI GCAATG 2 cut(s) 630, 1005
BsrI ACTGG 4 cut(s) 232, 673, 877, 1038
BssECI CCNNGG 7 cut(s) 291, 349, 466, 591, 692, 789, 889
BssMI GATC 5 cut(s) 550, 815, 954, 1069, 1137
BssSI CACGAG 1 cut(s) 823
BssT1I CCWWGG 5 cut(s) 291, 591, 692, 789, 889
Bst2BI CACGAG 1 cut(s) 823
Bst2UI CCWGG 2 cut(s) 350, 1077
Bst4CI ACNGT 3 cut(s) 278, 467, 1256
Bst6I CTCTTC 1 cut(s) 1104
BstAPI GCANNNNNTGC 1 cut(s) 533
BstBAI YACGTR 1 cut(s) 29
BstBI TTCGAA 1 cut(s) 1281
BstC8I GCNNGC 2 cut(s) 610, 916
BstDEI CTNAG 1 cut(s) 750
BstDSI CCRYGG 3 cut(s) 466, 591, 889
BstF5I GGATG 3 cut(s) 538, 882, 1212
BstFNI CGCG 1 cut(s) 214
BstKTI GATC 5 cut(s) 553, 818, 957, 1072, 1140
BstMBI GATC 5 cut(s) 550, 815, 954, 1069, 1137
BstMWI GCNNNNNNNGC 4 cut(s) 11, 533, 605, 1151
BstNI CCWGG 2 cut(s) 350, 1077
BstNSI RCATGY 1 cut(s) 918
BstPAI GACNNNNGTC 1 cut(s) 293
BstSCI CCNGG 2 cut(s) 348, 1075
BstSFI CTRYAG 2 cut(s) 265, 963
BstSLI GKGCMC 2 cut(s) 341, 492
BstUI CGCG 1 cut(s) 214
BstV1I GCAGC 3 cut(s) 632, 773, 1032
BstX2I RGATCY 2 cut(s) 815, 1069
BstXI CCANNNNNNTGG 1 cut(s) 1173
BstYI RGATCY 2 cut(s) 815, 1069
BsuI GTATCC 1 cut(s) 56
BsuRI GGCC 4 cut(s) 231, 339, 398, 1317
BtgI CCRYGG 3 cut(s) 466, 591, 889
BtsCI GGATG 3 cut(s) 538, 882, 1212
BtsIMutI CAGTG 1 cut(s) 225
Cac8I GCNNGC 2 cut(s) 610, 916
CaiI CAGNNNCTG 2 cut(s) 355, 872
CciI TCATGA 1 cut(s) 1096
Cfr13I GGNCC 6 cut(s) 284, 295, 337, 338, 363, 396
CseI GACGC 1 cut(s) 931
DdeI CTNAG 1 cut(s) 750
DpnI GATC 5 cut(s) 552, 817, 956, 1071, 1139
DpnII GATC 5 cut(s) 550, 815, 954, 1069, 1137
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 1104
EarI CTCTTC 1 cut(s) 1104
Ecl136II GAGCTC 1 cut(s) 483
Eco130I CCWWGG 5 cut(s) 291, 591, 692, 789, 889
Eco24I GRGCYC 2 cut(s) 341, 485
Eco32I GATATC 1 cut(s) 797
Eco47I GGWCC 3 cut(s) 284, 295, 363
Eco53kI GAGCTC 1 cut(s) 483
Eco57I CTGAAG 1 cut(s) 1339
EcoICRI GAGCTC 1 cut(s) 483
EcoO109I RGGNCCY 2 cut(s) 295, 337
EcoRII CCWGG 2 cut(s) 348, 1075
EcoRV GATATC 1 cut(s) 797
EcoT14I CCWWGG 5 cut(s) 291, 591, 692, 789, 889
EcoT22I ATGCAT 1 cut(s) 916
EcoT38I GRGCYC 2 cut(s) 341, 485
ErhI CCWWGG 5 cut(s) 291, 591, 692, 789, 889
FaqI GGGAC 2 cut(s) 297, 334
FauI CCCGC 2 cut(s) 43, 310
FbaI TGATCA 1 cut(s) 1137
Fnu4HI GCNGC 5 cut(s) 215, 399, 621, 762, 1046
FokI GGATG 3 cut(s) 545, 889, 1219
FriOI GRGCYC 2 cut(s) 341, 485
Fsp4HI GCNGC 5 cut(s) 215, 399, 621, 762, 1046
FspBI CTAG 4 cut(s) 47, 1059, 1088, 1374
GluI GCNGC 5 cut(s) 215, 399, 621, 762, 1046
GsaI CCCAGC 1 cut(s) 145
GsuI CTGGAG 3 cut(s) 583, 690, 1098
HaeIII GGCC 4 cut(s) 231, 339, 398, 1317
HapII CCGG 1 cut(s) 107
HgaI GACGC 1 cut(s) 931
HincII GTYRAC 2 cut(s) 769, 1117
HindII GTYRAC 2 cut(s) 769, 1117
HinfI GANTC 5 cut(s) 252, 322, 329, 745, 1093
HpaII CCGG 1 cut(s) 107
Hpy166II GTNNAC 3 cut(s) 689, 769, 1117
Hpy188I TCNGA 6 cut(s) 115, 480, 505, 1150, 1232, 1358
Hpy188III TCNNGA 7 cut(s) 47, 184, 326, 749, 800, 845, 1097
Hpy8I GTNNAC 3 cut(s) 689, 769, 1117
HpyAV CCTTC 7 cut(s) 53, 466, 822, 987, 1241, 1333, 1363
HpyCH4III ACNGT 3 cut(s) 278, 467, 1256
HpyCH4IV ACGT 1 cut(s) 28
HpyCH4V TGCA 9 cut(s) 536, 612, 880, 914, 965, 1025, 1048, 1272, 1325
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 533, 605, 1151
HpyF3I CTNAG 1 cut(s) 750
HpySE526I ACGT 1 cut(s) 28
Ksp22I TGATCA 1 cut(s) 1137
Kzo9I GATC 5 cut(s) 550, 815, 954, 1069, 1137
LmnI GCTCC 3 cut(s) 480, 488, 596
Lsp1109I GCAGC 3 cut(s) 632, 773, 1032
LweI GCATC 7 cut(s) 119, 180, 450, 523, 867, 1093, 1154
MaeI CTAG 4 cut(s) 47, 1059, 1088, 1374
MaeII ACGT 1 cut(s) 28
MaeIII GTNAC 4 cut(s) 367, 410, 664, 1221
MalI GATC 5 cut(s) 552, 817, 956, 1071, 1139
MbiI CCGCTC 2 cut(s) 14, 960
MboI GATC 5 cut(s) 550, 815, 954, 1069, 1137
MboII GAAGA 2 cut(s) 1064, 1121
MfeI CAATTG 2 cut(s) 537, 717
MflI RGATCY 2 cut(s) 815, 1069
MhlI GDGCHC 3 cut(s) 341, 485, 492
MlsI TGGCCA 1 cut(s) 231
MluNI TGGCCA 1 cut(s) 231
MlyI GAGTC 3 cut(s) 316, 739, 1102
MmeI TCCRAC 3 cut(s) 458, 793, 843
Mox20I TGGCCA 1 cut(s) 231
Mph1103I ATGCAT 1 cut(s) 916
MscI TGGCCA 1 cut(s) 231
MseI TTAA 2 cut(s) 660, 734
Msp20I TGGCCA 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 764
MspI CCGG 1 cut(s) 107
MspR9I CCNGG 2 cut(s) 350, 1077
MunI CAATTG 2 cut(s) 537, 717
Mva1269I GAATGC 2 cut(s) 226, 586
MvaI CCWGG 2 cut(s) 350, 1077
MvnI CGCG 1 cut(s) 214
MwoI GCNNNNNNNGC 4 cut(s) 11, 533, 605, 1151
NcoI CCATGG 2 cut(s) 591, 889
NdeII GATC 5 cut(s) 550, 815, 954, 1069, 1137
NlaIV GGNNCC 6 cut(s) 285, 338, 339, 364, 630, 817
NmuCI GTSAC 3 cut(s) 410, 664, 1221
NsiI ATGCAT 1 cut(s) 916
NspI RCATGY 1 cut(s) 918
NspV TTCGAA 1 cut(s) 1281
PaeI GCATGC 1 cut(s) 918
PagI TCATGA 1 cut(s) 1096
PctI GAATGC 2 cut(s) 226, 586
PfeI GAWTC 2 cut(s) 252, 329
PflFI GACNNNGTC 1 cut(s) 361
PfoI TCCNGGA 1 cut(s) 1075
PkrI GCNGC 5 cut(s) 216, 400, 622, 763, 1047
PleI GAGTC 3 cut(s) 316, 739, 1101
PpsI GAGTC 3 cut(s) 316, 739, 1101
Ppu21I YACGTR 1 cut(s) 29
PpuMI RGGWCCY 1 cut(s) 295
PshAI GACNNNNGTC 1 cut(s) 293
Psp124BI GAGCTC 1 cut(s) 485
Psp5II RGGWCCY 1 cut(s) 295
Psp6I CCWGG 2 cut(s) 348, 1075
PspFI CCCAGC 1 cut(s) 141
PspGI CCWGG 2 cut(s) 348, 1075
PspN4I GGNNCC 6 cut(s) 285, 338, 339, 364, 630, 817
PspOMI GGGCCC 1 cut(s) 337
PspPI GGNCC 6 cut(s) 284, 295, 337, 338, 363, 396
PspPPI RGGWCCY 1 cut(s) 295
PstI CTGCAG 1 cut(s) 967
PstNI CAGNNNCTG 2 cut(s) 355, 872
PsuI RGATCY 2 cut(s) 815, 1069
PsyI GACNNNGTC 1 cut(s) 361
PvuII CAGCTG 1 cut(s) 764
SacI GAGCTC 1 cut(s) 485
SaqAI TTAA 2 cut(s) 660, 734
SatI GCNGC 5 cut(s) 215, 399, 621, 762, 1046
Sau3AI GATC 5 cut(s) 550, 815, 954, 1069, 1137
Sau96I GGNCC 6 cut(s) 284, 295, 337, 338, 363, 396
SchI GAGTC 3 cut(s) 316, 739, 1102
ScrFI CCNGG 2 cut(s) 350, 1077
SduI GDGCHC 3 cut(s) 341, 485, 492
SfaNI GCATC 7 cut(s) 119, 180, 450, 523, 867, 1093, 1154
SfcI CTRYAG 2 cut(s) 265, 963
SfuI TTCGAA 1 cut(s) 1281
SinI GGWCC 3 cut(s) 284, 295, 363
SmlI CTYRAG 1 cut(s) 800
SmoI CTYRAG 1 cut(s) 800
SphI GCATGC 1 cut(s) 918
SsiI CCGC 7 cut(s) 12, 36, 214, 317, 399, 435, 958
SspMI CTAG 4 cut(s) 47, 1059, 1088, 1374
SstI GAGCTC 1 cut(s) 485
StyD4I CCNGG 2 cut(s) 348, 1075
StyI CCWWGG 5 cut(s) 291, 591, 692, 789, 889
TaaI ACNGT 3 cut(s) 278, 467, 1256
TaiI ACGT 1 cut(s) 31
TaqI TCGA 4 cut(s) 444, 459, 897, 1281
TaqII GACCGA 2 cut(s) 301, 717
TauI GCSGC 2 cut(s) 217, 401
TfiI GAWTC 2 cut(s) 252, 329
Tru1I TTAA 2 cut(s) 660, 734
Tru9I TTAA 2 cut(s) 660, 734
TscAI CASTG 1 cut(s) 232
TseFI GTSAC 3 cut(s) 410, 664, 1221
TseI GCWGC 3 cut(s) 620, 761, 1045
Tsp45I GTSAC 3 cut(s) 410, 664, 1221
TspDTI ATGAA 7 cut(s) 166, 321, 402, 947, 977, 1255, 1260
TspGWI ACGGA 4 cut(s) 355, 475, 716, 1121
TspRI CASTG 1 cut(s) 232
Tth111I GACNNNGTC 1 cut(s) 361
VpaK11BI GGWCC 3 cut(s) 284, 295, 363
XapI RAATTY 4 cut(s) 89, 258, 639, 1180
XbaI TCTAGA 1 cut(s) 46
XceI RCATGY 1 cut(s) 918
XspI CTAG 4 cut(s) 47, 1059, 1088, 1374
Zsp2I ATGCAT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.