Rh5CG346200

Chaperone protein dnaJ 49-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
39928173 .. 39929472
1300 bp
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UTR
Exon/CDS
Intron
Rh5CG346200.1

Sequence Viewer

Length: 249 bp
ATGGAGACAGGTTCAGCCATGAAAGGTGGGAAAGAAGCTTTAGACAACGGAGATTGCAGCTGTGCCGTAAAGTTTTTGTCTAAAGCTCGTTGTCTTGATCCGTCGTTACCGATCGACGATCTGTTATCGTCGGTTGAGAAAGACTTCGATCCTTTGCCGGCTTCAGATGGCACTAAAACCGTCGACGGGCTGTCCAGGTTGGGTTTGGGTCAGCAAGTGGGTATACGGAGAAGCAAGCTACGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

82

Amino Acids

8.68

Weight (kDa)

6.16

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 183, 223
AclWI GGATC 2 cut(s) 92, 143
AcuI CTGAAG 1 cut(s) 147
AfiI CCNNNNNNNGG 1 cut(s) 186
AhdI GACNNNNNGTC 1 cut(s) 190
AjnI CCWGG 1 cut(s) 194
AluBI AGCT 4 cut(s) 38, 60, 86, 238
AluI AGCT 4 cut(s) 38, 60, 86, 238
AlwI GGATC 2 cut(s) 92, 143
ApeKI GCWGC 1 cut(s) 57
Asp700I GAANNNNTTC 1 cut(s) 143
BbvI GCAGC 1 cut(s) 69
BccI CCATC 1 cut(s) 161
BceAI ACGGC 1 cut(s) 50
BciT130I CCWGG 1 cut(s) 196
BisI GCNGC 1 cut(s) 58
BlsI GCNGC 1 cut(s) 59
Bme1390I CCNGG 1 cut(s) 196
BmeRI GACNNNNNGTC 1 cut(s) 190
BmrFI CCNGG 1 cut(s) 196
Bsc4I CCNNNNNNNGG 1 cut(s) 186
Bse118I RCCGGY 1 cut(s) 157
BseBI CCWGG 1 cut(s) 196
BseLI CCNNNNNNNGG 1 cut(s) 186
BseXI GCAGC 1 cut(s) 69
Bsh1285I CGRYCG 1 cut(s) 114
BsiEI CGRYCG 1 cut(s) 114
BsiSI CCGG 1 cut(s) 158
BslI CCNNNNNNNGG 1 cut(s) 186
Bsp143I GATC 4 cut(s) 97, 111, 118, 148
BspPI GGATC 2 cut(s) 92, 143
BsrFI RCCGGY 1 cut(s) 157
BssAI RCCGGY 1 cut(s) 157
BssMI GATC 4 cut(s) 97, 111, 118, 148
BssNAI GTATAC 1 cut(s) 224
Bst1107I GTATAC 1 cut(s) 224
Bst2UI CCWGG 1 cut(s) 196
Bst4CI ACNGT 1 cut(s) 181
BstC8I GCNNGC 2 cut(s) 159, 236
BstKTI GATC 4 cut(s) 100, 114, 121, 151
BstMBI GATC 4 cut(s) 97, 111, 118, 148
BstMCI CGRYCG 1 cut(s) 114
BstNI CCWGG 1 cut(s) 196
BstSCI CCNGG 1 cut(s) 194
BstV1I GCAGC 1 cut(s) 69
BstZ17I GTATAC 1 cut(s) 224
Cac8I GCNNGC 2 cut(s) 159, 236
Cfr10I RCCGGY 1 cut(s) 157
CviAII CATG 1 cut(s) 19
CviJI RGCY 7 cut(s) 17, 38, 60, 86, 161, 190, 238
CviKI_1 RGCY 7 cut(s) 17, 38, 60, 86, 161, 190, 238
DpnI GATC 4 cut(s) 99, 113, 120, 150
DpnII GATC 4 cut(s) 97, 111, 118, 148
DriI GACNNNNNGTC 1 cut(s) 190
Eam1105I GACNNNNNGTC 1 cut(s) 190
Eco57I CTGAAG 1 cut(s) 147
EcoRII CCWGG 1 cut(s) 194
FaeI CATG 1 cut(s) 22
FaiI YATR 2 cut(s) 20, 224
FatI CATG 1 cut(s) 18
FblI GTMKAC 2 cut(s) 183, 223
Fnu4HI GCNGC 1 cut(s) 58
Fsp4HI GCNGC 1 cut(s) 58
GluI GCNGC 1 cut(s) 58
HapII CCGG 1 cut(s) 158
Hin1II CATG 1 cut(s) 22
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HindIII AAGCTT 1 cut(s) 36
HpaII CCGG 1 cut(s) 158
Hpy166II GTNNAC 2 cut(s) 184, 224
Hpy188I TCNGA 1 cut(s) 166
Hpy188III TCNNGA 1 cut(s) 95
Hpy8I GTNNAC 2 cut(s) 184, 224
Hpy99I CGWCG 5 cut(s) 106, 119, 133, 185, 188
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4V TGCA 1 cut(s) 57
Hsp92II CATG 1 cut(s) 22
KroI GCCGGC 1 cut(s) 157
KroNI GCCGGC 1 cut(s) 159
Kzo9I GATC 4 cut(s) 97, 111, 118, 148
LpnPI CCDG 3 cut(s) 171, 181, 208
Lsp1109I GCAGC 1 cut(s) 69
MaeIII GTNAC 1 cut(s) 105
MalI GATC 4 cut(s) 99, 113, 120, 150
MboI GATC 4 cut(s) 97, 111, 118, 148
MroNI GCCGGC 1 cut(s) 157
MroXI GAANNNNTTC 1 cut(s) 143
MspA1I CMGCKG 1 cut(s) 60
MspI CCGG 1 cut(s) 158
MspR9I CCNGG 1 cut(s) 196
MvaI CCWGG 1 cut(s) 196
NaeI GCCGGC 1 cut(s) 159
NdeII GATC 4 cut(s) 97, 111, 118, 148
NgoMIV GCCGGC 1 cut(s) 157
NlaIII CATG 1 cut(s) 22
PdiI GCCGGC 1 cut(s) 159
PdmI GAANNNNTTC 1 cut(s) 143
PkrI GCNGC 1 cut(s) 59
Ple19I CGATCG 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 194
PspGI CCWGG 1 cut(s) 194
PvuI CGATCG 1 cut(s) 114
PvuII CAGCTG 1 cut(s) 60
SalI GTCGAC 1 cut(s) 182
SatI GCNGC 1 cut(s) 58
Sau3AI GATC 4 cut(s) 97, 111, 118, 148
ScrFI CCNGG 1 cut(s) 196
SetI ASST 7 cut(s) 13, 28, 40, 62, 88, 200, 240
SgeI CNNG 9 cut(s) 21, 31, 99, 107, 170, 199, 207, 208, 227
SgrDI CGTCGACG 1 cut(s) 182
StyD4I CCNGG 1 cut(s) 194
TaaI ACNGT 1 cut(s) 181
TaqI TCGA 3 cut(s) 114, 147, 183
TseI GCWGC 1 cut(s) 57
TspDTI ATGAA 1 cut(s) 35
TspGWI ACGGA 3 cut(s) 63, 90, 241
XcmI CCANNNNNNNNNTGG 1 cut(s) 202
XmiI GTMKAC 2 cut(s) 183, 223
XmnI GAANNNNTTC 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.