MD02G1033900.v1.1

Chaperone protein dnaJ 49-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
2617599 .. 2620371
2773 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1033900.v1.1.491

Sequence Viewer

Length: 1107 bp
ATGGATGGAAACAAAGACGATGCCTTGAAATGCTTCAGAATTGGGAAGGATGCTTTGGAAGCTGGGGATCGAAGCCGTGCCGTAAAATTCCTGACTAAAGCTCGCCGTCTCGATCCGGCGTTGCCCGTCGACGATCTCTTGTCGTCGATTGACGGAAATTGCAATCCTCATTCGGGTTCGGATGCTGGTGGGTCTGCCAATGGGCCATCTGGGTTGGGTTCAGCTAAGCCGTTCGATCAACCATCGGTTCGCCAGAGGGCTACGGCGACTGGGTCTTCGTCACCTAAACCGTCGGCAGCTGCGTCGTACACAGAGGAGCAGATTGCGATGGTGAGACAACTGAAGAAAAAGAAGGATTACTACGAGATTTTGGGGGTGGAAAGGAGTTGCACTGTTGAAGATGTTCGAAAGGCTTATCGAAAACTGTCTTTGAAGGTTCATCCCGATAAGAACAAGGCACCGGGAGCTGAGGAAGCGTTTAAGTCCGTTTCGAAGGCGTTTCAGTGTCTTAGCAATCAAGAGAGCAGGAAAAAGTATGATGTTATGGGCTCAGATGAGCCGGTGTACGAGAGACGTGCTACCAAACATGGAGCACATGGATTTAATGGCTTTAATGGCTTCTATGATGCGGATGTCGATGCCGAGGAGATCTTTAGGAACTTTTTCTTTGGAGGAGGAGGAATGGCTCCGGCAACCCAGTTCCGGGGATTCAGTTTTGGGCACAACGGAATGGGGCAGAGGGGTGGTGACCATGGCTCTGGTGGGTCCAATATCCGGATTCTAATTCAGTTGCTGCCAGTGTTGCTTATTCTGCTTGTCAGCTTCATGCCGTCTTCTGAGCCTATCTATGCTCTTTCGAGGTCCTATCCCTACGAATACCGCGTTACTACGGAGAAGGGTGTGAATTTTTATGTTAAGTCAACCAAGTTTGAGCAAGAGTTCCCGCCAGGTACCTCGGAGCGTGTCAATCTAGAACACCGGGTTGAGAGAGAATTCTTCAACATTCTTTCCCAGAATTGTCGGCTTGAGATGCAGCGCCGCCAGTGGGGATTTATTCGCGAAACACCACATTGTGACATGCTGCAGAAGTTTGAGACTGCAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

369

Amino Acids

40.9

Weight (kDa)

8.86

Isoelectric Point (pI)

49.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 119 - 180 1.8e-24 DnaJ domain
DUF1977 PF09320 276 - 348 1.3e-08 Domain of unknown function (DUF1977)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 950
AccB1I GGYRCC 2 cut(s) 457, 950
AccI GTMKAC 1 cut(s) 129
AccII CGCG 2 cut(s) 882, 1059
AccIII TCCGGA 1 cut(s) 774
AciI CCGC 4 cut(s) 629, 880, 944, 1039
AclWI GGATC 2 cut(s) 75, 107
AcsI RAATTY 3 cut(s) 86, 904, 992
AcuI CTGAAG 2 cut(s) 19, 362
AdeI CACNNNGTG 1 cut(s) 1073
AfaI GTAC 3 cut(s) 308, 566, 952
AfiI CCNNNNNNNGG 5 cut(s) 173, 702, 703, 774, 1045
AgsI TTSAA 4 cut(s) 28, 398, 433, 1000
AjiI CACGTC 1 cut(s) 575
AjnI CCWGG 1 cut(s) 946
AjuI GAANNNNNNNTTGG 2 cut(s) 38, 70
AluBI AGCT 7 cut(s) 62, 101, 224, 299, 467, 822, 1103
AluI AGCT 7 cut(s) 62, 101, 224, 299, 467, 822, 1103
Alw21I GWGCWC 1 cut(s) 595
Alw26I GTCTC 4 cut(s) 113, 328, 565, 1088
AlwI GGATC 2 cut(s) 75, 107
AlwNI CAGNNNCTG 1 cut(s) 793
Aor13HI TCCGGA 1 cut(s) 774
AoxI GGCC 1 cut(s) 203
ApeKI GCWGC 6 cut(s) 296, 299, 793, 1033, 1081, 1100
ApoI RAATTY 3 cut(s) 86, 904, 992
ArsI GACNNNNNNTTYG 2 cut(s) 259, 291
Asp700I GAANNNNTTC 3 cut(s) 32, 402, 662
Asp718I GGTACC 1 cut(s) 950
AspLEI GCGC 1 cut(s) 1038
AspS9I GGNCC 3 cut(s) 203, 765, 861
AsuC2I CCSGG 3 cut(s) 462, 704, 980
AsuHPI GGTGA 3 cut(s) 273, 343, 758
AsuII TTCGAA 2 cut(s) 406, 491
AvaII GGWCC 2 cut(s) 765, 861
BaeGI GKGCMC 1 cut(s) 723
BanI GGYRCC 2 cut(s) 457, 950
BanII GRGCYC 1 cut(s) 551
BarI GAAGNNNNNNTAC 2 cut(s) 344, 376
BbsI GAAGAC 2 cut(s) 267, 825
Bbv12I GWGCWC 1 cut(s) 595
BbvCI CCTCAGC 1 cut(s) 468
BbvI GCAGC 5 cut(s) 286, 308, 780, 1045, 1068
BccI CCATC 3 cut(s) 214, 250, 322
BceAI ACGGC 6 cut(s) 60, 65, 90, 214, 279, 814
BcgI CGANNNNNNTGC 4 cut(s) 285, 319, 557, 591
BciT130I CCWGG 1 cut(s) 948
BcnI CCSGG 3 cut(s) 462, 704, 980
BcoDI GTCTC 4 cut(s) 113, 328, 565, 1088
BfaI CTAG 1 cut(s) 971
BfmI CTRYAG 2 cut(s) 1082, 1098
BfoI RGCGCY 1 cut(s) 1039
BglII AGATCT 1 cut(s) 648
BisI GCNGC 7 cut(s) 297, 300, 794, 1034, 1039, 1082, 1101
BlpI GCTNAGC 1 cut(s) 225
BlsI GCNGC 7 cut(s) 298, 301, 795, 1035, 1040, 1083, 1102
Bme1390I CCNGG 4 cut(s) 462, 704, 948, 980
Bme18I GGWCC 2 cut(s) 765, 861
BmgBI CACGTC 1 cut(s) 575
BmgT120I GGNCC 3 cut(s) 203, 765, 861
BmiI GGNNCC 4 cut(s) 459, 687, 766, 952
BmrFI CCNGG 4 cut(s) 462, 704, 948, 980
BmrI ACTGGG 2 cut(s) 279, 691
BmsI GCATC 6 cut(s) 10, 40, 172, 616, 628, 1020
BmuI ACTGGG 2 cut(s) 279, 691
BpiI GAAGAC 2 cut(s) 267, 825
Bpu10I CCTNAGC 1 cut(s) 468
Bpu1102I GCTNAGC 1 cut(s) 225
Bpu14I TTCGAA 2 cut(s) 406, 491
BpuEI CTTGAG 1 cut(s) 1046
BpuMI CCSGG 3 cut(s) 462, 704, 980
BsaJI CCNNGG 4 cut(s) 642, 703, 751, 954
BsaWI WCCGGW 1 cut(s) 774
Bsc4I CCNNNNNNNGG 5 cut(s) 173, 702, 703, 774, 1045
Bse118I RCCGGY 1 cut(s) 559
Bse1I ACTGG 4 cut(s) 274, 697, 797, 1042
BseAI TCCGGA 1 cut(s) 774
BseBI CCWGG 1 cut(s) 948
BseDI CCNNGG 4 cut(s) 642, 703, 751, 954
BseGI GGATG 5 cut(s) 10, 55, 187, 439, 637
BseLI CCNNNNNNNGG 5 cut(s) 173, 702, 703, 774, 1045
BseMII CTCAG 3 cut(s) 459, 564, 828
BseNI ACTGG 4 cut(s) 274, 697, 797, 1042
BseRI GAGGAG 4 cut(s) 329, 659, 687, 690
BseSI GKGCMC 1 cut(s) 723
BseXI GCAGC 5 cut(s) 286, 308, 780, 1045, 1068
BseYI CCCAGC 1 cut(s) 62
Bsh1236I CGCG 2 cut(s) 882, 1059
BshFI GGCC 1 cut(s) 205
BshNI GGYRCC 2 cut(s) 457, 950
BsiHKAI GWGCWC 1 cut(s) 595
BsiSI CCGG 7 cut(s) 116, 461, 560, 689, 703, 775, 979
BslI CCNNNNNNNGG 5 cut(s) 173, 702, 703, 774, 1045
BsmAI GTCTC 4 cut(s) 113, 328, 565, 1088
BsmBI CGTCTC 2 cut(s) 113, 565
BsnI GGCC 1 cut(s) 205
Bsp119I TTCGAA 2 cut(s) 406, 491
Bsp1286I GDGCHC 3 cut(s) 551, 595, 723
Bsp13I TCCGGA 1 cut(s) 774
Bsp143I GATC 5 cut(s) 67, 112, 133, 235, 648
Bsp1720I GCTNAGC 1 cut(s) 225
Bsp19I CCATGG 1 cut(s) 751
Bsp68I TCGCGA 1 cut(s) 1059
BspACI CCGC 4 cut(s) 629, 880, 944, 1039
BspANI GGCC 1 cut(s) 205
BspCNI CTCAG 3 cut(s) 460, 563, 829
BspEI TCCGGA 1 cut(s) 774
BspFNI CGCG 2 cut(s) 882, 1059
BspLI GGNNCC 4 cut(s) 459, 687, 766, 952
BspMAI CTGCAG 2 cut(s) 1086, 1102
BspPI GGATC 2 cut(s) 75, 107
BspT104I TTCGAA 2 cut(s) 406, 491
BspT107I GGYRCC 2 cut(s) 457, 950
BsrFI RCCGGY 1 cut(s) 559
BsrI ACTGG 4 cut(s) 274, 697, 797, 1042
BssAI RCCGGY 1 cut(s) 559
BssECI CCNNGG 4 cut(s) 642, 703, 751, 954
BssMI GATC 5 cut(s) 67, 112, 133, 235, 648
BssT1I CCWWGG 1 cut(s) 751
Bst2UI CCWGG 1 cut(s) 948
Bst4CI ACNGT 3 cut(s) 291, 394, 426
BstBI TTCGAA 2 cut(s) 406, 491
BstC8I GCNNGC 1 cut(s) 103
BstDEI CTNAG 5 cut(s) 225, 468, 509, 550, 837
BstDSI CCRYGG 1 cut(s) 751
BstEII GGTNACC 1 cut(s) 746
BstF5I GGATG 5 cut(s) 10, 55, 187, 439, 637
BstFNI CGCG 2 cut(s) 882, 1059
BstH2I RGCGCY 1 cut(s) 1039
BstHHI GCGC 1 cut(s) 1038
BstKTI GATC 5 cut(s) 70, 115, 136, 238, 651
BstMAI GTCTC 4 cut(s) 113, 328, 565, 1088
BstMBI GATC 5 cut(s) 67, 112, 133, 235, 648
BstMWI GCNNNNNNNGC 7 cut(s) 59, 464, 473, 615, 802, 811, 1030
BstNI CCWGG 1 cut(s) 948
BstNSI RCATGY 1 cut(s) 1081
BstPI GGTNACC 1 cut(s) 746
BstSCI CCNGG 4 cut(s) 460, 702, 946, 978
BstSFI CTRYAG 2 cut(s) 1082, 1098
BstSLI GKGCMC 1 cut(s) 723
BstUI CGCG 2 cut(s) 882, 1059
BstV1I GCAGC 5 cut(s) 286, 308, 780, 1045, 1068
BstV2I GAAGAC 2 cut(s) 267, 825
BstX2I RGATCY 1 cut(s) 648
BstXI CCANNNNNNTGG 1 cut(s) 758
BstYI RGATCY 1 cut(s) 648
BsuRI GGCC 1 cut(s) 205
BtgI CCRYGG 1 cut(s) 751
BtgZI GCGATG 1 cut(s) 341
BtrI CACGTC 1 cut(s) 575
BtsCI GGATG 5 cut(s) 10, 55, 187, 439, 637
BtsIMutI CAGTG 4 cut(s) 390, 509, 804, 1049
BtuMI TCGCGA 1 cut(s) 1059
Cac8I GCNNGC 1 cut(s) 103
CaiI CAGNNNCTG 1 cut(s) 793
CfoI GCGC 1 cut(s) 1038
Cfr10I RCCGGY 1 cut(s) 559
Cfr13I GGNCC 3 cut(s) 203, 765, 861
CseI GACGC 1 cut(s) 291
Csp6I GTAC 3 cut(s) 307, 565, 951
CviAII CATG 5 cut(s) 587, 596, 752, 826, 1078
CviQI GTAC 3 cut(s) 307, 565, 951
DdeI CTNAG 5 cut(s) 225, 468, 509, 550, 837
DpnI GATC 5 cut(s) 69, 114, 135, 237, 650
DpnII GATC 5 cut(s) 67, 112, 133, 235, 648
DraIII CACNNNGTG 1 cut(s) 1073
Eco130I CCWWGG 1 cut(s) 751
Eco24I GRGCYC 1 cut(s) 551
Eco47I GGWCC 2 cut(s) 765, 861
Eco57I CTGAAG 2 cut(s) 19, 362
Eco91I GGTNACC 1 cut(s) 746
EcoO109I RGGNCCY 1 cut(s) 861
EcoO65I GGTNACC 1 cut(s) 746
EcoRI GAATTC 1 cut(s) 992
EcoRII CCWGG 1 cut(s) 946
EcoT14I CCWWGG 1 cut(s) 751
EcoT38I GRGCYC 1 cut(s) 551
ErhI CCWWGG 1 cut(s) 751
Esp3I CGTCTC 2 cut(s) 113, 565
FaeI CATG 5 cut(s) 590, 599, 755, 829, 1081
FatI CATG 5 cut(s) 586, 595, 751, 825, 1077
FauI CCCGC 1 cut(s) 951
FblI GTMKAC 1 cut(s) 129
Fnu4HI GCNGC 7 cut(s) 297, 300, 794, 1034, 1039, 1082, 1101
FokI GGATG 5 cut(s) 17, 62, 194, 426, 644
FriOI GRGCYC 1 cut(s) 551
Fsp4HI GCNGC 7 cut(s) 297, 300, 794, 1034, 1039, 1082, 1101
FspBI CTAG 1 cut(s) 971
GlaI GCGC 1 cut(s) 1037
GluI GCNGC 7 cut(s) 297, 300, 794, 1034, 1039, 1082, 1101
GsaI CCCAGC 1 cut(s) 66
HaeII RGCGCY 1 cut(s) 1039
HaeIII GGCC 1 cut(s) 205
HapII CCGG 7 cut(s) 116, 461, 560, 689, 703, 775, 979
HgaI GACGC 1 cut(s) 291
HhaI GCGC 1 cut(s) 1038
Hin1II CATG 5 cut(s) 590, 599, 755, 829, 1081
Hin6I GCGC 1 cut(s) 1036
HinP1I GCGC 1 cut(s) 1036
HincII GTYRAC 2 cut(s) 130, 921
HindII GTYRAC 2 cut(s) 130, 921
HinfI GANTC 2 cut(s) 708, 778
HpaII CCGG 7 cut(s) 116, 461, 560, 689, 703, 775, 979
HphI GGTGA 3 cut(s) 273, 343, 758
Hpy166II GTNNAC 4 cut(s) 130, 309, 565, 921
Hpy188I TCNGA 5 cut(s) 38, 181, 553, 838, 958
Hpy188III TCNNGA 7 cut(s) 91, 110, 443, 518, 775, 971, 1058
Hpy8I GTNNAC 4 cut(s) 130, 309, 565, 921
Hpy99I CGWCG 5 cut(s) 131, 134, 148, 295, 307
HpyAV CCTTC 5 cut(s) 40, 346, 427, 487, 889
HpyCH4III ACNGT 3 cut(s) 291, 394, 426
HpyCH4IV ACGT 1 cut(s) 574
HpyCH4V TGCA 5 cut(s) 162, 390, 1033, 1084, 1100
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 464, 473, 615, 802, 811, 1030
HpyF3I CTNAG 5 cut(s) 225, 468, 509, 550, 837
HpySE526I ACGT 1 cut(s) 574
Hsp92II CATG 5 cut(s) 590, 599, 755, 829, 1081
HspAI GCGC 1 cut(s) 1036
Kpn2I TCCGGA 1 cut(s) 774
KpnI GGTACC 1 cut(s) 954
Kzo9I GATC 5 cut(s) 67, 112, 133, 235, 648
LmnI GCTCC 5 cut(s) 316, 464, 590, 691, 958
Lsp1109I GCAGC 5 cut(s) 286, 308, 780, 1045, 1068
LweI GCATC 6 cut(s) 10, 40, 172, 616, 628, 1020
MaeI CTAG 1 cut(s) 971
MaeII ACGT 1 cut(s) 574
MaeIII GTNAC 4 cut(s) 279, 746, 883, 1073
MalI GATC 5 cut(s) 69, 114, 135, 237, 650
MboI GATC 5 cut(s) 67, 112, 133, 235, 648
MboII GAAGA 5 cut(s) 267, 355, 410, 825, 988
MflI RGATCY 1 cut(s) 648
MhlI GDGCHC 3 cut(s) 551, 595, 723
MluCI AATT 7 cut(s) 39, 86, 157, 783, 904, 992, 1015
MroI TCCGGA 1 cut(s) 774
MroXI GAANNNNTTC 3 cut(s) 32, 402, 662
MseI TTAA 5 cut(s) 480, 603, 612, 915, 1105
MspA1I CMGCKG 1 cut(s) 299
MspI CCGG 7 cut(s) 116, 461, 560, 689, 703, 775, 979
MspR9I CCNGG 4 cut(s) 462, 704, 948, 980
MvaI CCWGG 1 cut(s) 948
MvnI CGCG 2 cut(s) 882, 1059
MwoI GCNNNNNNNGC 7 cut(s) 59, 464, 473, 615, 802, 811, 1030
NciI CCSGG 3 cut(s) 462, 704, 980
NcoI CCATGG 1 cut(s) 751
NdeII GATC 5 cut(s) 67, 112, 133, 235, 648
NlaIII CATG 5 cut(s) 590, 599, 755, 829, 1081
NlaIV GGNNCC 4 cut(s) 459, 687, 766, 952
NmeAIII GCCGAG 1 cut(s) 667
NmuCI GTSAC 3 cut(s) 279, 746, 1073
NruI TCGCGA 1 cut(s) 1059
NspI RCATGY 1 cut(s) 1081
NspV TTCGAA 2 cut(s) 406, 491
PcsI WCGNNNNNNNCGW 2 cut(s) 299, 879
PdmI GAANNNNTTC 3 cut(s) 32, 402, 662
PfeI GAWTC 2 cut(s) 708, 778
PflFI GACNNNGTC 1 cut(s) 271
PkrI GCNGC 7 cut(s) 298, 301, 795, 1035, 1040, 1083, 1102
PpuMI RGGWCCY 1 cut(s) 861
Psp5II RGGWCCY 1 cut(s) 861
Psp6I CCWGG 1 cut(s) 946
PspEI GGTNACC 1 cut(s) 746
PspFI CCCAGC 1 cut(s) 62
PspGI CCWGG 1 cut(s) 946
PspN4I GGNNCC 4 cut(s) 459, 687, 766, 952
PspPI GGNCC 3 cut(s) 203, 765, 861
PspPPI RGGWCCY 1 cut(s) 861
PstI CTGCAG 2 cut(s) 1086, 1102
PstNI CAGNNNCTG 1 cut(s) 793
PsuI RGATCY 1 cut(s) 648
PsyI GACNNNGTC 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 299
RruI TCGCGA 1 cut(s) 1059
RsaI GTAC 3 cut(s) 308, 566, 952
RsaNI GTAC 3 cut(s) 307, 565, 951
SalI GTCGAC 1 cut(s) 128
SaqAI TTAA 5 cut(s) 480, 603, 612, 915, 1105
SatI GCNGC 7 cut(s) 297, 300, 794, 1034, 1039, 1082, 1101
Sau3AI GATC 5 cut(s) 67, 112, 133, 235, 648
Sau96I GGNCC 3 cut(s) 203, 765, 861
ScrFI CCNGG 4 cut(s) 462, 704, 948, 980
SduI GDGCHC 3 cut(s) 551, 595, 723
SfaNI GCATC 6 cut(s) 10, 40, 172, 616, 628, 1020
SfcI CTRYAG 2 cut(s) 1082, 1098
SfuI TTCGAA 2 cut(s) 406, 491
SgrDI CGTCGACG 1 cut(s) 128
SinI GGWCC 2 cut(s) 765, 861
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
Sse9I AATT 7 cut(s) 39, 86, 157, 783, 904, 992, 1015
SsiI CCGC 4 cut(s) 629, 880, 944, 1039
SspMI CTAG 1 cut(s) 971
StyD4I CCNGG 4 cut(s) 460, 702, 946, 978
StyI CCWWGG 1 cut(s) 751
TaaI ACNGT 3 cut(s) 291, 394, 426
TaiI ACGT 1 cut(s) 577
TasI AATT 7 cut(s) 39, 86, 157, 783, 904, 992, 1015
TauI GCSGC 1 cut(s) 1041
TfiI GAWTC 2 cut(s) 708, 778
Tru1I TTAA 5 cut(s) 480, 603, 612, 915, 1105
Tru9I TTAA 5 cut(s) 480, 603, 612, 915, 1105
TscAI CASTG 4 cut(s) 397, 509, 804, 1049
TseFI GTSAC 3 cut(s) 279, 746, 1073
TseI GCWGC 6 cut(s) 296, 299, 793, 1033, 1081, 1100
Tsp45I GTSAC 3 cut(s) 279, 746, 1073
TspDTI ATGAA 2 cut(s) 428, 814
TspGWI ACGGA 4 cut(s) 168, 475, 741, 905
TspRI CASTG 4 cut(s) 397, 509, 804, 1049
Tth111I GACNNNGTC 1 cut(s) 271
VpaK11BI GGWCC 2 cut(s) 765, 861
XapI RAATTY 3 cut(s) 86, 904, 992
XbaI TCTAGA 1 cut(s) 970
XceI RCATGY 1 cut(s) 1081
XcmI CCANNNNNNNNNTGG 1 cut(s) 758
XmiI GTMKAC 1 cut(s) 129
XmnI GAANNNNTTC 3 cut(s) 32, 402, 662
XspI CTAG 1 cut(s) 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.