MD07G1293200.v1.1

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
35473179 .. 35476628
3450 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1293200.v1.1.491

Sequence Viewer

Length: 1209 bp
ATGCCGTTTTGCGAGGTCGCGTCGCCGCAGAATGCCGCGGCGGACGCCAAGCTCAACGCCGGAATCAAAATCTTCTACCGAACGTACGGCCGCGGACCTACCAAGGTCCTCCTCATCATAGGATTGGCGGGGACGCACGACTCGTGGGGTCCACAGATACAGGGCCTGACGGGGACCGTTATCCCCAATGATGACCAGAGGGCGGCAGCCGCCGATTGCTCCGACAATGAGGCTGGTTTTAGCGGCGTTGGCATCGAGGTGTGCGCCTTCGATAACCGGGGCATGGGTCGGAGCTCCATCCCCACCAAAAAATCAGAATATACAACAAGAACAATGGCAAAGGATGCAATTGCATTGATGGATCACTTGGGCTGGAGAGAATCCCATGTCTTCGGGCATTCTATGGGAGCTATGATAGCTTGCAAATTAGCAGCAATGGTGCCCAGTAGAATTCTGTCGTTGGCTTTGCTTAATGTGACCGGAGGAGGTTTCGAATGTTTACCAAGGCTTGACCGGCAAACAATATCCATTGCTGTCCGTTTTTTAAGGGCAAAGACTCCTGAGCAAAGGGCGGCTGTAGACTTGGACACTCACTACTCGAAGGGATATCTTGAGGAATATGTCGGATCCAAAACGAGAAGGGAAATTTTGTATCAAGAATATGTAAAAGGTATATCAGCAACCGGGATGCAGTCTAACCATGGTTTTGAGGGCCAAGTAAATGCATGCTGGACGCATAAAATGATGCGAATGGAGATTGAATTGATCCGCTCAGCAGGATTTCTCGTTTCAGTCATCCATGGCAGGCATGATGTCATTGCTCAAATATATTACGCAAGGAGACTGGCAGAGAAGCTGCATCCTGTTGCGAAAATGGTAGATCTTCCCGGAGGGCATCTAGTGAGTCACGAGAGGACTGAAGAGGTAAACAAAGCTCTTATGGAGCTGATCAAGGCAACGGAAGCAAAGACTGAGCCACACGATTGGACAAATTTGCCTGAAAAAAGTTCGGCGTGGATAGTTACAAGAATTTCGCTTATCAGAACTAGTACCGGAGAAGGGAGAATTGTATCGTTCATGTGCAGTGTATTCGAAAAGCTACATCTTTTCCTCTTATACCTCTTTGGCCTCTTTACATTGGCATTTGAGAATGCAAGGAGAGCCTTCAGAACCATAAAACCAGCAAGAGTTGGACATGCCATCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

403

Amino Acids

44.5

Weight (kDa)

9.07

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 36 - 304 1.7e-21 alpha/beta hydrolase fold
Hydrolase_4 PF12146 82 - 207 5.7e-10 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 82 - 311 9.1e-10 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 439
AccBSI CCGCTC 1 cut(s) 771
AccI GTMKAC 1 cut(s) 579
AccII CGCG 3 cut(s) 20, 38, 93
AclWI GGATC 4 cut(s) 369, 621, 634, 760
AcoI YGGCCR 1 cut(s) 88
AcsI RAATTY 4 cut(s) 450, 645, 991, 1029
AcuI CTGAAG 2 cut(s) 939, 1150
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 2 cut(s) 86, 1051
AfiI CCNNNNNNNGG 3 cut(s) 202, 283, 1059
AgsI TTSAA 1 cut(s) 761
AhlI ACTAGT 1 cut(s) 1046
AluBI AGCT 8 cut(s) 52, 294, 410, 419, 856, 935, 946, 1099
AluI AGCT 8 cut(s) 52, 294, 410, 419, 856, 935, 946, 1099
Alw21I GWGCWC 1 cut(s) 296
Alw26I GTCTC 1 cut(s) 835
AlwI GGATC 4 cut(s) 369, 621, 634, 760
AlwNI CAGNNNCTG 1 cut(s) 166
AoxI GGCC 4 cut(s) 88, 163, 712, 1126
ApeKI GCWGC 3 cut(s) 206, 431, 856
ApoI RAATTY 4 cut(s) 450, 645, 991, 1029
AspLEI GCGC 1 cut(s) 266
AspS9I GGNCC 6 cut(s) 95, 106, 149, 163, 174, 712
AsuC2I CCSGG 3 cut(s) 278, 685, 888
AsuII TTCGAA 2 cut(s) 492, 1092
AvaII GGWCC 4 cut(s) 95, 106, 149, 174
BaeGI GKGCMC 1 cut(s) 444
BamHI GGATCC 1 cut(s) 626
BanI GGYRCC 1 cut(s) 439
BanII GRGCYC 1 cut(s) 296
BauI CACGAG 2 cut(s) 142, 908
BbsI GAAGAC 1 cut(s) 382
Bbv12I GWGCWC 1 cut(s) 296
BbvI GCAGC 3 cut(s) 218, 443, 843
BccI CCATC 3 cut(s) 305, 352, 1208
BceAI ACGGC 1 cut(s) 103
BcgI CGANNNNNNTGC 2 cut(s) 1072, 1106
BclI TGATCA 1 cut(s) 948
BcnI CCSGG 3 cut(s) 278, 685, 888
BcoDI GTCTC 1 cut(s) 835
BcuI ACTAGT 1 cut(s) 1046
BfaI CTAG 2 cut(s) 899, 1047
BfmI CTRYAG 1 cut(s) 576
BglII AGATCT 1 cut(s) 880
BlpI GCTNAGC 1 cut(s) 772
Bme1390I CCNGG 3 cut(s) 278, 685, 888
Bme18I GGWCC 4 cut(s) 95, 106, 149, 174
BmgT120I GGNCC 6 cut(s) 95, 106, 149, 163, 174, 712
BmiI GGNNCC 4 cut(s) 150, 175, 441, 628
BmrFI CCNGG 3 cut(s) 278, 685, 888
BmrI ACTGGG 1 cut(s) 438
BmsI GCATC 6 cut(s) 261, 334, 678, 735, 868, 904
BmuI ACTGGG 1 cut(s) 438
BpiI GAAGAC 1 cut(s) 382
BpmI CTGGAG 1 cut(s) 394
Bpu10I CCTNAGC 1 cut(s) 561
Bpu1102I GCTNAGC 1 cut(s) 772
Bpu14I TTCGAA 2 cut(s) 492, 1092
BpuEI CTTGAG 1 cut(s) 632
BpuMI CCSGG 3 cut(s) 278, 685, 888
BsaHI GRCGYC 1 cut(s) 45
BsaJI CCNNGG 7 cut(s) 36, 91, 102, 277, 503, 700, 799
BsaWI WCCGGW 2 cut(s) 479, 1052
Bsc4I CCNNNNNNNGG 3 cut(s) 202, 283, 1059
Bse118I RCCGGY 1 cut(s) 513
Bse1I ACTGG 2 cut(s) 444, 849
Bse3DI GCAATG 3 cut(s) 441, 528, 816
BseDI CCNNGG 7 cut(s) 36, 91, 102, 277, 503, 700, 799
BseGI GGATG 5 cut(s) 297, 349, 693, 795, 859
BseLI CCNNNNNNNGG 3 cut(s) 202, 283, 1059
BseMI GCAATG 3 cut(s) 441, 528, 816
BseMII CTCAG 3 cut(s) 552, 786, 963
BseNI ACTGG 2 cut(s) 444, 849
BseRI GAGGAG 2 cut(s) 101, 498
BseSI GKGCMC 1 cut(s) 444
BseX3I CGGCCG 1 cut(s) 88
BseXI GCAGC 3 cut(s) 218, 443, 843
BsgI GTGCAG 1 cut(s) 1102
Bsh1236I CGCG 3 cut(s) 20, 38, 93
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 4 cut(s) 90, 165, 714, 1128
BshNI GGYRCC 1 cut(s) 439
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 1 cut(s) 296
BsiSI CCGG 7 cut(s) 60, 277, 480, 514, 684, 888, 1053
BsiWI CGTACG 1 cut(s) 84
BslFI GGGAC 2 cut(s) 145, 187
BslI CCNNNNNNNGG 3 cut(s) 202, 283, 1059
BsmAI GTCTC 1 cut(s) 835
BsmFI GGGAC 2 cut(s) 145, 187
BsmI GAATGC 3 cut(s) 37, 397, 1156
BsnI GGCC 4 cut(s) 90, 165, 714, 1128
Bsp119I TTCGAA 2 cut(s) 492, 1092
Bsp1286I GDGCHC 2 cut(s) 296, 444
Bsp143I GATC 5 cut(s) 361, 626, 765, 880, 948
Bsp1720I GCTNAGC 1 cut(s) 772
Bsp19I CCATGG 2 cut(s) 700, 799
BspANI GGCC 4 cut(s) 90, 165, 714, 1128
BspCNI CTCAG 3 cut(s) 553, 785, 964
BspFNI CGCG 3 cut(s) 20, 38, 93
BspLI GGNNCC 4 cut(s) 150, 175, 441, 628
BspPI GGATC 4 cut(s) 369, 621, 634, 760
BspT104I TTCGAA 2 cut(s) 492, 1092
BspT107I GGYRCC 1 cut(s) 439
BsrBI CCGCTC 1 cut(s) 771
BsrDI GCAATG 3 cut(s) 441, 528, 816
BsrFI RCCGGY 1 cut(s) 513
BsrI ACTGG 2 cut(s) 444, 849
BssAI RCCGGY 1 cut(s) 513
BssECI CCNNGG 7 cut(s) 36, 91, 102, 277, 503, 700, 799
BssMI GATC 5 cut(s) 361, 626, 765, 880, 948
BssNI GRCGYC 1 cut(s) 45
BssSI CACGAG 2 cut(s) 142, 908
BssT1I CCWWGG 4 cut(s) 102, 503, 700, 799
Bst2BI CACGAG 2 cut(s) 142, 908
Bst4CI ACNGT 1 cut(s) 178
Bst6I CTCTTC 1 cut(s) 915
BstACI GRCGYC 1 cut(s) 45
BstAPI GCANNNNNTGC 1 cut(s) 344
BstBI TTCGAA 2 cut(s) 492, 1092
BstC8I GCNNGC 3 cut(s) 421, 727, 806
BstDEI CTNAG 3 cut(s) 561, 772, 972
BstDSI CCRYGG 4 cut(s) 36, 91, 700, 799
BstF5I GGATG 5 cut(s) 297, 349, 693, 795, 859
BstFNI CGCG 3 cut(s) 20, 38, 93
BstHHI GCGC 1 cut(s) 266
BstKTI GATC 5 cut(s) 364, 629, 768, 883, 951
BstMAI GTCTC 1 cut(s) 835
BstMBI GATC 5 cut(s) 361, 626, 765, 880, 948
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 8 cut(s) 44, 209, 249, 344, 416, 514, 962, 1160
BstNSI RCATGY 2 cut(s) 729, 1199
BstSCI CCNGG 3 cut(s) 276, 683, 886
BstSFI CTRYAG 1 cut(s) 576
BstSLI GKGCMC 1 cut(s) 444
BstUI CGCG 3 cut(s) 20, 38, 93
BstV1I GCAGC 3 cut(s) 218, 443, 843
BstV2I GAAGAC 1 cut(s) 382
BstX2I RGATCY 2 cut(s) 626, 880
BstXI CCANNNNNNTGG 1 cut(s) 984
BstYI RGATCY 2 cut(s) 626, 880
BstZI CGGCCG 1 cut(s) 88
BsuRI GGCC 4 cut(s) 90, 165, 714, 1128
BtgI CCRYGG 4 cut(s) 36, 91, 700, 799
BtsCI GGATG 5 cut(s) 297, 349, 693, 795, 859
BtsI GCAGTG 1 cut(s) 1090
BtsIMutI CAGTG 1 cut(s) 1090
Cac8I GCNNGC 3 cut(s) 421, 727, 806
CaiI CAGNNNCTG 1 cut(s) 166
CfoI GCGC 1 cut(s) 266
Cfr10I RCCGGY 1 cut(s) 513
Cfr13I GGNCC 6 cut(s) 95, 106, 149, 163, 174, 712
Cfr42I CCGCGG 2 cut(s) 39, 94
CseI GACGC 4 cut(s) 9, 53, 142, 742
Csp6I GTAC 2 cut(s) 85, 1050
CviAII CATG 8 cut(s) 283, 386, 701, 726, 800, 809, 1078, 1196
CviQI GTAC 2 cut(s) 85, 1050
DdeI CTNAG 3 cut(s) 561, 772, 972
DpnI GATC 5 cut(s) 363, 628, 767, 882, 950
DpnII GATC 5 cut(s) 361, 626, 765, 880, 948
EaeI YGGCCR 1 cut(s) 88
EagI CGGCCG 1 cut(s) 88
Eam1104I CTCTTC 1 cut(s) 915
EarI CTCTTC 1 cut(s) 915
EciI GGCGGA 1 cut(s) 56
Ecl136II GAGCTC 1 cut(s) 294
EclXI CGGCCG 1 cut(s) 88
Eco130I CCWWGG 4 cut(s) 102, 503, 700, 799
Eco24I GRGCYC 1 cut(s) 296
Eco32I GATATC 1 cut(s) 608
Eco47I GGWCC 4 cut(s) 95, 106, 149, 174
Eco52I CGGCCG 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 294
Eco57I CTGAAG 2 cut(s) 939, 1150
EcoICRI GAGCTC 1 cut(s) 294
EcoO109I RGGNCCY 2 cut(s) 106, 163
EcoRI GAATTC 1 cut(s) 450
EcoRV GATATC 1 cut(s) 608
EcoT14I CCWWGG 4 cut(s) 102, 503, 700, 799
EcoT22I ATGCAT 1 cut(s) 727
EcoT38I GRGCYC 1 cut(s) 296
ErhI CCWWGG 4 cut(s) 102, 503, 700, 799
FaeI CATG 8 cut(s) 286, 389, 704, 729, 803, 812, 1081, 1199
FaqI GGGAC 2 cut(s) 145, 187
FatI CATG 8 cut(s) 282, 385, 700, 725, 799, 808, 1077, 1195
FauI CCCGC 1 cut(s) 121
FbaI TGATCA 1 cut(s) 948
FblI GTMKAC 1 cut(s) 579
FokI GGATG 5 cut(s) 284, 356, 700, 782, 846
FriOI GRGCYC 1 cut(s) 296
FspBI CTAG 2 cut(s) 899, 1047
GlaI GCGC 1 cut(s) 265
GsuI CTGGAG 1 cut(s) 394
HaeIII GGCC 4 cut(s) 90, 165, 714, 1128
HapII CCGG 7 cut(s) 60, 277, 480, 514, 684, 888, 1053
HgaI GACGC 4 cut(s) 9, 53, 142, 742
HhaI GCGC 1 cut(s) 266
Hin1I GRCGYC 1 cut(s) 45
Hin1II CATG 8 cut(s) 286, 389, 704, 729, 803, 812, 1081, 1199
Hin6I GCGC 1 cut(s) 264
HinP1I GCGC 1 cut(s) 264
HinfI GANTC 5 cut(s) 63, 140, 380, 556, 904
HpaII CCGG 7 cut(s) 60, 277, 480, 514, 684, 888, 1053
Hpy166II GTNNAC 4 cut(s) 152, 500, 580, 928
Hpy188I TCNGA 6 cut(s) 223, 291, 316, 626, 1043, 1169
Hpy188III TCNNGA 4 cut(s) 560, 611, 656, 908
Hpy8I GTNNAC 4 cut(s) 152, 500, 580, 928
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 5 cut(s) 277, 595, 633, 1052, 1174
HpyCH4III ACNGT 1 cut(s) 178
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 8 cut(s) 347, 353, 423, 691, 725, 859, 1083, 1154
HpyF10VI GCNNNNNNNGC 8 cut(s) 44, 209, 249, 344, 416, 514, 962, 1160
HpyF3I CTNAG 3 cut(s) 561, 772, 972
HpySE526I ACGT 1 cut(s) 83
Hsp92I GRCGYC 1 cut(s) 45
Hsp92II CATG 8 cut(s) 286, 389, 704, 729, 803, 812, 1081, 1199
HspAI GCGC 1 cut(s) 264
Ksp22I TGATCA 1 cut(s) 948
KspI CCGCGG 2 cut(s) 39, 94
Kzo9I GATC 5 cut(s) 361, 626, 765, 880, 948
LmnI GCTCC 5 cut(s) 224, 291, 299, 407, 943
Lsp1109I GCAGC 3 cut(s) 218, 443, 843
LweI GCATC 6 cut(s) 261, 334, 678, 735, 868, 904
MaeI CTAG 2 cut(s) 899, 1047
MaeII ACGT 1 cut(s) 83
MaeIII GTNAC 3 cut(s) 475, 905, 1021
MalI GATC 5 cut(s) 363, 628, 767, 882, 950
MbiI CCGCTC 1 cut(s) 771
MboI GATC 5 cut(s) 361, 626, 765, 880, 948
MboII GAAGA 4 cut(s) 64, 382, 875, 932
MfeI CAATTG 1 cut(s) 348
MflI RGATCY 2 cut(s) 626, 880
MhlI GDGCHC 2 cut(s) 296, 444
MluCI AATT 8 cut(s) 348, 425, 450, 645, 761, 991, 1029, 1065
MlyI GAGTC 3 cut(s) 134, 550, 913
MmeI TCCRAC 4 cut(s) 246, 269, 604, 1171
Mph1103I ATGCAT 1 cut(s) 727
MseI TTAA 2 cut(s) 471, 545
MslI CAYNNNNRTG 1 cut(s) 257
MspA1I CMGCKG 2 cut(s) 38, 93
MspI CCGG 7 cut(s) 60, 277, 480, 514, 684, 888, 1053
MspR9I CCNGG 3 cut(s) 278, 685, 888
MunI CAATTG 1 cut(s) 348
Mva1269I GAATGC 3 cut(s) 37, 397, 1156
MvnI CGCG 3 cut(s) 20, 38, 93
MwoI GCNNNNNNNGC 8 cut(s) 44, 209, 249, 344, 416, 514, 962, 1160
NciI CCSGG 3 cut(s) 278, 685, 888
NcoI CCATGG 2 cut(s) 700, 799
NdeII GATC 5 cut(s) 361, 626, 765, 880, 948
NlaIII CATG 8 cut(s) 286, 389, 704, 729, 803, 812, 1081, 1199
NlaIV GGNNCC 4 cut(s) 150, 175, 441, 628
NmuCI GTSAC 2 cut(s) 475, 905
NsiI ATGCAT 1 cut(s) 727
NspI RCATGY 2 cut(s) 729, 1199
NspV TTCGAA 2 cut(s) 492, 1092
PaeI GCATGC 1 cut(s) 729
PcsI WCGNNNNNNNCGW 1 cut(s) 140
PctI GAATGC 3 cut(s) 37, 397, 1156
PfeI GAWTC 2 cut(s) 63, 380
Pfl23II CGTACG 1 cut(s) 84
PfoI TCCNGGA 1 cut(s) 886
PleI GAGTC 3 cut(s) 134, 550, 912
PpsI GAGTC 3 cut(s) 134, 550, 912
PpuMI RGGWCCY 1 cut(s) 106
Psp124BI GAGCTC 1 cut(s) 296
Psp5II RGGWCCY 1 cut(s) 106
PspLI CGTACG 1 cut(s) 84
PspN4I GGNNCC 4 cut(s) 150, 175, 441, 628
PspPI GGNCC 6 cut(s) 95, 106, 149, 163, 174, 712
PspPPI RGGWCCY 1 cut(s) 106
PstNI CAGNNNCTG 1 cut(s) 166
PsuI RGATCY 2 cut(s) 626, 880
RsaI GTAC 2 cut(s) 86, 1051
RsaNI GTAC 2 cut(s) 85, 1050
RseI CAYNNNNRTG 1 cut(s) 257
SacI GAGCTC 1 cut(s) 296
SacII CCGCGG 2 cut(s) 39, 94
SaqAI TTAA 2 cut(s) 471, 545
Sau3AI GATC 5 cut(s) 361, 626, 765, 880, 948
Sau96I GGNCC 6 cut(s) 95, 106, 149, 163, 174, 712
SchI GAGTC 3 cut(s) 134, 550, 913
ScrFI CCNGG 3 cut(s) 278, 685, 888
SduI GDGCHC 2 cut(s) 296, 444
SfaNI GCATC 6 cut(s) 261, 334, 678, 735, 868, 904
SfcI CTRYAG 1 cut(s) 576
Sfr303I CCGCGG 2 cut(s) 39, 94
SfuI TTCGAA 2 cut(s) 492, 1092
SgrBI CCGCGG 2 cut(s) 39, 94
SinI GGWCC 4 cut(s) 95, 106, 149, 174
SmiMI CAYNNNNRTG 1 cut(s) 257
SmlI CTYRAG 1 cut(s) 611
SmoI CTYRAG 1 cut(s) 611
SpeI ACTAGT 1 cut(s) 1046
SphI GCATGC 1 cut(s) 729
Sse9I AATT 8 cut(s) 348, 425, 450, 645, 761, 991, 1029, 1065
SspMI CTAG 2 cut(s) 899, 1047
SstI GAGCTC 1 cut(s) 296
StyD4I CCNGG 3 cut(s) 276, 683, 886
StyI CCWWGG 4 cut(s) 102, 503, 700, 799
TaaI ACNGT 1 cut(s) 178
TaiI ACGT 1 cut(s) 86
TaqI TCGA 5 cut(s) 255, 270, 492, 599, 1092
TasI AATT 8 cut(s) 348, 425, 450, 645, 761, 991, 1029, 1065
TauI GCSGC 8 cut(s) 28, 38, 41, 93, 206, 212, 246, 575
TfiI GAWTC 2 cut(s) 63, 380
Tru1I TTAA 2 cut(s) 471, 545
Tru9I TTAA 2 cut(s) 471, 545
TscAI CASTG 1 cut(s) 1090
TseFI GTSAC 2 cut(s) 475, 905
TseI GCWGC 3 cut(s) 206, 431, 856
Tsp45I GTSAC 2 cut(s) 475, 905
TspDTI ATGAA 1 cut(s) 1066
TspGWI ACGGA 2 cut(s) 527, 974
TspRI CASTG 1 cut(s) 1090
VpaK11BI GGWCC 4 cut(s) 95, 106, 149, 174
XapI RAATTY 4 cut(s) 450, 645, 991, 1029
XceI RCATGY 2 cut(s) 729, 1199
XmiI GTMKAC 1 cut(s) 579
XspI CTAG 2 cut(s) 899, 1047
Zsp2I ATGCAT 1 cut(s) 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.